View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4049_low_26 (Length: 257)

Name: NF4049_low_26
Description: NF4049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4049_low_26
NF4049_low_26
[»] chr6 (45 HSPs)
chr6 (137-253)||(25096552-25096668)
chr6 (1-80)||(9024145-9024224)
chr6 (1-80)||(12696335-12696414)
chr6 (1-58)||(9025485-9025542)
chr6 (1-53)||(29049896-29049946)
chr6 (1-45)||(7569172-7569216)
chr6 (1-49)||(13364705-13364753)
chr6 (1-47)||(7265595-7265641)
chr6 (1-78)||(3398630-3398706)
chr6 (1-58)||(7086806-7086863)
chr6 (1-54)||(15443706-15443759)
chr6 (2-47)||(20518357-20518402)
chr6 (1-54)||(20576628-20576681)
chr6 (2-55)||(26562701-26562754)
chr6 (4-80)||(17327624-17327700)
chr6 (1-41)||(19040363-19040403)
chr6 (1-41)||(34446576-34446616)
chr6 (1-40)||(1532251-1532290)
chr6 (1-52)||(9195751-9195802)
chr6 (2-41)||(11591878-11591917)
chr6 (1-47)||(7151423-7151469)
chr6 (1-47)||(9617445-9617491)
chr6 (1-47)||(9629394-9629440)
chr6 (1-39)||(13360382-13360420)
chr6 (1-47)||(14721252-14721298)
chr6 (1-75)||(24138437-24138511)
chr6 (1-47)||(26178683-26178729)
chr6 (1-47)||(32511668-32511714)
chr6 (1-47)||(33340947-33340993)
chr6 (1-55)||(34073341-34073395)
chr6 (1-47)||(35125105-35125151)
chr6 (2-47)||(7377991-7378036)
chr6 (4-76)||(7942269-7942342)
chr6 (2-55)||(8931596-8931649)
chr6 (3-47)||(4420181-4420225)
chr6 (2-54)||(8590807-8590859)
chr6 (1-41)||(10157995-10158035)
chr6 (1-65)||(10770658-10770722)
chr6 (1-41)||(10842543-10842583)
chr6 (1-41)||(12235527-12235567)
chr6 (1-41)||(13851747-13851787)
chr6 (1-57)||(19312747-19312803)
chr6 (1-52)||(28862132-28862184)
chr6 (1-41)||(30866152-30866192)
chr6 (1-41)||(34895042-34895082)
[»] chr1 (37 HSPs)
chr1 (1-80)||(1486678-1486757)
chr1 (1-55)||(44482241-44482295)
chr1 (1-58)||(20157341-20157398)
chr1 (1-49)||(1864880-1864928)
chr1 (1-53)||(6427361-6427413)
chr1 (1-55)||(21038094-21038148)
chr1 (1-55)||(25361897-25361951)
chr1 (1-47)||(28674811-28674857)
chr1 (2-47)||(23636051-23636096)
chr1 (1-58)||(34712374-34712431)
chr1 (1-46)||(42325571-42325616)
chr1 (1-41)||(7918219-7918259)
chr1 (1-41)||(17831539-17831579)
chr1 (1-41)||(25098563-25098603)
chr1 (1-53)||(36906008-36906060)
chr1 (1-52)||(10572586-10572637)
chr1 (1-40)||(19324573-19324612)
chr1 (5-52)||(34371728-34371775)
chr1 (1-56)||(44296488-44296542)
chr1 (1-47)||(13436469-13436515)
chr1 (1-55)||(17754322-17754376)
chr1 (1-47)||(27471568-27471614)
chr1 (1-47)||(36878472-36878518)
chr1 (1-47)||(38075972-38076018)
chr1 (1-69)||(38503331-38503403)
chr1 (1-39)||(40181882-40181920)
chr1 (1-55)||(40285648-40285702)
chr1 (1-43)||(42004953-42004995)
chr1 (1-54)||(6612166-6612219)
chr1 (1-49)||(373058-373106)
chr1 (1-41)||(2445881-2445921)
chr1 (1-53)||(9828055-9828107)
chr1 (5-41)||(10233268-10233304)
chr1 (1-41)||(12611977-12612017)
chr1 (1-80)||(19562589-19562669)
chr1 (1-41)||(26238121-26238160)
chr1 (1-41)||(30847728-30847768)
[»] chr7 (44 HSPs)
chr7 (1-55)||(17307904-17307958)
chr7 (1-80)||(5409805-5409884)
chr7 (1-58)||(5233640-5233697)
chr7 (1-50)||(36314626-36314675)
chr7 (1-41)||(4909162-4909202)
chr7 (1-76)||(1433465-1433540)
chr7 (1-80)||(9778511-9778590)
chr7 (1-76)||(21880163-21880233)
chr7 (3-54)||(22602705-22602756)
chr7 (1-52)||(23128658-23128709)
chr7 (1-52)||(44172887-44172938)
chr7 (1-55)||(8160427-8160481)
chr7 (1-55)||(15902833-15902887)
chr7 (1-43)||(23930230-23930272)
chr7 (1-58)||(5548687-5548744)
chr7 (1-54)||(7328686-7328739)
chr7 (1-78)||(13770702-13770779)
chr7 (1-58)||(16341507-16341564)
chr7 (10-79)||(32093990-32094059)
chr7 (1-76)||(21138969-21139041)
chr7 (1-41)||(27732247-27732287)
chr7 (1-53)||(27945052-27945104)
chr7 (1-41)||(38134414-38134454)
chr7 (4-47)||(5835261-5835304)
chr7 (1-36)||(7133291-7133326)
chr7 (1-47)||(29787373-29787417)
chr7 (1-32)||(30813823-30813854)
chr7 (1-56)||(31808502-31808557)
chr7 (1-77)||(32308131-32308213)
chr7 (1-52)||(35297669-35297720)
chr7 (1-80)||(43027438-43027517)
chr7 (5-55)||(3142072-3142122)
chr7 (1-47)||(9482945-9482991)
chr7 (1-47)||(20549802-20549848)
chr7 (1-47)||(21247738-21247784)
chr7 (1-58)||(33384573-33384630)
chr7 (1-41)||(12278846-12278886)
chr7 (1-41)||(17851442-17851482)
chr7 (1-41)||(18013082-18013122)
chr7 (1-41)||(18233606-18233646)
chr7 (1-41)||(22868053-22868093)
chr7 (1-29)||(24289831-24289859)
chr7 (4-48)||(38629965-38630009)
chr7 (1-49)||(44020986-44021034)
[»] chr3 (29 HSPs)
chr3 (1-80)||(8039798-8039883)
chr3 (1-80)||(29508455-29508535)
chr3 (1-55)||(16192744-16192798)
chr3 (1-47)||(20691330-20691376)
chr3 (1-58)||(25948878-25948935)
chr3 (2-77)||(5441005-5441078)
chr3 (10-80)||(40993309-40993374)
chr3 (1-54)||(11313795-11313848)
chr3 (1-77)||(45451564-45451635)
chr3 (1-41)||(52369786-52369826)
chr3 (1-52)||(15314873-15314924)
chr3 (6-40)||(4704301-4704335)
chr3 (1-47)||(7928461-7928507)
chr3 (1-47)||(8789552-8789598)
chr3 (1-55)||(9800051-9800105)
chr3 (10-80)||(27505266-27505336)
chr3 (1-47)||(40150573-40150619)
chr3 (2-47)||(6780421-6780466)
chr3 (1-34)||(21149078-21149111)
chr3 (1-41)||(1830354-1830394)
chr3 (1-41)||(3730173-3730213)
chr3 (4-32)||(4990984-4991012)
chr3 (1-53)||(8039217-8039269)
chr3 (1-53)||(11093581-11093633)
chr3 (1-49)||(23271994-23272042)
chr3 (3-47)||(25093515-25093559)
chr3 (8-52)||(29386508-29386552)
chr3 (1-41)||(32804548-32804588)
chr3 (1-41)||(49505162-49505202)
[»] chr5 (38 HSPs)
chr5 (1-54)||(15410443-15410496)
chr5 (1-58)||(38749554-38749611)
chr5 (1-69)||(43001811-43001879)
chr5 (1-60)||(6471878-6471937)
chr5 (1-80)||(39205891-39205970)
chr5 (1-48)||(19737483-19737530)
chr5 (3-74)||(23015964-23016035)
chr5 (1-80)||(30502362-30502436)
chr5 (1-80)||(30542705-30542779)
chr5 (1-52)||(36838554-36838605)
chr5 (1-47)||(2548398-2548444)
chr5 (1-47)||(28296339-28296385)
chr5 (1-58)||(43208265-43208322)
chr5 (1-53)||(3966514-3966566)
chr5 (1-53)||(17593718-17593770)
chr5 (1-41)||(31264449-31264489)
chr5 (1-32)||(6326314-6326345)
chr5 (1-80)||(14873528-14873607)
chr5 (1-80)||(18421815-18421889)
chr5 (1-40)||(24273039-24273078)
chr5 (1-40)||(24389136-24389175)
chr5 (1-32)||(27932246-27932277)
chr5 (1-35)||(2419868-2419902)
chr5 (1-39)||(2577190-2577228)
chr5 (3-41)||(12264837-12264875)
chr5 (1-79)||(21194098-21194171)
chr5 (1-35)||(21194219-21194253)
chr5 (1-47)||(28588676-28588722)
chr5 (3-41)||(41091265-41091303)
chr5 (1-42)||(19293430-19293471)
chr5 (4-41)||(26205768-26205805)
chr5 (1-58)||(38806839-38806896)
chr5 (5-54)||(40211971-40212020)
chr5 (1-41)||(18607105-18607145)
chr5 (1-41)||(19168829-19168869)
chr5 (1-49)||(23220994-23221042)
chr5 (1-41)||(32630743-32630783)
chr5 (2-58)||(41558645-41558701)
[»] chr4 (33 HSPs)
chr4 (1-58)||(18513232-18513289)
chr4 (1-44)||(46180941-46180984)
chr4 (1-57)||(15659752-15659808)
chr4 (1-80)||(36635335-36635415)
chr4 (1-55)||(7012077-7012131)
chr4 (1-47)||(18576039-18576085)
chr4 (1-43)||(20743284-20743326)
chr4 (1-47)||(40783968-40784014)
chr4 (1-77)||(21945514-21945585)
chr4 (1-41)||(24343518-24343558)
chr4 (1-41)||(31243556-31243596)
chr4 (1-37)||(43299983-43300019)
chr4 (1-37)||(43300627-43300663)
chr4 (1-76)||(3947739-3947814)
chr4 (1-40)||(22440609-22440648)
chr4 (1-80)||(29205455-29205529)
chr4 (4-80)||(37496718-37496800)
chr4 (1-39)||(903933-903971)
chr4 (1-47)||(5775360-5775406)
chr4 (1-47)||(15029776-15029822)
chr4 (1-47)||(30103359-30103404)
chr4 (1-47)||(33950147-33950193)
chr4 (10-47)||(15835640-15835677)
chr4 (4-41)||(40613464-40613501)
chr4 (6-55)||(46160912-46160961)
chr4 (1-41)||(5654599-5654639)
chr4 (6-58)||(7970535-7970587)
chr4 (1-41)||(11110214-11110254)
chr4 (1-41)||(14465302-14465342)
chr4 (2-46)||(16189721-16189765)
chr4 (3-55)||(30982872-30982924)
chr4 (1-37)||(37698723-37698759)
chr4 (1-41)||(55941011-55941051)
[»] chr8 (27 HSPs)
chr8 (1-52)||(11803270-11803321)
chr8 (1-46)||(3508063-3508108)
chr8 (1-49)||(7658474-7658522)
chr8 (1-80)||(12559074-12559154)
chr8 (1-55)||(4611545-4611599)
chr8 (1-37)||(13203652-13203688)
chr8 (2-54)||(14634136-14634188)
chr8 (1-41)||(34897096-34897136)
chr8 (1-52)||(11927083-11927134)
chr8 (1-36)||(14513187-14513222)
chr8 (1-47)||(4786340-4786386)
chr8 (1-47)||(12985403-12985449)
chr8 (1-47)||(13844598-13844644)
chr8 (1-47)||(14134710-14134756)
chr8 (1-47)||(18646183-18646229)
chr8 (1-51)||(22493505-22493555)
chr8 (1-39)||(37225753-37225791)
chr8 (1-50)||(7442856-7442905)
chr8 (1-38)||(29198490-29198527)
chr8 (1-46)||(31236580-31236625)
chr8 (1-54)||(33389356-33389409)
chr8 (1-41)||(3025562-3025602)
chr8 (1-53)||(4122245-4122297)
chr8 (1-41)||(14731723-14731763)
chr8 (1-41)||(24362210-24362250)
chr8 (1-41)||(26418350-26418390)
chr8 (1-41)||(28883886-28883926)
[»] scaffold0044 (1 HSPs)
scaffold0044 (1-80)||(53191-53276)
[»] scaffold0024 (1 HSPs)
scaffold0024 (4-58)||(18099-18153)
[»] chr2 (35 HSPs)
chr2 (5-47)||(18889593-18889635)
chr2 (1-74)||(30527570-30527643)
chr2 (11-80)||(41843462-41843531)
chr2 (1-41)||(10535767-10535807)
chr2 (4-40)||(15909641-15909677)
chr2 (1-41)||(18570983-18571023)
chr2 (1-41)||(21616773-21616813)
chr2 (1-80)||(5367203-5367277)
chr2 (1-32)||(23921264-23921295)
chr2 (1-52)||(44860331-44860382)
chr2 (1-47)||(2415328-2415374)
chr2 (1-55)||(12668417-12668471)
chr2 (1-43)||(12748695-12748737)
chr2 (1-39)||(17520080-17520118)
chr2 (1-47)||(34006993-34007039)
chr2 (1-39)||(36281696-36281734)
chr2 (1-47)||(40361756-40361802)
chr2 (1-47)||(42832278-42832324)
chr2 (4-49)||(8300219-8300264)
chr2 (1-42)||(19613620-19613661)
chr2 (1-46)||(23718037-23718082)
chr2 (1-46)||(24105709-24105754)
chr2 (9-58)||(44776618-44776667)
chr2 (2-47)||(45000848-45000893)
chr2 (1-41)||(4229416-4229456)
chr2 (1-41)||(11308012-11308052)
chr2 (1-53)||(18420430-18420482)
chr2 (1-53)||(18622617-18622669)
chr2 (1-41)||(24011047-24011087)
chr2 (1-41)||(25544492-25544532)
chr2 (1-41)||(29970557-29970597)
chr2 (1-41)||(35449524-35449564)
chr2 (1-41)||(37411252-37411292)
chr2 (3-47)||(38355889-38355933)
chr2 (1-49)||(39279686-39279734)
[»] scaffold0123 (1 HSPs)
scaffold0123 (2-55)||(44519-44572)
[»] scaffold0020 (2 HSPs)
scaffold0020 (1-58)||(135303-135360)
scaffold0020 (1-53)||(137791-137843)
[»] scaffold0171 (1 HSPs)
scaffold0171 (10-66)||(23440-23496)
[»] scaffold0022 (1 HSPs)
scaffold0022 (1-53)||(99904-99956)
[»] scaffold0036 (1 HSPs)
scaffold0036 (1-52)||(9744-9795)
[»] scaffold0004 (1 HSPs)
scaffold0004 (1-32)||(92818-92849)
[»] scaffold1528 (1 HSPs)
scaffold1528 (1-55)||(1046-1100)
[»] scaffold0110 (1 HSPs)
scaffold0110 (1-59)||(28861-28919)
[»] scaffold0049 (1 HSPs)
scaffold0049 (1-55)||(56933-56987)
[»] scaffold0011 (1 HSPs)
scaffold0011 (1-47)||(240023-240069)


Alignment Details
Target: chr6 (Bit Score: 93; Significance: 2e-45; HSPs: 45)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 137 - 253
Target Start/End: Original strand, 25096552 - 25096668
Alignment:
Q  137 agttattcaatataacttttgatttgaaacatttttgaattaatttctattacatgatatgatactaatattctaaatcattcacagatgcttgagaatg 236  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||| |||||| |||||| |||||||||| ||||| |||||||||||||||||||||    
T  25096552 agttattcaatataacttttgatttgaaacatttttgaatttatttcaattacaagatatgctactaatattgtaaatgattcacagatgcttgagaatg 25096651  T
Q  237 ctggatttgatgatgtc 253  Q
    |||||||||||||||||    
T  25096652 ctggatttgatgatgtc 25096668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 9024224 - 9024145
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||| |||||||||| |||||||||||||||  |||| |||||||||| |  |||| ||| |||||||||    
T  9024224 taatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgtcgtgtcggacacgggacatatccaacaccggga 9024145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 12696335 - 12696414
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||| ||||||||||||||||||||||| | | ||||  |||| |||||||||| ||||| |||| ||||||||||    
T  12696335 taatttgaaaaaattacataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtctgacaccggga 12696414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 9025542 - 9025485
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||| ||||| ||||    
T  9025542 taatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtccgaca 9025485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29049896 - 29049946
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    ||||||||||||||||||||||||| |||||||  ||||||||||||||||||    
T  29049896 taatttgagaaaattacataattcaatgtaatc--atgtgttggtgttgtgtc 29049946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 7569216 - 7569172
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggt 45  Q
    |||||||||||||||||||||||||||||||| ||| ||||||||    
T  7569216 taatttgagaaaattacataattcagtgtaattataggtgttggt 7569172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13364753 - 13364705
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    |||||||||||||| | |||||||||||||||||||||||| |||||||    
T  13364753 taatttgagaaaatcatataattcagtgtaatcatatgtgtcggtgttg 13364705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7265641 - 7265595
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| ||||||||||||||||| |||||||| |||||    
T  7265641 taatttgagaaaatcacataattcagtgtaattatatgtgtcggtgt 7265595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 3398630 - 3398706
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccgg 78  Q
    |||||||| ||||| | ||||||||||||||| ||| || | ||||| |||| ||||| |||||||||||||||||||    
T  3398630 taatttga-aaaatcatataattcagtgtaattataagtatcggtgtcgtgttggacacgacacatgtccgacaccgg 3398706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 7086806 - 7086863
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| |||||||| |||||||| |||||||| ||||| ||||| ||||    
T  7086806 taatttgagaaaatcacataatttagtgtaattatatgtgtcggtgtagtgtcagaca 7086863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 15443706 - 15443759
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    |||||||||||||| |||||||||| | |||| |||| ||||||||||||||||    
T  15443706 taatttgagaaaataacataattcaatataattatatatgttggtgttgtgtcg 15443759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 20518357 - 20518402
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||||||||| ||||| |||| ||||||||||||||    
T  20518357 aatttgagaaaattacataaatcagtataattatatgtgttggtgt 20518402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 20576681 - 20576628
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    ||||| ||||||||| |||||||||||||||| ||| |||||||||| ||||||    
T  20576681 taattcgagaaaattgcataattcagtgtaattataagtgttggtgtcgtgtcg 20576628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 26562701 - 26562754
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    ||||||||||||| ||||||||||||||||| |||||||| | ||| |||||||    
T  26562701 aatttgagaaaatcacataattcagtgtaattatatgtgtcgatgtcgtgtcgg 26562754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 80
Target Start/End: Complemental strand, 17327700 - 17327624
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    ||||||||||| |||||||| |||||||  ||||||||  |||| |||||||||| ||||| |||| ||||| ||||    
T  17327700 tttgagaaaatcacataatttagtgtaactatatgtgtcagtgtcgtgtcggacacgacacgtgtctgacacaggga 17327624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 19040363 - 19040403
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  19040363 taatttgagaaaatcacataattcagtgtaattatatgtgt 19040403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34446576 - 34446616
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  34446576 taatttgagaaaatgacataattcagtgtaatcataggtgt 34446616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 1532251 - 1532290
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtg 40  Q
    |||||||| ||||||||||||||||||||||| |||||||    
T  1532251 taatttgataaaattacataattcagtgtaattatatgtg 1532290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9195802 - 9195751
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||||||||| |||||||| |||||||| |||||||| ||||| ||||    
T  9195802 taatttgagaaaatgacataatttagtgtaattatatgtgtcggtgtcgtgt 9195751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 2 - 41
Target Start/End: Complemental strand, 11591917 - 11591878
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    ||||||||||||| ||||||||||||||||| ||||||||    
T  11591917 aatttgagaaaatcacataattcagtgtaattatatgtgt 11591878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7151423 - 7151469
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||| ||||| |||||||| |||||||| ||||||||||||||    
T  7151423 taatttgaaaaaatcacataattaagtgtaattatatgtgttggtgt 7151469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9617445 - 9617491
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||||| |||||| |||||||| |||||    
T  9617445 taatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9617491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9629394 - 9629440
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||||| |||||| |||||||| |||||    
T  9629394 taatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 9629440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 13360420 - 13360382
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgt 39  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  13360420 taatttgagaaaatcacataattcagtgtaattatatgt 13360382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14721252 - 14721298
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||| |||||||||||||||||| | |||| ||||||||||||||    
T  14721252 taatttaagaaaattacataattcactataattatatgtgttggtgt 14721298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 75
Target Start/End: Original strand, 24138437 - 24138511
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacac 75  Q
    |||||||| ||||| | |||||| |||||| | |||||| | |||||||||| ||||||||||| |||| |||||    
T  24138437 taatttgaaaaaatcatataattaagtgtatttatatgtatcggtgttgtgttggacatgacacgtgtctgacac 24138511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 26178729 - 26178683
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||| ||||| |||||||| ||||||||||||||||| |||||    
T  26178729 taatttgataaaatcacataatttagtgtaatcatatgtgtcggtgt 26178683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 32511714 - 32511668
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||| ||||||| ||||||||||||||||| ||| ||||||||||    
T  32511714 taatttaagaaaatcacataattcagtgtaattataagtgttggtgt 32511668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 33340993 - 33340947
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||| ||| || ||||||||||||||||||    
T  33340993 taatttgagaaaatcacataactcaatggaatcatatgtgttggtgt 33340947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34073395 - 34073341
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    ||||||||||||||  |||||||||||||||| ||||| || ||||| |||||||    
T  34073395 taatttgagaaaatctcataattcagtgtaattatatgggtcggtgtcgtgtcgg 34073341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 35125105 - 35125151
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||| ||| || ||||||||||||||||||    
T  35125105 taatttgagaaaatcacataactcaatggaatcatatgtgttggtgt 35125151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 7377991 - 7378036
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    ||||||||||||| |||||||||| |||||| |||||||| |||||    
T  7377991 aatttgagaaaatcacataattcaatgtaattatatgtgtcggtgt 7378036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 76
Target Start/End: Original strand, 7942269 - 7942342
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca-tgacacatgtccgacacc 76  Q
    ||||||| ||| |||||||||| |||||||| ||||||  ||| ||||||||||| |||||| |||| ||||||    
T  7942269 tttgagacaatgacataattcaatgtaatcacatgtgtcagtgctgtgtcggacactgacacgtgtcggacacc 7942342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 8931649 - 8931596
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    ||||||||||||| |||||||||||| |||| |||||||| | ||| |||||||    
T  8931649 aatttgagaaaataacataattcagtataattatatgtgtcgatgtcgtgtcgg 8931596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 4420225 - 4420181
Alignment:
Q  3 atttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||| | |||||||||||||| |||| ||||||||||    
T  4420225 atttgagaaaatgatataattcagtgtaaccataggtgttggtgt 4420181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 8590859 - 8590807
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    |||||||||||||||| || ||| |||||||||||||||| | ||| ||||||    
T  8590859 aatttgagaaaattacgtatttcggtgtaatcatatgtgtcgttgtcgtgtcg 8590807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10157995 - 10158035
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||| |||||||| ||||||    
T  10157995 taatttgagaaaatgacataattcaatgtaatcacatgtgt 10158035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 65
Target Start/End: Complemental strand, 10770722 - 10770658
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacaca 65  Q
    |||||||| ||||| ||||||||||||||||| | | |||| ||||| ||||| |||| ||||||    
T  10770722 taatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtcgtgtcagacacgacaca 10770658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 10842543 - 10842583
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  10842543 taatttgaaaaaatcacataatttagtgtaatcatatgtgt 10842583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 12235567 - 12235527
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    ||||| |||||||| ||||||||||||||||||||| ||||    
T  12235567 taattagagaaaatgacataattcagtgtaatcataggtgt 12235527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 13851747 - 13851787
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| || |||||||||||||| ||||||||    
T  13851747 taatttgagaaaataacgtaattcagtgtaattatatgtgt 13851787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 57
Target Start/End: Original strand, 19312747 - 19312803
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggac 57  Q
    |||||| | ||||||||| ||||||  |||||||| ||||||||||| |||||||||    
T  19312747 taattttaaaaaattacaaaattcaaagtaatcatgtgtgttggtgtcgtgtcggac 19312803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 28862132 - 28862184
Alignment:
Q  1 taatttgagaaaattacat-aattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||| ||||| |||| |||||||||||||||||||||| ||||| ||||    
T  28862132 taatttgataaaatgacattaattcagtgtaatcatatgtgtcggtgtcgtgt 28862184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30866192 - 30866152
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||| |||||| ||||||||    
T  30866192 taatttgagaaaatcacataattcaatgtaattatatgtgt 30866152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 34895082 - 34895042
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||||| | ||||||||||||||||| ||||    
T  34895082 taatttgagaaaattatacaattcagtgtaatcataggtgt 34895042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 48; Significance: 2e-18; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 1486757 - 1486678
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||| ||||| ||||||||||||||||| ||| |||| ||||| |||||||||| ||||| |||||||||||||||    
T  1486757 taatttgaaaaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccggga 1486678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 44482241 - 44482295
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||| |||||||    
T  44482241 taatttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcgg 44482295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 20157398 - 20157341
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||| ||||||||| |||||||||||||||||||||||||| ||||| ||||| ||||    
T  20157398 taatgtgagaaaatcacataattcagtgtaatcatatgtgtcggtgtcgtgtccgaca 20157341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 1864928 - 1864880
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    |||||||||||||| ||||||||||||||||| |||||||| |||||||    
T  1864928 taatttgagaaaatcacataattcagtgtaattatatgtgtcggtgttg 1864880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6427361 - 6427413
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||||||||||| |||||||||| |||||| |||||||||||||| |||||    
T  6427361 taatttgagaaaatcacataattcaatgtaattatatgtgttggtgtcgtgtc 6427413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21038094 - 21038148
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||| ||||||||||||||||||||||||||||||| ||  |||| |||||||    
T  21038094 taatttaagaaaattacataattcagtgtaatcatatgcgtcagtgtcgtgtcgg 21038148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 25361897 - 25361951
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||||| ||||||||||||||||| ||||||||  |||| |||||||    
T  25361897 taatttgagaaaatcacataattcagtgtaattatatgtgtcagtgtcgtgtcgg 25361951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28674811 - 28674857
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    ||||||||||||||||||||||||||| |||| |||| |||||||||    
T  28674811 taatttgagaaaattacataattcagtataattatatatgttggtgt 28674857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 23636096 - 23636051
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||||||||||||||||||||  ||||||| |||||    
T  23636096 aatttgagaaaattacataattcagtgtaattgtatgtgtcggtgt 23636051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 34712431 - 34712374
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| |||||||| |||||||| ||||||||  |||| ||||||||||    
T  34712431 taatttgagaaaataacataatttagtgtaattatatgtgtcagtgtcgtgtcggaca 34712374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 42325571 - 42325616
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtg 46  Q
    |||||||||||||| ||||||||||||||||  |||||||||||||    
T  42325571 taatttgagaaaatgacataattcagtgtaacaatatgtgttggtg 42325616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 7918259 - 7918219
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  7918259 taatttgagaaaatcacataattcagtgtaattatatgtgt 7918219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 17831579 - 17831539
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||| |||||||||||||||||||||    
T  17831579 taatttgagaaaatcacattattcagtgtaatcatatgtgt 17831539  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 25098603 - 25098563
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  25098603 taatttgagaaaatcacataattcagtgtaattatatgtgt 25098563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36906008 - 36906060
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||| ||||||||| ||||||||||| ||||| ||||||||||| ||||||||    
T  36906008 taatctgagaaaatcacataattcagagtaattatatgtgttggcgttgtgtc 36906060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 10572637 - 10572586
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||||||||| ||||||||| ||||||| | |||||| ||||||||||    
T  10572637 taatttgagaaaatcacataattcggtgtaattaaatgtgtcggtgttgtgt 10572586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 19324573 - 19324612
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtg 40  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  19324573 taatttgagaaaatcacataattcagtgtaattatatgtg 19324612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 5 - 52
Target Start/End: Original strand, 34371728 - 34371775
Alignment:
Q  5 ttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||||| ||||||||||||||||| |||||||| ||||| ||||    
T  34371728 ttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 34371775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 44296542 - 44296488
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgga 56  Q
    |||||||||||||| |||||||| ||| ||||||||||||| ||||| ||||||||    
T  44296542 taatttgagaaaatgacataatttagt-taatcatatgtgtcggtgtcgtgtcgga 44296488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 13436469 - 13436515
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||| || |||| ||||||||||||||||| ||||||||||||||    
T  13436469 taatttaaggaaatcacataattcagtgtaattatatgtgttggtgt 13436515  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17754322 - 17754376
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||| ||||||||||||||||||||||  ||||||||  |||| |||||||    
T  17754322 taatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 17754376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 27471614 - 27471568
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||  ||||||||||||||||| | ||||||||||||    
T  27471614 taatttgagaaaagcacataattcagtgtaattacatgtgttggtgt 27471568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 36878472 - 36878518
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| ||||||||||||||||| ||| |||| |||||    
T  36878472 taatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 36878518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 38076018 - 38075972
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    ||||||||| |||| |||||| ||||||||||||||||||| |||||    
T  38076018 taatttgagtaaatcacataagtcagtgtaatcatatgtgtcggtgt 38075972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 38503331 - 38503403
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt--tgt--gtcggacatgacacatgtc 69  Q
    |||||||||||||| | ||| ||||||||||| |||||||| |||||  |||  |||||||||||||||||||    
T  38503331 taatttgagaaaatcatatatttcagtgtaattatatgtgtcggtgtcctgtcggtcggacatgacacatgtc 38503403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 40181882 - 40181920
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgt 39  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  40181882 taatttgagaaaatcacataattcagtgtaattatatgt 40181920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 40285702 - 40285648
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    ||||||||||||||  |||||||||||||| |||||||||| | ||| |||||||    
T  40285702 taatttgagaaaatcgcataattcagtgtagtcatatgtgtcgatgtcgtgtcgg 40285648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 42004995 - 42004953
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttg 43  Q
    |||||||||||||| |||||||| |||||||||||| ||||||    
T  42004995 taatttgagaaaatgacataatttagtgtaatcataggtgttg 42004953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 6612219 - 6612166
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    |||||||| ||||||||||||||||||||||| | | |||| ||||| ||||||    
T  6612219 taatttgaaaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtcg 6612166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 373058 - 373106
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    |||||||||||||| |||| ||| ||| ||||||||||||| |||||||    
T  373058 taatttgagaaaatgacatgatttagtttaatcatatgtgtcggtgttg 373106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 2445881 - 2445921
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||| | |||||||||||||    
T  2445881 taatttgagaaaatgacataattcaatttaatcatatgtgt 2445921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9828055 - 9828107
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||||| ||||| |||||||||||||||||  ||||||| ||||| |||||    
T  9828055 taatttgataaaatcacataattcagtgtaattttatgtgtcggtgtcgtgtc 9828107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 5 - 41
Target Start/End: Original strand, 10233268 - 10233304
Alignment:
Q  5 ttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||| ||||||||||||||||| ||||||||    
T  10233268 ttgagaaaatcacataattcagtgtaattatatgtgt 10233304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12611977 - 12612017
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||| ||||| |||||||| |||||||||||||||||    
T  12611977 taatttgaaaaaatcacataattgagtgtaatcatatgtgt 12612017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 19562669 - 19562589
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt-tgtgtcggacatgacacatgtccgacaccggga 80  Q
    ||||||||||||||  |||| ||||||||||| |||||||| |||||  |||||||| |  |||| |||||||||| ||||    
T  19562669 taatttgagaaaatctcatagttcagtgtaattatatgtgtaggtgtcagtgtcggatacaacacgtgtccgacacaggga 19562589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26238160 - 26238121
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  26238160 taatttgagaaaataacataattcagtgtaat-atatgtgt 26238121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 30847768 - 30847728
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||| ||||| |||||||||| |||||||||||||||    
T  30847768 taatttgaaaaaatgacataattcaatgtaatcatatgtgt 30847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 44)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 17307904 - 17307958
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  17307904 taatttgagaaaataacataattcagtgtaattatatgtgttggtgtcgtgtcgg 17307958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5409884 - 5409805
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||| ||||| ||||||||||||| ||| | | |||| ||||| |||||||||| ||||| |||||||||||||||    
T  5409884 taatttgaaaaaatcacataattcagtgcaattacaagtgtcggtgtcgtgtcggacacgacacgtgtccgacaccggga 5409805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5233640 - 5233697
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| |||||||  |||||||| |||||||||||||||||||| ||||    
T  5233640 taatttgagaaaatcacataatctagtgtaattatatgtgttggtgttgtgtccgaca 5233697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 50
Target Start/End: Complemental strand, 36314675 - 36314626
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgt 50  Q
    |||||||||||||| ||||| |||| ||||||||||||||||||||||||    
T  36314675 taatttgagaaaatgacatatttcaatgtaatcatatgtgttggtgttgt 36314626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4909162 - 4909202
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  4909162 taatttgagaaaattacataattcattgtaatcatatgtgt 4909202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 1433465 - 1433540
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 76  Q
    |||||||||||||| |||| |||  ||||||| |||||||| ||||| |||||||||| ||||  |||||||||||    
T  1433465 taatttgagaaaatcacatcatttggtgtaattatatgtgtcggtgtcgtgtcggacaagacatgtgtccgacacc 1433540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 9778511 - 9778590
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||| ||||| |||||||||||| |||| | | |||| ||||| ||||||||||  |||| |||||||||||||||    
T  9778511 taatttgaaaaaatcacataattcagtataattacaagtgtcggtgtcgtgtcggacacaacacgtgtccgacaccggga 9778590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 21880163 - 21880233
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 76  Q
    |||||||||||||||||||||||||||||||| | | |||| |     |||||||||| |||||||||||||||||    
T  21880163 taatttgagaaaattacataattcagtgtaattacaagtgtcg-----gtgtcggacacgacacatgtccgacacc 21880233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 54
Target Start/End: Complemental strand, 22602756 - 22602705
Alignment:
Q  3 atttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    |||||||||||| ||||||||||||||||| |||||||| ||||| ||||||    
T  22602756 atttgagaaaatcacataattcagtgtaattatatgtgtcggtgtcgtgtcg 22602705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 23128709 - 23128658
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||||||||  | |||||||||||||||||||||||| ||||||||||    
T  23128709 taatttgagaaaaccatataattcagtgtaatcatatgtgtcggtgttgtgt 23128658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 44172938 - 44172887
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||||||||| |||||||||| |||||||| ||||||| |||||||||    
T  44172938 taatttgagaaaatgacataattcaatgtaatcacatgtgtttgtgttgtgt 44172887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 8160427 - 8160481
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||| |||||||||||||||| |||||||| |||||||||||| | |||||||    
T  8160427 taatttaagaaaattacataatttagtgtaattatatgtgttggtatcgtgtcgg 8160481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15902833 - 15902887
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||| ||||| |||||||| |||||||| |||||||| |||||||||||||    
T  15902833 taatttgataaaatcacataatttagtgtaattatatgtgtcggtgttgtgtcgg 15902887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 23930230 - 23930272
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttg 43  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  23930230 taatttgagaaaatgacataattcagtgtaatcataggtgttg 23930272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 5548687 - 5548744
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| | ||||||||||||||| ||||||||  |||| ||||||||||    
T  5548687 taatttgagaaaatcaaataattcagtgtaattatatgtgtcagtgtcgtgtcggaca 5548744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 7328739 - 7328686
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    |||||||||||||| |||||||| |||||||| |||||||| ||||| ||||||    
T  7328739 taatttgagaaaataacataatttagtgtaattatatgtgtcggtgtcgtgtcg 7328686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 78
Target Start/End: Original strand, 13770702 - 13770779
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccgg 78  Q
    |||||| | ||||||||||||||||||||||| | | |||| | ||| ||||||||||  |||| |||||||||||||    
T  13770702 taatttaaaaaaattacataattcagtgtaattacaagtgtcgttgtcgtgtcggacacaacacgtgtccgacaccgg 13770779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Original strand, 16341507 - 16341564
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| |||||||| |||||||| |||||||  ||||| ||||||||||    
T  16341507 taatttgagaaaatcacataattaagtgtaattatatgtgccggtgtcgtgtcggaca 16341564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 10 - 79
Target Start/End: Complemental strand, 32094059 - 32093990
Alignment:
Q  10 aaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggg 79  Q
    ||||| ||||||||||||||||| | |  ||| ||||| |||||||||| ||||| ||||||||||||||    
T  32094059 aaaatcacataattcagtgtaattacaaatgtcggtgtcgtgtcggacacgacacgtgtccgacaccggg 32093990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 21139041 - 21138969
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 76  Q
    ||||||||||||||  ||||||| | |||||| |||||||| ||||| ||||||||||||| || |||||||||||    
T  21139041 taatttgagaaaat--cataatt-actgtaattatatgtgtcggtgtcgtgtcggacatgatacgtgtccgacacc 21138969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 27732287 - 27732247
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||| ||||||||||||||||||||||||| ||||||||    
T  27732287 taatttaagaaaattacataattcagtgtaattatatgtgt 27732247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 27945052 - 27945104
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||||||||||||||||||||||||||||| | | |||| ||||| |||||    
T  27945052 taatttgagaaaattacataattcagtgtaattacaagtgtcggtgtcgtgtc 27945104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 38134454 - 38134414
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  38134454 taatttgagaaaatgacataattcaatgtaatcatatgtgt 38134414  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 47
Target Start/End: Original strand, 5835261 - 5835304
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    ||||||||||| ||||||||||||||||| |||||||| |||||    
T  5835261 tttgagaaaataacataattcagtgtaattatatgtgtcggtgt 5835304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 7133326 - 7133291
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcata 36  Q
    |||||||||||||| |||||||||||||||||||||    
T  7133326 taatttgagaaaatgacataattcagtgtaatcata 7133291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 29787417 - 29787373
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||||||||||||  |||||||||||||    
T  29787417 taatttgagaaaatcacataattcagtgtaat--tatgtgttggtgt 29787373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 30813823 - 30813854
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaat 32  Q
    ||||||||||||||||||||||||||||||||    
T  30813823 taatttgagaaaattacataattcagtgtaat 30813854  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 56
Target Start/End: Complemental strand, 31808557 - 31808502
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgga 56  Q
    |||||||||||||| ||| || ||| |||||||| |||||||||||| ||||||||    
T  31808557 taatttgagaaaatgacacaagtcaatgtaatcacatgtgttggtgtcgtgtcgga 31808502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 32308131 - 32308213
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc------ggacatgacacatgtccgacaccg 77  Q
    |||||||||||||| |||||||||||||||||  |||||||  |||| |||||      ||||| ||||||||||||||||||    
T  32308131 taatttgagaaaatcacataattcagtgtaattgtatgtgtcagtgtcgtgtcggtgttggacacgacacatgtccgacaccg 32308213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 35297720 - 35297669
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||||||||| |||||||||| | |||| |||||||||||||| ||||    
T  35297720 taatttgagaaaatcacataattcattataattatatgtgttggtgtcgtgt 35297669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 43027517 - 43027438
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||| ||||| ||||||| ||||||||  | | |||| ||||| ||||| |||| ||||| |||||||||||||||    
T  43027517 taatttgaaaaaatcacataatgcagtgtaaatacaagtgtcggtgtcgtgtcagacacgacacgtgtccgacaccggga 43027438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 5 - 55
Target Start/End: Complemental strand, 3142122 - 3142072
Alignment:
Q  5 ttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    ||||| |||| | |||||||| ||||||||||||||| |||||||||||||    
T  3142122 ttgagtaaatcatataattcaatgtaatcatatgtgtcggtgttgtgtcgg 3142072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 9482945 - 9482991
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| ||| ||||||||||||| |||||||| |||||    
T  9482945 taatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 9482991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20549802 - 20549848
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| || |||||||||||||| |||||||| |||||    
T  20549802 taatttgagaaaatcacgtaattcagtgtaattatatgtgtcggtgt 20549848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 21247784 - 21247738
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| || ||||||| ||||||||| |||||||||||    
T  21247784 taatttgagaaaatgacgtaattcaatgtaatcatgtgtgttggtgt 21247738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 33384630 - 33384573
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||| |||||||||   |||||| |||||||| |||||||||||||| ||||||||||    
T  33384630 taatctgagaaaatcctataatttagtgtaattatatgtgttggtgtggtgtcggaca 33384573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 12278846 - 12278886
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||| ||||||| ||||||||||||||||| ||||||||    
T  12278846 taatttaagaaaatgacataattcagtgtaattatatgtgt 12278886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 17851442 - 17851482
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||| ||||||| ||||||||||||||||| ||||||||    
T  17851442 taattttagaaaatcacataattcagtgtaattatatgtgt 17851482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18013122 - 18013082
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||| | ||||||||||||||||||||||| ||||||||    
T  18013122 taatttaaaaaaattacataattcagtgtaattatatgtgt 18013082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18233646 - 18233606
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||| ||| ||||    
T  18233646 taatttgagaaaatgacataattcagtgtaattataggtgt 18233606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 22868053 - 22868093
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||| ||||||||| ||||||||||||||||| ||||||||    
T  22868053 taatatgagaaaatcacataattcagtgtaattatatgtgt 22868093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 29
Target Start/End: Original strand, 24289831 - 24289859
Alignment:
Q  1 taatttgagaaaattacataattcagtgt 29  Q
    |||||||||||||||||||||||||||||    
T  24289831 taatttgagaaaattacataattcagtgt 24289859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 48
Target Start/End: Original strand, 38629965 - 38630009
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 48  Q
    ||||||||||| ||||||||| ||||||| |||||||| ||||||    
T  38629965 tttgagaaaatgacataattctgtgtaataatatgtgtaggtgtt 38630009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 44020986 - 44021034
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    |||||||| |||||||||||||||| ||||| ||||| ||| |||||||    
T  44020986 taatttgaaaaaattacataattcaatgtaaccatatctgtcggtgttg 44021034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 29)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 8039883 - 8039798
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt------tgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||||| ||||||||||||||| |||||||| |||||       ||||||||||||| ||||||||||||||||||    
T  8039883 taatttgagaaaattatataattcagtgtaattatatgtgtcggtgtcgtgtcggtgtcggacatgagacatgtccgacaccggga 8039798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29508455 - 29508535
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt-gtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||| ||||| | ||||||||||||||| |||||||| | |||| |||||||||| |||||| ||||||||||||||    
T  29508455 taatttgaaaaaatcatataattcagtgtaattatatgtgtcgatgttggtgtcggacacgacacacgtccgacaccggga 29508535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 16192798 - 16192744
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||||| ||||||||||||||||| |||||||||| ||| |||||||    
T  16192798 taatttgagaaaataacataattcagtgtaattatatgtgttgatgtcgtgtcgg 16192744  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 20691330 - 20691376
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||||||||||||||||||||| |||||    
T  20691330 taatttgagaaaatgacataattcagtgtaatcatatgtgtcggtgt 20691376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 25948935 - 25948878
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||| ||||| ||||||||||||||||| ||| |||||||||| ||||||||||    
T  25948935 taatttgaaaaaatcacataattcagtgtaattataagtgttggtgtcgtgtcggaca 25948878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 2 - 77
Target Start/End: Complemental strand, 5441078 - 5441005
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccg 77  Q
    ||||||||||||| |||||||||| || |||  ||||||| ||||||||||| |||| ||||||||||| ||||||    
T  5441078 aatttgagaaaatcacataattcaatggaat--tatgtgtcggtgttgtgtcagacacgacacatgtccaacaccg 5441005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 10 - 80
Target Start/End: Complemental strand, 40993374 - 40993309
Alignment:
Q  10 aaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    ||||| ||||||||||||||||| |||||||| |     |||||||||| |||||||||||||||||||||    
T  40993374 aaaatcacataattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacaccggga 40993309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 11313848 - 11313795
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    |||||||||||||| |||||||| |||||||| ||||||||| |||| ||||||    
T  11313848 taatttgagaaaatcacataatttagtgtaattatatgtgttagtgtcgtgtcg 11313795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 45451564 - 45451635
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccg 77  Q
    |||||||||||||| ||||| |||||| |||| |||||||| |     |||||||||| ||||||||||||||||||    
T  45451564 taatttgagaaaatcacatacttcagtataataatatgtgtcg-----gtgtcggacacgacacatgtccgacaccg 45451635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 52369786 - 52369826
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    ||||||||||||||||||||||||| |||||||||| ||||    
T  52369786 taatttgagaaaattacataattcaatgtaatcataggtgt 52369826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 15314924 - 15314873
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||| ||||| |||||||| |||||||| |||||||||||||| ||||    
T  15314924 taatttgaaaaaatcacataatttagtgtaattatatgtgttggtgtcgtgt 15314873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 6 - 40
Target Start/End: Complemental strand, 4704335 - 4704301
Alignment:
Q  6 tgagaaaattacataattcagtgtaatcatatgtg 40  Q
    ||||||||| |||||||||||||||||||||||||    
T  4704335 tgagaaaatgacataattcagtgtaatcatatgtg 4704301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 7928461 - 7928507
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||| ||||| ||||||||||||||||| |||||||| |||||    
T  7928461 taatttgaaaaaatcacataattcagtgtaattatatgtgtcggtgt 7928507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 8789598 - 8789552
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| ||||||||| ||||||| |||||||| |||||    
T  8789598 taatttgagaaaatcacataattccgtgtaattatatgtgtcggtgt 8789552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 9800051 - 9800105
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||||||||||||||| |||||||  || |||| ||||| |||||||    
T  9800051 taatttgagaaaattacataattccgtgtaattgtaagtgtcggtgtcgtgtcgg 9800105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 10 - 80
Target Start/End: Original strand, 27505266 - 27505336
Alignment:
Q  10 aaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    ||||| |||||||| |||||||| | | |||| ||||| ||||| |||| ||||| |||||||||||||||    
T  27505266 aaaatcacataattaagtgtaattacaagtgtcggtgtcgtgtctgacacgacacgtgtccgacaccggga 27505336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40150619 - 40150573
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| | |||||||| ||||||||||||||| |||||    
T  40150619 taatttgagaaaatgatataattcaatgtaatcatatgtgtcggtgt 40150573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 6780466 - 6780421
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    ||||||||||||| || || ||||||||||| ||||||||||||||    
T  6780466 aatttgagaaaatcacgtagttcagtgtaattatatgtgttggtgt 6780421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 21149078 - 21149111
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatca 34  Q
    |||||||||||||| |||||||||||||||||||    
T  21149078 taatttgagaaaatgacataattcagtgtaatca 21149111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 1830354 - 1830394
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||| ||||||| ||||||||||||||||||||| ||||    
T  1830354 taatttaagaaaatgacataattcagtgtaatcataggtgt 1830394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 3730213 - 3730173
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||| ||| ||||||||||||||||||||| ||||    
T  3730213 taatttgagataatgacataattcagtgtaatcataggtgt 3730173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 4 - 32
Target Start/End: Complemental strand, 4991012 - 4990984
Alignment:
Q  4 tttgagaaaattacataattcagtgtaat 32  Q
    |||||||||||||||||||||||||||||    
T  4991012 tttgagaaaattacataattcagtgtaat 4990984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8039217 - 8039269
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    ||||||||||||||  ||| ||||| |||||||||| |||| |||||||||||    
T  8039217 taatttgagaaaatggcatgattcaatgtaatcataggtgtcggtgttgtgtc 8039269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 11093581 - 11093633
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||||| ||||| ||||||||||  ||||||| |||||||||||| |||||    
T  11093581 taatttgaaaaaatgacataattcaaagtaatcagatgtgttggtgtcgtgtc 11093633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 23272042 - 23271994
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    |||||||||||| | |||||||| | ||||||||||||||| |||||||    
T  23272042 taatttgagaaactgacataattgaatgtaatcatatgtgtcggtgttg 23271994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Original strand, 25093515 - 25093559
Alignment:
Q  3 atttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||| ||| ||||||||||||| |||||||| |||||    
T  25093515 atttgagaaaatcacacaattcagtgtaattatatgtgtcggtgt 25093559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 8 - 52
Target Start/End: Complemental strand, 29386552 - 29386508
Alignment:
Q  8 agaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||| | ||||||||||||||||||||||||| ||||| ||||    
T  29386552 agaaaactgcataattcagtgtaatcatatgtgtcggtgtcgtgt 29386508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32804588 - 32804548
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||| |||||||| ||||||||    
T  32804588 taatttgagaaaatcacataatttagtgtaattatatgtgt 32804548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 49505202 - 49505162
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||| |||||||| ||||||||    
T  49505202 taatttgagaaaatcacataatttagtgtaattatatgtgt 49505162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 38)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 15410496 - 15410443
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    |||||| ||||||||| || ||||||||||||||||||||||||||||||||||    
T  15410496 taatttaagaaaattatatgattcagtgtaatcatatgtgttggtgttgtgtcg 15410443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38749611 - 38749554
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||| ||||| |||||||||| |||||| |||||||||||||||||||||||||    
T  38749611 taatttgaaaaaatgacataattcaatgtaattatatgtgttggtgttgtgtcggaca 38749554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 43001811 - 43001879
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtc 69  Q
    |||||||| ||||||||||||||||||||||| | | ||||||||| ||||||||||| ||||| ||||    
T  43001811 taatttgaaaaaattacataattcagtgtaattacaagtgttggtgatgtgtcggacacgacacgtgtc 43001879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 60
Target Start/End: Complemental strand, 6471937 - 6471878
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatg 60  Q
    |||||||||||||| ||||||||||||||||| |||||||| ||||| |||| |||||||    
T  6471937 taatttgagaaaatcacataattcagtgtaattatatgtgtgggtgtcgtgtgggacatg 6471878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 39205891 - 39205970
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||| | ||||||  ||||||| |||||||||||||| ||||| |||| ||||| || ||||||||||||    
T  39205891 taatttgagaaaatcatataattaggtgtaattatatgtgttggtgtcgtgtccgacacgacacgtgcccgacaccggga 39205970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 19737530 - 19737483
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgtt 48  Q
    ||||||||||||||||||||||||| || |||||||||||| ||||||    
T  19737530 taatttgagaaaattacataattcaatgcaatcatatgtgtcggtgtt 19737483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 74
Target Start/End: Complemental strand, 23016035 - 23015964
Alignment:
Q  3 atttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgaca 74  Q
    |||||||||||| ||||||||||||||||| ||| |||| | |||||| ||||||| ||||  |||||||||    
T  23016035 atttgagaaaatcacataattcagtgtaattataggtgtcgatgttgtatcggacacgacatgtgtccgaca 23015964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30502436 - 30502362
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||| || |||||||||||||| |||||||| |     |||||||||| |||||||||||||||| ||||    
T  30502436 taatttgagaaaatcacttaattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacactggga 30502362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 30542779 - 30542705
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||| || |||||||||||||| |||||||| |     |||||||||| |||||||||||||||| ||||    
T  30542779 taatttgagaaaatcacttaattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatgtccgacactggga 30542705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 36838554 - 36838605
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    ||||||||||||||||||||||| |||||||| |||||||| ||||| ||||    
T  36838554 taatttgagaaaattacataatttagtgtaattatatgtgtcggtgtcgtgt 36838605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2548398 - 2548444
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    ||||| |||||||||||||||||||||||||||||| |||| |||||    
T  2548398 taattagagaaaattacataattcagtgtaatcataagtgtcggtgt 2548444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 28296339 - 28296385
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||||| |||| ||||||||||||||||    
T  28296339 taatttgagaaaatgacataattcaatgtactcatatgtgttggtgt 28296385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 43208322 - 43208265
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| |||||||||| ||||||||||| |||  |||||||||| ||||    
T  43208322 taatttgagaaaatgacataattcaatgtaatcatatctgtctgtgttgtgtcagaca 43208265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3966514 - 3966566
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||||||||||| ||| ||||||||||||| |||||||| ||||| |||||    
T  3966514 taatttgagaaaatcacacaattcagtgtaattatatgtgtcggtgtcgtgtc 3966566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17593770 - 17593718
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||||||||||| || |||||||||||||| |||| |||||||| ||||||    
T  17593770 taatttgagaaaatcacgtaattcagtgtaattatatatgttggtggtgtgtc 17593718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 31264449 - 31264489
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  31264449 taatttgagaaaatgacataattcagtgtaatcataagtgt 31264489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Complemental strand, 6326345 - 6326314
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaat 32  Q
    ||||||||||||||||||||||||||||||||    
T  6326345 taatttgagaaaattacataattcagtgtaat 6326314  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 14873528 - 14873607
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||  |||||||| |||||||| |||||||| |||||  ||||||||   |||| ||||| |||||||||    
T  14873528 taatttgagaaaagcacataatttagtgtaattatatgtgtcggtgtcatgtcggacgcaacacgtgtccaacaccggga 14873607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 18421889 - 18421815
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||| ||||||| ||||||||| |||||||| |     | |||||||| |||||||||||| ||||||||    
T  18421889 taatttgagaaaatcacataatccagtgtaattatatgtgtcg-----gcgtcggacacgacacatgtccggcaccggga 18421815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 24273078 - 24273039
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtg 40  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  24273078 taatttgagaaaatcacataattcagtgtaattatatgtg 24273039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Original strand, 24389136 - 24389175
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtg 40  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  24389136 taatttgagaaaatcacataattcagtgtaattatatgtg 24389175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 27932246 - 27932277
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaat 32  Q
    ||||||||||||||||||||||||||||||||    
T  27932246 taatttgagaaaattacataattcagtgtaat 27932277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Original strand, 2419868 - 2419902
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcat 35  Q
    |||||||||||||||||| ||||||||||||||||    
T  2419868 taatttgagaaaattacacaattcagtgtaatcat 2419902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 2577228 - 2577190
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgt 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  2577228 taatttgagaaaatgacataatttagtgtaatcatatgt 2577190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 12264875 - 12264837
Alignment:
Q  3 atttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    ||||||||||||||||| |||||||||||| ||||||||    
T  12264875 atttgagaaaattacatgattcagtgtaattatatgtgt 12264837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 79
Target Start/End: Complemental strand, 21194171 - 21194098
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggg 79  Q
    |||||||||||||| |||| |||||||||||| ||| || ||||||||     ||||| |||||||||| |||||||||    
T  21194171 taatttgagaaaatcacatcattcagtgtaattataggtattggtgtt-----ggacacgacacatgtcagacaccggg 21194098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 35
Target Start/End: Complemental strand, 21194253 - 21194219
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcat 35  Q
    |||||||||||||| ||||||||||||||||||||    
T  21194253 taatttgagaaaatcacataattcagtgtaatcat 21194219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 28588722 - 28588676
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| ||||||||||||||||| ||| |||| |||||    
T  28588722 taatttgagaaaatcacataattcagtgtaattataggtgtcggtgt 28588676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 41
Target Start/End: Complemental strand, 41091303 - 41091265
Alignment:
Q  3 atttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||| ||||||||||||||||| ||||||||    
T  41091303 atttgagaaaatcacataattcagtgtaattatatgtgt 41091265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19293471 - 19293430
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgtt 42  Q
    |||||| ||||||| |||||||| ||||||||||||||||||    
T  19293471 taatttaagaaaataacataattaagtgtaatcatatgtgtt 19293430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Complemental strand, 26205805 - 26205768
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    ||||||||||| ||||||||||||||||||||| ||||    
T  26205805 tttgagaaaatgacataattcagtgtaatcataggtgt 26205768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 38806896 - 38806839
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    ||||||||||| || |||| ||||| ||||| ||||||||| |||| |||||||||||    
T  38806896 taatttgagaatatgacatgattcaatgtaagcatatgtgtcggtgctgtgtcggaca 38806839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 5 - 54
Target Start/End: Original strand, 40211971 - 40212020
Alignment:
Q  5 ttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    ||||||||||||||||||||| | ||||||||||| | ||||| ||||||    
T  40211971 ttgagaaaattacataattcaatataatcatatgtatcggtgtcgtgtcg 40212020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 18607145 - 18607105
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||| |||||||||| ||||    
T  18607145 taatttgagaaaataacataattcaatgtaatcataggtgt 18607105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 19168869 - 19168829
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||| ||||| |||| |||||||||||||||||||||    
T  19168869 taatttgataaaatcacattattcagtgtaatcatatgtgt 19168829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 23220994 - 23221042
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    |||||||| ||||| |||||||| ||||| ||||||||||| |||||||    
T  23220994 taatttgataaaatcacataatttagtgttatcatatgtgtcggtgttg 23221042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 32630783 - 32630743
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||||| |||||||| |||||| ||||||||    
T  32630783 taatttgagaaaattatataattcaatgtaattatatgtgt 32630743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 58
Target Start/End: Complemental strand, 41558701 - 41558645
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    ||||||||||||| |||||||||| |||||| | ||||||  |||| ||||||||||    
T  41558701 aatttgagaaaatgacataattcaatgtaattaaatgtgtcagtgtcgtgtcggaca 41558645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 42; Significance: 0.000000000000006; HSPs: 33)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 18513289 - 18513232
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| |||||||||| |||||||||||||||  |||||||||||||||    
T  18513289 taatttgagaaaatgacataattcaatgtaatcatatgtgtcagtgttgtgtcggaca 18513232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 46180984 - 46180941
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttgg 44  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  46180984 taatttgagaaaataacataattcagtgtaatcatatgtgttgg 46180941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 57
Target Start/End: Complemental strand, 15659808 - 15659752
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggac 57  Q
    ||||||||||||||  |||||||| ||||||| |||||||||||||| |||||||||    
T  15659808 taatttgagaaaatctcataattcggtgtaattatatgtgttggtgtcgtgtcggac 15659752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 36635335 - 36635415
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt-tgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||| ||||||||||||||||| ||||||||| ||||  ||||| |||| |||||  ||| ||||||||||    
T  36635335 taatttgagaaaatcacataattcagtgtaattatatgtgttcgtgtgagtgtcagacacgacacgcgtcagacaccggga 36635415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 7012077 - 7012131
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||||| |||||||||||||| |||||| || | |||||||||||||    
T  7012077 taatttgagaaaatgacataattcagtgtgatcataggtatcggtgttgtgtcgg 7012131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 18576085 - 18576039
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| ||||||||| ||||||| ||||||||||||||    
T  18576085 taatttgagaaaatcacataattcggtgtaattatatgtgttggtgt 18576039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 43
Target Start/End: Complemental strand, 20743326 - 20743284
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttg 43  Q
    |||||||||||||| ||||||||||||||||||||| ||||||    
T  20743326 taatttgagaaaatgacataattcagtgtaatcataggtgttg 20743284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 40783968 - 40784014
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||| ||| ||||||||||| ||||||||||||||||||||    
T  40783968 taatttgagataataacataattcagcgtaatcatatgtgttggtgt 40784014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 77
Target Start/End: Original strand, 21945514 - 21945585
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccg 77  Q
    |||||||| ||||| ||||||||||||||||| | | |||| |||||     |||||||||||||||||||||||||    
T  21945514 taatttgaaaaaatgacataattcagtgtaattacaagtgtcggtgt-----cggacatgacacatgtccgacaccg 21945585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24343518 - 24343558
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||||||||||||||||||||| ||| ||||    
T  24343518 taatttgagaaaattacataattcagtgtaattataggtgt 24343558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 31243596 - 31243556
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  31243596 taatttgagaaaatgacataattcagtgtaatcataggtgt 31243556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Complemental strand, 43300019 - 43299983
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatat 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  43300019 taatttgagaaaattacataattcaatgtaatcatat 43299983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 43300627 - 43300663
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatat 37  Q
    ||||||||||||||||||||||||| |||||||||||    
T  43300627 taatttgagaaaattacataattcaatgtaatcatat 43300663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 3947814 - 3947739
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacacc 76  Q
    |||||||| |||||  |||||||||||||||| | | ||||  |||| |||||||||| ||||| |||||||||||    
T  3947814 taatttgaaaaaatcgcataattcagtgtaattacaagtgtcagtgtcgtgtcggacacgacacgtgtccgacacc 3947739  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 40
Target Start/End: Complemental strand, 22440648 - 22440609
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtg 40  Q
    |||||||||||||| ||||||||||||||||| |||||||    
T  22440648 taatttgagaaaatcacataattcagtgtaattatatgtg 22440609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 29205455 - 29205529
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||| ||||| ||||||||||||||||| | | |||| ||||||     ||||| |||||||||||||||||||||    
T  29205455 taatttgaaaaaatcacataattcagtgtaattacaagtgtcggtgtt-----ggacacgacacatgtccgacaccggga 29205529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 4 - 80
Target Start/End: Original strand, 37496718 - 37496800
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt------cggacatgacacatgtccgacaccggga 80  Q
    ||||||||||| |||||||||| |||||||| | |||| ||||||||||      |||||| |||||||||| ||||||||||    
T  37496718 tttgagaaaatgacataattcaatgtaatcacaagtgtcggtgttgtgtcgttgccggacacgacacatgtcggacaccggga 37496800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 903933 - 903971
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgt 39  Q
    |||||||||||||| ||||||||||||||||| ||||||    
T  903933 taatttgagaaaatcacataattcagtgtaattatatgt 903971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 5775406 - 5775360
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||| |||||||| |||||||| |||||    
T  5775406 taatttgagaaaatcacataattaagtgtaattatatgtgtcggtgt 5775360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 15029776 - 15029822
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||| || || ||||||||||||||||| ||||||||||||||    
T  15029776 taatttgaaaatatcacataattcagtgtaattatatgtgttggtgt 15029822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 30103404 - 30103359
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||| ||||||||||||||||| |||||    
T  30103404 taatttgagaaaatcacataatt-agtgtaatcatatgtgtcggtgt 30103359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 33950147 - 33950193
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||| | ||||||||||||||| |||||    
T  33950147 taatttgagaaaatcacataatttaatgtaatcatatgtgtcggtgt 33950193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 10 - 47
Target Start/End: Complemental strand, 15835677 - 15835640
Alignment:
Q  10 aaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    ||||||| ||||||| ||||||||||||||||||||||    
T  15835677 aaaattatataattccgtgtaatcatatgtgttggtgt 15835640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 41
Target Start/End: Original strand, 40613464 - 40613501
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    ||||||||||| ||||||||||||||||| ||||||||    
T  40613464 tttgagaaaatcacataattcagtgtaattatatgtgt 40613501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 46160912 - 46160961
Alignment:
Q  6 tgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    ||||||||| |||||||||||||| || |||||||| ||||| |||||||    
T  46160912 tgagaaaataacataattcagtgttattatatgtgtcggtgtcgtgtcgg 46160961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5654639 - 5654599
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||| |||||||||| ||||    
T  5654639 taatttgagaaaatgacataattcaatgtaatcatacgtgt 5654599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 58
Target Start/End: Original strand, 7970535 - 7970587
Alignment:
Q  6 tgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    ||||||||| | ||||||||||||||| |||||| ||||||| ||||| ||||    
T  7970535 tgagaaaatcatataattcagtgtaattatatgttttggtgtcgtgtcagaca 7970587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 11110214 - 11110254
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||  |||||||||||||||    
T  11110214 taatttgagaaaatgacataattcgatgtaatcatatgtgt 11110254  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 14465342 - 14465302
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||| | |||||||||||||    
T  14465342 taatttgagaaaatgacataattcaatttaatcatatgtgt 14465302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 16189721 - 16189765
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtg 46  Q
    ||||||||||||| ||||||||||||||||| || ||||| ||||    
T  16189721 aatttgagaaaatcacataattcagtgtaattatgtgtgtcggtg 16189765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 55
Target Start/End: Complemental strand, 30982924 - 30982872
Alignment:
Q  3 atttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||| ||||| ||||||||||| ||| |||| ||||| |||||||    
T  30982924 atttgagaaaatcacatatttcagtgtaattataagtgtcggtgtcgtgtcgg 30982872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 37698723 - 37698759
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatat 37  Q
    |||||||||||||||| ||||||||||||||| ||||    
T  37698723 taatttgagaaaattatataattcagtgtaattatat 37698759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 55941051 - 55941011
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||| |||||||||||||||| ||| |||||||||||||    
T  55941051 taatttaagaaaattacataatttagtataatcatatgtgt 55941011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 40; Significance: 0.00000000000009; HSPs: 27)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 11803270 - 11803321
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||| ||||||| ||||||||||||||||| |||||||||||||||||||    
T  11803270 taatttaagaaaatcacataattcagtgtaattatatgtgttggtgttgtgt 11803321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 3508063 - 3508108
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtg 46  Q
    |||||||||||||| |||||||||| ||||||||||||||||||||    
T  3508063 taatttgagaaaataacataattcaatgtaatcatatgtgttggtg 3508108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 7658474 - 7658522
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    |||||||||||||||||||||||||||||||| |||| ||| |||||||    
T  7658474 taatttgagaaaattacataattcagtgtaattatatttgtcggtgttg 7658522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 12559154 - 12559074
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca-tgacacatgtccgacaccggga 80  Q
    |||||||||||||| | |||||||||||||||||||||| |||||||  | |||||||  ||||| ||||||||| |||||    
T  12559154 taatttgagaaaatgatataattcagtgtaatcatatgtattggtgtcatctcggacaccgacacgtgtccgacaacggga 12559074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4611545 - 4611599
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||||| ||||||||||||||||| |||||| | |||| ||||||||    
T  4611545 taatttgagaaaataacataattcagtgtaattatatgtctcggtgctgtgtcgg 4611599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 37
Target Start/End: Original strand, 13203652 - 13203688
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatat 37  Q
    |||||||||||||||||||||||||||||||| ||||    
T  13203652 taatttgagaaaattacataattcagtgtaattatat 13203688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 54
Target Start/End: Complemental strand, 14634188 - 14634136
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    ||||| ||||||||| ||||||||||||||| |||| ||||||||| ||||||    
T  14634188 aatttaagaaaattatataattcagtgtaattatatttgttggtgtcgtgtcg 14634136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 34897096 - 34897136
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  34897096 taatttgagaaaatcacataattcagtgtaattatatgtgt 34897136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 11927134 - 11927083
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||| ||||| ||||||||||||||||| |||||||| ||||| ||||    
T  11927134 taatttgataaaatcacataattcagtgtaattatatgtgtcggtgtcgtgt 11927083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 36
Target Start/End: Complemental strand, 14513222 - 14513187
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcata 36  Q
    |||||||||||||||||||||||||| |||||||||    
T  14513222 taatttgagaaaattacataattcagcgtaatcata 14513187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 4786386 - 4786340
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||| ||||||| ||||||||||||||||| |||||||| |||||    
T  4786386 taatttaagaaaatcacataattcagtgtaattatatgtgtcggtgt 4786340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 12985403 - 12985449
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||||| ||||||||||| ||| |||||    
T  12985403 taatttgagaaaatcacataattcaatgtaatcatatatgtcggtgt 12985449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 13844644 - 13844598
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| |||||||| |||||||| |||||||| |||||    
T  13844644 taatttgagaaaatcacataattgagtgtaattatatgtgtcggtgt 13844598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 14134710 - 14134756
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| ||||||||||||||||| |||| ||| |||||    
T  14134710 taatttgagaaaatcacataattcagtgtaattatatatgtcggtgt 14134756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 18646183 - 18646229
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||| ||||| |||| ||||||||||||||||| |||||||||    
T  18646183 taatttgaaaaaatgacatgattcagtgtaatcatatatgttggtgt 18646229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 22493505 - 22493555
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtg 51  Q
    |||||| | ||||| |||||||||||||||||||||| ||| |||||||||    
T  22493505 taattttaaaaaatcacataattcagtgtaatcatatatgtcggtgttgtg 22493555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 37225791 - 37225753
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgt 39  Q
    |||||||||||||| |||||||||| |||||||||||||    
T  37225791 taatttgagaaaataacataattcaatgtaatcatatgt 37225753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 50
Target Start/End: Original strand, 7442856 - 7442905
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgt 50  Q
    |||||| | ||||||||||||||||||||||| | | |||||||||||||    
T  7442856 taatttcataaaattacataattcagtgtaattacaagtgttggtgttgt 7442905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 38
Target Start/End: Complemental strand, 29198527 - 29198490
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatg 38  Q
    |||||||||||||| |||||||||| ||||||||||||    
T  29198527 taatttgagaaaatgacataattcaatgtaatcatatg 29198490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 31236625 - 31236580
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtg 46  Q
    |||||||||||||| |||||||||| |||||| |||||||| ||||    
T  31236625 taatttgagaaaatcacataattcaatgtaattatatgtgtcggtg 31236580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 33389409 - 33389356
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcg 54  Q
    |||| ||||||||  |||||||| ||| ||||||||||||||||||| ||||||    
T  33389409 taatatgagaaaagaacataattaagtataatcatatgtgttggtgtcgtgtcg 33389356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 3025562 - 3025602
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||| ||| ||||    
T  3025562 taatttgagaaaatcacataattcagtgtaattataggtgt 3025602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4122297 - 4122245
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    ||||| || ||||||| |||||||| |||||| |||||||| |||||||||||    
T  4122297 taattagataaaattatataattcattgtaattatatgtgtcggtgttgtgtc 4122245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 14731723 - 14731763
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||| |||||||| ||||||||    
T  14731723 taatttgagaaaatcacataatttagtgtaattatatgtgt 14731763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 24362250 - 24362210
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||| ||| ||||||||||||||||| ||||||||    
T  24362250 taatttgagagaatcacataattcagtgtaattatatgtgt 24362210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 26418390 - 26418350
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| | || |||||||||||||||||||||    
T  26418390 taatttgagaaaatcatattattcagtgtaatcatatgtgt 26418350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 28883926 - 28883886
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||| ||||||| ||||    
T  28883926 taatttgagaaaatgacataattcagtggaatcataggtgt 28883886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0044 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0044
Description:

Target: scaffold0044; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 53191 - 53276
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtg------ttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||||||||||||| ||||||||||||||||| ||| |||| ||||        |||||||||||||||| |||||||||||||||    
T  53191 taatttgagaaaatcacataattcagtgtaattataagtgtcggtgccgtgtcggtgtcggacatgacacgtgtccgacaccggga 53276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0024 (Bit Score: 35; Significance: 0.00000000009; HSPs: 1)
Name: scaffold0024
Description:

Target: scaffold0024; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 4 - 58
Target Start/End: Complemental strand, 18153 - 18099
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    ||||||||||| |||||||||| |||||||  | |||||||||||||||||||||    
T  18153 tttgagaaaataacataattcaatgtaatcgcaagtgttggtgttgtgtcggaca 18099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 35; Significance: 0.00000000009; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 5 - 47
Target Start/End: Complemental strand, 18889635 - 18889593
Alignment:
Q  5 ttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||| |||||||||||||||||||||||||| |||||    
T  18889635 ttgagaaaatcacataattcagtgtaatcatatgtgtcggtgt 18889593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 30527643 - 30527570
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgaca 74  Q
    |||||||||||||| | |||||| |||||||| |||||||| ||| | |||||| |||||| |||||| |||||    
T  30527643 taatttgagaaaatcatataatttagtgtaattatatgtgtcggtatcgtgtcgcacatgagacatgttcgaca 30527570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 11 - 80
Target Start/End: Original strand, 41843462 - 41843531
Alignment:
Q  11 aaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    |||| ||||||||| || |||| |||||||| |||||||||||||||  ||||| |||||||||| ||||    
T  41843462 aaatcacataattcggtataattatatgtgtcggtgttgtgtcggacgcgacacgtgtccgacacgggga 41843531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 10535807 - 10535767
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||||||| ||||    
T  10535807 taatttgagaaaatgacataattcagtgtaatcataagtgt 10535767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 4 - 40
Target Start/End: Complemental strand, 15909677 - 15909641
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtg 40  Q
    ||||||||||||||||||||||||||||| |||||||    
T  15909677 tttgagaaaattacataattcagtgtaattatatgtg 15909641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 18570983 - 18571023
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||| |||||||||||||||    
T  18570983 taatttgagaaaatgacataattcaatgtaatcatatgtgt 18571023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 21616773 - 21616813
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||||||||||||||||| ||||||||    
T  21616773 taatttgagaaaatcacataattcagtgtaattatatgtgt 21616813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 80
Target Start/End: Original strand, 5367203 - 5367277
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacatgtccgacaccggga 80  Q
    ||||||||| |||| ||||||||||||||||| |||||||| |     |||||||||| ||||||| |||||| ||||||    
T  5367203 taatttgaggaaatcacataattcagtgtaattatatgtgtcg-----gtgtcggacacgacacatatccgactccggga 5367277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 23921264 - 23921295
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaat 32  Q
    ||||||||||||||||||||||||||||||||    
T  23921264 taatttgagaaaattacataattcagtgtaat 23921295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 44860331 - 44860382
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    ||||||||||||||  |||||||||||||||| |||||||| ||||| ||||    
T  44860331 taatttgagaaaatcgcataattcagtgtaattatatgtgtcggtgtcgtgt 44860382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Original strand, 2415328 - 2415374
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||||| |||||| |||||||  ||||||||||||||    
T  2415328 taatttgagaaaattatataattaagtgtaactatatgtgttggtgt 2415374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 12668471 - 12668417
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||| ||||| ||||||||||||||||| ||| |||| ||||| |||||||    
T  12668471 taatttgaaaaaatgacataattcagtgtaattataagtgtcggtgtcgtgtcgg 12668417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 43
Target Start/End: Original strand, 12748695 - 12748737
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttg 43  Q
    |||||||||||||| ||||| ||||||||||||||| ||||||    
T  12748695 taatttgagaaaatgacatagttcagtgtaatcataggtgttg 12748737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Complemental strand, 17520118 - 17520080
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgt 39  Q
    |||||| ||||||| ||||||||||||||||||||||||    
T  17520118 taatttaagaaaatcacataattcagtgtaatcatatgt 17520080  T

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Target: chr2; HSP #15
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 34007039 - 34006993
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||| | ||||||||||||||||||||| |||| |||||    
T  34007039 taatttgagaaattgacataattcagtgtaatcataggtgtcggtgt 34006993  T

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Target: chr2; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 39
Target Start/End: Original strand, 36281696 - 36281734
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgt 39  Q
    |||||||||||||| |||||||| |||||||||||||||    
T  36281696 taatttgagaaaatcacataatttagtgtaatcatatgt 36281734  T

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Target: chr2; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 40361802 - 40361756
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||| |||||||||||||| |||||||| |||| |||||||||    
T  40361802 taatttgaaaaaattacataatttagtgtaattatatctgttggtgt 40361756  T

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Target: chr2; HSP #18
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 42832324 - 42832278
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||||||||| ||||||||||| ||| |||| |||||    
T  42832324 taatttgagaaaattacatatttcagtgtaattataagtgtcggtgt 42832278  T

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Target: chr2; HSP #19
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 4 - 49
Target Start/End: Complemental strand, 8300264 - 8300219
Alignment:
Q  4 tttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    ||||||||||| |||||||| |||||||||||| |||| |||||||    
T  8300264 tttgagaaaatgacataatttagtgtaatcataagtgtcggtgttg 8300219  T

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Target: chr2; HSP #20
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 42
Target Start/End: Complemental strand, 19613661 - 19613620
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgtt 42  Q
    |||||||||||||| |||||||||| |||||| |||||||||    
T  19613661 taatttgagaaaataacataattcaatgtaatgatatgtgtt 19613620  T

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Target: chr2; HSP #21
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23718037 - 23718082
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtg 46  Q
    |||||||||||| | ||||||||||||||||| |||||||| ||||    
T  23718037 taatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 23718082  T

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Target: chr2; HSP #22
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 24105709 - 24105754
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtg 46  Q
    |||||||||||| | ||||||||||||||||| |||||||| ||||    
T  24105709 taatttgagaaagtcacataattcagtgtaattatatgtgtcggtg 24105754  T

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Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 9 - 58
Target Start/End: Original strand, 44776618 - 44776667
Alignment:
Q  9 gaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||| |||||| ||||||||||||||| ||| ||||| ||||||||||    
T  44776618 gaaaatgacataactcagtgtaatcatatatgtcggtgtcgtgtcggaca 44776667  T

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Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000009
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 45000893 - 45000848
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    ||||||||||||| ||| |||||| ||||||||||||||| |||||    
T  45000893 aatttgagaaaatgacacaattcaatgtaatcatatgtgtcggtgt 45000848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 4229456 - 4229416
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||| ||| ||| ||||||||||||||||||||||||||    
T  4229456 taatttaagagaatgacataattcagtgtaatcatatgtgt 4229416  T

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Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 11308052 - 11308012
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||| ||||| ||||||||||||||||||||| ||||    
T  11308052 taatttgaaaaaatgacataattcagtgtaatcataggtgt 11308012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18420482 - 18420430
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||||||||||| |||||||||| || ||| ||| |||| |||||||||||    
T  18420482 taatttgagaaaatcacataattcaatgcaattataagtgtcggtgttgtgtc 18420430  T

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Target: chr2; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 18622617 - 18622669
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||| | ||||| ||||||||||||||||| ||| |||||||||| |||||    
T  18622617 taatttaataaaatcacataattcagtgtaattatacgtgttggtgtcgtgtc 18622669  T

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Target: chr2; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 24011047 - 24011087
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||| |||||||||||| ||||    
T  24011047 taatttgagaaaatgacataatttagtgtaatcataggtgt 24011087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 25544492 - 25544532
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| | ||||||||||||||||||| ||||    
T  25544492 taatttgagaaaatgatataattcagtgtaatcataggtgt 25544532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 29970597 - 29970557
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    ||||||||||||||  |||| ||||||||||||||||||||    
T  29970597 taatttgagaaaatcgcatagttcagtgtaatcatatgtgt 29970557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 35449524 - 35449564
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| ||| ||||||||||||| ||||||||    
T  35449524 taatttgagaaaatcacagaattcagtgtaattatatgtgt 35449564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 37411292 - 37411252
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgt 41  Q
    |||||||||||||| |||||||||||||| || ||||||||    
T  37411292 taatttgagaaaatcacataattcagtgtgattatatgtgt 37411252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 47
Target Start/End: Complemental strand, 38355933 - 38355889
Alignment:
Q  3 atttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||| |||||||||||||| || |||||||| |||||    
T  38355933 atttgagaaaatcacataattcagtgtgattatatgtgtcggtgt 38355889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 39279686 - 39279734
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttg 49  Q
    |||| ||||||||| | ||||||||||||||| |||||||| |||||||    
T  39279686 taatatgagaaaatcaaataattcagtgtaattatatgtgtcggtgttg 39279734  T

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Target: scaffold0123 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 44572 - 44519
Alignment:
Q  2 aatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    ||||||||||||| ||||||||||||||||| |||||||| ||| | |||||||    
T  44572 aatttgagaaaatcacataattcagtgtaattatatgtgtcggtatcgtgtcgg 44519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 34; Significance: 0.0000000004; HSPs: 2)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 58
Target Start/End: Complemental strand, 135360 - 135303
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggaca 58  Q
    |||||||||||||| ||||||||| ||||||| |||||||| ||||| ||||| ||||    
T  135360 taatttgagaaaatcacataattctgtgtaattatatgtgtcggtgtcgtgtccgaca 135303  T

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Target: scaffold0020; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 137791 - 137843
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||| ||||||| ||| ||||||||||| |||||||||||||||| |||||    
T  137791 taatttaagaaaatcacacaattcagtgtagtcatatgtgttggtgtcgtgtc 137843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0171 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0171
Description:

Target: scaffold0171; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 10 - 66
Target Start/End: Original strand, 23440 - 23496
Alignment:
Q  10 aaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacatgacacat 66  Q
    ||||| ||||||||||||||||| ||| |||| ||||| |||||||||| |||||||    
T  23440 aaaatcacataattcagtgtaattataagtgtcggtgtcgtgtcggacacgacacat 23496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 99904 - 99956
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtc 53  Q
    |||||| ||||||| |||||||||| |||||| |||||||||||||| |||||    
T  99904 taattttagaaaataacataattcaatgtaattatatgtgttggtgtcgtgtc 99956  T

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Target: scaffold0036 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0036
Description:

Target: scaffold0036; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 52
Target Start/End: Complemental strand, 9795 - 9744
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgt 52  Q
    |||||||||||||| || |||||||||||||| |||||||| ||||| ||||    
T  9795 taatttgagaaaatcacttaattcagtgtaattatatgtgtcggtgtcgtgt 9744  T

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Target: scaffold0004 (Bit Score: 32; Significance: 0.000000006; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 32; E-Value: 0.000000006
Query Start/End: Original strand, 1 - 32
Target Start/End: Original strand, 92818 - 92849
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaat 32  Q
    ||||||||||||||||||||||||||||||||    
T  92818 taatttgagaaaattacataattcagtgtaat 92849  T

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Target: scaffold1528 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold1528
Description:

Target: scaffold1528; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 1046 - 1100
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||| ||||||||||||||||||||||  ||||||||  |||| |||||||    
T  1046 taatttgaaaaaattacataattcagtgtaactatatgtgtcagtgtggtgtcgg 1100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0110 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 59
Target Start/End: Original strand, 28861 - 28919
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcggacat 59  Q
    |||||| |||||||  ||||||||| |||||| |||||||| ||||||||||| |||||    
T  28861 taatttaagaaaatcgcataattcaatgtaattatatgtgtcggtgttgtgtcagacat 28919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 56933 - 56987
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgttgtgtcgg 55  Q
    |||||||||||||| | ||||||||||||||||||| ||||  |||| |||||||    
T  56933 taatttgagaaaatgatataattcagtgtaatcataagtgtcagtgtcgtgtcgg 56987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0011 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 240069 - 240023
Alignment:
Q  1 taatttgagaaaattacataattcagtgtaatcatatgtgttggtgt 47  Q
    |||||||||||||| | |||||||| ||||||||||||||| |||||    
T  240069 taatttgagaaaataatataattcaatgtaatcatatgtgtcggtgt 240023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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