View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4049_low_7 (Length: 458)
Name: NF4049_low_7
Description: NF4049
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4049_low_7 |
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Alignment Details
Target: chr7 (Bit Score: 401; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 401; E-Value: 0
Query Start/End: Original strand, 17 - 450
Target Start/End: Original strand, 37859191 - 37859624
Alignment:
| Q |
17 |
aataaggagtagtagaaggagaagcaatagcttctaatatcaacctaccaccttcgcgatgaggcctaacatgaacaccaccaaaatcagttattgatgt |
116 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |
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| T |
37859191 |
aataaggagtagtagaaggagaagcaatagcttctaatatcaacctaccaccttcgcgatgaggcctaacatgaacaccaccaaaatcagttattgaagt |
37859290 |
T |
|
| Q |
117 |
gagtggtggaggaaagttacaagaagctttattaactcttctagacacacaattattcatgttgttattgttaacatcatttcttgtgtcagaagaaaat |
216 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859291 |
gagtggtggaggaaagttacaagaagctttattaactcttctagacacacaattattcatgttgttattgttaacatcatttcttgtgtcagaagaaaat |
37859390 |
T |
|
| Q |
217 |
aatgaaacatcaatatcactactttcaccagcattgctaccagtttcactcccaaggctttcagtgcacatttctaagctcttttcacttagcattgatg |
316 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859391 |
aatgaaacatcaatatcactactttcaccagcattgctaccagtttcactcccaaggctttcagtgcacatttctaagctcttttcacttagcattgatg |
37859490 |
T |
|
| Q |
317 |
aggaacgtttcacagtaggatgaacatagactttaccatttgcattttcagttttgttagtttctgttaaagcttgaaggaaactccagctagattttgt |
416 |
Q |
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||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37859491 |
aggaacgtttcacagtaggatgaacatagacgttaccatttgcattttcaattttgttagtttctgttaaagcttgaaggaaactccagctagattttgt |
37859590 |
T |
|
| Q |
417 |
gtcannnnnnncacattcattgttgatgatgatg |
450 |
Q |
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|||| ||||||||||||||||||||||| |
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| T |
37859591 |
gtcatttttttcacattcattgttgatgatgatg |
37859624 |
T |
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