View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

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 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4051_high_22 (Length: 297)

Name: NF4051_high_22
Description: NF4051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4051_high_22
NF4051_high_22
[»] chr7 (1 HSPs)
chr7 (14-297)||(39938156-39938439)


Alignment Details
Target: chr7 (Bit Score: 284; Significance: 1e-159; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 284; E-Value: 1e-159
Query Start/End: Original strand, 14 - 297
Target Start/End: Complemental strand, 39938439 - 39938156
Alignment:
Q  14 atcataacctaacaactgcctaaaacattatactgagacagattcacaggtcattgatgaataaaacagctataaactattttcatgatataagtatcta 113  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938439 atcataacctaacaactgcctaaaacattatactgagacagattcacaggtcattgatgaataaaacagctataaactattttcatgatataagtatcta 39938340  T
Q  114 acattattttgtaaaaacaagtatacaacattacatttacatacatataatcgattgacactttatcctatgataagtgtacccattttattttgtaaac 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938339 acattattttgtaaaaacaagtatacaacattacatttacatacatataatcgattgacactttatcctatgataagtgtacccattttattttgtaaac 39938240  T
Q  214 agaataatgtaaatgagggaagagaaaaaactaagttacaacagtttacatgttagcagtgtagtatagattagcttgcaactg 297  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  39938239 agaataatgtaaatgagggaagagaaaaaactaagttacaacagtttacatgttagcagtgtagtatagattagcttgcaactg 39938156  T

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