View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4051_low_13 (Length: 384)
Name: NF4051_low_13
Description: NF4051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4051_low_13 |
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Alignment Details
Target: chr7 (Bit Score: 329; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 329; E-Value: 0
Query Start/End: Original strand, 1 - 366
Target Start/End: Complemental strand, 39937990 - 39937625
Alignment:
| Q |
1 |
taccatattgagagctagtagtatcagataatatacaataataagaagcaccatctgaatagccagcccttgattgaaactatcaaataatcacttatct |
100 |
Q |
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| T |
39937990 |
taccatattgagagctagtagtatcagataatatacaataataagaagcaccatctgaatagccagcccttgattgaaactatcaaataatcacttatct |
39937891 |
T |
|
| Q |
101 |
cctgaacataatcaagnnnnnnnttgagatactaagccatatttgatatataataaagattcagtacaaatttgaattaaagggttaaattggttcttgg |
200 |
Q |
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|||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |
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| T |
39937890 |
cctgaacataatcaagaaaaaaattgagatactaagccatatttgatatataataaagattcagtacaaatttgaattgaaggattaaattggttcttgg |
39937791 |
T |
|
| Q |
201 |
acacaggaaggttaaattggttctggaagttaatgtgctccagaagctcacgacacaggaacacagtaactgtatatcaaaatcattaaaacacagaata |
300 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||| |
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| T |
39937790 |
acacaggaaggttaaattggttctggaagttaatgtgctccagaagctcatgacacaagaacacagtaactgtatatcaaaatcattaaaacacagaata |
39937691 |
T |
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| Q |
301 |
ataaactaaccaaatcctgcaaaatactaagataaggcaatttacctgactggcgggtttctggtt |
366 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
39937690 |
ataaactaaccaaatcctgcaaaatactaagataaggcaatttacctgactggcgggtttctggtt |
39937625 |
T |
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