View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4049_low_33 (Length: 248)

Name: NF4049_low_33
Description: NF4049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4049_low_33
NF4049_low_33
[»] chr7 (70 HSPs)
chr7 (6-88)||(44804522-44804604)
chr7 (6-88)||(29467753-29467835)
chr7 (9-91)||(34872174-34872256)
chr7 (20-91)||(35156995-35157066)
chr7 (9-91)||(29684113-29684195)
chr7 (6-91)||(7857009-7857093)
chr7 (20-91)||(11840447-11840518)
chr7 (20-91)||(21600970-21601041)
chr7 (6-88)||(3791481-3791563)
chr7 (192-236)||(20761672-20761716)
chr7 (192-236)||(29487219-29487263)
chr7 (192-236)||(33233911-33233955)
chr7 (192-236)||(34286008-34286052)
chr7 (26-88)||(24684636-24684698)
chr7 (192-233)||(7856825-7856866)
chr7 (192-233)||(29486442-29486483)
chr7 (192-237)||(33234688-33234733)
chr7 (6-91)||(39651148-39651233)
chr7 (192-236)||(19037612-19037656)
chr7 (192-236)||(20716980-20717024)
chr7 (6-74)||(39276615-39276683)
chr7 (193-233)||(44804751-44804791)
chr7 (4-91)||(17169024-17169111)
chr7 (194-233)||(42993746-42993785)
chr7 (192-238)||(4848566-4848612)
chr7 (194-232)||(38437845-38437883)
chr7 (192-233)||(3791707-3791748)
chr7 (6-74)||(9143475-9143546)
chr7 (192-233)||(9143662-9143703)
chr7 (192-233)||(9144220-9144261)
chr7 (192-233)||(9144777-9144818)
chr7 (192-233)||(17169255-17169296)
chr7 (192-233)||(19038386-19038427)
chr7 (192-233)||(20716209-20716250)
chr7 (192-233)||(20760896-20760937)
chr7 (192-233)||(34286788-34286829)
chr7 (192-233)||(34872396-34872437)
chr7 (26-74)||(688085-688133)
chr7 (192-232)||(31899806-31899846)
chr7 (192-236)||(34127409-34127453)
chr7 (192-226)||(688261-688295)
chr7 (194-236)||(42914077-42914119)
chr7 (192-225)||(689531-689564)
chr7 (192-237)||(4495290-4495335)
chr7 (192-233)||(7856401-7856442)
chr7 (192-233)||(11840272-11840313)
chr7 (192-233)||(19516817-19516858)
chr7 (6-59)||(21670824-21670877)
chr7 (192-233)||(23302206-23302247)
chr7 (192-233)||(29683933-29683974)
chr7 (195-232)||(33028703-33028740)
chr7 (192-233)||(35156809-35156850)
chr7 (192-233)||(39650964-39651005)
chr7 (192-233)||(44805148-44805189)
chr7 (192-233)||(48529776-48529817)
chr7 (6-91)||(48529933-48530018)
chr7 (193-233)||(688813-688853)
chr7 (192-236)||(14306047-14306091)
chr7 (192-236)||(17469345-17469389)
chr7 (192-236)||(17583825-17583869)
chr7 (192-236)||(19517236-19517280)
chr7 (192-232)||(21893487-21893527)
chr7 (192-236)||(23771355-23771399)
chr7 (192-236)||(38541441-38541485)
chr7 (192-236)||(38542109-38542153)
chr7 (193-233)||(42685019-42685059)
chr7 (192-236)||(42830284-42830328)
chr7 (192-232)||(42912636-42912676)
chr7 (192-236)||(47167805-47167849)
chr7 (192-236)||(47169603-47169647)
[»] chr4 (96 HSPs)
chr4 (9-91)||(24547336-24547418)
chr4 (6-90)||(51347490-51347574)
chr4 (4-91)||(13171625-13171712)
chr4 (6-91)||(36743201-36743286)
chr4 (6-91)||(50119957-50120042)
chr4 (6-91)||(3757728-3757813)
chr4 (6-91)||(20588564-20588649)
chr4 (20-88)||(29712386-29712454)
chr4 (20-91)||(30529278-30529349)
chr4 (1-88)||(39406234-39406321)
chr4 (26-88)||(8956938-8957000)
chr4 (26-88)||(8986910-8986972)
chr4 (6-88)||(24948289-24948371)
chr4 (26-88)||(37349808-37349870)
chr4 (6-88)||(43021894-43021976)
chr4 (6-88)||(53991554-53991636)
chr4 (6-91)||(3821198-3821283)
chr4 (10-91)||(16895991-16896072)
chr4 (6-91)||(39716717-39716802)
chr4 (192-236)||(10263269-10263313)
chr4 (192-236)||(21561142-21561186)
chr4 (192-236)||(24081369-24081413)
chr4 (192-236)||(26928222-26928266)
chr4 (192-236)||(43328649-43328693)
chr4 (193-237)||(51347684-51347728)
chr4 (20-91)||(17730449-17730520)
chr4 (6-84)||(35716305-35716383)
chr4 (192-238)||(47559499-47559545)
chr4 (192-233)||(13171842-13171883)
chr4 (192-233)||(15704337-15704378)
chr4 (192-233)||(19587108-19587149)
chr4 (192-233)||(30529121-30529162)
chr4 (26-74)||(5752473-5752521)
chr4 (193-233)||(50119813-50119853)
chr4 (192-236)||(51448699-51448743)
chr4 (192-236)||(56002804-56002848)
chr4 (26-85)||(9888895-9888954)
chr4 (194-233)||(26873651-26873690)
chr4 (192-233)||(2116306-2116347)
chr4 (192-233)||(3821019-3821060)
chr4 (192-233)||(5752643-5752684)
chr4 (192-233)||(12682572-12682613)
chr4 (192-233)||(17730659-17730700)
chr4 (192-233)||(20588789-20588830)
chr4 (192-233)||(21560365-21560406)
chr4 (192-233)||(24082151-24082192)
chr4 (192-233)||(24547563-24547604)
chr4 (192-233)||(26928980-26929021)
chr4 (192-233)||(35498220-35498261)
chr4 (6-91)||(35498532-35498617)
chr4 (192-233)||(35716116-35716157)
chr4 (192-233)||(36743018-36743059)
chr4 (192-233)||(39716535-39716576)
chr4 (192-233)||(43327872-43327913)
chr4 (192-233)||(47560045-47560086)
chr4 (192-233)||(51447949-51447990)
chr4 (192-233)||(52799254-52799295)
chr4 (192-233)||(53339100-53339141)
chr4 (193-233)||(578421-578461)
chr4 (20-88)||(578607-578675)
chr4 (193-233)||(5753193-5753233)
chr4 (192-236)||(13626058-13626102)
chr4 (192-236)||(14832605-14832649)
chr4 (192-236)||(15657177-15657221)
chr4 (192-236)||(15657896-15657940)
chr4 (192-232)||(16896216-16896256)
chr4 (192-232)||(20589212-20589252)
chr4 (192-236)||(36854144-36854188)
chr4 (192-236)||(56002121-56002165)
chr4 (192-232)||(56003245-56003285)
chr4 (194-237)||(7647722-7647765)
chr4 (193-236)||(14831894-14831937)
chr4 (193-236)||(23476757-23476800)
chr4 (192-222)||(743764-743794)
chr4 (192-226)||(10264056-10264090)
chr4 (192-222)||(15517625-15517655)
chr4 (26-88)||(50033703-50033764)
chr4 (192-233)||(3757953-3757994)
chr4 (192-233)||(13172267-13172308)
chr4 (192-233)||(13625673-13625714)
chr4 (192-233)||(20589637-20589678)
chr4 (195-236)||(21352004-21352045)
chr4 (192-237)||(23476323-23476368)
chr4 (192-233)||(24547988-24548029)
chr4 (192-233)||(46104399-46104440)
chr4 (192-233)||(50119388-50119429)
chr4 (192-232)||(2775511-2775551)
chr4 (192-236)||(7646640-7646684)
chr4 (192-236)||(17697565-17697609)
chr4 (192-236)||(21352712-21352756)
chr4 (192-236)||(33505303-33505347)
chr4 (192-236)||(34059648-34059692)
chr4 (192-224)||(36742601-36742633)
chr4 (192-236)||(36853427-36853471)
chr4 (192-236)||(41986951-41986995)
chr4 (6-50)||(47560259-47560303)
[»] chr6 (44 HSPs)
chr6 (6-91)||(9737752-9737837)
chr6 (4-88)||(4897497-4897581)
chr6 (192-236)||(246176-246220)
chr6 (192-236)||(12583729-12583773)
chr6 (192-233)||(9737567-9737608)
chr6 (192-233)||(9981077-9981118)
chr6 (1-74)||(15045563-15045636)
chr6 (192-233)||(28193123-28193164)
chr6 (192-233)||(33975206-33975247)
chr6 (26-74)||(6969312-6969360)
chr6 (194-233)||(33328094-33328133)
chr6 (192-233)||(245399-245440)
chr6 (6-91)||(1218520-1218605)
chr6 (192-233)||(4422526-4422567)
chr6 (192-233)||(6969130-6969171)
chr6 (192-233)||(12584483-12584524)
chr6 (192-237)||(18312941-18312986)
chr6 (6-91)||(24443929-24444014)
chr6 (192-233)||(24444156-24444197)
chr6 (192-233)||(28573648-28573689)
chr6 (192-233)||(35133403-35133444)
chr6 (192-236)||(221119-221163)
chr6 (192-236)||(5759902-5759946)
chr6 (192-236)||(11955350-11955394)
chr6 (192-236)||(34317892-34317936)
chr6 (193-236)||(2519008-2519051)
chr6 (192-238)||(1361667-1361713)
chr6 (192-233)||(1218753-1218794)
chr6 (192-233)||(4108185-4108226)
chr6 (195-236)||(18310677-18310718)
chr6 (192-233)||(25529468-25529509)
chr6 (192-233)||(28192999-28193040)
chr6 (192-233)||(28233110-28233151)
chr6 (192-236)||(1076173-1076217)
chr6 (192-236)||(7220608-7220652)
chr6 (192-232)||(11954628-11954668)
chr6 (192-236)||(14890344-14890388)
chr6 (192-236)||(14891062-14891106)
chr6 (192-236)||(17937647-17937691)
chr6 (6-50)||(18323837-18323881)
chr6 (192-236)||(18601925-18601969)
chr6 (192-236)||(21796646-21796690)
chr6 (192-232)||(34317163-34317203)
chr6 (192-236)||(34853406-34853450)
[»] chr3 (71 HSPs)
chr3 (6-91)||(29530561-29530646)
chr3 (6-91)||(8528103-8528188)
chr3 (9-88)||(35855209-35855288)
chr3 (1-91)||(26102150-26102240)
chr3 (20-91)||(19368941-19369012)
chr3 (3-88)||(11955528-11955613)
chr3 (4-91)||(28981817-28981904)
chr3 (192-237)||(22763571-22763616)
chr3 (192-236)||(915042-915086)
chr3 (1-84)||(22473641-22473724)
chr3 (192-237)||(914262-914307)
chr3 (192-237)||(4139162-4139207)
chr3 (6-91)||(11602164-11602249)
chr3 (192-233)||(19368762-19368803)
chr3 (192-237)||(19894913-19894958)
chr3 (26-91)||(22519211-22519276)
chr3 (26-74)||(18682511-18682559)
chr3 (192-236)||(21732210-21732254)
chr3 (192-236)||(51245555-51245599)
chr3 (4-91)||(40831926-40832013)
chr3 (192-238)||(52857607-52857653)
chr3 (192-233)||(11955339-11955380)
chr3 (192-233)||(18682681-18682722)
chr3 (192-233)||(19895469-19895510)
chr3 (192-237)||(23190336-23190381)
chr3 (192-233)||(26777670-26777711)
chr3 (192-233)||(28981633-28981674)
chr3 (192-233)||(29530382-29530423)
chr3 (192-233)||(30814631-30814672)
chr3 (192-233)||(48522914-48522955)
chr3 (192-233)||(51245124-51245165)
chr3 (192-233)||(53800725-53800766)
chr3 (192-233)||(54508991-54509032)
chr3 (26-74)||(8393585-8393633)
chr3 (192-232)||(9563450-9563490)
chr3 (192-232)||(11331323-11331363)
chr3 (192-236)||(16339586-16339630)
chr3 (193-233)||(18683231-18683271)
chr3 (192-236)||(21702595-21702639)
chr3 (6-62)||(33872207-33872263)
chr3 (192-236)||(48974554-48974598)
chr3 (192-236)||(52855767-52855811)
chr3 (20-91)||(55297343-55297414)
chr3 (192-226)||(8393758-8393792)
chr3 (194-232)||(16342864-16342902)
chr3 (25-91)||(19895645-19895711)
chr3 (192-233)||(2847102-2847143)
chr3 (192-225)||(8395032-8395065)
chr3 (192-237)||(18743145-18743190)
chr3 (192-233)||(22473870-22473911)
chr3 (192-233)||(22519412-22519453)
chr3 (192-233)||(29530070-29530111)
chr3 (192-237)||(35434478-35434523)
chr3 (192-237)||(36171235-36171280)
chr3 (192-233)||(44077455-44077496)
chr3 (192-233)||(50736838-50736879)
chr3 (192-233)||(50775976-50776017)
chr3 (26-74)||(4139364-4139412)
chr3 (192-232)||(5238162-5238202)
chr3 (192-236)||(6107987-6108031)
chr3 (193-233)||(8394316-8394356)
chr3 (192-236)||(23191438-23191482)
chr3 (193-233)||(33872418-33872458)
chr3 (192-236)||(35090203-35090247)
chr3 (192-236)||(44076672-44076716)
chr3 (192-236)||(49110252-49110296)
chr3 (192-236)||(50767576-50767620)
chr3 (192-236)||(52469171-52469215)
chr3 (192-236)||(52856797-52856841)
chr3 (192-236)||(54509421-54509465)
chr3 (192-236)||(54510159-54510203)
[»] chr1 (59 HSPs)
chr1 (2-91)||(46626324-46626413)
chr1 (6-91)||(19322344-19322429)
chr1 (6-88)||(33075659-33075741)
chr1 (6-88)||(1826795-1826877)
chr1 (6-88)||(22198910-22198992)
chr1 (6-88)||(38894757-38894839)
chr1 (6-91)||(19400733-19400818)
chr1 (1-88)||(29844884-29844971)
chr1 (6-88)||(42678376-42678458)
chr1 (4-91)||(51971272-51971358)
chr1 (27-91)||(50557850-50557913)
chr1 (6-91)||(1367293-1367378)
chr1 (192-233)||(38894982-38895023)
chr1 (20-88)||(10766202-10766270)
chr1 (192-232)||(19322160-19322200)
chr1 (26-85)||(28570747-28570806)
chr1 (6-69)||(52306071-52306134)
chr1 (194-232)||(28627194-28627232)
chr1 (6-91)||(4890100-4890185)
chr1 (192-233)||(4890329-4890370)
chr1 (192-233)||(5426442-5426483)
chr1 (192-233)||(10766417-10766458)
chr1 (26-91)||(16300411-16300476)
chr1 (192-233)||(16300617-16300658)
chr1 (192-233)||(17364420-17364461)
chr1 (6-91)||(17364603-17364688)
chr1 (192-237)||(23912098-23912143)
chr1 (192-233)||(29188117-29188158)
chr1 (6-91)||(29188300-29188385)
chr1 (192-233)||(29844698-29844739)
chr1 (6-91)||(33359702-33359787)
chr1 (192-233)||(38847954-38847995)
chr1 (192-233)||(42678603-42678644)
chr1 (192-233)||(46626145-46626186)
chr1 (26-91)||(47134726-47134791)
chr1 (192-237)||(52523916-52523961)
chr1 (192-236)||(16034450-16034494)
chr1 (192-236)||(38847596-38847640)
chr1 (192-236)||(40794853-40794897)
chr1 (194-238)||(40795257-40795301)
chr1 (192-232)||(43116255-43116295)
chr1 (192-236)||(45002398-45002442)
chr1 (192-232)||(48337189-48337229)
chr1 (193-236)||(18812078-18812121)
chr1 (193-236)||(27793400-27793443)
chr1 (193-236)||(31617534-31617577)
chr1 (193-236)||(41832394-41832437)
chr1 (193-236)||(41965275-41965318)
chr1 (192-238)||(16035103-16035149)
chr1 (192-226)||(17668938-17668972)
chr1 (192-233)||(1367512-1367553)
chr1 (192-233)||(38895396-38895437)
chr1 (192-225)||(52306295-52306328)
chr1 (192-236)||(36678557-36678601)
chr1 (192-236)||(40794145-40794189)
chr1 (192-232)||(44404871-44404911)
chr1 (192-236)||(44405978-44406022)
chr1 (192-236)||(48337572-48337616)
chr1 (192-236)||(52524640-52524684)
[»] chr8 (65 HSPs)
chr8 (6-91)||(36776406-36776491)
chr8 (6-91)||(24053916-24054001)
chr8 (20-91)||(25346050-25346121)
chr8 (13-88)||(40587695-40587770)
chr8 (25-91)||(41972977-41973043)
chr8 (10-91)||(9472158-9472238)
chr8 (4-91)||(40616094-40616181)
chr8 (26-88)||(8760723-8760785)
chr8 (26-88)||(25836268-25836330)
chr8 (192-236)||(20666863-20666907)
chr8 (192-236)||(44216978-44217022)
chr8 (27-91)||(44389005-44389069)
chr8 (6-78)||(45434992-45435064)
chr8 (20-91)||(42245732-42245803)
chr8 (26-88)||(1942811-1942873)
chr8 (192-233)||(6480509-6480550)
chr8 (192-233)||(9472379-9472420)
chr8 (192-233)||(24054134-24054175)
chr8 (192-233)||(36776633-36776674)
chr8 (192-236)||(30552202-30552246)
chr8 (6-62)||(41152670-41152726)
chr8 (26-85)||(8162781-8162840)
chr8 (194-233)||(12253108-12253147)
chr8 (194-233)||(12258651-12258690)
chr8 (194-233)||(39441647-39441686)
chr8 (26-88)||(32844171-32844233)
chr8 (192-233)||(4466239-4466280)
chr8 (192-233)||(7389431-7389472)
chr8 (192-233)||(18378620-18378661)
chr8 (6-91)||(18378802-18378887)
chr8 (192-233)||(20667643-20667684)
chr8 (192-233)||(25344747-25344788)
chr8 (192-233)||(30552980-30553021)
chr8 (192-233)||(40587540-40587581)
chr8 (192-233)||(41534075-41534116)
chr8 (192-233)||(44217764-44217805)
chr8 (192-232)||(25616274-25616314)
chr8 (192-236)||(30823340-30823384)
chr8 (192-236)||(33426603-33426647)
chr8 (192-232)||(41152796-41152836)
chr8 (192-232)||(44388824-44388864)
chr8 (193-232)||(6480702-6480741)
chr8 (193-236)||(42813235-42813278)
chr8 (194-233)||(45435216-45435255)
chr8 (195-237)||(23523951-23523993)
chr8 (192-222)||(23969842-23969872)
chr8 (193-235)||(38960282-38960324)
chr8 (192-222)||(42064904-42064934)
chr8 (192-222)||(44937078-44937108)
chr8 (192-225)||(3750517-3750550)
chr8 (192-233)||(9472804-9472845)
chr8 (192-233)||(19243448-19243489)
chr8 (192-233)||(19316632-19316673)
chr8 (192-237)||(30822922-30822967)
chr8 (192-233)||(40587124-40587165)
chr8 (192-225)||(41153516-41153549)
chr8 (192-233)||(42245548-42245589)
chr8 (192-237)||(42782310-42782355)
chr8 (192-236)||(9758400-9758444)
chr8 (192-236)||(14081684-14081728)
chr8 (192-236)||(19244162-19244206)
chr8 (192-236)||(19317346-19317390)
chr8 (192-236)||(27277959-27278003)
chr8 (192-236)||(42813947-42813991)
chr8 (193-233)||(42814382-42814422)
[»] chr5 (63 HSPs)
chr5 (1-91)||(17643385-17643475)
chr5 (6-91)||(36886968-36887053)
chr5 (19-91)||(30754424-30754496)
chr5 (6-91)||(3088031-3088116)
chr5 (26-88)||(6305452-6305514)
chr5 (6-88)||(12592471-12592553)
chr5 (26-88)||(43138549-43138611)
chr5 (6-91)||(25698717-25698802)
chr5 (193-237)||(17643232-17643276)
chr5 (192-236)||(37460651-37460695)
chr5 (192-237)||(3026328-3026373)
chr5 (192-233)||(25698535-25698576)
chr5 (192-237)||(37459873-37459918)
chr5 (193-237)||(26323708-26323752)
chr5 (192-232)||(30754632-30754672)
chr5 (192-232)||(42977651-42977691)
chr5 (26-85)||(754450-754509)
chr5 (27-90)||(12422345-12422408)
chr5 (194-232)||(9698033-9698071)
chr5 (40-90)||(42977833-42977883)
chr5 (192-233)||(12592286-12592327)
chr5 (6-63)||(26602196-26602253)
chr5 (192-233)||(27060350-27060391)
chr5 (192-233)||(33708836-33708877)
chr5 (192-233)||(36886775-36886816)
chr5 (6-91)||(41689277-41689362)
chr5 (192-233)||(41689504-41689545)
chr5 (192-236)||(3152916-3152960)
chr5 (192-236)||(7283464-7283508)
chr5 (192-232)||(19445584-19445624)
chr5 (192-232)||(21025091-21025131)
chr5 (192-236)||(21025529-21025573)
chr5 (192-236)||(27060775-27060819)
chr5 (193-237)||(30687152-30687196)
chr5 (192-236)||(30743999-30744043)
chr5 (192-236)||(38934032-38934076)
chr5 (194-237)||(3214499-3214542)
chr5 (192-226)||(29640954-29640988)
chr5 (192-233)||(3087852-3087893)
chr5 (192-233)||(4879839-4879880)
chr5 (192-225)||(12591559-12591592)
chr5 (192-233)||(20338786-20338827)
chr5 (6-91)||(30140504-30140589)
chr5 (192-233)||(30140734-30140775)
chr5 (192-237)||(30728923-30728968)
chr5 (192-237)||(30729324-30729369)
chr5 (192-233)||(33709391-33709432)
chr5 (26-91)||(33709813-33709878)
chr5 (192-233)||(34715817-34715858)
chr5 (192-233)||(36886348-36886389)
chr5 (192-233)||(42977225-42977266)
chr5 (192-233)||(43353128-43353169)
chr5 (192-236)||(1854233-1854277)
chr5 (192-224)||(1855302-1855334)
chr5 (192-236)||(2192110-2192154)
chr5 (192-236)||(3025619-3025663)
chr5 (192-236)||(4880268-4880312)
chr5 (192-236)||(7282748-7282792)
chr5 (192-232)||(20757073-20757113)
chr5 (192-236)||(26324427-26324471)
chr5 (192-236)||(26909096-26909140)
chr5 (192-236)||(29640531-29640575)
chr5 (192-236)||(30686441-30686485)
[»] scaffold0009 (4 HSPs)
scaffold0009 (2-90)||(108545-108633)
scaffold0009 (6-74)||(225437-225505)
scaffold0009 (192-233)||(108774-108815)
scaffold0009 (192-232)||(225635-225675)
[»] chr2 (47 HSPs)
chr2 (1-88)||(17836964-17837051)
chr2 (13-91)||(42781020-42781098)
chr2 (19-91)||(19486204-19486276)
chr2 (6-91)||(10876571-10876654)
chr2 (1-88)||(9920912-9920999)
chr2 (6-88)||(32677186-32677268)
chr2 (2-91)||(2952755-2952844)
chr2 (1-74)||(28607218-28607291)
chr2 (192-236)||(3707196-3707240)
chr2 (192-236)||(11870162-11870206)
chr2 (192-236)||(35361555-35361599)
chr2 (25-91)||(19486111-19486177)
chr2 (6-91)||(9545775-9545860)
chr2 (192-237)||(35362333-35362378)
chr2 (192-232)||(10876389-10876429)
chr2 (192-232)||(19485929-19485969)
chr2 (192-232)||(42781240-42781280)
chr2 (6-69)||(10050211-10050274)
chr2 (192-237)||(1693811-1693856)
chr2 (192-233)||(3706419-3706460)
chr2 (192-233)||(9545638-9545679)
chr2 (192-233)||(9920726-9920767)
chr2 (192-233)||(11870942-11870983)
chr2 (20-69)||(18096507-18096556)
chr2 (192-233)||(19170383-19170424)
chr2 (192-233)||(28607454-28607495)
chr2 (192-236)||(11446304-11446348)
chr2 (192-231)||(2952986-2953025)
chr2 (194-233)||(4292613-4292652)
chr2 (193-236)||(16725382-16725425)
chr2 (193-232)||(45208393-45208432)
chr2 (192-222)||(1996392-1996422)
chr2 (192-222)||(6346185-6346215)
chr2 (194-232)||(14749267-14749305)
chr2 (1-91)||(24520863-24520953)
chr2 (194-236)||(45208017-45208059)
chr2 (6-91)||(4292782-4292867)
chr2 (195-236)||(5252376-5252417)
chr2 (192-233)||(10050007-10050048)
chr2 (192-237)||(11704760-11704805)
chr2 (192-233)||(19485503-19485544)
chr2 (192-233)||(19486419-19486460)
chr2 (192-237)||(42883387-42883432)
chr2 (192-236)||(16726105-16726149)
chr2 (192-236)||(21094844-21094888)
chr2 (192-236)||(26818711-26818755)
chr2 (192-236)||(26825537-26825581)
[»] scaffold0385 (2 HSPs)
scaffold0385 (20-88)||(8303-8371)
scaffold0385 (192-226)||(8123-8157)
[»] scaffold0057 (2 HSPs)
scaffold0057 (1-91)||(20579-20669)
scaffold0057 (192-233)||(20396-20437)
[»] scaffold0883 (1 HSPs)
scaffold0883 (194-233)||(187-226)
[»] scaffold0381 (1 HSPs)
scaffold0381 (26-85)||(9591-9650)
[»] scaffold0095 (1 HSPs)
scaffold0095 (194-233)||(43980-44019)
[»] scaffold0051 (2 HSPs)
scaffold0051 (194-241)||(53507-53554)
scaffold0051 (192-226)||(62258-62292)
[»] scaffold0759 (2 HSPs)
scaffold0759 (192-233)||(5729-5770)
scaffold0759 (26-74)||(5908-5956)
[»] scaffold0121 (4 HSPs)
scaffold0121 (192-233)||(18089-18130)
scaffold0121 (192-236)||(17728-17772)
scaffold0121 (192-236)||(22890-22934)
scaffold0121 (192-233)||(23291-23332)
[»] scaffold0069 (2 HSPs)
scaffold0069 (192-233)||(11998-12039)
scaffold0069 (1-74)||(11770-11843)
[»] scaffold0047 (2 HSPs)
scaffold0047 (192-236)||(29439-29483)
scaffold0047 (193-236)||(28728-28771)
[»] scaffold0005 (2 HSPs)
scaffold0005 (192-236)||(7050-7094)
scaffold0005 (193-236)||(7763-7806)
[»] scaffold0283 (1 HSPs)
scaffold0283 (192-222)||(8418-8448)
[»] scaffold0122 (1 HSPs)
scaffold0122 (192-237)||(2524-2569)
[»] scaffold0038 (1 HSPs)
scaffold0038 (192-233)||(33615-33656)
[»] scaffold0010 (1 HSPs)
scaffold0010 (192-237)||(36326-36371)
[»] scaffold0242 (1 HSPs)
scaffold0242 (192-236)||(5729-5773)
[»] scaffold0016 (1 HSPs)
scaffold0016 (192-236)||(95006-95050)


Alignment Details
Target: chr7 (Bit Score: 71; Significance: 3e-32; HSPs: 70)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 44804522 - 44804604
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  44804522 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggtt 44804604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 29467753 - 29467835
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  ||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  29467753 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29467835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 34872174 - 34872256
Alignment:
Q  9 atactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||| || |||||||||||||| ||||| |||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  34872174 atactagtaagaaaagaaatgtcctttgaacttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 34872256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 35157066 - 35156995
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||||||||||||||| || ||||||||||||||| |||||||| |||| |||||||    
T  35157066 aaaagaaatgtcacttgaatttaccattttgcccctataaggggcaatttggtaatctacttatcggttgag 35156995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 9 - 91
Target Start/End: Complemental strand, 29684195 - 29684113
Alignment:
Q  9 atactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||  ||||||||||| ||||||||||||||||||  || ||||||||||||||| |||||||| | ||||||||||    
T  29684195 atactaatataaaaagaaatgtgccttgaatttaccattttacccctataaggggcaatttggtaatctactaattggttgag 29684113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 7857093 - 7857009
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||||||||||||||||||||||| ||||||   ||||| ||| |||||  ||||||||||||||||||||    
T  7857093 tatatactaataagaaaagaaatgtcccttgaatttaccgttttgtttctataa-gggtaatttgataatctatttattggttgag 7857009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 11840518 - 11840447
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||||| ||||  |||| ||||||||||    
T  11840518 aaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 11840447  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 21601041 - 21600970
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||||| ||||||||||||||||| || ||||||||||||||| ||||  |||| ||||||||||    
T  21601041 aaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 21600970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 3791481 - 3791563
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  |||||||||||||  || ||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  3791481 tatatacttatattaaaagaaatgtcctatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 3791563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 20761672 - 20761716
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  20761672 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 20761716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 29487219 - 29487263
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  29487219 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 29487263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 33233955 - 33233911
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  33233955 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 33233911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 34286052 - 34286008
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  34286052 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 34286008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 24684698 - 24684636
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| |  ||||||||||||||| |||||||| |||||||||    
T  24684698 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 24684636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 7856866 - 7856825
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  7856866 ccaaattcagttgtttctacattgccgttgtgggagattaag 7856825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 29486442 - 29486483
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  29486442 ccaaattcagttgtttctacattgccgttgtgggagattaag 29486483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 33234733 - 33234688
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  33234733 ccaaattcagttgcttctacattgccgttgtgggagattaagatat 33234688  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 39651233 - 39651148
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||  || | ||||||||||    
T  39651233 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattactaattggttgag 39651148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 19037656 - 19037612
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||    
T  19037656 ccaaattcagttgtttctacactgccgttgtgagaaattaagata 19037612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 20716980 - 20717024
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||| ||||||||||||    
T  20716980 ccaaattcagttgtttctacactgccgttgtgagaaattaagata 20717024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 39276615 - 39276683
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    |||||||| |||  ||||||||||||||||||||||||||||||| || ||||| ||| ||||| ||||    
T  39276615 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaa 39276683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 44804751 - 44804791
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  44804751 caaattcagttgtttctacattgccgttgtgggagattaag 44804791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 17169024 - 17169111
Alignment:
Q  4 tatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||| |||  ||||||||||||| ||||||||||||||||| || ||| | ||||||||| ||||  || ||||||| ||||    
T  17169024 tatatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 17169111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 42993746 - 42993785
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  42993746 aaattcagttgtttctacattgccgttgtgggagattaag 42993785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 4848566 - 4848612
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatatt 238  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  4848566 ccaaattcagttgcttctacattgccgttgtgggagattaaggtatt 4848612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 232
Target Start/End: Complemental strand, 38437883 - 38437845
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  38437883 aaattcagttgtttctacattgccgttgtgggagattaa 38437845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 3791707 - 3791748
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  3791707 ccaaattcagttgcttctacattgccgttgtgggagattaag 3791748  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 9143475 - 9143546
Alignment:
Q  6 tatatactaataggaaaagaaatg---tcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    ||||||||||||  |||||||||    ||||||||||||||||||||| || ||||||||||||||| ||||    
T  9143475 tatatactaatataaaaagaaataatatcccttgaatttaccattttgcccctataaggggcaatttggtaa 9143546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 9143662 - 9143703
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  9143662 ccaaattcagttgcttctacattgccgttgtgggagattaag 9143703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 9144220 - 9144261
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  9144220 ccaaattcagttgcttctacattgccgttgtgggagattaag 9144261  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 9144777 - 9144818
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  9144777 ccaaattcagttgcttctacattgccgttgtgggagattaag 9144818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 17169255 - 17169296
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  17169255 ccaaattcagttgcttctacattgccgttgtgggagattaag 17169296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 19038427 - 19038386
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  19038427 ccaaattcagttgcttctacattgccgttgtgggagattaag 19038386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 20716209 - 20716250
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  20716209 ccaaattcagttgcttctacattgccgttgtgggagattaag 20716250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 20760896 - 20760937
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  20760896 ccaaattcagttgcttctacattgccgttgtgggagattaag 20760937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 34286829 - 34286788
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  34286829 ccaaattcagttgcttctacattgccgttgtgggagattaag 34286788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 34872396 - 34872437
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  34872396 ccaaattcagttgtttctacattgccgttgtggaagattaag 34872437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 688085 - 688133
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    ||||||| ||||||||||||||||| || ||||||||||||||| ||||    
T  688085 aatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 688133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 31899846 - 31899806
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  31899846 ccaaattcagttgcttctacattgccgttgtgggagattaa 31899806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 34127409 - 34127453
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||||||||||||  |||||||||||| |||||||||    
T  34127409 ccaaattcagttgtttctacaccgccgttgtgggagattaagata 34127453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 688261 - 688295
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggga 226  Q
    ||||||||||||| |||||||||||||||||||||    
T  688261 ccaaattcagttgcttctacattgccgttgtggga 688295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Original strand, 42914077 - 42914119
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||| |||| |||||||||||||||| |||||||||    
T  42914077 aaattcagttgcttctgcattgccgttgtgggagattaagata 42914119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 689531 - 689564
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggg 225  Q
    ||||||||||||| ||||||||||||||||||||    
T  689531 ccaaattcagttgcttctacattgccgttgtggg 689564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 4495335 - 4495290
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||||||||| |||||| |||||||| | ||||||||    
T  4495335 ccaaattcagttgtttctaaattgccattgtgggagactaagatat 4495290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 7856442 - 7856401
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  7856442 ccaaattcagttgcttctacattgccgttgtggaagattaag 7856401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 11840313 - 11840272
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||    
T  11840313 ccaaactcagttgcttctacattgccgttgtgggagattaag 11840272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 19516817 - 19516858
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||||| |||||||| ||||||    
T  19516817 ccaaattcagttgcttctacattgccattgtgggagattaag 19516858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 59
Target Start/End: Complemental strand, 21670877 - 21670824
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataa 59  Q
    |||||||| |||  |||||||||||||||||||||||| |||||| || |||||    
T  21670877 tatatacttatattaaaagaaatgtcccttgaatttactattttgcccctataa 21670824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 23302247 - 23302206
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||| ||||||||||| | ||||||    
T  23302247 ccaaattcagttgtttctacactgccgttgtggtagattaag 23302206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 29683974 - 29683933
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  29683974 ccaaattcagttgcttctacattgacgttgtgggagattaag 29683933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 232
Target Start/End: Original strand, 33028703 - 33028740
Alignment:
Q  195 aattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    |||||||||| ||||||||||||||||||||| |||||    
T  33028703 aattcagttgcttctacattgccgttgtgggagattaa 33028740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 35156850 - 35156809
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  35156850 ccaaattcagttgcttctacattgccgttgtggaagattaag 35156809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 39651005 - 39650964
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  39651005 ccaaattcagttgcttctacattgccgttgtggaagattaag 39650964  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 44805148 - 44805189
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  44805148 ccaaattcagttgcttctacattgccgttgtggaagattaag 44805189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 48529817 - 48529776
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||| || ||||||||||||||||||||| ||||||    
T  48529817 ccaaattcagctgcttctacattgccgttgtgggagattaag 48529776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 48530018 - 48529933
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||| ||||||||||| || |||  |||||||||| ||||  || ||||||| ||||    
T  48530018 tatatacttatattaaaagaaatgtcctttgaaattaccattttgcccctattgggggcaatttggtaaattaattattggctgag 48529933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 688813 - 688853
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||| ||||||||||| ||||||||| ||||||    
T  688813 caaattcagttgcttctacattgctgttgtgggagattaag 688853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 14306047 - 14306091
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  14306047 ccaaattcagttgcttctacactgccattgtgggagattaagata 14306091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 17469345 - 17469389
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| || |||||| ||| |||||||||    
T  17469345 ccaaattcagttgtttctacactgtcgttgtaggagattaagata 17469389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 17583869 - 17583825
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| || |||||| ||| |||||||||    
T  17583869 ccaaattcagttgtttctacactgtcgttgtaggagattaagata 17583825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 19517236 - 19517280
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||    
T  19517236 ccaaattcagttgcttctacactgccgttgttggagattaagata 19517280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 21893487 - 21893527
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||| ||||||| |||||    
T  21893487 ccaaattcagttgcttctacattgccgctgtgggagattaa 21893527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 23771399 - 23771355
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  23771399 ccaaattcagttgcttctacactgccattgtgggagattaagata 23771355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 38541485 - 38541441
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  38541485 ccaaattcaattgcttctacactgccgttgtgggagattaagata 38541441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 38542153 - 38542109
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  38542153 ccaaattcaattgcttctacactgccgttgtgggagattaagata 38542109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 42685019 - 42685059
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||| ||||| ||||||||||||||||||||| ||||||    
T  42685019 caaattaagttgcttctacattgccgttgtgggagattaag 42685059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 42830328 - 42830284
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||    
T  42830328 ccaaattcagttgcttctacactgccgttgttggagattaagata 42830284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 42912636 - 42912676
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||| ||||| ||||||||||||||||||||| |||||    
T  42912636 ccaaatttagttgcttctacattgccgttgtgggagattaa 42912676  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 47167849 - 47167805
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||||||||||||  ||||||||| || |||||||||    
T  47167849 ccaaattcagttgtttctacaccgccgttgtgagagattaagata 47167805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 47169603 - 47169647
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  47169603 ccaaattcaattgcttctacactgccgttgtgggagattaagata 47169647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 71; Significance: 3e-32; HSPs: 96)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 71; E-Value: 3e-32
Query Start/End: Original strand, 9 - 91
Target Start/End: Original strand, 24547336 - 24547418
Alignment:
Q  9 atactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||    
T  24547336 atactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctatttattggttgag 24547418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 6 - 90
Target Start/End: Original strand, 51347490 - 51347574
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttga 90  Q
    |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||||    
T  51347490 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctatttattggttga 51347574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 4 - 91
Target Start/End: Original strand, 13171625 - 13171712
Alignment:
Q  4 tatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  13171625 tatatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 13171712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 36743286 - 36743201
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| ||||||||||||||||| ||||||||||||||||  ||||||||||||||| |||||||| ||||||||||||    
T  36743286 tatatactaataagaaaagaaatgtcccttaaatttaccattttgtctctataaggggcaatttggtaatctacttattggttgag 36743201  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 50120042 - 50119957
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||| ||||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  50120042 tatatactaataagaaaaggaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 50119957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 3757728 - 3757813
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||||||||| | ||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  3757728 tatatactaataagaaaagaaatgttcattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 3757813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 54; E-Value: 4e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 20588564 - 20588649
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||||||||||||||||||| ||||||||| |  ||||||||||||||| |||||| | ||||||||||||    
T  20588564 tatatactaataagaaaagaaatgtcccttgaattcaccattttgcctctataaggggcaatttggtaatccacttattggttgag 20588649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 29712386 - 29712454
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  29712386 aaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 29712454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 30529349 - 30529278
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||| ||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  30529349 aaaagaaatatcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30529278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 39406321 - 39406234
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||| |||||||| |||  ||||||||||| ||||||||||||||||| | || ||||||||| ||||| |||||||| |||||||||    
T  39406321 atatctatatacttatataaaaagaaatgttccttgaatttaccatttagcccctataaggggtaatttggtaatctacttattggtt 39406234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 8956938 - 8957000
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  8956938 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8957000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 8986910 - 8986972
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  8986910 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8986972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 24948371 - 24948289
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||  | ||||||||||||||| | |||||| |||||||||    
T  24948371 tatatacttatataaaaagaaatgtcctttgaatttaccattttgctcctataaggggcaatttggaaatctacttattggtt 24948289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 37349808 - 37349870
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  37349808 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 37349870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 43021894 - 43021976
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||||||| |||||||||||| ||||||||||||||| ||| |  ||| ||| ||||||| |||||||| |||||||||    
T  43021894 tatatactaataagaaaagaaatgttccttgaatttaccatcttgcctctattaggtgcaatttggtaatctacttattggtt 43021976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 53991636 - 53991554
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  ||||||||||| || || ||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  53991636 tatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 53991554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 3821283 - 3821198
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||  || | ||||||||||    
T  3821283 tatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 3821198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 16895991 - 16896072
Alignment:
Q  10 tactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||||   ||||||||||||||||| |||||| || |||||||||| |||| |||||||||| ||||||||||    
T  16895991 tactaataagaaaatccatgtcccttgaatttacaattttgcccttataaggggctatttggtaatctattaattggttgag 16896072  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 39716802 - 39716717
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||||||||    
T  39716802 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 39716717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 10263313 - 10263269
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  10263313 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 10263269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 21561142 - 21561186
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  21561142 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 21561186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 24081413 - 24081369
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  24081413 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 24081369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 26928266 - 26928222
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  26928266 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 26928222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 43328649 - 43328693
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  43328649 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 43328693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 51347684 - 51347728
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  51347684 caaattcagttgtttctacattgccgttgtgggagattaagatat 51347728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 17730449 - 17730520
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||| | |||||||||||||||||  | ||||||||||||||| |||||||| | ||||||||||    
T  17730449 aaaagaaatgtgctttgaatttaccattttgctcctataaggggcaatttggtaatctactaattggttgag 17730520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 6 - 84
Target Start/End: Complemental strand, 35716383 - 35716305
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttatt 84  Q
    |||||||| |||  ||||||||||| || || ||||||||||||| || ||||||||||||||| |||||||| |||||    
T  35716383 tatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttatt 35716305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 47559545 - 47559499
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatatt 238  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||||    
T  47559545 ccaaattcagttgcttctacattgccgttgtgggagattaagatatt 47559499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 13171842 - 13171883
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  13171842 ccaaattcagttgtttctacattgccgttgtgggagattaag 13171883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 15704337 - 15704378
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  15704337 ccaaattcagttgtttctacattgccgttgtgggagattaag 15704378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 19587108 - 19587149
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  19587108 ccaaattcagttgtttctacattgccgttgtgggagattaag 19587149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 30529162 - 30529121
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  30529162 ccaaattcagttgtttctacattgccgttgtgggagattaag 30529121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 5752473 - 5752521
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  5752473 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 5752521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 50119853 - 50119813
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||||||||||||||||||||||||| ||||||    
T  50119853 caaattcagttgtttctacattgccgttgtgggagattaag 50119813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 51448699 - 51448743
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| ||||||||||| |||||||||||    
T  51448699 ccaaattcagttgtttctacactgccgttgtggaaaattaagata 51448743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 56002848 - 56002804
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  56002848 ccaaattcagttgtttctacactgccgttgtgggagattaagata 56002804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 9888954 - 9888895
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattg 85  Q
    |||||||| |||||||||||||||| || |||||||| |||||| |||||||| ||||||    
T  9888954 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 9888895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 26873690 - 26873651
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  26873690 aaattcagttgtttctacattgccgttgtgggagattaag 26873651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 2116306 - 2116347
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  2116306 ccaaattcagttgcttctacattgccgttgtgggagattaag 2116347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 3821060 - 3821019
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  3821060 ccaaattcagttgcttctacattgccgttgtgggagattaag 3821019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 5752643 - 5752684
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  5752643 ccaaattcagttgcttctacattgccgttgtgggagattaag 5752684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 12682613 - 12682572
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  12682613 ccaaattcagttgcttctacattgccgttgtgggagattaag 12682572  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 17730659 - 17730700
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  17730659 ccaaattcagttgcttctacattgccgttgtgggagattaag 17730700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 20588789 - 20588830
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  20588789 ccaaattcagttgtttctacattgccgttgtgcgagattaag 20588830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 21560365 - 21560406
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  21560365 ccaaattcagttgcttctacattgccgttgtgggagattaag 21560406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 24082192 - 24082151
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  24082192 ccaaattcagttgcttctacattgccgttgtgggagattaag 24082151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 24547563 - 24547604
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  24547563 ccaaattcagttgtttctacattgccgttgtggaagattaag 24547604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 26929021 - 26928980
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  26929021 ccaaattcagttgcttctacattgccgttgtgggagattaag 26928980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 35498261 - 35498220
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  35498261 ccaaattcagttgcttctacattgccgttgtgggagattaag 35498220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 35498617 - 35498532
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||||  |||||||||| |||||||||||| ||||||| || ||||| || |||||| ||||  || | ||||||||||    
T  35498617 tatatactaatataaaaagaaatggcccttgaatttatcattttgcccctataaaggacaatttggtaaattactaattggttgag 35498532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 35716157 - 35716116
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  35716157 ccaaattcagttgcttctacattgccgttgtgggagattaag 35716116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 36743059 - 36743018
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  36743059 ccaaattcagttgtttctacattgccgttgttggagattaag 36743018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 39716576 - 39716535
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||||||||||||||| |||||||||| ||||||    
T  39716576 ccaaattcagttgtttctacattgtcgttgtgggagattaag 39716535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 43327872 - 43327913
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  43327872 ccaaattcagttgcttctacattgccgttgtgggagattaag 43327913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 47560086 - 47560045
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||| |||||| |||||||||||||||||||||||||    
T  47560086 ccaaattcaattgtttttacattgccgttgtgggaaattaag 47560045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 51447949 - 51447990
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  51447949 ccaaattcagttgcttctacattgccgttgtgggagattaag 51447990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 52799254 - 52799295
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  52799254 ccaaattcagttgcttctacattgccgttgtgggagattaag 52799295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 53339100 - 53339141
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  53339100 ccaaattcagttgcttctacattgccgttgtgggatattaag 53339141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 578461 - 578421
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  578461 caaattcagttgcttctacattgccgttgtgggagattaag 578421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 578675 - 578607
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||||||| | |  ||||||||||||| || |||||||| |||||| |||||||| |||||||||    
T  578675 aaaagaaatgtctcattgatttaccattttgcccctataagggacaatttggtaatctacttattggtt 578607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 5753193 - 5753233
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  5753193 caaattcagttgcttctacattgccgttgtgggagattaag 5753233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 13626058 - 13626102
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||  ||||||||||||||||||||| |||||||||    
T  13626058 ccaaattcagtttcttctacattgccgttgtgggagattaagata 13626102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 14832649 - 14832605
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||    
T  14832649 ccaaattcagttgcttctacattgccattgtgggagattaagata 14832605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 15657221 - 15657177
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  15657221 ccaaattcagttgcttctacactgccgttgtgggagattaagata 15657177  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 15657940 - 15657896
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||    
T  15657940 ccaaattcagttgtttctacactgccattgtgggagattaagata 15657896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 16896216 - 16896256
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  16896216 ccaaattcagttgcttctacattgccgttgtgggagattaa 16896256  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 20589212 - 20589252
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  20589212 ccaaattcagttgcttctacattgccgttgtgggagattaa 20589252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 36854144 - 36854188
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||||||| |||| ||||||||||||| |||||||||    
T  36854144 ccaaattcagttgtttttacactgccgttgtgggagattaagata 36854188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 56002165 - 56002121
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  56002165 ccaaattcagttgcttctacactgccgttgtgggagattaagata 56002121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 56003285 - 56003245
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  56003285 ccaaattcagttgcttctacattgccgttgtgggagattaa 56003245  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 7647765 - 7647722
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||  ||||||||||||||||||||| ||||||||||    
T  7647765 aaattcagtttcttctacattgccgttgtgggagattaagatat 7647722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #72
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 14831937 - 14831894
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  14831937 caaattcagttgcttctacactgccgttgtgggagattaagata 14831894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #73
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 23476757 - 23476800
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  23476757 caaattcagttgcttctacactgccgttgtgggagattaagata 23476800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #74
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 743794 - 743764
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgt 222  Q
    |||||||||||||||||||||||||||||||    
T  743794 ccaaattcagttgtttctacattgccgttgt 743764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #75
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 10264090 - 10264056
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggga 226  Q
    ||||||||||||| |||||||||||||||||||||    
T  10264090 ccaaattcagttgcttctacattgccgttgtggga 10264056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #76
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 15517625 - 15517655
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgt 222  Q
    |||||||||||||||||||||||||||||||    
T  15517625 ccaaattcagttgtttctacattgccgttgt 15517655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #77
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 50033703 - 50033764
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||  |||||||||||||||| || ||||| ||||||||| |||||||| |||||||||    
T  50033703 aatgtcctatgaatttaccattttgcccttataa-gggcaatttggtaatctacttattggtt 50033764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #78
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 3757953 - 3757994
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||| | ||||||||||||||||||||||| ||||||    
T  3757953 ccaaattcaatagtttctacattgccgttgtgggagattaag 3757994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #79
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 13172267 - 13172308
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  13172267 ccaaattcagttgcttctacattgccgttgtggaagattaag 13172308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #80
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 13625673 - 13625714
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||  ||||||||||||||||||||| ||||||    
T  13625673 ccaaattcagtttcttctacattgccgttgtgggagattaag 13625714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #81
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 20589637 - 20589678
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  20589637 ccaaattcagttgcttctacattgccgttgtggaagattaag 20589678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #82
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 21352004 - 21352045
Alignment:
Q  195 aattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||| ||||||| ||||||||||||| |||||||||    
T  21352004 aattcagttgcttctacactgccgttgtgggagattaagata 21352045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #83
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 23476323 - 23476368
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||| ||||||||||||||| | ||||||||    
T  23476323 ccaaattcagttgcttctaaattgccgttgtgggagaataagatat 23476368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #84
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 24547988 - 24548029
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  24547988 ccaaattcagttgcttctacattgccgttgtggaagattaag 24548029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #85
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 46104399 - 46104440
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||| ||||||||| ||||||    
T  46104399 ccaaattcagttgcttctacattgctgttgtgggagattaag 46104440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #86
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 50119429 - 50119388
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  50119429 ccaaattcagttgcttctacattgccgttgtggaagattaag 50119388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #87
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 2775511 - 2775551
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| |||||||||| |||||||||| |||||    
T  2775511 ccaaattcagttgcttctacattgtcgttgtgggagattaa 2775551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #88
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 7646684 - 7646640
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||| |||||| ||||||| ||||||||||||| |||||||||    
T  7646684 ccaaatccagttgcttctacactgccgttgtgggacattaagata 7646640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #89
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 17697565 - 17697609
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||| ||||||| |||||||||    
T  17697565 ccaaattcagttgcttctacactgccgctgtgggagattaagata 17697609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #90
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 21352712 - 21352756
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| || |||||| ||| |||||||||    
T  21352712 ccaaattcagttgtttctacactgtcgttgtaggagattaagata 21352756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #91
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 33505347 - 33505303
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  33505347 ccaaattcagttgcttctacactgccattgtgggagattaagata 33505303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #92
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 34059692 - 34059648
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  34059692 ccaaattcagttgcttctacactgccattgtgggagattaagata 34059648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #93
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 36742633 - 36742601
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgg 224  Q
    ||||||||||||| |||||||||||||||||||    
T  36742633 ccaaattcagttgcttctacattgccgttgtgg 36742601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #94
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 36853427 - 36853471
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  36853427 ccaaattcagttgcttctacaatgccattgtgggagattaagata 36853471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #95
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 41986995 - 41986951
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||||||| ||||||| | |||||||||    
T  41986995 ccaaattcagttgcttctacattgcggttgtggtagattaagata 41986951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #96
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Complemental strand, 47560303 - 47560259
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttg 50  Q
    |||||||| |||  ||||| |||||||||||||||||||||||||    
T  47560303 tatatacttatattaaaagtaatgtcccttgaatttaccattttg 47560259  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 70; Significance: 1e-31; HSPs: 44)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 9737837 - 9737752
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||  ||||||||||||||||||||    
T  9737837 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttgataatctatttattggttgag 9737752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 4 - 88
Target Start/End: Complemental strand, 4897581 - 4897497
Alignment:
Q  4 tatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||||| |||  ||||||||||||||||||||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  4897581 tatatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 4897497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 246176 - 246220
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  246176 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 246220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 12583773 - 12583729
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  12583773 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 12583729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 9737608 - 9737567
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  9737608 ccaaattcagttgtttctacattgccgttgtgggagattaag 9737567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 9981118 - 9981077
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  9981118 ccaaattcagttgtttctacattgccgttgtgggagattaag 9981077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 74
Target Start/End: Complemental strand, 15045636 - 15045563
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    |||| |||||||| |||  ||||||||||||||||||||||||||||||| || ||||| ||| ||||| ||||    
T  15045636 atatctatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaagggtaatttggtaa 15045563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 28193123 - 28193164
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  28193123 ccaaattcagttgtttctacattgccgttgtgggagattaag 28193164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 33975206 - 33975247
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  33975206 ccaaattcagttgtttctacattgccgttgtgggagattaag 33975247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 6969360 - 6969312
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  6969360 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 6969312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 33328133 - 33328094
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  33328133 aaattcagttgtttctacattgccgttgtgggagattaag 33328094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 245399 - 245440
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  245399 ccaaattcagttgcttctacattgccgttgtgggagattaag 245440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 1218520 - 1218605
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| | ||||||||| ||||  || ||||||| ||||    
T  1218520 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 1218605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 4422526 - 4422567
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  4422526 ccaaattcagttgcttctacattgccgttgtgggagattaag 4422567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 6969171 - 6969130
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  6969171 ccaaattcagttgcttctacattgccgttgtgggagattaag 6969130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 12584524 - 12584483
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  12584524 ccaaattcagttgcttctacattgccgttgtgggagattaag 12584483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 18312941 - 18312986
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||    
T  18312941 ccaaattcagttgcttctacattgccgttgtggaagattaagatat 18312986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 24443929 - 24444014
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||| ||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||| ||||    
T  24443929 tatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 24444014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 24444156 - 24444197
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  24444156 ccaaattcagttgcttctacattgccgttgtgggagattaag 24444197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 28573689 - 28573648
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| ||||||||    
T  28573689 ccaaattcagttgcttctacattgccgttgtggaaaattaag 28573648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 35133403 - 35133444
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  35133403 ccaaattcagttgtttctacattgccgctgtgggagattaag 35133444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 221119 - 221163
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||||||||||||||| | |||||||||    
T  221119 ccaaattcagttgcttctacattgccgttgtggaagattaagata 221163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 5759946 - 5759902
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||| |||||| |||||||||||| |||||||||    
T  5759946 ccaaattcagttgttactacatcgccgttgtgggagattaagata 5759902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 11955394 - 11955350
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  11955394 ccaaattcagttgcttctacactgccgttgtgggagattaagata 11955350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 34317892 - 34317936
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  34317892 ccaaattcagttgcttctacactgccgttgtgggagattaagata 34317936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 2519008 - 2519051
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  2519008 caaattcagttgcttctacactgccgttgtgggagattaagata 2519051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Original strand, 1361667 - 1361713
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatatt 238  Q
    |||||||| |||| ||||||||||||||||||||| ||||| |||||    
T  1361667 ccaaattccgttgcttctacattgccgttgtgggagattaatatatt 1361713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 1218753 - 1218794
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  1218753 ccaaattcagttgcttctacattgccgttgtggaagattaag 1218794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 4108185 - 4108226
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||||| |||||||| ||||||    
T  4108185 ccaaattcagttgcttctacattgccattgtgggagattaag 4108226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 18310677 - 18310718
Alignment:
Q  195 aattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||| ||||||| ||||||||||||| |||||||||    
T  18310677 aattcagttgcttctacactgccgttgtgggagattaagata 18310718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 25529468 - 25529509
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||| | ||||||||||||||||||||| ||||||    
T  25529468 ccaaattcagtagcttctacattgccgttgtgggagattaag 25529509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 28192999 - 28193040
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  28192999 ccaaattcagttgcttctacattgccgttgtaggagattaag 28193040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 28233151 - 28233110
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  28233151 ccaaattcagttgcttctacattgtcgttgtgggagattaag 28233110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 1076217 - 1076173
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  1076217 ccaaattcagttgcttctacactgccattgtgggagattaagata 1076173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 7220608 - 7220652
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||    
T  7220608 ccaaattcagttgcttctacactgccgttgtaggagattaagata 7220652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 11954668 - 11954628
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||| ||||||||||||| |||||    
T  11954668 ccaaattcagttgcttctacactgccgttgtgggagattaa 11954628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 14890388 - 14890344
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| || |||||||||| |||||||||    
T  14890388 ccaaattcagttgcttctacactgtcgttgtgggagattaagata 14890344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 14891106 - 14891062
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  14891106 ccaaattcagttgcttctacactgccattgtgggagattaagata 14891062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 17937647 - 17937691
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||  ||||||||||||| |||||||||    
T  17937647 ccaaattcagttgcttctacgctgccgttgtgggagattaagata 17937691  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 50
Target Start/End: Original strand, 18323837 - 18323881
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttg 50  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||    
T  18323837 tatatacttatattaaaagaaatgtcctttgaatttaccattttg 18323881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 18601969 - 18601925
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  18601969 ccaaattcagttgcttctacactgccattgtgggagattaagata 18601925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 21796646 - 21796690
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| || |||| ||||||||||||| |||||||||    
T  21796646 ccaaattcagttgcttatacactgccgttgtgggagattaagata 21796690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 34317163 - 34317203
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||| ||||||||| |||||    
T  34317163 ccaaattcagttgcttctacattgctgttgtgggagattaa 34317203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 34853406 - 34853450
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  34853406 ccaaattcagttgcttctacactgccattgtgggagattaagata 34853450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 70; Significance: 1e-31; HSPs: 71)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 29530646 - 29530561
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||| ||||||||||||    
T  29530646 tatatactaataagaaaagaaatgtcccttgaatttaccattttgtccctataaggggcaatttggtaatctacttattggttgag 29530561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 8528188 - 8528103
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||| ||||| |||||||||||||||    
T  8528188 tatatactaataagaaaagaaatgtcccttgaatttaccattctgtccctataaggggcaatttggtaatatatttattggttgag 8528103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 9 - 88
Target Start/End: Original strand, 35855209 - 35855288
Alignment:
Q  9 atactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    ||||||||| ||||||||||||||||| |||||||||||||| || ||||||||||||||| ||||||||||||||||||    
T  35855209 atactaataagaaaagaaatgtcccttaaatttaccattttgcccctataaggggcaatttggtaatctatttattggtt 35855288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 26102240 - 26102150
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||||||||| |||||||||||||| ||||||||||||||||| || |||||| || ||||| |||||||  ||||||||||||    
T  26102240 atatatatatactaataagaaaagaaatgtcctttgaatttaccattttgcccctataagaggtaatttggtaatctgcttattggttgag 26102150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 19369012 - 19368941
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||||||| |||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  19369012 aaaagaaatgtcccttgattttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19368941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 3 - 88
Target Start/End: Complemental strand, 11955613 - 11955528
Alignment:
Q  3 atatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    ||||||||||| |||  |||||||||||||| || ||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  11955613 atatatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 11955528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 28981904 - 28981817
Alignment:
Q  4 tatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||| |||||   |||||||||||||||||||||||| || ||||||||||||||| |||||| | | ||||||||||    
T  28981904 tatatatactaataagaaaatccatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatcaactaattggttgag 28981817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 22763616 - 22763571
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||    
T  22763616 ccaaattcagttgtttctacattgccgttgtgggagattaagatat 22763571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 915042 - 915086
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  915042 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 915086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 1 - 84
Target Start/End: Original strand, 22473641 - 22473724
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttatt 84  Q
    |||| |||||||| |||  ||||||||||| || || ||||||||||||| || ||||||||||||||| |||||||| |||||    
T  22473641 atatctatatacttatattaaaagaaatgttccatggatttaccattttgcccctataaggggcaatttggtaatctacttatt 22473724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 914262 - 914307
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  914262 ccaaattcagttgcttctacattgccgttgtgggagattaagatat 914307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 4139207 - 4139162
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  4139207 ccaaattcagttgcttctacattgccgttgtgggagattaagatat 4139162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 11602249 - 11602164
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||||  ||||   |||||| |||| |||||||||||| || ||||||||||||||  |||||||||| ||||||||||    
T  11602249 tatatactaatataaaaatccatgtccgttgattttaccattttgcccctataaggggcaattcagtaatctattaattggttgag 11602164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 19368803 - 19368762
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  19368803 ccaaattcagttgtttctacattgccgttgtgggagattaag 19368762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 19894958 - 19894913
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  19894958 ccaaattcagttggttctacattgccgttgtgggagattaagatat 19894913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 22519211 - 22519276
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||| ||||||||||||||||| || ||||||||||||||| ||||  |||| ||||||||||    
T  22519211 aatgtccattgaatttaccattttgcccctataaggggcaatttagtaaattattaattggttgag 22519276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 18682511 - 18682559
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    ||||||||||||||||||||||||| || ||||||||||||||| ||||    
T  18682511 aatgtcccttgaatttaccattttgcccctataaggggcaatttggtaa 18682559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 21732254 - 21732210
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||||||||||||||||| |||||||||    
T  21732254 ccaaattcagttgcttctacattgccgttgtgggagattaagata 21732210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 51245555 - 51245599
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| ||||||||||||| |||||||||    
T  51245555 ccaaattcagttgtttctacactgccgttgtgggagattaagata 51245599  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 40832013 - 40831926
Alignment:
Q  4 tatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||| |||||| |||||   ||||||||||||||||||||||||  | |||||||| |||||  |||||||| | ||||||||||    
T  40832013 tatatatcctaataagaaaatccatgtcccttgaatttaccattttgctcctataagggacaattcggtaatctactaattggttgag 40831926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 52857653 - 52857607
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatatt 238  Q
    ||||||||||||| ||||||||||||||||||||| |||||| ||||    
T  52857653 ccaaattcagttgattctacattgccgttgtgggagattaaggtatt 52857607  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 11955380 - 11955339
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  11955380 ccaaattcagttgcttctacattgccgttgtgggagattaag 11955339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 18682681 - 18682722
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  18682681 ccaaattcagttgcttctacattgccgttgtgggagattaag 18682722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 19895510 - 19895469
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  19895510 ccaaattcagttgcttctacattgccgttgtgggagattaag 19895469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 23190336 - 23190381
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||||||||||||||||||||||||||||||| || ||||| ||||    
T  23190336 ccaaattcagttgtttctacattgccgttgtgagagattaatatat 23190381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 26777711 - 26777670
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  26777711 ccaaattcagttgcttctacattgccgttgtgggagattaag 26777670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 28981674 - 28981633
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  28981674 ccaaattcagttgcttctacattgccgttgtgggagattaag 28981633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 29530423 - 29530382
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||| ||| ||||||    
T  29530423 ccaaattcagttgtttctacattgccgttgttggagattaag 29530382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 30814631 - 30814672
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  30814631 ccaaattcagttgcttctacattgccgttgtgggagattaag 30814672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 48522955 - 48522914
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  48522955 ccaaattcagttgcttctacattgccgttgtgggagattaag 48522914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 51245124 - 51245165
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  51245124 ccaaattcagttgcttctacattgccgttgtgggagattaag 51245165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 53800725 - 53800766
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  53800725 ccaaattcagttgcttctacattgccgttgtgggagattaag 53800766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 54508991 - 54509032
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  54508991 ccaaattcagttgcttctacattgccgttgtgggagattaag 54509032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Original strand, 8393585 - 8393633
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    ||||||| ||||||||||||||||| || ||||||||||||||| ||||    
T  8393585 aatgtcctttgaatttaccattttgcccctataaggggcaatttggtaa 8393633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 9563450 - 9563490
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  9563450 ccaaattcagttggttctacattgccgttgtgggagattaa 9563490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 11331363 - 11331323
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    |||||||||||||||| |||||||||||||||||| |||||    
T  11331363 ccaaattcagttgtttttacattgccgttgtgggagattaa 11331323  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 16339586 - 16339630
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| || |||||||||||||||||| |||||||||    
T  16339586 ccaaattcagttgcttttacattgccgttgtgggagattaagata 16339630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 18683231 - 18683271
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||| ||||||||||||||||||||| ||||||    
T  18683231 caaattcagttgcttctacattgccgttgtgggagattaag 18683271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 21702639 - 21702595
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  21702639 ccaaattcagttgcttctacactgccgttgtgggagattaagata 21702595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 33872207 - 33872263
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggg 62  Q
    ||||||||||||  |||||||||||||  ||||||||||||||||||| || |||||    
T  33872207 tatatactaatataaaaagaaatgtccgatgaatttaccattttgtccctagaaggg 33872263  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 48974554 - 48974598
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| ||||||||||||| |||| ||||    
T  48974554 ccaaattcagttgtttctacactgccgttgtgggagattaggata 48974598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 52855811 - 52855767
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  52855811 ccaaattcagttgcttctacactgccgttgtgggagattaagata 52855767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 55297414 - 55297343
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||||||| ||||||||||||||  || ||||| ||| ||||| ||||  |||| ||||||||||    
T  55297414 aaaagaaatgtccctcgaatttaccattttacccctataaagggtaatttggtaaattattaattggttgag 55297343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 8393758 - 8393792
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggga 226  Q
    ||||||||||||| |||||||||||||||||||||    
T  8393758 ccaaattcagttgcttctacattgccgttgtggga 8393792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 16342864 - 16342902
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  16342864 aaattcagttgcttctacattgccgttgtgggagattaa 16342902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 19895711 - 19895645
Alignment:
Q  25 aaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| ||||||||||||||||| || ||||| ||||||||| ||||  || | ||||||||||    
T  19895711 aaatgtccattgaatttaccattttgcccttataaagggcaatttggtaaattagtaattggttgag 19895645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 2847143 - 2847102
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||||| |||||||| ||||||    
T  2847143 ccaaattcagttggttctacattgcccttgtgggagattaag 2847102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 8395032 - 8395065
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggg 225  Q
    ||||||||||||| ||||||||||||||||||||    
T  8395032 ccaaattcagttgcttctacattgccgttgtggg 8395065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 18743190 - 18743145
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||| | ||||||||||| ||||||||||    
T  18743190 ccaaattcagttgcttctacactaccgttgtgggagattaagatat 18743145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 22473870 - 22473911
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||||||||||| || ||||||    
T  22473870 ccaaattcagttgcttctacattgccgttgtgagagattaag 22473911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 22519412 - 22519453
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||| ||||||| ||||||||||||||||||||| ||||||    
T  22519412 ccaaactcagttgcttctacattgccgttgtgggagattaag 22519453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 29530111 - 29530070
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  29530111 ccaaattcagttgcttctacattgccgttgtggaagattaag 29530070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 35434478 - 35434523
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||| |||||||| ||||||| ||||||||||||| ||||||||||    
T  35434478 ccaatttcagttgcttctacactgccgttgtgggagattaagatat 35434523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 36171280 - 36171235
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||| |||||||| ||||||| ||||||||||||| ||||||||||    
T  36171280 ccaatttcagttgcttctacactgccgttgtgggagattaagatat 36171235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 44077496 - 44077455
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||| ||| ||||||    
T  44077496 ccaaattcagttgcttctacattgccgttgtaggagattaag 44077455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 50736838 - 50736879
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||  |||||||||||||||||| |||||||||    
T  50736838 ccaaattcagttacttctacattgccgttgtgagaaattaag 50736879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 50776017 - 50775976
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||  |||||||||||||||||| |||||||||    
T  50776017 ccaaattcagttacttctacattgccgttgtgagaaattaag 50775976  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 4139412 - 4139364
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    ||||||| |||| ||||||||||||||| ||| ||||||||||| ||||    
T  4139412 aatgtccattgattttaccattttgtccctattaggggcaatttggtaa 4139364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 5238162 - 5238202
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||  |||||||||||||||||||    
T  5238162 ccaaattcagttgcttctactctgccgttgtgggaaattaa 5238202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 6108031 - 6107987
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  6108031 ccaaattcagttgcttctacactgccattgtgggagattaagata 6107987  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 8394316 - 8394356
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||| ||||||||||| ||||||||| ||||||    
T  8394316 caaattcagttgcttctacattgctgttgtgggagattaag 8394356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 23191438 - 23191482
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||| | |||||||||    
T  23191438 ccaaattcagttggttctacactgccgttgtggaagattaagata 23191482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Original strand, 33872418 - 33872458
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||| ||| ||||||||||||||||||||| ||||||    
T  33872418 caaattcaattgcttctacattgccgttgtgggagattaag 33872458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 35090247 - 35090203
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||| || ||||||| ||||||||||||| |||||||||    
T  35090247 ccaaattcagctgcttctacaatgccgttgtgggagattaagata 35090203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 44076716 - 44076672
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||  ||| | |||||||||||||||||||||    
T  44076716 ccaaattcagttgttttcacacttccgttgtgggaaattaagata 44076672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 49110252 - 49110296
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| || ||||||||||||||| || |||||||||    
T  49110252 ccaaattcagttgcttatacattgccgttgtgcgagattaagata 49110296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 50767620 - 50767576
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| || |||| ||||||||||||| |||||||||    
T  50767620 ccaaattcagttgcttttacactgccgttgtgggagattaagata 50767576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 52469215 - 52469171
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||||||| ||||||| | |||||||||    
T  52469215 ccaaattcagttgcttctacattgcggttgtggtagattaagata 52469171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 52856841 - 52856797
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||| ||| ||||||| ||||||||||||| |||||||||    
T  52856841 ccaaattcaattgcttctacactgccgttgtgggagattaagata 52856797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 54509421 - 54509465
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||| ||||||||||||||||| | |||||||| |||||||||    
T  54509421 ccaaatacagttgtttctacattgtcattgtgggagattaagata 54509465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 54510159 - 54510203
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| || |||||||||| |||||||||    
T  54510159 ccaaattcagttgcttctacactgtcgttgtgggagattaagata 54510203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 70; Significance: 1e-31; HSPs: 59)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 2 - 91
Target Start/End: Complemental strand, 46626413 - 46626324
Alignment:
Q  2 tatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  46626413 tatatatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 46626324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 19322429 - 19322344
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| ||||| |||||||||||||||||||||||||| || ||||||||||||||| ||| |||| ||||||||||||    
T  19322429 tatatactaataagaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtattctacttattggttgag 19322344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 33075741 - 33075659
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  ||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  33075741 tatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 33075659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 1826795 - 1826877
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  ||||| ||||||||||||||||||||||||| |  ||||||||||||||| ||||||||||||||||||    
T  1826795 tatatacttatattaaaagtaatgtcccttgaatttaccattttggctctataaggggcaatttggtaatctatttattggtt 1826877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 22198992 - 22198910
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  ||||||||||||||||||||||| ||||||| || ||||||||||||||| |||||||| |||||||||    
T  22198992 tatatacttatattaaaagaaatgtcccttgaatttatcattttgcccctataaggggcaatttggtaatctacttattggtt 22198910  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 38894757 - 38894839
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||||||| ||||  |||||||| ||||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  38894757 tatatactaataagaaagtaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 38894839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 19400733 - 19400818
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||   |||||||||||||||||||||||| |||||||||||| ||||  |||||||||| ||||||||||    
T  19400733 tatatactaataagaaaatccatgtcccttgaatttaccattttgcccatataaggggtaattcggtaatctattaattggttgag 19400818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 29844971 - 29844884
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||| |||||||| |||  |||||||||||||| || ||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  29844971 atatctatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 29844884  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 6 - 88
Target Start/End: Original strand, 42678376 - 42678458
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  |||||||||||||| ||||||||||||||| ||| |||||||||||||||  ||||||| |||||||||    
T  42678376 tatatacttatataaaaagaaatgtcccatgaatttaccattttatccctataaggggcaatttgataatctacttattggtt 42678458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 51971358 - 51971272
Alignment:
Q  4 tatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||| |||||   |||||||||||| |||||||||||||| ||||| ||| ||||| |||||||||| ||||||||||    
T  51971358 tatatatactaataagaaaattcatgtcccttgaagttaccattttgtccctataa-gggtaatttggtaatctattaattggttgag 51971272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Original strand, 50557850 - 50557913
Alignment:
Q  27 atgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||| ||||||||||||||||||| ||||||||||||||| |||||||| | ||||||||||    
T  50557850 atgtcccatgaatttaccattttgtcc-tataaggggcaatttggtaatctactaattggttgag 50557913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 1367293 - 1367378
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||| ||||    
T  1367293 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 1367378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 38894982 - 38895023
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  38894982 ccaaattcagttgtttctacattgccgttgtgggagattaag 38895023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 20 - 88
Target Start/End: Original strand, 10766202 - 10766270
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||||||||  || ||||||||||||| || |||||||| |||||| |||||||| |||||||||    
T  10766202 aaaagaaatgtcctatggatttaccattttgcccctataagggtcaatttggtaatctacttattggtt 10766270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 19322200 - 19322160
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  19322200 ccaaattcagttgtttctacattgccgttgtgggagattaa 19322160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 28570747 - 28570806
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattg 85  Q
    |||||||| |||||||||||||||| || |||||||| |||||| |||||||| ||||||    
T  28570747 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 28570806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Original strand, 52306071 - 52306134
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattt 69  Q
    |||||||| |||  ||||||||| |||||| |||||||||||||| || |||||||||||||||    
T  52306071 tatatacttatataaaaagaaatatccctttaatttaccattttgcccctataaggggcaattt 52306134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 28627194 - 28627232
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  28627194 aaattcagttgtttctacattgccgttgtgggagattaa 28627232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 4890100 - 4890185
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| |  ||| ||||||||||| ||||  || ||||||| ||||    
T  4890100 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcctctattaggggcaatttggtaaattaattattggctgag 4890185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 4890329 - 4890370
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  4890329 ccaaattcagttgcttctacattgccgttgtgggagattaag 4890370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 5426442 - 5426483
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  5426442 ccaaattcagttgcttctacattgccgttgtgggagattaag 5426483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 10766417 - 10766458
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  10766417 ccaaattcagttgcttctacattgccgttgtgggagattaag 10766458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 16300411 - 16300476
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||||||||||||||  | ||||||||||||||| ||||  || | ||||||||||    
T  16300411 aatgtcccttgaatttaccattttgctcctataaggggcaatttggtaaattactaattggttgag 16300476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 16300617 - 16300658
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  16300617 ccaaattcagttgtttctacattgccgttgtgagagattaag 16300658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 17364461 - 17364420
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  17364461 ccaaattcagttgcttctacattgccgttgtgggagattaag 17364420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 17364688 - 17364603
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||| ||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||| ||||    
T  17364688 tatatacttatattaaaagaaatatcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 17364603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 23912143 - 23912098
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||    
T  23912143 ccaaattcagttgcttctacattgccgttgtggaagattaagatat 23912098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 29188158 - 29188117
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  29188158 ccaaattcagttgcttctacattgccgttgtgggagattaag 29188117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 29188385 - 29188300
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| | ||||||||| ||||  || ||||||| ||||    
T  29188385 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 29188300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 29844739 - 29844698
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  29844739 ccaaattcagttgcttctacattgccgttgtgggagattaag 29844698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 33359702 - 33359787
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| | ||||||||| ||||  || ||||||| ||||    
T  33359702 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggcaatttggtaaattaattattggctgag 33359787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 38847995 - 38847954
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  38847995 ccaaattcagttgcttctacattgccgttgtgggagattaag 38847954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 42678603 - 42678644
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  42678603 ccaaattcagttgcttctacattgccgttgtgggagattaag 42678644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 46626186 - 46626145
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||| ||||| ||||||    
T  46626186 ccaaattcagttgtttctacattgccgttatgggagattaag 46626145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 26 - 91
Target Start/End: Original strand, 47134726 - 47134791
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||| ||||||||||||||||| || ||||||||||||||| ||||  || | ||||||||||    
T  47134726 aatgtccattgaatttaccattttgcccctataaggggcaatttggtaaattactaattggttgag 47134791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 52523961 - 52523916
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||||||    
T  52523961 ccaaattcagttgcttctacactgccgttgtgggagattaagatat 52523916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 16034494 - 16034450
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||| ||||||||||| ||||||||||||| |||||||||    
T  16034494 ccaaattcaattgtttctacactgccgttgtgggagattaagata 16034450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 38847640 - 38847596
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  38847640 ccaaattcagttgcttctacactgccgttgtgggagattaagata 38847596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 40794897 - 40794853
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  40794897 ccaaattcagttgcttctacactgccgttgtgggagattaagata 40794853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 194 - 238
Target Start/End: Complemental strand, 40795301 - 40795257
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaagatatt 238  Q
    ||||||||||| |||||||||| |||||||||| |||||||||||    
T  40795301 aaattcagttgcttctacattgtcgttgtgggagattaagatatt 40795257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 43116255 - 43116295
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  43116255 ccaaattcagttgcttctacattgccgttgtgggagattaa 43116295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 45002398 - 45002442
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||| ||||||||||||| ||||||||||||| |||||||||    
T  45002398 ccaaattaagttgtttctacactgccgttgtgggagattaagata 45002442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 48337189 - 48337229
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  48337189 ccaaattcagttgcttctacattgccgttgtgggagattaa 48337229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 18812078 - 18812121
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  18812078 caaattcagttgcttctacactgccgttgtgggagattaagata 18812121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 27793400 - 27793443
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| |||||||||| |||||||||| |||||||||    
T  27793400 caaattcagttgcttctacattgtcgttgtgggagattaagata 27793443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 31617534 - 31617577
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  31617534 caaattcagttgcttctacactgccgttgtgggagattaagata 31617577  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 41832437 - 41832394
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  41832437 caaattcagttgcttctacactgccgttgtgggagattaagata 41832394  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 41965318 - 41965275
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  41965318 caaattcagttgcttctacactgccgttgtgggagattaagata 41965275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 238
Target Start/End: Complemental strand, 16035149 - 16035103
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatatt 238  Q
    ||||||||| ||| ||||||||||||||||||||| |||||| ||||    
T  16035149 ccaaattcaattgcttctacattgccgttgtgggagattaaggtatt 16035103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 17668938 - 17668972
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggga 226  Q
    ||||||||||||| |||||||||||||||||||||    
T  17668938 ccaaattcagttgcttctacattgccgttgtggga 17668972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 1367512 - 1367553
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  1367512 ccaaattcagttgcttctacattgtcgttgtgggagattaag 1367553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 38895396 - 38895437
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  38895396 ccaaattcagttgtttctacatttccgttgtggaagattaag 38895437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 52306295 - 52306328
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggg 225  Q
    ||||||||||||| ||||||||||||||||||||    
T  52306295 ccaaattcagttgcttctacattgccgttgtggg 52306328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 36678557 - 36678601
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||| ||||| ||||||| ||||||||||||| |||||||||    
T  36678557 ccaaattaagttgcttctacactgccgttgtgggagattaagata 36678601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 40794189 - 40794145
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||||||||| || |||||||||    
T  40794189 ccaaattcagttgcttctacactgccgttgtgagagattaagata 40794145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 44404871 - 44404911
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| |||||||||| |||||||||| |||||    
T  44404871 ccaaattcagttgcttctacattgtcgttgtgggagattaa 44404911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 44405978 - 44406022
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||| ||| |||||||||    
T  44405978 ccaaattcagttgcttctacactgccgttgtaggagattaagata 44406022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 48337572 - 48337616
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||| | |||| |||||||| |||||||||    
T  48337572 ccaaattcagttgtttctagactgccattgtgggagattaagata 48337616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 52524684 - 52524640
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  52524684 ccaaattcagttgcttctacactgccattgtgggatattaagata 52524640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 66; Significance: 3e-29; HSPs: 65)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 36776406 - 36776491
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  36776406 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 36776491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 24053916 - 24054001
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| ||||||||||||||||||||||||||||||||  | ||||||||||||||| |||||||| ||||||||||||    
T  24053916 tatatactaataagaaaagaaatgtcccttgaatttaccattttgctcctataaggggcaatttggtaatctacttattggttgag 24054001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 20 - 91
Target Start/End: Original strand, 25346050 - 25346121
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||||| ||||||||||||||||| |  ||||||||||||||| |||||||| ||||||||||||    
T  25346050 aaaagaaatgtccattgaatttaccattttgcctctataaggggcaatttggtaatctacttattggttgag 25346121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 13 - 88
Target Start/End: Complemental strand, 40587770 - 40587695
Alignment:
Q  13 taataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    ||||| ||||| |||||||| ||||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  40587770 taataagaaaataaatgtccattgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 40587695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 25 - 91
Target Start/End: Original strand, 41972977 - 41973043
Alignment:
Q  25 aaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||||||||||||||| || ||||||||||||||| |||||||| | ||||||||||    
T  41972977 aaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctactaattggttgag 41973043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 10 - 91
Target Start/End: Original strand, 9472158 - 9472238
Alignment:
Q  10 tactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||||||||||||||||||| ||||||||||| |  ||||| ||||||||| |||||||| ||||||||||||    
T  9472158 tactaataagaaaagaaatgtcccttgaaattaccattttgcctctataa-gggcaatttggtaatctacttattggttgag 9472238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 4 - 91
Target Start/End: Complemental strand, 40616181 - 40616094
Alignment:
Q  4 tatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||| |||||   ||||||||||||||||||||||||  | |||||| |||||||| |||||||| | ||||||||||    
T  40616181 tatatatactaataagaaaatccatgtcccttgaatttaccattttgctcctataagaggcaatttggtaatctactaattggttgag 40616094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 8760723 - 8760785
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  8760723 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8760785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 25836330 - 25836268
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  25836330 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 25836268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 20666907 - 20666863
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  20666907 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 20666863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 44217022 - 44216978
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  44217022 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 44216978  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 27 - 91
Target Start/End: Complemental strand, 44389069 - 44389005
Alignment:
Q  27 atgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||||||||||||  || ||||||||| ||||| |||||||||| ||||||||||    
T  44389069 atgtcccttgaatttaccatttttcccttataaggggtaatttggtaatctattaattggttgag 44389005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 78
Target Start/End: Original strand, 45434992 - 45435064
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatcta 78  Q
    |||||||||||| |||||   ||||| |||||||||||||||||| || ||||||||||||||| ||||||||    
T  45434992 tatatactaataagaaaatccatgtcacttgaatttaccattttgcccttataaggggcaatttggtaatcta 45435064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 20 - 91
Target Start/End: Complemental strand, 42245803 - 42245732
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||||| ||||||||| || ||||||||| |||||  ||||||| ||||||||||||    
T  42245803 aaaagaaatgtcacttgaattcaccattttgcccctataaggggtaatttgataatctacttattggttgag 42245732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 1942811 - 1942873
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| |  ||||||||||||||| |||||||| |||||||||    
T  1942811 aatgtcccatgaatttaccattttgcctctataaggggcaatttggtaatctacttattggtt 1942873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 6480550 - 6480509
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  6480550 ccaaattcagttgtttctacattgccgttgtgggagattaag 6480509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 9472379 - 9472420
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  9472379 ccaaattcagttgtttctacattgccgttgtgggagattaag 9472420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 24054134 - 24054175
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  24054134 ccaaattcagttgtttctacattgccgttgtgggagattaag 24054175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 36776633 - 36776674
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  36776633 ccaaattcagttgtttctacattgccgttgtgggagattaag 36776674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 30552246 - 30552202
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| ||||||||||||||| |||||||    
T  30552246 ccaaattcagttgtttctacactgccgttgtgggaaactaagata 30552202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 6 - 62
Target Start/End: Original strand, 41152670 - 41152726
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggg 62  Q
    |||||||| |||  |||||||||||||||||||||||||||||||||| ||| ||||    
T  41152670 tatatacttatataaaaagaaatgtcccttgaatttaccattttgtccctatcaggg 41152726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 8162840 - 8162781
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattg 85  Q
    |||||||| |||||||||||||||| || |||||||| |||||| |||||||| ||||||    
T  8162840 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 8162781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 12253147 - 12253108
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  12253147 aaattcagttgtttctacattgccgttgtgggagattaag 12253108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 12258690 - 12258651
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  12258690 aaattcagttgtttctacattgccgttgtgggagattaag 12258651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 39441647 - 39441686
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  39441647 aaattcagttgtttctacattgccgttgtgggagattaag 39441686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 26 - 88
Target Start/End: Original strand, 32844171 - 32844233
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| | |||||||||||||| ||  |||||||||||||| |||||||| |||||||||    
T  32844171 aatgtcccataaatttaccattttgccccgataaggggcaatttggtaatctacttattggtt 32844233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 4466280 - 4466239
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  4466280 ccaaattcagttgcttctacattgccgttgtgggagattaag 4466239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 7389431 - 7389472
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  7389431 ccaaattcagttgcttctacattgccgttgtgggagattaag 7389472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 18378661 - 18378620
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  18378661 ccaaattcagttgcttctacattgccgttgtgggagattaag 18378620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 18378887 - 18378802
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||| ||||||| |  ||| ||||||||||| ||||  || ||||||||||||    
T  18378887 tatatacttatattaaaagaaatgtcctttgaatttatcattttgcctctattaggggcaatttggtaaattaattattggttgag 18378802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 20667684 - 20667643
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  20667684 ccaaattcagttgcttctacattgccgttgtgggagattaag 20667643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 25344747 - 25344788
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||| ||||||||||||||||||    
T  25344747 ccaaattcagttgcttctacattaccgttgtgggaaattaag 25344788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 30553021 - 30552980
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  30553021 ccaaattcagttgcttctacattgccgttgtgggagattaag 30552980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 40587581 - 40587540
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||| ||||||| ||||||    
T  40587581 ccaaattcagttgtttctacattgccgctgtgggagattaag 40587540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 41534116 - 41534075
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  41534116 ccaaattcagttgcttctacattgccgttgtgggagattaag 41534075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 44217805 - 44217764
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  44217805 ccaaattcagttgcttctacattgccgttgtgggagattaag 44217764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 25616314 - 25616274
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  25616314 ccaaattcagttgcttctacattgccgttgtgggagattaa 25616274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 30823340 - 30823384
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||| |||||||| |||||||||    
T  30823340 ccaaattcagttgtttctacactgccattgtgggagattaagata 30823384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 33426647 - 33426603
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  33426647 ccaaattcagttgcttctacactgccgttgtgggagattaagata 33426603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 41152796 - 41152836
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  41152796 ccaaattcagttgcttctacattgccgttgtgggagattaa 41152836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 44388864 - 44388824
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    |||||||||||||||||||||||| |||||||||| |||||    
T  44388864 ccaaattcagttgtttctacattgtcgttgtgggagattaa 44388824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 6480741 - 6480702
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  6480741 caaattcagttgcttctacattgccgttgtgggagattaa 6480702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 42813278 - 42813235
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  42813278 caaattcagttgcttctacactgccgttgtgggagattaagata 42813235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 45435216 - 45435255
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  45435216 aaattcagttgcttctacattgccgttgtgggagattaag 45435255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 195 - 237
Target Start/End: Complemental strand, 23523993 - 23523951
Alignment:
Q  195 aattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||| ||||| ||||||||||||||||||||| ||||||||||    
T  23523993 aatttagttgcttctacattgccgttgtgggagattaagatat 23523951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 23969872 - 23969842
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgt 222  Q
    |||||||||||||||||||||||||||||||    
T  23969872 ccaaattcagttgtttctacattgccgttgt 23969842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 193 - 235
Target Start/End: Original strand, 38960282 - 38960324
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagat 235  Q
    |||||||||||||||||||| | ||||||||||| ||||||||    
T  38960282 caaattcagttgtttctacactaccgttgtgggagattaagat 38960324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 42064934 - 42064904
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgt 222  Q
    |||||||||||||||||||||||||||||||    
T  42064934 ccaaattcagttgtttctacattgccgttgt 42064904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 44937078 - 44937108
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgt 222  Q
    |||||||||||||||||||||||||||||||    
T  44937078 ccaaattcagttgtttctacattgccgttgt 44937108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 3750517 - 3750550
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggg 225  Q
    ||||||||||||||||||||| ||||||||||||    
T  3750517 ccaaattcagttgtttctacactgccgttgtggg 3750550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 9472804 - 9472845
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  9472804 ccaaattcagttgcttctacattgccgttgtggaagattaag 9472845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 19243448 - 19243489
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||    
T  19243448 ccaaatttagttgcttctacattgccgttgtgggagattaag 19243489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 19316632 - 19316673
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||| ||||| ||||||||||||||||||||| ||||||    
T  19316632 ccaaatttagttgcttctacattgccgttgtgggagattaag 19316673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 30822922 - 30822967
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||| ||||||||||||||| | ||||||||    
T  30822922 ccaaattcagttgattctaaattgccgttgtgggagagtaagatat 30822967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 40587165 - 40587124
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||| ||||||||| | ||||||    
T  40587165 ccaaattcagttgtttctacatttccgttgtggaagattaag 40587124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Original strand, 41153516 - 41153549
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggg 225  Q
    ||||||||||||||||||||| ||||||||||||    
T  41153516 ccaaattcagttgtttctacactgccgttgtggg 41153549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 42245589 - 42245548
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  42245589 ccaaattcagttgcttctacattgccgttgtggaagattaag 42245548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 42782310 - 42782355
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||| |||| |||||||| ||||||||||    
T  42782310 ccaaattcagttgcttctacactgccattgtgggagattaagatat 42782355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 9758400 - 9758444
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| || |||||||||| |||||||||    
T  9758400 ccaaattcagttgcttctacactgtcgttgtgggagattaagata 9758444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 14081728 - 14081684
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  14081728 ccaaattcagttgcttctacactgccattgtgggagattaagata 14081684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 19244162 - 19244206
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| || ||||||    
T  19244162 ccaaattcagttgcttctacactgccgttgtgggagataaagata 19244206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 19317346 - 19317390
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| || ||||||    
T  19317346 ccaaattcagttgcttctacactgccgttgtgggagataaagata 19317390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 27277959 - 27278003
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  27277959 ccaaattcagttgcttctacactgccattgtgggagattaagata 27278003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 42813991 - 42813947
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| || |||||||||| |||||||||    
T  42813991 ccaaattcagttgcttctacactgtcgttgtgggagattaagata 42813947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 193 - 233
Target Start/End: Complemental strand, 42814422 - 42814382
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||| |||||||||| |||||||||| ||||||    
T  42814422 caaattcagttgcttctacattgacgttgtgggagattaag 42814382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 63; Significance: 2e-27; HSPs: 63)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 17643475 - 17643385
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||| |||||||||||| ||||| |||||||||||||||||| ||||||| || ||||||||||||||| |||||||||||||||||||||    
T  17643475 atatctatatactaataagaaaataaatgtcccttgaatttatcattttgcccttataaggggcaatttggtaatctatttattggttgag 17643385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 62; E-Value: 7e-27
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 36887053 - 36886968
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||| |||||    
T  36887053 tatatactaataagaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattgattgag 36886968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 30754424 - 30754496
Alignment:
Q  19 gaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||| ||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  30754424 gaaaagaaatgtcctttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 30754496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 3088116 - 3088031
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||| ||||||||||||||||||||||||| || ||||||||||||||| ||||  |||| ||||||||||    
T  3088116 tatatacttatattaaaagtaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaaattattaattggttgag 3088031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 6305514 - 6305452
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  6305514 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 6305452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 12592553 - 12592471
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  |||||||||||||| ||||||||||| |||  || ||||||||||||||| |||||||| |||||||||    
T  12592553 tatatacttatataaaaagaaatgtcccatgaatttaccagtttacccctataaggggcaatttggtaatctacttattggtt 12592471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 26 - 88
Target Start/End: Complemental strand, 43138611 - 43138549
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  43138611 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 43138549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 25698802 - 25698717
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||||||||    
T  25698802 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggttgag 25698717  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 17643276 - 17643232
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||||||||||||||||||||||||||||||||| ||||||||||    
T  17643276 caaattcagttgtttctacattgccgttgtgggagattaagatat 17643232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 37460651 - 37460695
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  37460651 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 37460695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 3026328 - 3026373
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  3026328 ccaaattcagttgcttctacattgccgttgtgggagattaagatat 3026373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 25698576 - 25698535
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||||| ||||||    
T  25698576 ccaaattcagttgtttctacattgccgttgtgggagattaag 25698535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 37459873 - 37459918
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  37459873 ccaaattcagttgcttctacattgccgttgtgggagattaagatat 37459918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 193 - 237
Target Start/End: Complemental strand, 26323752 - 26323708
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||||||||||||||||||| ||||||||||||| ||||||||||    
T  26323752 caaattcagttgtttctacactgccgttgtgggagattaagatat 26323708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 30754632 - 30754672
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  30754632 ccaaattcagttgtttctacattgccgttgtgggagattaa 30754672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 42977691 - 42977651
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  42977691 ccaaattcagttgtttctacattgccgttgtgggagattaa 42977651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Complemental strand, 754509 - 754450
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattg 85  Q
    |||||||| |||||||||||||||| || |||||||| |||||| |||||||| ||||||    
T  754509 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 754450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 27 - 90
Target Start/End: Complemental strand, 12422408 - 12422345
Alignment:
Q  27 atgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttga 90  Q
    |||||| |||| |||||||||||| || ||||||||||||||| |||||||| | |||||||||    
T  12422408 atgtcctttgattttaccattttgcccctataaggggcaatttggtaatctactaattggttga 12422345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 9698033 - 9698071
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||| |||||    
T  9698033 aaattcagttgtttctacattgccgttgtgggagattaa 9698071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 40 - 90
Target Start/End: Complemental strand, 42977883 - 42977833
Alignment:
Q  40 ttaccattttgtccatataaggggcaattttgtaatctatttattggttga 90  Q
    ||||||||||| || ||||||||||||||| |||||||| |||||||||||    
T  42977883 ttaccattttgcccctataaggggcaatttggtaatctacttattggttga 42977833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 12592327 - 12592286
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  12592327 ccaaattcagttgcttctacattgccgttgtgggagattaag 12592286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 63
Target Start/End: Complemental strand, 26602253 - 26602196
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataagggg 63  Q
    |||||||| |||  ||||||||||||||||||||||||||||||  || |||||||||    
T  26602253 tatatacttatataaaaagaaatgtcccttgaatttaccattttacccttataagggg 26602196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 27060350 - 27060391
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  27060350 ccaaattcagttgcttctacattgccgttgtgggatattaag 27060391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 33708877 - 33708836
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  33708877 ccaaattcagttgcttctacattgccgttgtgggagattaag 33708836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 36886816 - 36886775
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| | ||||||    
T  36886816 ccaaattcagttgtttctacattgccgttgtggaagattaag 36886775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 41689277 - 41689362
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| | ||||||||| ||||  || ||||||| ||||    
T  41689277 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattatgggcaatttggtaaattaattattggctgag 41689362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 41689504 - 41689545
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  41689504 ccaaattcagttgcttctacattgccgttgtgggagattaag 41689545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 3152960 - 3152916
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| |||||||||||||| |||||| |||||||||    
T  3152960 ccaaattcagttgcttctacattgccgtcgtgggagattaagata 3152916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 7283464 - 7283508
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  7283464 ccaaattcagttgcttctacactgccgttgtgggagattaagata 7283508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 19445584 - 19445624
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  19445584 ccaaattcagttgcttctacattgccgttgtgggagattaa 19445624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 21025091 - 21025131
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| ||||||||||||||||||||| |||||    
T  21025091 ccaaattcagttgcttctacattgccgttgtgggagattaa 21025131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 21025529 - 21025573
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  21025529 ccaaattcagttgcttctacactgccgttgtgggagattaagata 21025573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 27060775 - 27060819
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  27060775 ccaaattcagttgcttctacactgccgttgtgggagattaagata 27060819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 193 - 237
Target Start/End: Original strand, 30687152 - 30687196
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||||||||||| ||||||| ||||||||||||| ||||||||||    
T  30687152 caaattcagttgcttctacactgccgttgtgggagattaagatat 30687196  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 30744043 - 30743999
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| || |||||||||| |||||||||    
T  30744043 ccaaattcagttgtttctacactgtcgttgtgggagattaagata 30743999  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 38934032 - 38934076
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  38934032 ccaaattcagttgcttctacactgccgttgtgggagattaagata 38934076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 237
Target Start/End: Complemental strand, 3214542 - 3214499
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||| |||||||||| |||||||||| ||||||||||    
T  3214542 aaattcagttgcttctacattgtcgttgtgggagattaagatat 3214499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 29640988 - 29640954
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggga 226  Q
    ||||||||||||| |||||||||||||||||||||    
T  29640988 ccaaattcagttgcttctacattgccgttgtggga 29640954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 3087893 - 3087852
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  3087893 ccaaattcagttgcttctacattgccgttgtggaagattaag 3087852  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 4879839 - 4879880
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  4879839 ccaaattcagttgcttctacattgtcgttgtgggagattaag 4879880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 225
Target Start/End: Complemental strand, 12591592 - 12591559
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggg 225  Q
    ||||||||||||||||||||| ||||||||||||    
T  12591592 ccaaattcagttgtttctacactgccgttgtggg 12591559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 20338786 - 20338827
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||    
T  20338786 ccaaattcagttgcttctacactgccgttgtgggagattaag 20338827  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 91
Target Start/End: Original strand, 30140504 - 30140589
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| | ||| ||||| ||||  || | ||||||||||    
T  30140504 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaagggtaatttggtaaattactaattggttgag 30140589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 30140734 - 30140775
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  30140734 ccaaattcagttgcttctacattgccgttgtggaagattaag 30140775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 30728923 - 30728968
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||| ||||||||||||||| | ||||||||    
T  30728923 ccaaattcagttgcttctaaattgccgttgtgggagagtaagatat 30728968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 30729324 - 30729369
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    |||||| |||||||||||||| |||| |||||||| ||||||||||    
T  30729324 ccaaatccagttgtttctacactgccattgtgggagattaagatat 30729369  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 33709432 - 33709391
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| || |||||||||||| ||||||||||||    
T  33709432 ccaaattcagttgcttttacattgccgttatgggaaattaag 33709391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 26 - 91
Target Start/End: Complemental strand, 33709878 - 33709813
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||||||||||||||||||||||  || ||||| ||||||||| ||||  || | ||||||||||    
T  33709878 aatgtcccttgaatttaccattttacccctataaagggcaatttggtaaattagtaattggttgag 33709813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 34715817 - 34715858
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  34715817 ccaaattcagttgcttctacattgtcgttgtgggagattaag 34715858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 36886389 - 36886348
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  36886389 ccaaattcagttgcttctacattgccgttgtggaagattaag 36886348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 42977266 - 42977225
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  42977266 ccaaattcagttgcttctacattgccgttgtggaagattaag 42977225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 43353128 - 43353169
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||| ||||||||||||| ||||||    
T  43353128 ccaaattcagttgcttctacactgccgttgtgggagattaag 43353169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 1854277 - 1854233
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| |||||||  |||||||||||| |||||||||    
T  1854277 ccaaattcagttgcttctacaccgccgttgtgggatattaagata 1854233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 224
Target Start/End: Complemental strand, 1855334 - 1855302
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgg 224  Q
    ||||||||||||| |||||||||||||||||||    
T  1855334 ccaaattcagttgcttctacattgccgttgtgg 1855302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 2192110 - 2192154
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  2192110 ccaaattcagttgcttctacactgccattgtgggagattaagata 2192154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 3025619 - 3025663
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| || |||||||||| |||||||||    
T  3025619 ccaaattcagttgcttctacaatgtcgttgtgggagattaagata 3025663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 4880268 - 4880312
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||| ||||||||| |||||||||    
T  4880268 ccaaattcagttgcttctacactgctgttgtgggagattaagata 4880312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 7282748 - 7282792
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  7282748 ccaaattcagttgcttctacactgccattgtgggagattaagata 7282792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 20757073 - 20757113
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||| |||||||||| |||||||||| |||||    
T  20757073 ccaaattcagttgcttctacattgtcgttgtgggagattaa 20757113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 26324471 - 26324427
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  26324471 ccaaattcagttgcttctacactgccattgtgggagattaagata 26324427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 26909140 - 26909096
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| || |||||||||| |||||||||    
T  26909140 ccaaattcagttgcttctacactgtcgttgtgggagattaagata 26909096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 29640575 - 29640531
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  29640575 ccaaattcagttgcttctacagtgccattgtgggagattaagata 29640531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 30686441 - 30686485
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||| |||||||||||||||||| ||| |||| |||||||||    
T  30686441 ccaaattaagttgtttctacattgccattgcgggagattaagata 30686485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 61; Significance: 3e-26; HSPs: 4)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 61; E-Value: 3e-26
Query Start/End: Original strand, 2 - 90
Target Start/End: Original strand, 108545 - 108633
Alignment:
Q  2 tatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttga 90  Q
    |||||||||||||||| |||||||||||||||||||||||||||||||||||  |||||||| ||||| ||||||||  ||||||||||    
T  108545 tatatatatactaataagaaaagaaatgtcccttgaatttaccattttgtccccataaggggtaatttggtaatctacgtattggttga 108633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 6 - 74
Target Start/End: Original strand, 225437 - 225505
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||||||||||||||| ||||    
T  225437 tatatacttatattaaaagaaatgtccattgaatttaccattttgcccctataaggggcaatttggtaa 225505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 108774 - 108815
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||||||||||||||||||||||| || ||||||    
T  108774 ccaaattcagttgtttctacattgccgttgtgagagattaag 108815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009; HSP #4
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 225635 - 225675
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||| ||||||| ||||||||||||||||||||| |||||    
T  225635 ccaaactcagttgcttctacattgccgttgtgggagattaa 225675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 60; Significance: 1e-25; HSPs: 47)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 88
Target Start/End: Original strand, 17836964 - 17837051
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    ||||||||||||| |||  ||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  17836964 atatatatatacttatattaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 17837051  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 13 - 91
Target Start/End: Original strand, 42781020 - 42781098
Alignment:
Q  13 taataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    ||||| |||||||||||||||||||||||| |||||||||| | ||||||||||||| |||||||||||||||||||||    
T  42781020 taataagaaaagaaatgtcccttgaatttatcattttgtccctgtaaggggcaatttggtaatctatttattggttgag 42781098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 19 - 91
Target Start/End: Original strand, 19486204 - 19486276
Alignment:
Q  19 gaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||||||||||||||||||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  19486204 gaaaagaaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggttgag 19486276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 10876654 - 10876571
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||||||||||||||||||||||||||||||| ||   ||||||||||||| |||||||| ||||||||||||    
T  10876654 tatatactaataagaaaagaaatgtcccttgaatttaccattttgccc--ctaaggggcaatttggtaatctacttattggttgag 10876571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 52; E-Value: 6e-21
Query Start/End: Original strand, 1 - 88
Target Start/End: Complemental strand, 9920999 - 9920912
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    ||||||||||||| |||  |||||||||||||| || ||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  9920999 atatatatatacttatattaaaagaaatgtcccatggatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 9920912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 6 - 88
Target Start/End: Complemental strand, 32677268 - 32677186
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||| |||  |||| |||||||||||||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  32677268 tatatacttatattaaaataaatgtcccttgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 32677186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 2 - 91
Target Start/End: Original strand, 2952755 - 2952844
Alignment:
Q  2 tatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||||||| |||  ||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||| ||||    
T  2952755 tatatatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 2952844  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 28607218 - 28607291
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    |||| |||||||| |||  |||| |||||||| |||||||||||||||||||| ||||||||||||||| ||||    
T  28607218 atatctatatacttatattaaaataaatgtccattgaatttaccattttgtccctataaggggcaatttggtaa 28607291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 3707196 - 3707240
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  3707196 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 3707240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 11870206 - 11870162
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  11870206 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 11870162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 35361599 - 35361555
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||||| |||||||||||||||||||||||    
T  35361599 ccaaattcagttgtttctacactgccgttgtgggaaattaagata 35361555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 25 - 91
Target Start/End: Complemental strand, 19486177 - 19486111
Alignment:
Q  25 aaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||| ||| ||||||||| ||||||| || ||||||||||||||| |||||||| ||||||||||||    
T  19486177 aaatatccattgaatttatcattttgcccctataaggggcaatttggtaatctacttattggttgag 19486111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 9545860 - 9545775
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||| ||||    
T  9545860 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 9545775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 35362378 - 35362333
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||||| ||||||||||    
T  35362378 ccaaattcagttgcttctacattgccgttgtgggagattaagatat 35362333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 10876429 - 10876389
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  10876429 ccaaattcagttgtttctacattgccgttgtgggagattaa 10876389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Complemental strand, 19485969 - 19485929
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  19485969 ccaaattcagttgtttctacattgccgttgtgggagattaa 19485929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 192 - 232
Target Start/End: Original strand, 42781240 - 42781280
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||||||||||||||||||||||||||| |||||    
T  42781240 ccaaattcagttgtttctacattgccgttgtgggagattaa 42781280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 6 - 69
Target Start/End: Complemental strand, 10050274 - 10050211
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattt 69  Q
    |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| |||||||||||    
T  10050274 tatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaattt 10050211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 237
Target Start/End: Complemental strand, 1693856 - 1693811
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||||||||||||||| | ||||||||||    
T  1693856 ccaaattcagttgcttctacattgccgttgtggaagattaagatat 1693811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 3706419 - 3706460
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  3706419 ccaaattcagttgcttctacattgccgttgtgggagattaag 3706460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 9545679 - 9545638
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  9545679 ccaaattcagttgcttctacattgccgttgtgggagattaag 9545638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 9920767 - 9920726
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  9920767 ccaaattcagttgcttctacattgccgttgtgggagattaag 9920726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 11870983 - 11870942
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  11870983 ccaaattcagttgcttctacattgccgttgtgggagattaag 11870942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 20 - 69
Target Start/End: Original strand, 18096507 - 18096556
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattt 69  Q
    ||||||||||||| ||||||||||||||||| || ||||||||| |||||    
T  18096507 aaaagaaatgtcctttgaatttaccattttgcccctataaggggtaattt 18096556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 19170424 - 19170383
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  19170424 ccaaattcagttgcttctacattgccgttgtgggagattaag 19170383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 28607454 - 28607495
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  28607454 ccaaattcagttgcttctacattgccgttgtgggagattaag 28607495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 11446304 - 11446348
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  11446304 ccaaattcagttgcttctacactgccgttgtgggagattaagata 11446348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 192 - 231
Target Start/End: Original strand, 2952986 - 2953025
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaatta 231  Q
    ||||||||||||| ||||||||||||||||||||| ||||    
T  2952986 ccaaattcagttgcttctacattgccgttgtgggagatta 2953025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 194 - 233
Target Start/End: Complemental strand, 4292652 - 4292613
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||| ||||||||||||||||||||| ||||||    
T  4292652 aaattcagttgcttctacattgccgttgtgggagattaag 4292613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 16725425 - 16725382
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  16725425 caaattcagttgcttctacactgccgttgtgggagattaagata 16725382  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 232
Target Start/End: Complemental strand, 45208432 - 45208393
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    |||||||||||| ||||||||||||||||||||| |||||    
T  45208432 caaattcagttgcttctacattgccgttgtgggagattaa 45208393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 1996422 - 1996392
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgt 222  Q
    |||||||||||||||||||||||||||||||    
T  1996422 ccaaattcagttgtttctacattgccgttgt 1996392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Complemental strand, 6346215 - 6346185
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgt 222  Q
    |||||||||||||||||||||||||||||||    
T  6346215 ccaaattcagttgtttctacattgccgttgt 6346185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 232
Target Start/End: Original strand, 14749267 - 14749305
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaa 232  Q
    ||||||||||| ||||||||||||||||||||| |||||    
T  14749267 aaattcagttgcttctacattgccgttgtgggagattaa 14749305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 91
Target Start/End: Original strand, 24520863 - 24520953
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||| |||||||| |||  |||||||||||||||||||||||  |||||| |  ||||||| ||||||| ||||  || | ||||||||||    
T  24520863 atatctatatacttatataaaaagaaatgtcccttgaatttataattttgcctctataaggagcaatttggtaaattactaattggttgag 24520953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 194 - 236
Target Start/End: Complemental strand, 45208059 - 45208017
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||||||||| |||| |||||||| |||||||||    
T  45208059 aaattcagttgtttctacactgccattgtgggagattaagata 45208017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 6 - 91
Target Start/End: Complemental strand, 4292867 - 4292782
Alignment:
Q  6 tatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||||||| |||  ||||||||||||| |||||||||||||||||  | ||| | ||||||||| ||||  || ||||||| ||||    
T  4292867 tatatacttatattaaaagaaatgtcctttgaatttaccattttgctcctattaagggcaatttggtaaattaattattggctgag 4292782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 195 - 236
Target Start/End: Original strand, 5252376 - 5252417
Alignment:
Q  195 aattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||| ||||||| ||||||||||||| |||||||||    
T  5252376 aattcagttgcttctacactgccgttgtgggagattaagata 5252417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 10050048 - 10050007
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  10050048 ccaaattcagttgcttctacattgccgttgtggaagattaag 10050007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 11704760 - 11704805
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| || |||| ||||||||||||| ||||||||||    
T  11704760 ccaaattcagttgcttttacactgccgttgtgggagattaagatat 11704805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 19485544 - 19485503
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||| | ||||||    
T  19485544 ccaaattcagttgcttctacattgccgttgtggaagattaag 19485503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 19486419 - 19486460
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    |||||||||||||||||||||||  |||||||||| ||||||    
T  19486419 ccaaattcagttgtttctacattatcgttgtgggagattaag 19486460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 42883387 - 42883432
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| |||||||  |||||||||||| ||||||||||    
T  42883387 ccaaattcagttgcttctacaccgccgttgtgggagattaagatat 42883432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 16726149 - 16726105
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  16726149 ccaaattcagttgcttctacactgccattgtgggagattaagata 16726105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 21094844 - 21094888
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| |||| |||||||| |||||||||    
T  21094844 ccaaattcagttgcttctacactgccattgtgggagattaagata 21094888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 26818711 - 26818755
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||| ||| ||||||| |||| ||||||||||||||||||    
T  26818711 ccaaattcaattgcttctacactgccattgtgggaaattaagata 26818755  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 26825537 - 26825581
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| || |||| ||||||||||||| |||||||||    
T  26825537 ccaaattcagttgcttttacactgccgttgtgggagattaagata 26825581  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385 (Bit Score: 49; Significance: 4e-19; HSPs: 2)
Name: scaffold0385
Description:

Target: scaffold0385; HSP #1
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 20 - 88
Target Start/End: Complemental strand, 8371 - 8303
Alignment:
Q  20 aaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggtt 88  Q
    |||||||||||||| |||||||||||||||| || ||||||||||||||| |||||||| |||||||||    
T  8371 aaaagaaatgtcccatgaatttaccattttgcccctataaggggcaatttggtaatctacttattggtt 8303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0385; HSP #2
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 192 - 226
Target Start/End: Complemental strand, 8157 - 8123
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggga 226  Q
    |||||||||||||||||||||||||||||||||||    
T  8157 ccaaattcagttgtttctacattgccgttgtggga 8123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 2)
Name: scaffold0057
Description:

Target: scaffold0057; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 91
Target Start/End: Complemental strand, 20669 - 20579
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattggttgag 91  Q
    |||| |||||||| |||  ||||||||||||| ||||||||||||||||| || ||| ||||||||||| ||||  || ||||||| ||||    
T  20669 atatctatatacttatattaaaagaaatgtcctttgaatttaccattttgcccctattaggggcaatttggtaaattaattattggctgag 20579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0057; HSP #2
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 20437 - 20396
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  20437 ccaaattcagttgcttctacattgccgttgtgggagattaag 20396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0883 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0883
Description:

Target: scaffold0883; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 187 - 226
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  187 aaattcagttgtttctacattgccgttgtgggagattaag 226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0381 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0381
Description:

Target: scaffold0381; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 26 - 85
Target Start/End: Original strand, 9591 - 9650
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaatctatttattg 85  Q
    |||||||| |||||||||||||||| || |||||||| |||||| |||||||| ||||||    
T  9591 aatgtcccatgaatttaccattttgcccctataagggtcaatttggtaatctacttattg 9650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0095 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0095
Description:

Target: scaffold0095; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 233
Target Start/End: Original strand, 43980 - 44019
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||||||||||||||||||||||| ||||||    
T  43980 aaattcagttgtttctacattgccgttgtgggagattaag 44019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051 (Bit Score: 36; Significance: 0.00000000002; HSPs: 2)
Name: scaffold0051
Description:

Target: scaffold0051; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 194 - 241
Target Start/End: Original strand, 53507 - 53554
Alignment:
Q  194 aaattcagttgtttctacattgccgttgtgggaaattaagatattctt 241  Q
    ||||||||||| ||||||||||||||||||||| |||||| |||||||    
T  53507 aaattcagttgcttctacattgccgttgtgggagattaaggtattctt 53554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0051; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 226
Target Start/End: Original strand, 62258 - 62292
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtggga 226  Q
    ||||||||||||| |||||||||||||||||||||    
T  62258 ccaaattcagttgcttctacattgccgttgtggga 62292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0759
Description:

Target: scaffold0759; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 5770 - 5729
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  5770 ccaaattcagttgcttctacattgccgttgtgggagattaag 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0759; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 26 - 74
Target Start/End: Complemental strand, 5956 - 5908
Alignment:
Q  26 aatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    |||||||| |||||||||||||||| || ||||||||||||||| ||||    
T  5956 aatgtcccatgaatttaccattttgcccctataaggggcaatttggtaa 5908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121 (Bit Score: 34; Significance: 0.0000000003; HSPs: 4)
Name: scaffold0121
Description:

Target: scaffold0121; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 18130 - 18089
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  18130 ccaaattcagttgcttctacattgccgttgtgggagattaag 18089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #2
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 17772 - 17728
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| ||||||||||||| |||||||||    
T  17772 ccaaattcagttgcttctacactgccgttgtgggagattaagata 17728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #3
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 22934 - 22890
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| |||||||||| |||||||||| |||||||||    
T  22934 ccaaattcagttgcttctacattgtcgttgtgggagattaagata 22890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0121; HSP #4
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 23332 - 23291
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||| ||||||||||||||| ||||||    
T  23332 ccaaattcagttgcttctaaattgccgttgtgggagattaag 23291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 34; Significance: 0.0000000003; HSPs: 2)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 192 - 233
Target Start/End: Original strand, 11998 - 12039
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| ||||||||||||||||||||| ||||||    
T  11998 ccaaattcagttgcttctacattgccgttgtgggagattaag 12039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069; HSP #2
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 74
Target Start/End: Original strand, 11770 - 11843
Alignment:
Q  1 atatatatatactaataggaaaagaaatgtcccttgaatttaccattttgtccatataaggggcaattttgtaa 74  Q
    |||| |||||||| |||  ||||||||||||  ||||||||||||||||| |  ||| ||||||||||| ||||    
T  11770 atatctatatacttatattaaaagaaatgtcatttgaatttaccattttgcctttattaggggcaatttggtaa 11843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0047
Description:

Target: scaffold0047; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 29483 - 29439
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||    
T  29483 ccaaattcagttgcttctacattgccattgtgggagattaagata 29439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0047; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Complemental strand, 28771 - 28728
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  28771 caaattcagttgcttctacactgccgttgtgggagattaagata 28728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 33; Significance: 0.000000001; HSPs: 2)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 7050 - 7094
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| |||||||||||| |||||||| |||||||||    
T  7050 ccaaattcagttgcttctacattgccattgtgggagattaagata 7094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 236
Target Start/End: Original strand, 7763 - 7806
Alignment:
Q  193 caaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    |||||||||||| ||||||| ||||||||||||| |||||||||    
T  7763 caaattcagttgcttctacactgccgttgtgggagattaagata 7806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0283 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0283
Description:

Target: scaffold0283; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 192 - 222
Target Start/End: Original strand, 8418 - 8448
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgt 222  Q
    |||||||||||||||||||||||||||||||    
T  8418 ccaaattcagttgtttctacattgccgttgt 8448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0122 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 2524 - 2569
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| ||||||| |||| |||||||| ||||||||||    
T  2524 ccaaattcagttgcttctacactgccattgtgggagattaagatat 2569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0038 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0038
Description:

Target: scaffold0038; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 233
Target Start/End: Complemental strand, 33656 - 33615
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaag 233  Q
    ||||||||||||| |||||||||| |||||||||| ||||||    
T  33656 ccaaattcagttgcttctacattgtcgttgtgggagattaag 33615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 30; Significance: 0.00000008; HSPs: 1)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 192 - 237
Target Start/End: Original strand, 36326 - 36371
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagatat 237  Q
    ||||||||||||| |||||||||| |||||||| | ||||||||||    
T  36326 ccaaattcagttgcttctacattgtcgttgtggaagattaagatat 36371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0242 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0242
Description:

Target: scaffold0242; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Complemental strand, 5773 - 5729
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| || |||| ||||||||||||| |||||||||    
T  5773 ccaaattcagttgcttttacactgccgttgtgggagattaagata 5729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 192 - 236
Target Start/End: Original strand, 95006 - 95050
Alignment:
Q  192 ccaaattcagttgtttctacattgccgttgtgggaaattaagata 236  Q
    ||||||||||||| ||||||| | ||||||||||| |||||||||    
T  95006 ccaaattcagttgcttctacactaccgttgtgggagattaagata 95050  T

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