View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4051_low_26 (Length: 287)
Name: NF4051_low_26
Description: NF4051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4051_low_26 |
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Alignment Details
Target: chr6 (Bit Score: 222; Significance: 1e-122; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 222; E-Value: 1e-122
Query Start/End: Original strand, 1 - 276
Target Start/End: Complemental strand, 3948326 - 3948041
Alignment:
| Q |
1 |
gggatgaaagtaaagcaaccaggttcctcatgtaacgtaacttatggccttatgagggttagatgtaa--------cagagtactgatgctatatatgtt |
92 |
Q |
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| T |
3948326 |
gggatgaaagtaaagcaaccaggttcctcaagtaacgtaacttattgccttatgagggtgagatgtaaatatataacagagtactgatgctatatatgtt |
3948227 |
T |
|
| Q |
93 |
atatcaataaaagtagaaaaagaaaacaagagatgcatgacataactgtgccttactatgaaagtgagagaaagtaacaaaagaatgtgggagcaataac |
192 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||| |
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| T |
3948226 |
atatcaataaaagtagaaaaagaaaacaagagatgcatgacataactgtgccttcctatgaaagtgagcaaaagtaacaaaagaatgtgggagcaataac |
3948127 |
T |
|
| Q |
193 |
aaaattgtacaactactacgtagatagagtgtgaaagagaaataagaaaagtgtgatcattattg--agaggtaaaatcacaggtt |
276 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |
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| T |
3948126 |
aaaattgtacaactactacgtagatagagtgtgaaagagaaataagaaaagtgtgatcattattgagagaggtaaaatcacaggtt |
3948041 |
T |
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