View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4051_low_28 (Length: 266)
Name: NF4051_low_28
Description: NF4051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4051_low_28 |
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Alignment Details
Target: chr1 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 8 - 250
Target Start/End: Original strand, 28067478 - 28067720
Alignment:
| Q |
8 |
tagcataggggaatttgatgaaatcactgttgttttgagatatgttgattggtacaaaatattgtcgaattgaagctataccactatggtgcagctgaat |
107 |
Q |
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| T |
28067478 |
tagcataggggaatttgatgaaatcactgttgttttgcgatatgttatttggtataaaatattgtcgaattgcagctataccactatggtgcagctgaat |
28067577 |
T |
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| Q |
108 |
ttgaacaaaatacaattttccgcgatgggcgattgacaacaataatccttaattatcatcaactaacttcagtcctgataatatctatgttatgaaaagg |
207 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |
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| T |
28067578 |
ttgaacaaaatacaattttccgcgatgggcgattgacaacaataatccttaattatcatcaactaacttcagtcctgataatatctatgttatgaaaaag |
28067677 |
T |
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| Q |
208 |
acaacatgcacaaactaatccatatccatatctatgaatctat |
250 |
Q |
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| T |
28067678 |
acaacatgcacaaactaatccatatccatatctatgaatctat |
28067720 |
T |
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