View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4049_low_34 (Length: 246)
Name: NF4049_low_34
Description: NF4049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4049_low_34 |
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Alignment Details
Target: chr7 (Bit Score: 212; Significance: 1e-116; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 212; E-Value: 1e-116
Query Start/End: Original strand, 18 - 241
Target Start/End: Original strand, 33309175 - 33309398
Alignment:
| Q |
18 |
ggaatatgcttttgaatacattattccattttcccaaagcagatggacctattaaaaaaccagtctagcaaaacaatcacaaagattaggtaatgttttt |
117 |
Q |
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| T |
33309175 |
ggaatatgcttttgaatacattattccattttcccaaagcagatggacctattaaaaaaccagtctagcaaaacaatcacaaagattaggtaatgttttt |
33309274 |
T |
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| Q |
118 |
catatacataaaatatagtatgaaaaatgtaaaggatactcaaatcttcaggagtttaaaaaatgaatcattacaactattagcgaagaaataataatga |
217 |
Q |
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| T |
33309275 |
catatacataaaatatagtatgaaaaatgtaaaggataatcaaatcttcaggagtttaaaaaatgagtcattacaactattagcgaagaaataataatga |
33309374 |
T |
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| Q |
218 |
aatgaaagggttagaataatatac |
241 |
Q |
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| T |
33309375 |
aatgaaagggttagaagaatatac |
33309398 |
T |
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