View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4050_high_2 (Length: 744)

Name: NF4050_high_2
Description: NF4050
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4050_high_2
NF4050_high_2
[»] chr4 (51 HSPs)
chr4 (16-652)||(50668544-50669181)
chr4 (84-286)||(50250804-50251006)
chr4 (98-286)||(37827022-37827210)
chr4 (23-337)||(7877534-7877847)
chr4 (15-274)||(48852534-48852793)
chr4 (15-142)||(7908325-7908446)
chr4 (182-337)||(7773938-7774093)
chr4 (184-286)||(48870401-48870503)
chr4 (184-286)||(48886087-48886189)
chr4 (468-537)||(7822585-7822654)
chr4 (473-537)||(7813096-7813160)
chr4 (445-561)||(45372427-45372543)
chr4 (445-561)||(48156797-48156913)
chr4 (182-286)||(48875705-48875809)
chr4 (173-537)||(7771020-7771379)
chr4 (479-537)||(7800253-7800311)
chr4 (173-574)||(7789668-7790064)
chr4 (416-572)||(48870123-48870279)
chr4 (416-572)||(48885809-48885965)
chr4 (438-534)||(49041501-49041597)
chr4 (180-279)||(48170690-48170789)
chr4 (473-539)||(45366619-45366685)
chr4 (80-150)||(48170581-48170651)
chr4 (438-520)||(48891042-48891124)
chr4 (468-574)||(50251201-50251307)
chr4 (110-155)||(7813464-7813509)
chr4 (110-155)||(7822953-7822998)
chr4 (105-144)||(7237767-7237806)
chr4 (105-144)||(7771396-7771435)
chr4 (105-144)||(7790081-7790120)
chr4 (438-520)||(47207567-47207649)
chr4 (473-582)||(7238118-7238227)
chr4 (468-561)||(7904624-7904717)
chr4 (88-145)||(48147744-48147801)
chr4 (83-144)||(48705381-48705442)
chr4 (440-513)||(48875486-48875559)
chr4 (173-241)||(7237823-7237891)
chr4 (440-520)||(7877353-7877433)
chr4 (173-337)||(7908142-7908306)
chr4 (473-561)||(48862833-48862921)
chr4 (89-144)||(7773845-7773900)
chr4 (438-537)||(7907941-7908040)
chr4 (469-516)||(45385181-45385228)
chr4 (15-58)||(48705331-48705374)
chr4 (479-594)||(48902509-48902624)
chr4 (184-231)||(49044310-49044357)
chr4 (659-732)||(49048505-49048579)
chr4 (458-512)||(50672161-50672215)
chr4 (114-147)||(7800629-7800662)
chr4 (186-231)||(33133930-33133975)
chr4 (472-537)||(48735712-48735777)
[»] chr7 (1 HSPs)
chr7 (87-286)||(48883657-48883856)
[»] chr8 (10 HSPs)
chr8 (92-286)||(12200163-12200357)
chr8 (92-286)||(12444591-12444785)
chr8 (410-537)||(15348478-15348605)
chr8 (80-142)||(12195300-12195362)
chr8 (80-142)||(12439728-12439790)
chr8 (181-286)||(12195156-12195261)
chr8 (181-286)||(12439584-12439689)
chr8 (485-520)||(4032326-4032361)
chr8 (468-561)||(12199899-12199992)
chr8 (468-561)||(12444327-12444420)
[»] chr3 (8 HSPs)
chr3 (181-328)||(47452018-47452165)
chr3 (86-149)||(11005978-11006041)
chr3 (86-149)||(11024553-11024616)
chr3 (468-574)||(11006355-11006461)
chr3 (439-561)||(11024901-11025023)
chr3 (212-336)||(11024673-11024797)
chr3 (195-305)||(11015644-11015754)
chr3 (468-561)||(47452300-47452393)
[»] chr6 (5 HSPs)
chr6 (443-514)||(21980012-21980083)
chr6 (185-279)||(21015672-21015766)
chr6 (105-150)||(21979682-21979727)
chr6 (659-725)||(21979564-21979631)
chr6 (173-288)||(21979753-21979868)
[»] chr5 (7 HSPs)
chr5 (195-290)||(29696067-29696162)
chr5 (476-561)||(29687643-29687728)
chr5 (438-557)||(1812021-1812140)
chr5 (473-520)||(42562729-42562776)
chr5 (87-145)||(29696203-29696261)
chr5 (677-725)||(179113-179162)
chr5 (15-60)||(179113-179158)
[»] chr1 (4 HSPs)
chr1 (86-145)||(24310168-24310227)
chr1 (195-281)||(24310047-24310133)
chr1 (473-539)||(24322076-24322142)
chr1 (86-145)||(24367144-24367203)


Alignment Details
Target: chr4 (Bit Score: 594; Significance: 0; HSPs: 51)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 594; E-Value: 0
Query Start/End: Original strand, 16 - 652
Target Start/End: Complemental strand, 50669181 - 50668544
Alignment:
Q  16 caatttgtttccatgtattatctctcactgagaaaaactcaaaatttggtgaaatatcatccatggttggatcataggacaatgaaacaaccaagtaatc 115  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50669181 caatttgtttccatgtattatctctcactgagaaaaactcaaaatttggtgaaatatcatccatggttggatcataggacaatgaaacaaccaagtaatc 50669082  T
Q  116 atctcttgaccggtcataaccaaaaccatatagatgatcaaaatgatattcctttagtttggtatcaaaaggagacaatggtatttgtttatgaaatctg 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  50669081 atctcttgaccggtcataaccaaaaccatatagatgatcaaaatgatattcctttagtttggtatcaaaaggagacaatggtatctgtttatgaaatctg 50668982  T
Q  216 gtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaatatcaggagtaaaataagatcgaggaagtg 315  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50668981 gtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaatatcaggagtaaaataagattgaggaagtg 50668882  T
Q  316 aaaaattaaggttgagtgaagcccaatgattgtt-agcgatgatgactcaaaatctatagatcgaaactcaagaggtgaatgtgatgatatggataaaat 414  Q
    |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50668881 aaaaattaaggttgagtgaagcccaatgattgttaagcgatgatgactcaaaatctatagatcgaaactcaagaggtgaatgtgatgatatggataaaat 50668782  T
Q  415 tctacgagtgtgtgattcggcactaagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgt 514  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50668781 tctacgagtgtgtgattcggcagtaagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgt 50668682  T
Q  515 ataagatatttcacgggcaaccttaccaaaatttgaatgatcaattcgtaatgcagatacgacagtgttgtcttctccatctccatctctgagacaatga 614  Q
    ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||| |||  |||||||| |||||||||||||||||||||    
T  50668681 ataagatatttcacgggcaacctcaccaaaatttgaatgatcaattcgtaatgcagatactacattgtcatcttctccgtctccatctctgagacaatga 50668582  T
Q  615 cgtatggaaaaggggataatagaaaatggtcacaccga 652  Q
    ||||||||||||||||||||||||||||||||||||||    
T  50668581 cgtatggaaaaggggataatagaaaatggtcacaccga 50668544  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 75; E-Value: 4e-34
Query Start/End: Original strand, 84 - 286
Target Start/End: Original strand, 50250804 - 50251006
Alignment:
Q  84 ggatcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccatatagatgatcaaaatgatattcctttagtttggtatcaa 183  Q
    |||| |||||| | |||||| ||||| ||||||||| ||||  |||||||||||||||||||||||||||   ||||||||| ||||| ||||| |||||    
T  50250804 ggatgataggatattgaaaccaccaaataatcatctgttgagtggtcataaccaaaaccatatagatgattggaatgatatttctttaatttggaatcaa 50250903  T
Q  184 aaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctct 283  Q
    || ||||||| ||||||||| | ||||  | ||||||||||||||||| | ||| | | ||| |||| || ||||||||||| |||||||| |||||| |    
T  50250904 aatgagacaaaggtatttgtatgtgaagcccggtggatggattccataggtagaggcttgaaaaacagtggaaaaatataaatcctctacatgaaccttt 50251003  T
Q  284 aat 286  Q
    |||    
T  50251004 aat 50251006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 73; E-Value: 6e-33
Query Start/End: Original strand, 98 - 286
Target Start/End: Original strand, 37827022 - 37827210
Alignment:
Q  98 tgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccatatagatgatcaaaatgatattcctttagtttggtatcaaaaggagacaatggt 197  Q
    |||||||||||||||||||||||| ||| |||||||||||||||||||||||  | | |||| |||||| |  |  ||||  | |||||||||||| |||    
T  37827022 tgaaacaaccaagtaatcatctctagactggtcataaccaaaaccatatagagaaccgaaataatattcttccaaattggagttaaaaggagacaagggt 37827121  T
Q  198 atttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaat 286  Q
    |||||||| |||||||  |||||||||||||||||| |||||||  ||||||  |||||||||| ||| |||||||  |||||| ||||    
T  37827122 atttgtttgtgaaatccagtggatggattccatatgtagatgtttaaagaacggtgcaaaaatacaaaccctctacctgaacctttaat 37827210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 23 - 337
Target Start/End: Complemental strand, 7877847 - 7877534
Alignment:
Q  23 tttccatgtattatctctcactgagaaaaactcaaaatttggtgaaatatcatccatggttggatcataggacaatgaaacaaccaagtaatcatctctt 122  Q
    |||||||||||||||||| | |||||||||||  |||| || ||||| || | | |||||||||| ||||||||||||||| ||||||||||||||||||    
T  7877847 tttccatgtattatctctaaatgagaaaaacttcaaatgtgttgaaa-attaactatggttggattataggacaatgaaaccaccaagtaatcatctctt 7877749  T
Q  123 gaccggtcataaccaaaaccatatagatgatcaaaatgatattcctttagtttggtatcaaaaggagacaatggtatttgtttatgaaatctggtggatg 222  Q
    ||  |||||||||||||||||| || || |     |  |||| |   || ||||| |  |||||||||||  ||||||||||| | |||||  |||||||    
T  7877748 gattggtcataaccaaaaccatgtatatcaatgcgacaatatgctgctaatttggaacgaaaaggagacacaggtatttgttttttaaatccagtggatg 7877649  T
Q  223 gattccatatgcagatg-ttggaagaacaatgcaaaaatataaagcctctacacgaacctctaatatcaggagtaaaataagatcgaggaagtgaaaaat 321  Q
    ||||||||||| ||||| ||||| | ||| | ||||| |||||| ||||| || ||||||||||| |||   | |||||||| || | ||||||||||||    
T  7877648 gattccatatgtagatgattggatg-acagtacaaaagtataaaccctctgcatgaacctctaatttcaaccggaaaataaggtccacgaagtgaaaaat 7877550  T
Q  322 taaggttgagtgaagc 337  Q
    ||| ||| ||||||||    
T  7877549 taatgttcagtgaagc 7877534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 15 - 274
Target Start/End: Complemental strand, 48852793 - 48852534
Alignment:
Q  15 tcaatttgtttccatgtattatctctcactgagaaaaactcaaaatttggtgaaatatcatccatggttggatcataggacaatgaaacaaccaagtaat 114  Q
    ||||||| |||||||| |||| |||||| |||||||||||| |||| || ||||| || | | | ||||| ||||||||||| | |||| ||||||||||    
T  48852793 tcaatttctttccatgcattagctctcaatgagaaaaactctaaatgtgatgaaacattagctaaggttgtatcataggacattaaaactaccaagtaat 48852694  T
Q  115 catctcttgaccggtcataaccaaaaccatatagatgatcaaaatgatattcc-tttagtttggtatcaaaaggagacaatggtatttgtttatgaaatc 213  Q
    ||||  ||||| ||||||| |||||||||||||||| | || ||  || | || | ||   | | |||||  |||||||| ||||||||||| |||| ||    
T  48852693 catcggttgacgggtcatacccaaaaccatatagat-aacagaaatatgtgccatctaacctcgaatcaatgggagacaaaggtatttgtttgtgaactc 48852595  T
Q  214 tggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctaca 274  Q
     |||||||||||||||||   | || |  |||||||  |||||||||||||||||||||||    
T  48852594 cggtggatggattccatagataaatctctgaagaacggtgcaaaaatataaagcctctaca 48852534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 8e-23
Query Start/End: Original strand, 15 - 142
Target Start/End: Complemental strand, 7908446 - 7908325
Alignment:
Q  15 tcaatttgtttccatgtattatctctcactgagaaaaactcaaaatttggtgaaatatcatccatggttggatcataggacaatgaaacaaccaagtaat 114  Q
    ||||||| |||||||||||||||||| |||||||||||||  |||| || |||||    || |  || ||||| ||||||||||||||| ||||||||||    
T  7908446 tcaatttctttccatgtattatctctaactgagaaaaacttcaaatgtgttgaaa----atgc--ggatggattataggacaatgaaaccaccaagtaat 7908353  T
Q  115 catctcttgaccggtcataaccaaaacc 142  Q
    ||||||||||| ||||||||||||||||    
T  7908352 catctcttgactggtcataaccaaaacc 7908325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 182 - 337
Target Start/End: Original strand, 7773938 - 7774093
Alignment:
Q  182 aaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacct 281  Q
    ||||||||||   ||||||||||| | |||||  |||||||||||||||||| ||||||| |    || || ||||| |||||| |||||||||||||||    
T  7773938 aaaaggagacccaggtatttgttttttaaatccagtggatggattccatatgtagatgtttgggtcacgatacaaaagtataaaccctctacacgaacct 7774037  T
Q  282 ctaatatcaggagtaaaataagatcgaggaagtgaaaaattaaggttgagtgaagc 337  Q
    ||||| ||||  | ||||||||||   ||||| |||||||||||||| | ||||||    
T  7774038 ctaatttcagccggaaaataagattctggaagcgaaaaattaaggttcactgaagc 7774093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 48870503 - 48870401
Alignment:
Q  184 aaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctct 283  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||||||||| | ||| | | | || ||||||||| ||||||||||||||||| |||||| |    
T  48870503 aaggacacaaaggtatttgtttgtgaaatccggtggatggattccataggtagagggttggagcacaatgcaataatataaagcctctacatgaaccttt 48870404  T
Q  284 aat 286  Q
    |||    
T  48870403 aat 48870401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 47; E-Value: 2e-17
Query Start/End: Original strand, 184 - 286
Target Start/End: Complemental strand, 48886189 - 48886087
Alignment:
Q  184 aaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctct 283  Q
    ||||| |||| ||||||||||| ||||||| ||||||||||||||||| | ||| | | | || ||||||||| ||||||||||||||||| |||||| |    
T  48886189 aaggacacaaaggtatttgtttgtgaaatccggtggatggattccataggtagagggttggagcacaatgcaataatataaagcctctacatgaaccttt 48886090  T
Q  284 aat 286  Q
    |||    
T  48886089 aat 48886087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 46; E-Value: 8e-17
Query Start/End: Original strand, 468 - 537
Target Start/End: Complemental strand, 7822654 - 7822585
Alignment:
Q  468 gatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacct 537  Q
    |||| ||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  7822654 gatcagagataagagaaaaccatgatttacaaacacacttgaaacgtataagatacttcaccggcaacct 7822585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 473 - 537
Target Start/End: Complemental strand, 7813160 - 7813096
Alignment:
Q  473 gagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacct 537  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  7813160 gagataagagaaaaccatgatttacaaacacacttgaaacgtataagatacttcaccggcaacct 7813096  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 45372427 - 45372543
Alignment:
Q  445 aaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaa 544  Q
    |||||| ||||| |||||||   |||| ||||| | |||||||||||| |||||||| || ||||||||||||||| | ||||| ||||||||||  | |    
T  45372427 aaaatgtgaatttgcaaaatgaggatcagagataatagaaaaccaagacttacaaacacatttgaaacgtataagagacttcaccggcaaccttagtaga 45372526  T
Q  545 atttgaatgatcaattc 561  Q
    |||||||| ||||||||    
T  45372527 atttgaatcatcaattc 45372543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 445 - 561
Target Start/End: Original strand, 48156797 - 48156913
Alignment:
Q  445 aaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaa 544  Q
    |||||||||||| |||||||    ||||||||| |||||||||||||| |||||||||||||||||||||| |||| | ||||| || |||| ||  |      
T  48156797 aaaatgagaatttgcaaaatgagtatcggagataagagaaaaccaagacttacaaacgcacttgaaacgtagaagagacttcaccggtaaccataaaagg 48156896  T
Q  545 atttgaatgatcaattc 561  Q
    |||||||| ||||||||    
T  48156897 atttgaattatcaattc 48156913  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 3e-16
Query Start/End: Original strand, 182 - 286
Target Start/End: Complemental strand, 48875809 - 48875705
Alignment:
Q  182 aaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacct 281  Q
    |||||||||||  ||||||||||| ||||||| ||||||||||||||||| | ||| | | ||| |||||||||| | |||||||||||| || ||||||    
T  48875809 aaaaggagacataggtatttgtttgtgaaatccggtggatggattccataggtagaggcttgaaaaacaatgcaacagtataaagcctctgcaagaacct 48875710  T
Q  282 ctaat 286  Q
     ||||    
T  48875709 ttaat 48875705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 173 - 537
Target Start/End: Complemental strand, 7771379 - 7771020
Alignment:
Q  173 tttggtatcaaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctcta 272  Q
    ||||| |||||| |||||||  ||||||||| | | |||||   ||||||||||||||| |  |||||| | ||  |  | ||||| |||||| ||||||    
T  7771379 tttggaatcaaagggagacaccggtatttgtgttttaaatccaatggatggattccataagtggatgtttggaggtcggtacaaaagtataaaccctcta 7771280  T
Q  273 cacgaacctctaatatcaggagtaaaataagatcgaggaagtgaaaaattaaggttgagtgaagcccaatgattgttagcgatgatgactcaaaatctat 372  Q
    |||||||||||||| |||  || ||||||||||   ||||| |||||||||||||| | ||||||   || || ||||   |  |||  |||||||||||    
T  7771279 cacgaacctctaatttcaacaggaaaataagattctggaagcgaaaaattaaggttcactgaagcaggatcatcgttaagaa--atgcttcaaaatctat 7771182  T
Q  373 agatcgaaactcaagaggtgaatgtgatgatatggataaaattctacgagtgtgtgattcggcactaagttcaaaatgagaattagcaaaattgtgatcg 472  Q
    ||||||||  ||| ||| |   || | ||||||| |||||| ||||| |||||||| | | |    ||||| |||||| |||||  |||| |   ||||     
T  7771181 agatcgaatttcatgagat---tgagttgatatgcataaaaatctacaagtgtgtgttgcagaggcaagttgaaaatgtgaattttcaaagtgaggatca 7771085  T
Q  473 gagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacct 537  Q
    ||||| |||||||||||||| ||||||||||| ||||||| ||||||| | ||||| ||||||||    
T  7771084 gagataagagaaaaccaagacttacaaacgcatttgaaacatataagagacttcaccggcaacct 7771020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 479 - 537
Target Start/End: Complemental strand, 7800311 - 7800253
Alignment:
Q  479 agagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacct 537  Q
    ||||||||||| ||||||||||| |||||||||||||||||||| ||||| ||||||||    
T  7800311 agagaaaaccatgatttacaaacacacttgaaacgtataagatacttcaccggcaacct 7800253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 173 - 574
Target Start/End: Complemental strand, 7790064 - 7789668
Alignment:
Q  173 tttggtatcaaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctcta 272  Q
    ||||| |||||| |||||||  ||||||||| | | |||||  |||||||||||||||| |  |||||| | ||  |  | ||||| |||||| ||||||    
T  7790064 tttggaatcaaagggagacaccggtatttgtgttttaaatccagtggatggattccataagtggatgtttggaggtcggtacaaaagtataaaccctcta 7789965  T
Q  273 cacgaacctctaatatcaggagtaaaataagatcgaggaagtgaaaaattaaggttgagtgaagcccaatgattgttagcgatgatgactcaaaatctat 372  Q
    |||||||||||||| | |  || ||||||||||   ||||| |||||||||||||| | ||||||   || || ||||   |  |||  |||||||||||    
T  7789964 cacgaacctctaatttaaacaggaaaataagattctggaagcgaaaaattaaggttcactgaagcaggatcatcgttaagaa--atgcttcaaaatctat 7789867  T
Q  373 agatcgaaactcaagaggtgaatgtgatgatatggataaaattctacgagtgtgtgattcggcactaagttcaaaatgagaattagcaaaattgtgatcg 472  Q
    ||||| ||  ||| ||| |   || | ||||||  |||||| ||||| |||||||| | |||    ||||| |||||| |||||  |||| |   |||||    
T  7789866 agatcaaatttcatgagat---tgagttgatatacataaaaatctacaagtgtgtgttgcggaggcaagttgaaaatgtgaattttcaaagtgaggatcg 7789770  T
Q  473 gagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattcgtaatgcagat 572  Q
    ||||| | |||||||||||| ||||||||||| ||||||| ||||||| | ||||| |||||||| | || |||||| || |||| ||| | | ||||||    
T  7789769 gagataaaagaaaaccaagacttacaaacgcatttgaaacatataagagacttcaccggcaacctcatcagaatttggattatcagttcatgaggcagat 7789670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 416 - 572
Target Start/End: Complemental strand, 48870279 - 48870123
Alignment:
Q  416 ctacgagtgtgtgattcggcactaagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgta 515  Q
    ||||||||||||| | ||||  | || | |||||| ||||| ||||||  | |||||||||| ||| |||||||||| ||||||||||| |||||||| |    
T  48870279 ctacgagtgtgtgttgcggctgtgagatgaaaatgtgaatttgcaaaaaggggatcggagataagaaaaaaccaagacttacaaacgcatttgaaacgaa 48870180  T
Q  516 taagatatttcacgggcaaccttaccaaaatttgaatgatcaattcgtaatgcagat 572  Q
    ||||| | ||||| || | ||| | || ||||||||  |||||||| | ||||||||    
T  48870179 taagagaattcaccggtagcctcagcagaatttgaactatcaattcatgatgcagat 48870123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 416 - 572
Target Start/End: Complemental strand, 48885965 - 48885809
Alignment:
Q  416 ctacgagtgtgtgattcggcactaagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgta 515  Q
    ||||||||||||| | ||||  | || | |||||| ||||| ||||||  | |||||||||| ||| |||||||||| ||||||||||| |||||||| |    
T  48885965 ctacgagtgtgtgttgcggctgtgagatgaaaatgtgaatttgcaaaaaggggatcggagataagaaaaaaccaagacttacaaacgcatttgaaacgaa 48885866  T
Q  516 taagatatttcacgggcaaccttaccaaaatttgaatgatcaattcgtaatgcagat 572  Q
    ||||| | ||||| || | ||| | || ||||||||  |||||||| | ||||||||    
T  48885865 taagagaattcaccggtagcctcagcagaatttgaactatcaattcatgatgcagat 48885809  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 41; E-Value: 0.00000000000007
Query Start/End: Original strand, 438 - 534
Target Start/End: Original strand, 49041501 - 49041597
Alignment:
Q  438 taagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaa 534  Q
    |||||| |||||||||||| ||||||| | |||| ||||| |||||||||||||| || |||||||| |||||||  |||||| | ||||| |||||    
T  49041501 taagttaaaaatgagaatttgcaaaatggggatcagagataagagaaaaccaagacttgcaaacgcatttgaaacaaataagagacttcactggcaa 49041597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 180 - 279
Target Start/End: Original strand, 48170690 - 48170789
Alignment:
Q  180 tcaaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaac 279  Q
    |||| ||||||||| |||||||||||||||| || ||||||||||||||||| | |||   | |||  |  |||||||||||||||||||||||| ||||    
T  48170690 tcaataggagacaaaggtatttgtttatgaactcgggtggatggattccataggtagaaacttgaattatgatgcaaaaatataaagcctctacaggaac 48170789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 473 - 539
Target Start/End: Original strand, 45366619 - 45366685
Alignment:
Q  473 gagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacctta 539  Q
    ||||| |||||||||||| | ||||||||||||||||||||||||||| | ||||| || |||||||    
T  45366619 gagataagagaaaaccaatacttacaaacgcacttgaaacgtataagagacttcactggtaacctta 45366685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 80 - 150
Target Start/End: Original strand, 48170581 - 48170651
Alignment:
Q  80 ggttggatcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccatatagat 150  Q
    |||||||||| |||||| |||||| || ||||||||||||||| || | ||||| ||||||||||||||||    
T  48170581 ggttggatcacaggacactgaaaccactaagtaatcatctcttaactgatcatacccaaaaccatatagat 48170651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 438 - 520
Target Start/End: Complemental strand, 48891124 - 48891042
Alignment:
Q  438 taagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataaga 520  Q
    |||||| |||||| ||||| |||||||   |||| ||||  |||||||||||||| ||||||||||| |||||||||||||||    
T  48891124 taagttgaaaatgcgaatttgcaaaatgaggatctgagacaagagaaaaccaagacttacaaacgcatttgaaacgtataaga 48891042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 468 - 574
Target Start/End: Original strand, 50251201 - 50251307
Alignment:
Q  468 gatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattcgtaatg 567  Q
    |||| ||||| |||||||||||||| ||| |||| ||||| ||  ||||||||   ||||| |||||||| || ||||||||| |||||||||||| | |    
T  50251201 gatcagagataagagaaaaccaagacttagaaacccactttaattgtataagagccttcactggcaacctaactaaaatttgagtgatcaattcgtgagg 50251300  T
Q  568 cagatac 574  Q
    |||||||    
T  50251301 cagatac 50251307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 7813509 - 7813464
Alignment:
Q  110 gtaatcatctcttgaccggtcataaccaaaaccatatagatgatca 155  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||    
T  7813509 gtaatcatctcttgactggtcataaccaaaaccatatagattatca 7813464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 110 - 155
Target Start/End: Complemental strand, 7822998 - 7822953
Alignment:
Q  110 gtaatcatctcttgaccggtcataaccaaaaccatatagatgatca 155  Q
    |||||||||||||||| |||||||||||||||||||||||| ||||    
T  7822998 gtaatcatctcttgactggtcataaccaaaaccatatagattatca 7822953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Original strand, 7237767 - 7237806
Alignment:
Q  105 accaagtaatcatctcttgaccggtcataaccaaaaccat 144  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7237767 accaagtaatcatctcttgactggtcataaccaaaaccat 7237806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 7771435 - 7771396
Alignment:
Q  105 accaagtaatcatctcttgaccggtcataaccaaaaccat 144  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7771435 accaagtaatcatctcttgactggtcataaccaaaaccat 7771396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 105 - 144
Target Start/End: Complemental strand, 7790120 - 7790081
Alignment:
Q  105 accaagtaatcatctcttgaccggtcataaccaaaaccat 144  Q
    ||||||||||||||||||||| ||||||||||||||||||    
T  7790120 accaagtaatcatctcttgactggtcataaccaaaaccat 7790081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 438 - 520
Target Start/End: Complemental strand, 47207649 - 47207567
Alignment:
Q  438 taagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataaga 520  Q
    ||||||||||||| ||||||| |||||   | ||||||||||||||||| ||||| || ||||| | ||| ||||||||||||    
T  47207649 taagttcaaaatgtgaattagaaaaatgtgggtcggagatgagagaaaatcaagacttccaaacactcttaaaacgtataaga 47207567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 473 - 582
Target Start/End: Original strand, 7238118 - 7238227
Alignment:
Q  473 gagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattcgtaatgcagat 572  Q
    ||||| |||||||||||||| |||||||| || |||||||  |||||| | ||||| |||||||| | || |||||| ||||| | ||| | | ||||||    
T  7238118 gagataagagaaaaccaagacttacaaacacatttgaaacagataagagacttcactggcaacctcatcagaatttggatgattagttcatgaggcagat 7238217  T
Q  573 acgacagtgt 582  Q
    || |||||||    
T  7238218 acaacagtgt 7238227  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 468 - 561
Target Start/End: Complemental strand, 7904717 - 7904624
Alignment:
Q  468 gatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattc 561  Q
    |||| ||||| |||||||||||  | |||||||| || ||||||||||||||| | ||||| |||||||  | ||| |||||||| ||||||||    
T  7904717 gatcagagataagagaaaaccataacttacaaacacatttgaaacgtataagagacttcacaggcaaccacatcaagatttgaataatcaattc 7904624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 88 - 145
Target Start/End: Original strand, 48147744 - 48147801
Alignment:
Q  88 cataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccata 145  Q
    ||||||| |||||||| ||||||||||||||| || || ||||||| |||||||||||    
T  48147744 cataggagaatgaaaccaccaagtaatcatctgttaactggtcatacccaaaaccata 48147801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 83 - 144
Target Start/End: Original strand, 48705381 - 48705442
Alignment:
Q  83 tggatcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccat 144  Q
    |||||||  ||||| |||||||||||||||||||||| ||||| | ||||| ||||||||||    
T  48705381 tggatcaacggacattgaaacaaccaagtaatcatctgttgactgatcatatccaaaaccat 48705442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 440 - 513
Target Start/End: Complemental strand, 48875559 - 48875486
Alignment:
Q  440 agttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacg 513  Q
    |||| |||||| ||||| | ||||| | | ||||||||||||||||||||||| || |||||||| ||||||||    
T  48875559 agttgaaaatgtgaatttgtaaaatggggttcggagatgagagaaaaccaagacttgcaaacgcatttgaaacg 48875486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 241
Target Start/End: Original strand, 7237823 - 7237891
Alignment:
Q  173 tttggtatcaaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgtt 241  Q
    ||||| ||||||||||||||  ||||||||||| | |||||  |||||||||||||||| | |||||||    
T  7237823 tttggaatcaaaaggagacacgggtatttgttttttaaatccagtggatggattccatacgtagatgtt 7237891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 440 - 520
Target Start/End: Complemental strand, 7877433 - 7877353
Alignment:
Q  440 agttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataaga 520  Q
    |||| |||||| ||||| ||||||||| |||| ||||| |||||||||||    ||||||| ||| |||||||||||||||    
T  7877433 agttgaaaatgtgaatttgcaaaattgggatcagagataagagaaaaccatagcttacaaatgcatttgaaacgtataaga 7877353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 173 - 337
Target Start/End: Complemental strand, 7908306 - 7908142
Alignment:
Q  173 tttggtatcaaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctcta 272  Q
    ||||| ||||| ||||||||   |||| ||||| | |||||  || ||||||||||||||| ||||||  | || ||  | ||||| |||||| ||||||    
T  7908306 tttggaatcaacaggagacaggtgtatatgttttttaaatccagtagatggattccatatgtagatgtctggaggacggtacaaaagtataaaccctcta 7908207  T
Q  273 cacgaacctctaatatcaggagtaaaataagatcgaggaagtgaaaaattaaggttgagtgaagc 337  Q
    || ||||||||||| |||   | ||||| |||||| | ||| |||||| ||| ||||||||||||    
T  7908206 catgaacctctaatttcaaccggaaaatgagatcgggtaagcgaaaaagtaatgttgagtgaagc 7908142  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 473 - 561
Target Start/End: Complemental strand, 48862921 - 48862833
Alignment:
Q  473 gagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattc 561  Q
    ||||| |||||||||||||| || |||||||| |||||||| |||||| | ||||| || ||||||| ||  ||| | |||||||||||    
T  48862921 gagataagagaaaaccaagacttgcaaacgcatttgaaacgaataagagacttcaccggtaaccttagcaggattaggatgatcaattc 48862833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 89 - 144
Target Start/End: Original strand, 7773845 - 7773900
Alignment:
Q  89 ataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccat 144  Q
    ||||||||||  ||| ||||||||||||||||||  | ||||||||||||||||||    
T  7773845 ataggacaatacaaccaccaagtaatcatctcttacctggtcataaccaaaaccat 7773900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 537
Target Start/End: Complemental strand, 7908040 - 7907941
Alignment:
Q  438 taagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacct 537  Q
    |||||| |||||| ||||| ||||||| | || | ||||| ||||||||||| || |||| |||  ||||||||||| ||||| | ||||| ||||||||    
T  7908040 taagttgaaaatgtgaatttgcaaaatggggagcagagataagagaaaaccatgacttacgaacagacttgaaacgtgtaagagacttcaccggcaacct 7907941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 469 - 516
Target Start/End: Original strand, 45385181 - 45385228
Alignment:
Q  469 atcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtat 516  Q
    |||||||| ||||||||||||||| ||||||||| | |||||||||||    
T  45385181 atcggagacgagagaaaaccaagacttacaaacggatttgaaacgtat 45385228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 58
Target Start/End: Original strand, 48705331 - 48705374
Alignment:
Q  15 tcaatttgtttccatgtattatctctcactgagaaaaactcaaa 58  Q
    ||||||| ||||||||||||| |||||| |||||||||||||||    
T  48705331 tcaatttctttccatgtattaactctcaatgagaaaaactcaaa 48705374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 479 - 594
Target Start/End: Complemental strand, 48902624 - 48902509
Alignment:
Q  479 agagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattcgtaatgcagatacgaca 578  Q
    |||||||||||||| |||||||| || |||||||| || ||| | || || |||||||    ||||||||| ||||||||||| | | | ||||||| ||    
T  48902624 agagaaaaccaagacttacaaacacatttgaaacgaatgagagactttaccggcaaccactgcaaaatttggatgatcaattcatgaggtagatacggca 48902525  T
Q  579 gtgttgtcttctccat 594  Q
    ||||  ||||||||||    
T  48902524 gtgtcttcttctccat 48902509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 184 - 231
Target Start/End: Original strand, 49044310 - 49044357
Alignment:
Q  184 aaggagacaatggtatttgtttatgaaatctggtggatggattccata 231  Q
    |||||||||| ||||||||||| |||| ||| ||||||||||||||||    
T  49044310 aaggagacaaaggtatttgtttgtgaactctagtggatggattccata 49044357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 659 - 732
Target Start/End: Original strand, 49048505 - 49048579
Alignment:
Q  659 catataagggaagccagcaccctcaatttgtttccatgt-ttatctctgaatgagaaaaactccaaatatgatga 732  Q
    ||||||||||| |  || ||||||||||| ||||||| | |||||||| || |||||||||||||||| ||||||    
T  49048505 catataagggatgtgagtaccctcaatttctttccatatattatctctcaacgagaaaaactccaaatgtgatga 49048579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 458 - 512
Target Start/End: Complemental strand, 50672215 - 50672161
Alignment:
Q  458 gcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaac 512  Q
    |||||||||||||| ||||||||||||| ||| || ||| |||| ||||||||||    
T  50672215 gcaaaattgtgatcagagatgagagaaagccatgacttagaaacacacttgaaac 50672161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 114 - 147
Target Start/End: Complemental strand, 7800662 - 7800629
Alignment:
Q  114 tcatctcttgaccggtcataaccaaaaccatata 147  Q
    |||||||||||| |||||||||||||||||||||    
T  7800662 tcatctcttgactggtcataaccaaaaccatata 7800629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 186 - 231
Target Start/End: Original strand, 33133930 - 33133975
Alignment:
Q  186 ggagacaatggtatttgtttatgaaatctggtggatggattccata 231  Q
    |||||||| |||||||||||||||| || |||| ||||||||||||    
T  33133930 ggagacaaaggtatttgtttatgaactcgggtgaatggattccata 33133975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 472 - 537
Target Start/End: Original strand, 48735712 - 48735777
Alignment:
Q  472 ggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacct 537  Q
    |||||| |||||||||||||| |||||||| || |||||||| |||||| | ||||| || |||||    
T  48735712 ggagataagagaaaaccaagacttacaaacacatttgaaacgaataagagacttcaccggtaacct 48735777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 96; Significance: 1e-46; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 96; E-Value: 1e-46
Query Start/End: Original strand, 87 - 286
Target Start/End: Complemental strand, 48883856 - 48883657
Alignment:
Q  87 tcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccatatagatgatcaaaatgatattcctttagtttggtatcaaaag 186  Q
    |||||||||| |||||| |||| |||||||||||||||| |||||||||||||||||||||||||||| |||| || | | | |    ||| || |||||    
T  48883856 tcataggacattgaaaccaccatgtaatcatctcttgacgggtcataaccaaaaccatatagatgatcgaaataatgtacttctgaaatggaataaaaag 48883757  T
Q  187 gagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaat 286  Q
    ||||||| ||||||||||| |||||||  ||| |||||||||||||||||||||||||||||| ||||||||| | ||| ||||||||||||||| ||||    
T  48883756 gagacaaaggtatttgtttgtgaaatccagtgtatggattccatatgcagatgttggaagaaccatgcaaaaacagaaaccctctacacgaacctttaat 48883657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 59; Significance: 1e-24; HSPs: 10)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 92 - 286
Target Start/End: Complemental strand, 12200357 - 12200163
Alignment:
Q  92 ggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccatatagatgatcaaaatgatattcctttagtttggtatcaaaaggagac 191  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    ||| ||| | | ||  ||   |||||||||||||    
T  12200357 ggacaataaaaccaccaagtaatcatctcttgaccggtcataaccaaaaccatatagatgatgtcgatggtatgcatgtaacttcaaatcaaaaggagac 12200258  T
Q  192 aatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaat 286  Q
    || ||||||| ||| ||||| || | |||||||||||||| | |||| || |   |||| ||||| |||||||| ||||| || |||||| ||||    
T  12200257 aaaggtatttttttgtgaaacctagaggatggattccatacgtagatatttgtccaacagtgcaagaatataaaccctctgcatgaacctttaat 12200163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 92 - 286
Target Start/End: Complemental strand, 12444785 - 12444591
Alignment:
Q  92 ggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccatatagatgatcaaaatgatattcctttagtttggtatcaaaaggagac 191  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||||||    ||| ||| | | ||  ||   |||||||||||||    
T  12444785 ggacaataaaaccaccaagtaatcatctcttgaccggtcataaccaaaaccatatagatgatgtcgatggtatgcatgtaacttcaaatcaaaaggagac 12444686  T
Q  192 aatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaat 286  Q
    || ||||||| ||| ||||| || | |||||||||||||| | |||| || |   |||| ||||| |||||||| ||||| || |||||| ||||    
T  12444685 aaaggtatttttttgtgaaacctagaggatggattccatacgtagatatttgtccaacagtgcaagaatataaaccctctgcatgaacctttaat 12444591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 44; E-Value: 0.000000000000001
Query Start/End: Original strand, 410 - 537
Target Start/End: Complemental strand, 15348605 - 15348478
Alignment:
Q  410 aaaattctacgagtgtgtgattcggcactaagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttga 509  Q
    ||||||||||||||||||| | ||||  ||| || |||||| ||||| || || |   |||| ||||| |||||||||||||| ||||||||||| ||||    
T  15348605 aaaattctacgagtgtgtgttgcggcggtaatttgaaaatgtgaatttgcgaagtaaggatcagagataagagaaaaccaagacttacaaacgcatttga 15348506  T
Q  510 aacgtataagatatttcacgggcaacct 537  Q
    ||||||||||| | ||||| || |||||    
T  15348505 aacgtataagagacttcaccggtaacct 15348478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 12195362 - 12195300
Alignment:
Q  80 ggttggatcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaacc 142  Q
    ||||||||||||||||||| |||| |||||||||||||||||| | | |||||||||||||||    
T  12195362 ggttggatcataggacaataaaacgaccaagtaatcatctcttaatccgtcataaccaaaacc 12195300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000005
Query Start/End: Original strand, 80 - 142
Target Start/End: Complemental strand, 12439790 - 12439728
Alignment:
Q  80 ggttggatcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaacc 142  Q
    ||||||||||||||||||| |||| |||||||||||||||||| | | |||||||||||||||    
T  12439790 ggttggatcataggacaataaaacgaccaagtaatcatctcttaatccgtcataaccaaaacc 12439728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 12195261 - 12195156
Alignment:
Q  181 caaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacc 280  Q
    ||||||||||||||  ||||| ||| |||||||| | |||||||||||||| | ||| ||| |   |||||| ||| |||||||| ||||| ||||||||    
T  12195261 caaaaggagacaattttatttctttgtgaaatctagaggatggattccatacgtagaggtttgtcaaacaattcaataatataaaccctctgcacgaacc 12195162  T
Q  281 tctaat 286  Q
    | ||||    
T  12195161 tttaat 12195156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 34; E-Value: 0.000000001
Query Start/End: Original strand, 181 - 286
Target Start/End: Complemental strand, 12439689 - 12439584
Alignment:
Q  181 caaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacc 280  Q
    ||||||||||||||  ||||| ||| |||||||| | |||||||||||||| | ||| ||| |   |||||| ||| |||||||| ||||| ||||||||    
T  12439689 caaaaggagacaattttatttctttgtgaaatctagaggatggattccatacgtagaggtttgtcaaacaattcaataatataaaccctctgcacgaacc 12439590  T
Q  281 tctaat 286  Q
    | ||||    
T  12439589 tttaat 12439584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 485 - 520
Target Start/End: Original strand, 4032326 - 4032361
Alignment:
Q  485 aaccaagatttacaaacgcacttgaaacgtataaga 520  Q
    ||||||||||||||||| ||||||||||||||||||    
T  4032326 aaccaagatttacaaacacacttgaaacgtataaga 4032361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 561
Target Start/End: Complemental strand, 12199992 - 12199899
Alignment:
Q  468 gatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattc 561  Q
    |||| ||||| ||||||||||| || |||||||| || ||||||| || |||| | ||||| |||||||| | ||  ||||||||||| |||||    
T  12199992 gatcagagataagagaaaaccatgacttacaaacacatttgaaacataaaagagacttcaccggcaacctcagcaggatttgaatgattaattc 12199899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 561
Target Start/End: Complemental strand, 12444420 - 12444327
Alignment:
Q  468 gatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattc 561  Q
    |||| ||||| ||||||||||| || |||||||| || ||||||| || |||| | ||||| |||||||| | ||  ||||||||||| |||||    
T  12444420 gatcagagataagagaaaaccatgacttacaaacacatttgaaacataaaagagacttcaccggcaacctcagcaggatttgaatgattaattc 12444327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 48; Significance: 5e-18; HSPs: 8)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 5e-18
Query Start/End: Original strand, 181 - 328
Target Start/End: Original strand, 47452018 - 47452165
Alignment:
Q  181 caaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacc 280  Q
    ||||||||| ||| ||||||||||| |||| ||  |||||||||||||||||| ||||||| |||||||||   |||| |||||| |||||||| |||||    
T  47452018 caaaaggaggcaaaggtatttgtttgtgaactccagtggatggattccatatgtagatgtttgaagaacaacttaaaagtataaaccctctacatgaacc 47452117  T
Q  281 tctaatatcaggagtaaaataagatcgaggaagtgaaaaattaaggtt 328  Q
    | |||| ||| || || | | |||| | |||||  |||||||||||||    
T  47452118 tttaatttcaagattatactcagattggggaagcaaaaaattaaggtt 47452165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 11005978 - 11006041
Alignment:
Q  86 atcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccatataga 149  Q
    ||||||||||| ||| || ||||||||||||||||||||  ||||||| |||||||||||||||    
T  11005978 atcataggacactgataccaccaagtaatcatctcttgaatggtcatacccaaaaccatataga 11006041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 86 - 149
Target Start/End: Original strand, 11024553 - 11024616
Alignment:
Q  86 atcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccatataga 149  Q
    ||||||||||| ||| || ||||||||||||||||||||  ||||||| |||||||||||||||    
T  11024553 atcataggacactgataccaccaagtaatcatctcttgaatggtcatacccaaaaccatataga 11024616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 468 - 574
Target Start/End: Original strand, 11006355 - 11006461
Alignment:
Q  468 gatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattcgtaatg 567  Q
    |||| ||||| ||||  ||||| || |||||||| |||||||||||||||||  | ||||| |||||||| | ||| ||||| ||||||||||| | | |    
T  11006355 gatcagagataagagttaaccatgacttacaaacacacttgaaacgtataagtgacttcaccggcaacctcaacaagatttgtatgatcaattcatgagg 11006454  T
Q  568 cagatac 574  Q
    |||||||    
T  11006455 cagatac 11006461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 439 - 561
Target Start/End: Original strand, 11024901 - 11025023
Alignment:
Q  439 aagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacctt 538  Q
    |||||||||||| || || ||||| || ||||| ||||| ||||  ||||| || ||||||||||| ||||||||||| ||| | ||||| || |||||     
T  11024901 aagttcaaaatgcgattttgcaaagttatgatcagagataagagctaaccatgacttacaaacgcatttgaaacgtatgagagacttcaccggtaacctc 11025000  T
Q  539 accaaaatttgaatgatcaattc 561  Q
    | ||  ||||| |||||||||||    
T  11025001 aacatgatttgtatgatcaattc 11025023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 33; E-Value: 0.000000004
Query Start/End: Original strand, 212 - 336
Target Start/End: Original strand, 11024673 - 11024797
Alignment:
Q  212 tctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaatatcaggagtaaaataagatcgagga 311  Q
    |||||| |||||||||||||   | |||||||||||||||  ||||| |||||| |||||||| |||| | |||| ||| || || ||||||||   |||    
T  11024673 tctggtcgatggattccatagataaatgttggaagaacaagtcaaaactataaatcctctacaagaacttttaatttcaagattagaataagattcggga 11024772  T
Q  312 agtgaaaaattaaggttgagtgaag 336  Q
    ||   |||||||||||| |||||||    
T  11024773 agcataaaattaaggttaagtgaag 11024797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 195 - 305
Target Start/End: Original strand, 11015644 - 11015754
Alignment:
Q  195 ggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaatatcaggag 294  Q
    ||||||||||| |||  ||  || ||||||||||||| | ||||||| |||||||||  ||||| |||||| |||||||| |||| | |||| ||| ||     
T  11015644 ggtatttgtttgtgatgtccagttgatggattccataggtagatgtttgaagaacaagtcaaaactataaatcctctacatgaacttttaatttcaagac 11015743  T
Q  295 taaaataagat 305  Q
    || ||||||||    
T  11015744 tagaataagat 11015754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 468 - 561
Target Start/End: Original strand, 47452300 - 47452393
Alignment:
Q  468 gatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattc 561  Q
    |||| ||||| ||||||||||| || ||| ||| ||||||||| |||| |||| | ||||| |||||||| ||||| || || || ||||||||    
T  47452300 gatcagagataagagaaaaccatgacttagaaatgcacttgaagcgtacaagagacttcaccggcaacctcaccaagatctggattatcaattc 47452393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 443 - 514
Target Start/End: Original strand, 21980012 - 21980083
Alignment:
Q  443 tcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgt 514  Q
    |||||||| ||||| ||||| ||| |||  |||||||||||||||||||| |||||||| ||||||||||||    
T  21980012 tcaaaatgtgaattcgcaaagttgggatgagagatgagagaaaaccaagacttacaaacacacttgaaacgt 21980083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 39; E-Value: 0.000000000001
Query Start/End: Original strand, 185 - 279
Target Start/End: Complemental strand, 21015766 - 21015672
Alignment:
Q  185 aggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaac 279  Q
    ||||||||| ||||||||||| |||| ||| |||||||||||||||| | ||||||| |||  |   |||||||||||||| |||||||| ||||    
T  21015766 aggagacaaaggtatttgtttgtgaactctagtggatggattccataggtagatgtttgaatcatggtgcaaaaatataaaccctctacatgaac 21015672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 105 - 150
Target Start/End: Original strand, 21979682 - 21979727
Alignment:
Q  105 accaagtaatcatctcttgaccggtcataaccaaaaccatatagat 150  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  21979682 accaagtaatcatttcttgactggtcataaccaaaaccatatagat 21979727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 659 - 725
Target Start/End: Original strand, 21979564 - 21979631
Alignment:
Q  659 catataagggaagccagcaccctcaatttgtttccatgt-ttatctctgaatgagaaaaactccaaat 725  Q
    ||||||||||||   ||||||||||||||||||||| || |||||||| || ||||||| ||||||||    
T  21979564 catataagggaaatgagcaccctcaatttgtttccaggtattatctctcaaagagaaaacctccaaat 21979631  T

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Target: chr6; HSP #5
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 173 - 288
Target Start/End: Original strand, 21979753 - 21979868
Alignment:
Q  173 tttggtatcaaaaggagacaatggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctcta 272  Q
    ||||| ||||| ||||||||| ||||||||||| |||| ||  || || || ||||||||| |||   | ||| |||| || ||||||||||| ||||||    
T  21979753 tttggaatcaagaggagacaaaggtatttgtttttgaagtccagtagacgggttccatatgtagagtcttgaaaaacagtggaaaaatataaatcctcta 21979852  T
Q  273 cacgaacctctaatat 288  Q
    || |||||| ||||||    
T  21979853 catgaacctttaatat 21979868  T

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Target: chr5 (Bit Score: 40; Significance: 0.0000000000003; HSPs: 7)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 40; E-Value: 0.0000000000003
Query Start/End: Original strand, 195 - 290
Target Start/End: Complemental strand, 29696162 - 29696067
Alignment:
Q  195 ggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacctctaatatca 290  Q
    |||||| |||| ||||||| |||||||||||||||||| |||| | | ||  |||| | ||||| |||||||||||||||||||||| ||| ||||    
T  29696162 ggtattcgtttgtgaaatccggtggatggattccatatacagaggcttgagtaacagttcaaaagtataaagcctctacacgaacctttaaaatca 29696067  T

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Target: chr5; HSP #2
Raw Score: 38; E-Value: 0.000000000004
Query Start/End: Original strand, 476 - 561
Target Start/End: Complemental strand, 29687728 - 29687643
Alignment:
Q  476 atgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaaccttaccaaaatttgaatgatcaattc 561  Q
    ||||||||||||||||| |||||||| |||||||| ||||||||| | ||||| || ||| |||  |  |||||||||||||||||    
T  29687728 atgagagaaaaccaagacttacaaacacacttgaagcgtataagagacttcactggtaactttagaaggatttgaatgatcaattc 29687643  T

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Target: chr5; HSP #3
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 438 - 557
Target Start/End: Complemental strand, 1812140 - 1812021
Alignment:
Q  438 taagttcaaaatgagaattagcaaaattgtgatcggagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacct 537  Q
    |||||| ||||||| |||| ||||| | | |||  ||||| |||||||||||  | |||||||| || ||| ||||||| ||||| ||||| || |||||    
T  1812140 taagttgaaaatgataatttgcaaagtggggatttgagataagagaaaaccataacttacaaacccatttggaacgtatgagatacttcactggtaacct 1812041  T
Q  538 taccaaaatttgaatgatca 557  Q
     | ||||||||||| |||||    
T  1812040 caacaaaatttgaacgatca 1812021  T

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Target: chr5; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 473 - 520
Target Start/End: Original strand, 42562729 - 42562776
Alignment:
Q  473 gagatgagagaaaaccaagatttacaaacgcacttgaaacgtataaga 520  Q
    ||||| |||||||||||||| ||||||||||| |||||||| ||||||    
T  42562729 gagattagagaaaaccaagacttacaaacgcatttgaaacgaataaga 42562776  T

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Target: chr5; HSP #5
Raw Score: 31; E-Value: 0.00000007
Query Start/End: Original strand, 87 - 145
Target Start/End: Complemental strand, 29696261 - 29696203
Alignment:
Q  87 tcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccata 145  Q
    |||||||||| |||||  ||||||||||||||| |||||  |||||| |||||||||||    
T  29696261 tcataggacattgaaatcaccaagtaatcatctgttgactcgtcatacccaaaaccata 29696203  T

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Target: chr5; HSP #6
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 677 - 725
Target Start/End: Complemental strand, 179162 - 179113
Alignment:
Q  677 accctcaatttgtttccatgt-ttatctctgaatgagaaaaactccaaat 725  Q
    ||||||||||| ||||||||| |||||||| |||||||||| ||||||||    
T  179162 accctcaatttctttccatgtattatctctcaatgagaaaatctccaaat 179113  T

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Target: chr5; HSP #7
Raw Score: 30; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 60
Target Start/End: Complemental strand, 179158 - 179113
Alignment:
Q  15 tcaatttgtttccatgtattatctctcactgagaaaaactcaaaat 60  Q
    ||||||| |||||||||||||||||||| |||||||| ||| ||||    
T  179158 tcaatttctttccatgtattatctctcaatgagaaaatctccaaat 179113  T

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Target: chr1 (Bit Score: 36; Significance: 0.00000000007; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 36; E-Value: 0.00000000007
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 24310227 - 24310168
Alignment:
Q  86 atcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccata 145  Q
    ||||||||| | | |||| |||||||||||||||||||||  ||||||||||||||||||    
T  24310227 atcataggatactaaaactaccaagtaatcatctcttgactcgtcataaccaaaaccata 24310168  T

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Target: chr1; HSP #2
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 24310133 - 24310047
Alignment:
Q  195 ggtatttgtttatgaaatctggtggatggattccatatgcagatgttggaagaacaatgcaaaaatataaagcctctacacgaacct 281  Q
    ||||||||| |||||| || ||||||||||||||||| | | ||||| ||| |||| | ||| |||||||| |||||||| ||||||    
T  24310133 ggtatttgtctatgaactccggtggatggattccatacgtaaatgtttgaaaaacactccaacaatataaaacctctacatgaacct 24310047  T

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Target: chr1; HSP #3
Raw Score: 35; E-Value: 0.0000000003
Query Start/End: Original strand, 473 - 539
Target Start/End: Complemental strand, 24322142 - 24322076
Alignment:
Q  473 gagatgagagaaaaccaagatttacaaacgcacttgaaacgtataagatatttcacgggcaacctta 539  Q
    ||||| |||||||||||||| ||||||||||| |||||||| |||||| | |||||  |||||||||    
T  24322142 gagataagagaaaaccaagacttacaaacgcatttgaaacgaataagagacttcaccagcaacctta 24322076  T

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Target: chr1; HSP #4
Raw Score: 32; E-Value: 0.00000002
Query Start/End: Original strand, 86 - 145
Target Start/End: Complemental strand, 24367203 - 24367144
Alignment:
Q  86 atcataggacaatgaaacaaccaagtaatcatctcttgaccggtcataaccaaaaccata 145  Q
    ||||||||| || ||||| ||||||||||||||| |||||  |||||| |||||||||||    
T  24367203 atcataggataacgaaaccaccaagtaatcatctgttgacttgtcatacccaaaaccata 24367144  T

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