View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4051_low_6 (Length: 511)

Name: NF4051_low_6
Description: NF4051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4051_low_6
NF4051_low_6
[»] chr5 (27 HSPs)
chr5 (191-496)||(32257126-32257429)
chr5 (1-157)||(26637748-26637904)
chr5 (1-152)||(14940267-14940418)
chr5 (1-156)||(14394468-14394623)
chr5 (1-156)||(15416664-15416819)
chr5 (1-156)||(37456680-37456835)
chr5 (1-156)||(3883946-3884101)
chr5 (1-157)||(13552982-13553138)
chr5 (191-442)||(32265989-32266246)
chr5 (75-156)||(30783435-30783516)
chr5 (1-76)||(30783538-30783612)
chr5 (88-156)||(16552637-16552705)
chr5 (90-154)||(16668794-16668858)
chr5 (88-156)||(33868155-33868223)
chr5 (1-55)||(28069266-28069320)
chr5 (1-55)||(34330157-34330211)
chr5 (90-154)||(13362772-13362835)
chr5 (90-154)||(25017217-25017280)
chr5 (90-156)||(28070153-28070218)
chr5 (90-156)||(34329127-34329192)
chr5 (91-151)||(4674965-4675025)
chr5 (90-154)||(18465556-18465620)
chr5 (90-157)||(23335707-23335773)
chr5 (200-278)||(33179262-33179340)
chr5 (90-129)||(42512225-42512264)
chr5 (25-55)||(16667721-16667751)
chr5 (26-55)||(2826098-2826127)
[»] chr6 (29 HSPs)
chr6 (1-158)||(1449540-1449697)
chr6 (1-152)||(6900807-6900958)
chr6 (1-156)||(15493174-15493329)
chr6 (1-156)||(7089082-7089237)
chr6 (8-159)||(1536814-1536965)
chr6 (5-156)||(31216662-31216813)
chr6 (75-155)||(34870071-34870151)
chr6 (1-76)||(34869974-34870049)
chr6 (95-153)||(30908655-30908713)
chr6 (2-55)||(35121490-35121542)
chr6 (1-51)||(878365-878415)
chr6 (90-156)||(35119239-35119300)
chr6 (2-55)||(33345356-33345408)
chr6 (98-153)||(7764444-7764499)
chr6 (93-156)||(33346374-33346436)
chr6 (90-154)||(18611190-18611254)
chr6 (88-142)||(4338618-4338672)
chr6 (88-142)||(16968021-16968075)
chr6 (21-55)||(24736574-24736608)
chr6 (21-55)||(24736610-24736644)
chr6 (97-153)||(12394387-12394442)
chr6 (99-151)||(27079939-27079991)
chr6 (90-125)||(24737691-24737726)
chr6 (90-129)||(29157252-29157291)
chr6 (90-156)||(15034975-15035040)
chr6 (90-156)||(22042300-22042365)
chr6 (90-156)||(28116828-28116893)
chr6 (107-157)||(32556343-32556393)
chr6 (90-156)||(34399641-34399706)
[»] scaffold0045 (1 HSPs)
scaffold0045 (1-156)||(33684-33839)
[»] chr4 (46 HSPs)
chr4 (1-157)||(11785973-11786129)
chr4 (1-157)||(11798140-11798296)
chr4 (1-157)||(51921176-51921332)
chr4 (1-156)||(13635636-13635791)
chr4 (1-156)||(49425968-49426123)
chr4 (1-157)||(30597698-30597854)
chr4 (1-156)||(15051047-15051202)
chr4 (1-156)||(27865648-27865803)
chr4 (1-156)||(49492423-49492578)
chr4 (1-156)||(35291459-35291614)
chr4 (1-156)||(53441320-53441475)
chr4 (12-156)||(1621875-1622020)
chr4 (4-156)||(36011843-36011995)
chr4 (5-156)||(46672439-46672589)
chr4 (2-156)||(55765481-55765635)
chr4 (84-156)||(10472497-10472569)
chr4 (77-156)||(26578176-26578255)
chr4 (77-154)||(38244946-38245023)
chr4 (1-55)||(638965-639019)
chr4 (1-55)||(45256866-45256920)
chr4 (1-54)||(50644642-50644695)
chr4 (88-156)||(25574126-25574194)
chr4 (90-153)||(1729615-1729678)
chr4 (1-55)||(10473619-10473673)
chr4 (99-153)||(20861583-20861637)
chr4 (1-55)||(26577280-26577334)
chr4 (95-153)||(30357810-30357868)
chr4 (95-152)||(38010145-38010202)
chr4 (88-157)||(50643742-50643810)
chr4 (6-55)||(51836351-51836400)
chr4 (88-152)||(16298925-16298989)
chr4 (94-154)||(24686574-24686634)
chr4 (110-149)||(805109-805148)
chr4 (90-157)||(27764239-27764305)
chr4 (90-156)||(26447412-26447477)
chr4 (90-152)||(36621701-36621762)
chr4 (90-156)||(45255975-45256040)
chr4 (88-153)||(22181243-22181307)
chr4 (15-55)||(38245889-38245929)
chr4 (90-129)||(4168384-4168423)
chr4 (88-154)||(29826604-29826669)
chr4 (90-126)||(637883-637919)
chr4 (90-156)||(14497006-14497071)
chr4 (90-156)||(50563729-50563794)
chr4 (25-54)||(9551625-9551654)
chr4 (90-126)||(38485674-38485710)
[»] chr1 (48 HSPs)
chr1 (1-157)||(49936848-49937004)
chr1 (1-156)||(24635926-24636081)
chr1 (1-156)||(25888939-25889094)
chr1 (3-156)||(50351803-50351956)
chr1 (1-157)||(43452541-43452697)
chr1 (1-156)||(18618835-18618990)
chr1 (1-156)||(20434633-20434788)
chr1 (1-156)||(48762242-48762397)
chr1 (1-166)||(19897671-19897836)
chr1 (1-157)||(6314114-6314271)
chr1 (1-156)||(16975954-16976110)
chr1 (53-156)||(28375464-28375567)
chr1 (77-157)||(4097895-4097975)
chr1 (77-156)||(34369660-34369739)
chr1 (79-156)||(11421594-11421671)
chr1 (77-153)||(23175509-23175585)
chr1 (1-54)||(23817412-23817465)
chr1 (1-55)||(4097128-4097182)
chr1 (95-153)||(21256777-21256835)
chr1 (5-55)||(23174425-23174475)
chr1 (88-152)||(31529663-31529727)
chr1 (90-157)||(37639340-37639407)
chr1 (1-55)||(11422541-11422595)
chr1 (1-55)||(21641613-21641667)
chr1 (1-54)||(180825-180878)
chr1 (1-54)||(23920990-23921043)
chr1 (88-152)||(33097409-33097473)
chr1 (90-156)||(18056784-18056849)
chr1 (95-153)||(31083365-31083423)
chr1 (90-156)||(35198181-35198247)
chr1 (6-55)||(34370488-34370537)
chr1 (91-152)||(51801734-51801795)
chr1 (3-55)||(8401423-8401475)
chr1 (88-152)||(44260522-44260586)
chr1 (88-152)||(44688608-44688672)
chr1 (110-149)||(37228364-37228403)
chr1 (95-153)||(20507286-20507344)
chr1 (93-156)||(22348039-22348101)
chr1 (110-149)||(41033946-41033985)
chr1 (95-156)||(41033262-41033322)
chr1 (106-154)||(13590469-13590517)
chr1 (93-129)||(16115877-16115913)
chr1 (99-159)||(20372202-20372262)
chr1 (88-156)||(28323330-28323398)
chr1 (99-156)||(13673891-13673948)
chr1 (26-55)||(16116998-16117027)
chr1 (25-54)||(23319078-23319107)
chr1 (88-156)||(23921896-23921963)
[»] chr8 (43 HSPs)
chr8 (2-157)||(41099181-41099336)
chr8 (1-156)||(19784271-19784426)
chr8 (1-156)||(41451105-41451260)
chr8 (1-156)||(10237354-10237509)
chr8 (1-156)||(34633232-34633387)
chr8 (1-157)||(1149934-1150090)
chr8 (12-156)||(43690640-43690784)
chr8 (15-156)||(7857680-7857821)
chr8 (1-156)||(15227030-15227185)
chr8 (1-156)||(30413914-30414069)
chr8 (1-55)||(4835537-4835591)
chr8 (1-55)||(4840982-4841036)
chr8 (1-54)||(1209758-1209811)
chr8 (95-153)||(9852273-9852331)
chr8 (95-153)||(34648133-34648191)
chr8 (1-55)||(39657727-39657781)
chr8 (1-54)||(2751207-2751260)
chr8 (93-156)||(15260854-15260917)
chr8 (95-149)||(23396484-23396538)
chr8 (90-157)||(32987445-32987511)
chr8 (95-153)||(35302591-35302649)
chr8 (107-153)||(40023279-40023325)
chr8 (88-152)||(13526669-13526733)
chr8 (88-152)||(13616204-13616268)
chr8 (88-156)||(42433701-42433768)
chr8 (93-152)||(40247288-40247347)
chr8 (90-156)||(39021975-39022040)
chr8 (99-156)||(2522867-2522924)
chr8 (90-130)||(8550529-8550569)
chr8 (90-157)||(1208708-1208774)
chr8 (90-157)||(12355421-12355488)
chr8 (94-156)||(7058114-7058175)
chr8 (1-47)||(7059144-7059190)
chr8 (106-152)||(10443586-10443632)
chr8 (94-156)||(40012186-40012247)
chr8 (90-127)||(4836701-4836738)
chr8 (90-127)||(4842146-4842183)
chr8 (88-152)||(28698578-28698643)
chr8 (90-129)||(7614094-7614133)
chr8 (110-157)||(18022052-18022099)
chr8 (90-156)||(15181790-15181856)
chr8 (96-142)||(30651963-30652009)
chr8 (1-30)||(15259874-15259903)
[»] chr3 (49 HSPs)
chr3 (1-156)||(9595891-9596046)
chr3 (1-156)||(26662449-26662604)
chr3 (1-157)||(9106266-9106422)
chr3 (1-156)||(2941837-2941992)
chr3 (1-156)||(30947822-30947977)
chr3 (1-158)||(3475318-3475475)
chr3 (1-156)||(19284671-19284826)
chr3 (3-156)||(47335032-47335185)
chr3 (1-156)||(6097595-6097750)
chr3 (4-155)||(33413927-33414078)
chr3 (1-156)||(46237669-46237824)
chr3 (1-156)||(54379163-54379317)
chr3 (1-152)||(26960630-26960781)
chr3 (1-156)||(10986352-10986507)
chr3 (1-55)||(50755163-50755217)
chr3 (95-153)||(51846785-51846843)
chr3 (5-55)||(19384404-19384454)
chr3 (87-158)||(51681999-51682070)
chr3 (95-153)||(34563352-34563410)
chr3 (95-153)||(41192355-41192413)
chr3 (88-156)||(19385313-19385380)
chr3 (88-156)||(47728388-47728456)
chr3 (88-156)||(51362436-51362503)
chr3 (88-152)||(53594972-53595036)
chr3 (5-48)||(31853164-31853207)
chr3 (1-55)||(51361542-51361596)
chr3 (97-156)||(23755285-23755344)
chr3 (90-156)||(7045300-7045365)
chr3 (90-154)||(50754008-50754071)
chr3 (93-156)||(23699327-23699390)
chr3 (93-156)||(23717782-23717845)
chr3 (93-156)||(23736238-23736301)
chr3 (90-157)||(28299952-28300019)
chr3 (99-154)||(32232993-32233048)
chr3 (90-129)||(52987650-52987689)
chr3 (90-156)||(8718101-8718166)
chr3 (90-156)||(9069988-9070053)
chr3 (88-152)||(37319458-37319522)
chr3 (12-55)||(7044387-7044430)
chr3 (110-157)||(9180111-9180158)
chr3 (93-152)||(16277417-16277475)
chr3 (90-156)||(8054713-8054778)
chr3 (90-132)||(39099220-39099262)
chr3 (1-30)||(8719133-8719162)
chr3 (1-30)||(9071020-9071049)
chr3 (25-54)||(47729134-47729163)
chr3 (25-53)||(23700056-23700084)
chr3 (25-53)||(23718511-23718539)
chr3 (25-53)||(23736967-23736995)
[»] chr7 (34 HSPs)
chr7 (1-156)||(16933154-16933310)
chr7 (1-156)||(16938537-16938693)
chr7 (1-156)||(30884133-30884288)
chr7 (1-156)||(46358520-46358675)
chr7 (1-156)||(763697-763852)
chr7 (1-156)||(47340146-47340302)
chr7 (1-156)||(31660069-31660224)
chr7 (1-156)||(41911023-41911175)
chr7 (1-141)||(35736963-35737103)
chr7 (67-156)||(20000651-20000740)
chr7 (90-157)||(5757385-5757452)
chr7 (1-55)||(46572593-46572647)
chr7 (1-55)||(48692021-48692075)
chr7 (88-153)||(11732645-11732710)
chr7 (88-152)||(34875493-34875557)
chr7 (95-153)||(24359874-24359932)
chr7 (88-156)||(44141249-44141317)
chr7 (1-55)||(15973879-15973933)
chr7 (1-55)||(32685863-32685917)
chr7 (88-157)||(15974934-15975002)
chr7 (88-156)||(39007647-39007715)
chr7 (90-157)||(30428872-30428938)
chr7 (90-157)||(46024026-46024092)
chr7 (88-156)||(25778837-25778904)
chr7 (5-48)||(48306331-48306373)
chr7 (99-156)||(6797394-6797451)
chr7 (106-157)||(48305236-48305285)
chr7 (90-157)||(10555948-10556014)
chr7 (93-156)||(48690895-48690957)
chr7 (90-156)||(27335629-27335694)
chr7 (1-31)||(34228624-34228654)
chr7 (93-154)||(46346719-46346780)
chr7 (25-53)||(46025013-46025041)
chr7 (90-156)||(46573500-46573563)
[»] scaffold0074 (1 HSPs)
scaffold0074 (1-156)||(24274-24429)
[»] chr2 (35 HSPs)
chr2 (1-156)||(7487165-7487320)
chr2 (1-156)||(8149831-8149986)
chr2 (1-156)||(8154455-8154610)
chr2 (5-156)||(15016481-15016632)
chr2 (1-156)||(39355035-39355190)
chr2 (1-154)||(34464713-34464866)
chr2 (1-157)||(1292090-1292246)
chr2 (15-157)||(9143584-9143726)
chr2 (77-156)||(2263573-2263652)
chr2 (1-55)||(18297187-18297241)
chr2 (95-156)||(18762867-18762928)
chr2 (5-65)||(18762928-18762988)
chr2 (1-55)||(25193962-25194016)
chr2 (88-154)||(5098718-5098784)
chr2 (90-156)||(18298111-18298176)
chr2 (95-153)||(41346045-41346103)
chr2 (88-156)||(25995286-25995354)
chr2 (90-157)||(20709773-20709839)
chr2 (110-149)||(21155441-21155480)
chr2 (110-149)||(27974291-27974330)
chr2 (110-149)||(28060820-28060859)
chr2 (90-156)||(25192892-25192957)
chr2 (88-157)||(36636935-36637004)
chr2 (7-55)||(2264625-2264673)
chr2 (88-140)||(39548058-39548110)
chr2 (13-48)||(4578590-4578625)
chr2 (96-151)||(40853685-40853740)
chr2 (90-156)||(4281788-4281854)
chr2 (88-142)||(16142073-16142127)
chr2 (90-155)||(14551319-14551382)
chr2 (88-152)||(13081858-13081922)
chr2 (15-50)||(14550465-14550500)
chr2 (110-156)||(3925578-3925624)
chr2 (90-156)||(44352679-44352744)
chr2 (99-151)||(24024633-24024685)
[»] scaffold0581 (1 HSPs)
scaffold0581 (2-156)||(8333-8487)
[»] scaffold0571 (2 HSPs)
scaffold0571 (75-156)||(661-742)
scaffold0571 (1-76)||(564-639)
[»] scaffold0338 (1 HSPs)
scaffold0338 (1-55)||(6484-6538)
[»] scaffold0238 (1 HSPs)
scaffold0238 (88-157)||(25230-25298)
[»] scaffold0097 (1 HSPs)
scaffold0097 (90-157)||(13612-13678)
[»] scaffold0544 (1 HSPs)
scaffold0544 (90-155)||(10675-10739)
[»] scaffold0558 (2 HSPs)
scaffold0558 (94-155)||(2448-2508)
scaffold0558 (94-155)||(5860-5920)
[»] scaffold0460 (1 HSPs)
scaffold0460 (99-156)||(1604-1661)
[»] scaffold0006 (2 HSPs)
scaffold0006 (99-156)||(209326-209383)
scaffold0006 (99-156)||(171505-171562)
[»] scaffold0189 (1 HSPs)
scaffold0189 (88-156)||(11188-11255)
[»] scaffold0069 (1 HSPs)
scaffold0069 (99-159)||(51356-51416)
[»] scaffold0337 (1 HSPs)
scaffold0337 (90-153)||(7020-7082)
[»] scaffold0050 (1 HSPs)
scaffold0050 (90-157)||(18980-19046)
[»] scaffold0023 (2 HSPs)
scaffold0023 (90-156)||(130466-130531)
scaffold0023 (90-156)||(134560-134625)
[»] scaffold0019 (1 HSPs)
scaffold0019 (95-157)||(164057-164118)
[»] scaffold0002 (1 HSPs)
scaffold0002 (106-156)||(450202-450252)
[»] scaffold0194 (1 HSPs)
scaffold0194 (25-53)||(28628-28656)


Alignment Details
Target: chr5 (Bit Score: 225; Significance: 1e-124; HSPs: 27)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 191 - 496
Target Start/End: Complemental strand, 32257429 - 32257126
Alignment:
Q  191 agatcagtttgaatgtaatctatgtgataaataagcatataataatgatgcttaattgcaaaattatcagtttatgccggtgggagaaaatgcaacaaaa 290  Q
    |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | || ||||||||||||||||    
T  32257429 agatcagtttaaatgtaatctatgtgataaataagcatataataatgatgcttaattgcaaaattctcagtttatgccagaggtagaaaatgcaacaaaa 32257330  T
Q  291 taaaagcataaccaagagtaaaaggcttatgagtatcaatcaacataaacactagtttcctcccnnnnnnnnttatagtaattttttgatcaagcaaata 390  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||||        |||||||||||||||||||||| |||||    
T  32257329 taaaagcataaccaagagtaaaaggcttatgagtatcaatcaacataaccactaatttcctccc--aaaaatttatagtaattttttgatcaaggaaata 32257232  T
Q  391 aaataaagaatgactaatgaatcaagaaggatttgtttaatattgctcaatttaacataaaaagtgcacatggggaaaatatttggttaaatacctcatt 490  Q
    ||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||    
T  32257231 aaataaagagtcactaatgaatcaagaaggatttgtttaatattgcacaatttaacataaaaagtgcacatggggaaaatatttggttaaatacctaatt 32257132  T
Q  491 catttt 496  Q
     |||||    
T  32257131 aatttt 32257126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 26637748 - 26637904
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26637748 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaaaattaaagaaatctgatggtt 26637847  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  26637848 gtgatgtgtttatgcacggtgcataagaaaatggcttatgcaccataacttttgcca 26637904  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 152
Target Start/End: Original strand, 14940267 - 14940418
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  14940267 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 14940366  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  14940367 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 14940418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 14394623 - 14394468
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  14394623 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttattcaaaataaaagaaatctgatggtt 14394524  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||| ||||||||||||||||||||||||  ||||||||||||||||||||||    
T  14394523 gtgatgtatttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 14394468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 15416819 - 15416664
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15416819 aatccttatgcaccgtgcataaatcccaacatgattgcttcctacactcccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 15416720  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  15416719 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 15416664  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 37456835 - 37456680
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  37456835 aatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaactatttttgttcaaaatgaaagaaatctgatggtt 37456736  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||| ||||||||||||||||||||| |||||||||||||||||||    
T  37456735 gtgatgtgtttatgtacggtgcataaggaaatggctcatgcaccataacttttgcc 37456680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 3883946 - 3884101
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  3883946 aatccttatgcaccgtgcataaatcccaatataattgcttcctacacctccaaagtgagccaaaaccatttttgttcaaaatgaaagaaatttgatggtt 3884045  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    || |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  3884046 gtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 3884101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 13553138 - 13552982
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||| |||||||| || ||||||||||||||||||  ||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  13553138 aatccttatgcaccgtgtataaatcctaatataattgcttcctacaccttcaaagtgagccaaaatcatttttgttcaaaataaaagaaatctgatggtt 13553039  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  13553038 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcca 13552982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 92; E-Value: 2e-44
Query Start/End: Original strand, 191 - 442
Target Start/End: Complemental strand, 32266246 - 32265989
Alignment:
Q  191 agatcagtttgaatgtaatctatgtgataaataagcatataataatgatgcttaattgcaaaattatcagtttatgccggtgggaga------------- 277  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| | ||||||                 
T  32266246 agatcaggttgaatgtaatctatgtgataaataagcatataataatgatgcttaattgcaaaattctcagtttatgccagagggagaatgtttctgatgc 32266147  T
Q  278 aaatgcaacaaaataaaagcataaccaagagtaaaaggcttatgagtatcaatcaacataaacactagtttcctcccnnnnnnnnttatagtaatttttt 377  Q
    |||||||||||||||||| ||||||||||||||||| || |||||||    |||||||||| ||||| ||| |||||        || | ||||||||||    
T  32266146 aaatgcaacaaaataaaaacataaccaagagtaaaatgcatatgagt----atcaacataaccactaattt-ctccc--aatttttttttgtaatttttt 32266054  T
Q  378 gatcaagcaaataaaataaagaatgactaatgaatcaagaaggatttgtttaata-ttgctcaatt 442  Q
    ||||||| ||||||||| |||| || ||||||||||||||||||||||||| ||| ||||||||||    
T  32266053 gatcaaggaaataaaat-aagagtgtctaatgaatcaagaaggatttgtttgatatttgctcaatt 32265989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 70; E-Value: 2e-31
Query Start/End: Original strand, 75 - 156
Target Start/End: Complemental strand, 30783516 - 30783435
Alignment:
Q  75 ttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30783516 ttcaaaatgaaagaaatctgatggttgcgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 30783435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 1 - 76
Target Start/End: Complemental strand, 30783612 - 30783538
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 76  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  30783612 aatccttatgcaccgtgcataaatcc-aacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 30783538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 16552637 - 16552705
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||||    
T  16552637 aaatatgatggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcataataacttttgcc 16552705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 16668794 - 16668858
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  16668794 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttttg 16668858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 33868223 - 33868155
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||||    
T  33868223 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgcc 33868155  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 28069266 - 28069320
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||| |||||||| |||||||||||||||||||||| |||||||    
T  28069266 aatccttatgcaccgagcataaattccaacataattgcttcctacacacccaaag 28069320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 34330211 - 34330157
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||| |||||||||||||||| |||| ||||||||    
T  34330211 aatccttatgcaccgtgcataaattccaacataattgcttcatacatccccaaag 34330157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 13362835 - 13362772
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||    
T  13362835 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttg 13362772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 25017217 - 25017280
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||    
T  25017217 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttg 25017280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 28070153 - 28070218
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||| ||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  28070153 atctgatagttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 28070218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 34329192 - 34329127
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| ||||||||||||||||||||| | | |  ||||||||||||||||||||||    
T  34329192 atctgatggttgtgaagtgtttatgcacggtgcataaag-atttccttatgcaccataacttttgcc 34329127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 91 - 151
Target Start/End: Complemental strand, 4675025 - 4674965
Alignment:
Q  91 tctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactt 151  Q
    |||||||||||||| ||||||||||| |||||||||||||||| |||| |||  |||||||    
T  4675025 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataactt 4674965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Original strand, 18465556 - 18465620
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||||||| ||||||||||| | ||||||| |||||| ||||||||  ||||||||||    
T  18465556 atctgatggttgtgaagtgtttatgcaggatgcataatgaaatgtcttatgcataataacttttg 18465620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 23335707 - 23335773
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||  ||||||||||||||||||| || | |  |||||||||||||||||||||||    
T  23335707 atctgatggttgtgaaatgtttatgcacggtgcatacgg-atttccttatgcaccataacttttgcca 23335773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 200 - 278
Target Start/End: Complemental strand, 33179340 - 33179262
Alignment:
Q  200 tgaatgtaatctatgtgataaataagcatataataatgat-gcttaattgcaaaattatcagtttatgccggtgggagaa 278  Q
    |||||||||||||||||||| |||  |||||||||| ||| | ||||||||||| || |||||||||||| | |||||||    
T  33179340 tgaatgtaatctatgtgatagatat-catataataacgattggttaattgcaaacttctcagtttatgccagagggagaa 33179262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 42512264 - 42512225
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataagga 129  Q
    ||||||||||||||| |||||||||||||||| |||||||    
T  42512264 atctgatggttgtgaagtgtttatgcacggtggataagga 42512225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 25 - 55
Target Start/End: Original strand, 16667721 - 16667751
Alignment:
Q  25 cccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||    
T  16667721 cccaacataattgcttcctacacccccaaag 16667751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 55
Target Start/End: Original strand, 2826098 - 2826127
Alignment:
Q  26 ccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||||||||||||||    
T  2826098 ccaacataattgcttcctacacccccaaag 2826127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 154; Significance: 2e-81; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 154; E-Value: 2e-81
Query Start/End: Original strand, 1 - 158
Target Start/End: Complemental strand, 1449697 - 1449540
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1449697 aatccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 1449598  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccag 158  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1449597 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccag 1449540  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 6900958 - 6900807
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  6900958 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 6900859  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||    
T  6900858 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttt 6900807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 15493329 - 15493174
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  15493329 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctaatggtt 15493230  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
     ||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  15493229 atgatgtgtttatgcacggtacataaggaaatggcttatgcaccataacttttgcc 15493174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 7089237 - 7089082
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  7089237 aatccttatgtaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatgatt 7089138  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  7089137 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 7089082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 8 - 159
Target Start/End: Original strand, 1536814 - 1536965
Alignment:
Q  8 atgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtgatgt 107  Q
    |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  1536814 atgcaccgtgcataaatcccaatataattgcttcctacacccccaaagcgagccaaaaccatttttattcaaaataaaagaaatctgatggttgtgatgt 1536913  T
Q  108 gtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccagt 159  Q
    |||||||||||||||||||||||||  |||||||||||||||||||||||||    
T  1536914 gtttatgcacggtgcataaggaaataacttatgcaccataacttttgccagt 1536965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 31216813 - 31216662
Alignment:
Q  5 cttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtga 104  Q
    |||||| |||||| |||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  31216813 cttatggaccgtgtataaattccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggttgtga 31216714  T
Q  105 tgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  31216713 tgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 31216662  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 75 - 155
Target Start/End: Original strand, 34870071 - 34870151
Alignment:
Q  75 ttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgc 155  Q
    |||||||| |||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||    
T  34870071 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatacatggtgcataaggaaatggcttatgcaccataacttttgc 34870151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 34869974 - 34870049
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 76  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||| |||||||||||||||||    
T  34869974 aatccttatgcaccgtgcataaatcctaacataattgcttcctacacctccaaagtgaaccaaaaccatttttgtt 34870049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 30908713 - 30908655
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  30908713 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 30908655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 2 - 55
Target Start/End: Complemental strand, 35121542 - 35121490
Alignment:
Q  2 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||    
T  35121542 atccttatgcaccgtgcataaatcccaacataattgctt-ctacacccccaaag 35121490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 878415 - 878365
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacaccccc 51  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||    
T  878415 aatccttatgtaccgtgcataaatcccaacataattacttcctacaccccc 878365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 35119300 - 35119239
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| ||||||||||||||||||||||||     ||||||||||||||||||||||    
T  35119300 atctgatggttgtgaagtgtttatgcacggtgcataagga-----cttatgcaccataacttttgcc 35119239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 2 - 55
Target Start/End: Original strand, 33345356 - 33345408
Alignment:
Q  2 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||| ||||||    
T  33345356 atccttatgcaccgtgcataaatcccaacataattgctt-ctacacctccaaag 33345408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 98 - 153
Target Start/End: Complemental strand, 7764499 - 7764444
Alignment:
Q  98 gttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    ||||||| |||||||| ||||| ||||||| |||||||||||||||||||||||||    
T  7764499 gttgtgaagtgtttatacacggcgcataagaaaatggcttatgcaccataactttt 7764444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 33346374 - 33346436
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  33346374 tgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 33346436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 18611254 - 18611190
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||||||| |||||||||||  |||||||| |||||| ||||||||  ||||||||||    
T  18611254 atctgatggttgtgaagtgtttatgcagagtgcataaagaaatgtcttatgcataataacttttg 18611190  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 4338618 - 4338672
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 142  Q
    |||||||||| || ||| ||||||||||| |||||||||| ||||||||||||||    
T  4338618 aaatctgatgattttgaagtgtttatgcagggtgcataagaaaatggcttatgca 4338672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 16968021 - 16968075
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 142  Q
    |||| |||||||| ||| ||||||||||| |||||||||| ||||||||||||||    
T  16968021 aaatttgatggttatgaagtgtttatgcagggtgcataagaaaatggcttatgca 16968075  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 24736574 - 24736608
Alignment:
Q  21 aaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||    
T  24736574 aaatcccaacataattgcttcctacacccccaaag 24736608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 21 - 55
Target Start/End: Original strand, 24736610 - 24736644
Alignment:
Q  21 aaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||    
T  24736610 aaatcccaacataattgcttcctacacccccaaag 24736644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 97 - 153
Target Start/End: Original strand, 12394387 - 12394442
Alignment:
Q  97 ggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||| ||||||||||||||||||||||| | |  |||||||||||||||||||    
T  12394387 ggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataactttt 12394442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 27079939 - 27079991
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactt 151  Q
    |||||| |||||||||||||||||||||| ||||| ||||||||  |||||||    
T  27079939 ttgtgaagtgtttatgcacggtgcataagaaaatgacttatgcataataactt 27079991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 125
Target Start/End: Original strand, 24737691 - 24737726
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcata 125  Q
    ||||||||||||||| ||||||||||||||||||||    
T  24737691 atctgatggttgtgaagtgtttatgcacggtgcata 24737726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 29157291 - 29157252
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataagga 129  Q
    ||||||||||||| | ||||||||||||||||||||||||    
T  29157291 atctgatggttgtaaagtgtttatgcacggtgcataagga 29157252  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 15034975 - 15035040
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||    |||||||||||||||||||||  |  ||||||||||||||||||||||    
T  15034975 atctgatggttgtgaatgatttatgcacggtgcataaggatttc-cttatgcaccataacttttgcc 15035040  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 22042300 - 22042365
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||    ||||||| ||||||||||  | |||||||||||||||||||||||||    
T  22042300 atctgatggttgtgattaacttatgcatggtgcataagtta-tggcttatgcaccataacttttgcc 22042365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 28116893 - 28116828
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| |   ||||||| ||||||||||  | |||||||||||||||||||||||||    
T  28116893 atctgatggttgtgaagatcttatgcatggtgcataagtta-tggcttatgcaccataacttttgcc 28116828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 107 - 157
Target Start/End: Complemental strand, 32556393 - 32556343
Alignment:
Q  107 tgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||| |||||||||| ||||| ||||||||  |||||||||||||    
T  32556393 tgtttatgcagggtgcataagaaaatgacttatgcataataacttttgcca 32556343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 34399706 - 34399641
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||| |||||| ||||||||  ||||||||||||| | |  ||||||||||||||||||||||    
T  34399706 atctgatgattgtgaagtgtttatatacggtgcataagg-atttccttatgcaccataacttttgcc 34399641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0045 (Bit Score: 148; Significance: 7e-78; HSPs: 1)
Name: scaffold0045
Description:

Target: scaffold0045; HSP #1
Raw Score: 148; E-Value: 7e-78
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 33839 - 33684
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  33839 aatctttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggtt 33740  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  33739 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 33684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 4e-76; HSPs: 46)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11786129 - 11785973
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11786129 aatccttatgcaccgtgcataaatcccaacataattgcttcctacaccccaaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggtt 11786030  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11786029 gtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttttgcca 11785973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 11798296 - 11798140
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  11798296 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggtt 11798197  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  11798196 gtgatgtgtttatgcacggtgcataaggaaatggtttatgcaccataacttttgcca 11798140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 51921176 - 51921332
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  51921176 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 51921275  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  51921276 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcca 51921332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 13635636 - 13635791
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  13635636 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagtcaaaaccatttttattcaaaatgaaagaaatctgatggtt 13635735  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  13635736 gtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 13635791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49425968 - 49426123
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  49425968 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatttgatggtt 49426067  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  49426068 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 49426123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 30597854 - 30597698
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||| |||||||||||||||||    
T  30597854 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccagagtgagccaaaatcatttttgttcaaaataaaagaaatctgatggtt 30597755  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  30597754 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcca 30597698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 15051047 - 15051202
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  15051047 aatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaaaataaaagaaatctgatggtt 15051146  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  15051147 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 15051202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 27865648 - 27865803
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||| |||||||||||||||||    
T  27865648 aatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaattatttttgttcaaaatgaaagaaatctgatggtt 27865747  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||| ||||||||||||||||| ||||||||||||    
T  27865748 gtgatgtgtttatgcacggtgcatatggaaatggcttatgcactataacttttgcc 27865803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 49492423 - 49492578
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  49492423 aatccttatgcaccgtgcataaatcccaacataattgcttcctacactcctaaagtgagtcaaaaccatttttattcaaaatgaaagaaatctgatggtt 49492522  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  49492523 gtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 49492578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 35291459 - 35291614
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||| ||| |||||| ||||||    
T  35291459 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaattgagccaaaactatttttgttcaaaataaaataaatcttatggtt 35291558  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  35291559 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 35291614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 53441475 - 53441320
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  53441475 aatccttatgcaccgggcataaattccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatttgatggtt 53441376  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||| |||||||||||||  ||||||||||||||||||||||    
T  53441375 gtgatgtgtttatgcacgatgcataaggaaataacttatgcaccataacttttgcc 53441320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 1622020 - 1621875
Alignment:
Q  12 accgtgcataaatcccaacataattgcttcctacaccccc-aaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtt 110  Q
    |||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||||||||||| |||||||||||||||||||||||||||    
T  1622020 accgtgcataaatcccaacataattgcttcctacaccccccaaagttagtcaaaaccatttttgttcaaaattaaagaaatctgatggttgtgatgtgtt 1621921  T
Q  111 tatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||    
T  1621920 tatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 1621875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 4 - 156
Target Start/End: Complemental strand, 36011995 - 36011843
Alignment:
Q  4 ccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtg 103  Q
    |||||||||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||||||||||||||||||    
T  36011995 ccttatgcaccgtgtataaatctcaacataattgcttcctacacccctaaagtgagccaaaactatttttgttcaaaataaaagaaatctgatggttgtg 36011896  T
Q  104 atgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  36011895 atgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 36011843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 5 - 156
Target Start/End: Complemental strand, 46672589 - 46672439
Alignment:
Q  5 cttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtga 104  Q
    |||||||| ||||||||||||||||||| ||||||||||||||||| ||||||||||||||| ||||||||||||||| ||| |||||||||||||||||    
T  46672589 cttatgcatcgtgcataaatcccaacatgattgcttcctacacccc-aaagtgagccaaaactatttttgttcaaaataaaataaatctgatggttgtga 46672491  T
Q  105 tgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  46672490 tgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46672439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 115; E-Value: 3e-58
Query Start/End: Original strand, 2 - 156
Target Start/End: Complemental strand, 55765635 - 55765481
Alignment:
Q  2 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttg 101  Q
    |||||||||||||||||||||||||||| ||||||||||| || ||||  |||||||| ||||| |||||||||||||||| ||||||||||||||||||    
T  55765635 atccttatgcaccgtgcataaatcccaatataattgcttcatatacccttaaagtgagtcaaaatcatttttgttcaaaatgaaagaaatctgatggttg 55765536  T
Q  102 tgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    | |||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  55765535 taatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 55765481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 84 - 156
Target Start/End: Complemental strand, 10472569 - 10472497
Alignment:
Q  84 aaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  10472569 aaagaaatctgatggttgtgaaatgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 10472497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 77 - 156
Target Start/End: Original strand, 26578176 - 26578255
Alignment:
Q  77 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| ||||||||||||||||||||| ||||||||||||| ||||||| ||||||||||||||||||| |||||||||    
T  26578176 caaaatgaaagaaatctgatggttgtgaagtgtttatgcacgatgcataaagaaatggcttatgcaccatgacttttgcc 26578255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 77 - 154
Target Start/End: Complemental strand, 38245023 - 38244946
Alignment:
Q  77 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    |||||| ||||||||||||||||||||| ||||||||| || ||||| ||||||||||||||||||||||||||||||    
T  38245023 caaaataaaagaaatctgatggttgtgaagtgtttatgaactgtgcagaaggaaatggcttatgcaccataacttttg 38244946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 639019 - 638965
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  639019 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 638965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 45256920 - 45256866
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  45256920 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 45256866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 50644695 - 50644642
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 54  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||    
T  50644695 aatccttatgcaccgtgcataaatcccaacataattgcttcctatacccccaaa 50644642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 25574126 - 25574194
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||||    
T  25574126 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgcc 25574194  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 153
Target Start/End: Original strand, 1729615 - 1729678
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    ||||||||||||||| |||||||||||||||| |||| |||||| |||||||||||||||||||    
T  1729615 atctgatggttgtgaagtgtttatgcacggtgtataaagaaatgacttatgcaccataactttt 1729678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 10473673 - 10473619
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  10473673 aatccttatgcaccgtgcataaattccaacctaattgcttcctacacccccaaag 10473619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 99 - 153
Target Start/End: Complemental strand, 20861637 - 20861583
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  20861637 ttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataactttt 20861583  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 26577280 - 26577334
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||||||||    
T  26577280 aatccttatgcaccgtgcataaatttcaacataattgcttcctacacccccaaag 26577334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 30357868 - 30357810
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| |||||||||||||||||||||||||||| |||||| ||||||||||||    
T  30357868 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgaaccataactttt 30357810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 95 - 152
Target Start/End: Complemental strand, 38010202 - 38010145
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    |||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||    
T  38010202 atggttgtgaagtgtttatgcatggtgcataaggaaatgacttatgcaccataacttt 38010145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Complemental strand, 50643810 - 50643742
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||| ||| ||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  50643810 aaatctgatggttatgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcca 50643742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Original strand, 51836351 - 51836400
Alignment:
Q  6 ttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||| ||||||||||||||||||||||||||||||||||||| ||||    
T  51836351 ttatgcatcgtgcataaatcccaacataattgcttcctacacccctaaag 51836400  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 16298989 - 16298925
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| ||| ||||||| |||||||||||||||| ||||||||  ||||||||    
T  16298989 aaatctgatggttgtgaagtgattatgcagggtgcataaggaaatgacttatgcataataacttt 16298925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 94 - 154
Target Start/End: Complemental strand, 24686634 - 24686574
Alignment:
Q  94 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  24686634 gatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttg 24686574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 805148 - 805109
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataac 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  805148 ttatgcacggtgcataaggaaatggcttatgcaccataac 805109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 27764305 - 27764239
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||| || ||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  27764305 atctgatggttgcgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcca 27764239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 26447412 - 26447477
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  |||||||||||| |||||||||    
T  26447412 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccattacttttgcc 26447477  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 152
Target Start/End: Original strand, 36621701 - 36621762
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||    
T  36621701 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttt 36621762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 45256040 - 45255975
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||| ||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  45256040 atctgatagttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 45255975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 22181243 - 22181307
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    ||||||||||||||||| || |||||||||||||||||||| | |  |||||||||||||||||||    
T  22181243 aaatctgatggttgtgaagtttttatgcacggtgcataagg-atttccttatgcaccataactttt 22181307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 15 - 55
Target Start/End: Complemental strand, 38245929 - 38245889
Alignment:
Q  15 gtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||||||| |||||||||||||||||    
T  38245929 gtgcataaatcccaacataattgtttcctacacccccaaag 38245889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 4168423 - 4168384
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataagga 129  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  4168423 atctgatggttgtgaagtgtttatgcacggtgcataagga 4168384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 154
Target Start/End: Original strand, 29826604 - 29826669
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||||||||| ||| ||||||||||||||||||| | |  |||||| |||||||||||||    
T  29826604 aaatctgatggttgtgaagtgcttatgcacggtgcataagg-atttccttatgtaccataacttttg 29826669  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 90 - 126
Target Start/End: Complemental strand, 637919 - 637883
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataa 126  Q
    ||||||||||||||| |||||||||||||||||||||    
T  637919 atctgatggttgtgaagtgtttatgcacggtgcataa 637883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 14497071 - 14497006
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| |   ||||||| ||||||||||  | |||||||||||||||||||||||||    
T  14497071 atctgatggttgtgaagaccttatgcatggtgcataagtta-tggcttatgcaccataacttttgcc 14497006  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 50563729 - 50563794
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| ||||||||||| ||||||| | |||||  ||||||||  ||||||||||||    
T  50563729 atctgatggttgtgaagtgtttatgcagggtgcat-atgaaatatcttatgcataataacttttgcc 50563794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 54
Target Start/End: Original strand, 9551625 - 9551654
Alignment:
Q  25 cccaacataattgcttcctacacccccaaa 54  Q
    ||||||||||||||||||||||||||||||    
T  9551625 cccaacataattgcttcctacacccccaaa 9551654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 126
Target Start/End: Original strand, 38485674 - 38485710
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataa 126  Q
    ||||||||||||||| | |||||||||||||||||||    
T  38485674 atctgatggttgtgaagcgtttatgcacggtgcataa 38485710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 145; Significance: 4e-76; HSPs: 48)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 4e-76
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 49936848 - 49937004
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  49936848 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaaaatgaaagaaatctgatggtt 49936947  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  49936948 gtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcca 49937004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 24636081 - 24635926
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  24636081 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 24635982  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  24635981 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 24635926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 25888939 - 25889094
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  25888939 aatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 25889038  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  25889039 gtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 25889094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 138; E-Value: 6e-72
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 50351956 - 50351803
Alignment:
Q  3 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgt 102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||    
T  50351956 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccataaccatttttgttcaaaatgatagaaatctgatggttgt 50351857  T
Q  103 gatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  50351856 gatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 50351803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 137; E-Value: 3e-71
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 43452697 - 43452541
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  43452697 aatccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatagtt 43452598  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  43452597 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcca 43452541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 18618990 - 18618835
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||    
T  18618990 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaacaatttttgttcaaaataaaagaaatctgatggtt 18618891  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||   |||||||||||||||||||||    
T  18618890 gtgatgtgtttatgcacggtgcataaggaaataatttatgcaccataacttttgcc 18618835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 20434633 - 20434788
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||| ||||||    
T  20434633 aatcattatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaaaatgaaagaaatctaatggtt 20434732  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  20434733 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 20434788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 48762242 - 48762397
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||| ||||||    
T  48762242 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaaaataaaagaaatctaatggtt 48762341  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  48762342 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 48762397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 166
Target Start/End: Original strand, 19897671 - 19897836
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  19897671 aatccttatgcaccgtgcagaaatcccaacataattgcttcctacacctccaaagtgagccaaaatcatttttgttcaaaataaaagaaatctgatggtt 19897770  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccagtgaaaaca 166  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||||| | ||||||    
T  19897771 gtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccattaaaaaca 19897836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 126; E-Value: 9e-65
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 6314271 - 6314114
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccattttt-gttcaaaatcaaagaaatctgatggt 99  Q
    ||||||||||||||||  |||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| |||||||| ||||||     
T  6314271 aatccttatgcaccgtatataaatcccaacataattgcttcctacatccccaaagtgagccaaaaccattttttgttcaaaatgaaagaaatttgatggc 6314172  T
Q  100 tgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  6314171 tgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 6314114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 16976110 - 16975954
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccat-ttttgttcaaaatcaaagaaatctgatggt 99  Q
    |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||||    
T  16976110 aatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccattttttgttcaaaataaaagaaatctgatggt 16976011  T
Q  100 tgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||| ||||||||||||||||||  |||||| |||||||||||||||    
T  16976010 tgtgatgtgtttatacacggtgcataaggaaataacttatgaaccataacttttgcc 16975954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 53 - 156
Target Start/End: Complemental strand, 28375567 - 28375464
Alignment:
Q  53 aagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||| |||||| ||||||||| ||||| ||| ||||||||||||||||||||||||||||||||||||||| |||||  ||||||||||||||||||    
T  28375567 aagtgagtcaaaactatttttgtttaaaataaaaaaaatctgatggttgtgatgtgtttatgcacggtgcataaagaaataacttatgcaccataacttt 28375468  T
Q  153 tgcc 156  Q
    ||||    
T  28375467 tgcc 28375464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 77 - 157
Target Start/End: Original strand, 4097895 - 4097975
Alignment:
Q  77 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||| |||||||| |||||||||||| ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  4097895 caaaatgaaagaaatttgatggttgtgaagtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcca 4097975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 64; E-Value: 9e-28
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 34369739 - 34369660
Alignment:
Q  77 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| ||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| |||||||    
T  34369739 caaaatgaaagaaatctgatggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataatttttgcc 34369660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 79 - 156
Target Start/End: Complemental strand, 11421671 - 11421594
Alignment:
Q  79 aaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||| ||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||||||||||    
T  11421671 aaatgaaagaaatctgatggttgtgaagtgtttatgcacggtgcataaggaaatgatttatgcaccataacttttgcc 11421594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 77 - 153
Target Start/End: Original strand, 23175509 - 23175585
Alignment:
Q  77 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||| |||||||| |||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||    
T  23175509 caaaatgaaagaaatttgatggttgtgaagtgtttatgcacggcgcataaggaaatggcttatgcaccataactttt 23175585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 23817465 - 23817412
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23817465 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 23817412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4097128 - 4097182
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  4097128 aatccttatgcaccgtgcttaaatcccaacataattgcttcctacacccccaaag 4097182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 21256777 - 21256835
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||    
T  21256777 atggttgtgaagtgtttatgcacggtgcataagaaaatggcttatgcaccataactttt 21256835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 23174425 - 23174475
Alignment:
Q  5 cttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23174425 cttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 23174475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 31529663 - 31529727
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||||||    
T  31529663 aaatctgatggttgtgaagtgtttatgcatggtgcataaggaaatggcttatgcataataacttt 31529727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 37639407 - 37639340
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||| ||||||||||| |||||||||||||||| ||||||||  |||||||||||||    
T  37639407 atctgatggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttttgcca 37639340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 11422595 - 11422541
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||| ||||||||||| ||||||||||||||||||||||||||||||    
T  11422595 aatccttatgcatcgtgcataaattccaacataattgcttcctacacccccaaag 11422541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 21641613 - 21641667
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||| ||||||    
T  21641613 aatccttatgcaccgtgcacaaatcccaacataattgcttcctacaccaccaaag 21641667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 180878 - 180825
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 54  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||    
T  180878 aatccttatgcaccgtgtataaatcccaacataattgcttcctacactcccaaa 180825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 1 - 54
Target Start/End: Original strand, 23920990 - 23921043
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 54  Q
    |||||||||||| |||||||||||||||||||||||| ||||||||||||||||    
T  23920990 aatccttatgcatcgtgcataaatcccaacataattgtttcctacacccccaaa 23921043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 33097473 - 33097409
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  33097473 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 33097409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 18056849 - 18056784
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  18056849 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 18056784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 31083423 - 31083365
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| ||||||||| | ||| ||||||||||||||||||||||||||||||||    
T  31083423 atggttgtgaagtgtttatgaatggtacataaggaaatggcttatgcaccataactttt 31083365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 35198181 - 35198247
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||| ||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||||    
T  35198181 atctgatggctgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttttgcc 35198247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 6 - 55
Target Start/End: Complemental strand, 34370537 - 34370488
Alignment:
Q  6 ttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||||| ||||||||||||||||||||| ||||||    
T  34370537 ttatgcaccgtgcataaatcctaacataattgcttcctacacctccaaag 34370488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 91 - 152
Target Start/End: Original strand, 51801734 - 51801795
Alignment:
Q  91 tctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    |||||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  51801734 tctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 51801795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 3 - 55
Target Start/End: Original strand, 8401423 - 8401475
Alignment:
Q  3 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||| |||||||||||||||||||||||||| |||||||||| ||||||    
T  8401423 tccttatgtaccgtgcataaatcccaacataattgtttcctacacctccaaag 8401475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 44260586 - 44260522
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||| |||| |||  ||||||||    
T  44260586 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttacgcataataacttt 44260522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 44688608 - 44688672
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| |||||||||||  ||||||||||||||| ||||||||  ||||||||    
T  44688608 aaatctgatggttgtgaagtgtttatgcagcgtgcataaggaaatgacttatgcatgataacttt 44688672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 37228364 - 37228403
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataac 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  37228364 ttatgcacggtgcataaggaaatggcttatgcaccataac 37228403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 20507286 - 20507344
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    ||||||||||  | |||||||||  ||||||||||||||||||||||||||||||||||    
T  20507286 atggttgtgaaatatttatgcacaatgcataaggaaatggcttatgcaccataactttt 20507344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 22348101 - 22348039
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||| |||||||||| |||||||||||| | |  ||||||||||||||||||||||    
T  22348101 tgatggttgtgaagtgtttatgcgcggtgcataagg-atttccttatgcaccataacttttgcc 22348039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 41033946 - 41033985
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataac 149  Q
    |||||||||||||||||||||||| |||||||||||||||    
T  41033946 ttatgcacggtgcataaggaaatgacttatgcaccataac 41033985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 41033322 - 41033262
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||| | |||||| | |||||||||||||||  ||||||||||||||||||||||    
T  41033322 atggttgtgatttctttatgtatggtgcataaggaaatc-cttatgcaccataacttttgcc 41033262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 154
Target Start/End: Complemental strand, 13590517 - 13590469
Alignment:
Q  106 gtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  13590517 gtgtttatgcagggtgcataaggaaatgacttatgcataataacttttg 13590469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 93 - 129
Target Start/End: Complemental strand, 16115913 - 16115877
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataagga 129  Q
    |||||||||||| ||||||||||||||||||||||||    
T  16115913 tgatggttgtgaagtgtttatgcacggtgcataagga 16115877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 20372262 - 20372202
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccagt 159  Q
    |||||| ||||||||||| |||||||||| ||||| ||||||||  |||| ||||||||||    
T  20372262 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataatttttgccagt 20372202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 28323330 - 28323398
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||  ||||||||| | |||||||||  ||||| ||||||||  ||||||||||||    
T  28323330 aaatctgatggttgtgtagtgtttatggagggtgcataaaaaaatgacttatgcataataacttttgcc 28323398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 13673948 - 13673891
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| |||||||| || |||||||||||||||| ||||||||  |||| |||||||    
T  13673948 ttgtgaagtgtttatacagggtgcataaggaaatgacttatgcataataatttttgcc 13673891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 26 - 55
Target Start/End: Complemental strand, 16117027 - 16116998
Alignment:
Q  26 ccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||||||||||||||    
T  16117027 ccaacataattgcttcctacacccccaaag 16116998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 54
Target Start/End: Original strand, 23319078 - 23319107
Alignment:
Q  25 cccaacataattgcttcctacacccccaaa 54  Q
    ||||||||||||||||||||||||||||||    
T  23319078 cccaacataattgcttcctacacccccaaa 23319107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 23921896 - 23921963
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||| ||| ||| ||||||||| ||||||||| | |  ||||||||| ||||||||||||    
T  23921896 aaatctgatggttatgaagtgcttatgcacgatgcataagg-atttccttatgcacaataacttttgcc 23921963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 144; Significance: 2e-75; HSPs: 43)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 2 - 157
Target Start/End: Complemental strand, 41099336 - 41099181
Alignment:
Q  2 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttg 101  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||    
T  41099336 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggttg 41099237  T
Q  102 tgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  41099236 tgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcca 41099181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19784426 - 19784271
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  19784426 aatccttatgcattgtgcataaatcccaacataattgcttcctacaccctcaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 19784327  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19784326 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 19784271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 41451260 - 41451105
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||||| ||    
T  41451260 aatccttatgcactgtgcataaatcccaacataattgcttcctacacctccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatgatt 41451161  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  41451160 gtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 41451105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10237509 - 10237354
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  10237509 aatccttatgcaccgtgtataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgttcaaaataaaaaaaatctgatggtt 10237410  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  10237409 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 10237354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 34633232 - 34633387
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34633232 aatccttatgcaccgtgcataaatcccaacataattgcttcttacaccctcaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 34633331  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  |||||| |||||||||||||||    
T  34633332 gtgatgtgtttatgcacggtgcataaggaaataacttatgtaccataacttttgcc 34633387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 129; E-Value: 2e-66
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1149934 - 1150090
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  1149934 aatccttatgcaccgtgcataaattccaacataattgcttcctacacctccaaagtgagccaaaaccatttttgttcaaaataaaagaaatatgatggtt 1150033  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||||||||||||||| |||  |||||||||||||||||||||||    
T  1150034 gtgatgtgtttatgcacggtgcataagggaataacttatgcaccataacttttgcca 1150090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 12 - 156
Target Start/End: Complemental strand, 43690784 - 43690640
Alignment:
Q  12 accgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgttt 111  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||    
T  43690784 accgtgcataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgttcaaaataaaaaaaatctgatggttgtgatgtgttt 43690685  T
Q  112 atgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||||  ||||||||||||||||||||||    
T  43690684 atgcacggtgcataaggaaataacttatgcaccataacttttgcc 43690640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 15 - 156
Target Start/End: Complemental strand, 7857821 - 7857680
Alignment:
Q  15 gtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatg 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||| ||||||||||||||||    
T  7857821 gtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaattaaaaaaatctgatgattgtgatgtgtttatg 7857722  T
Q  115 cacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||| ||||||| ||||||||||||||||||||||||||||    
T  7857721 cacggcgcataagaaaatggcttatgcaccataacttttgcc 7857680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 120; E-Value: 4e-61
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 15227185 - 15227030
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||| |||||||||||||||||||||||||||||  |  ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  15227185 aatccttatgcaccgtacataaatcccaacataattgcttcctacattcttaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 15227086  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    || |||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  15227085 gtaatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 15227030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 30414069 - 30413914
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||| ||||||||||||||||||||||||||||||||||||||||| | | | ||||||  ||||||||||||||||||||| |||||||||||||||||    
T  30414069 aatctttatgcaccgtgcataaatcccaacataattgcttcctacatctctagagtgaggtaaaaccatttttgttcaaaattaaagaaatctgatggtt 30413970  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  30413969 gtgatgtgtttatgcacggtgcataaggaaatgacttatgcagcataacttttgcc 30413914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4835537 - 4835591
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4835537 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 4835591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 4840982 - 4841036
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  4840982 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 4841036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 1209811 - 1209758
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 54  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  1209811 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 1209758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 9852331 - 9852273
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  9852331 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 9852273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 34648133 - 34648191
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||    
T  34648133 atggttgtgaagtgtttatgcacggtgcataaggaaatgacttatgcaccataactttt 34648191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 39657727 - 39657781
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  39657727 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccctaaag 39657781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 1 - 54
Target Start/End: Complemental strand, 2751260 - 2751207
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaa 54  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  2751260 aatccttatgcaccgtgcatgaatcccaacataattgcttcctacacccccaaa 2751207  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 93 - 156
Target Start/End: Original strand, 15260854 - 15260917
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||| ||||||||||||||||||||||||||   ||||||||||||||||||||||    
T  15260854 tgatggttgtgaagtgtttatgcacggtgcataaggaaaatccttatgcaccataacttttgcc 15260917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 149
Target Start/End: Complemental strand, 23396538 - 23396484
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataac 149  Q
    |||||||| | ||||||||||||||||||||||||||||||||||||||||||||    
T  23396538 atggttgtaaagtgtttatgcacggtgcataaggaaatggcttatgcaccataac 23396484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 32987445 - 32987511
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  32987445 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcca 32987511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 35302591 - 35302649
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| |||||||||||||||||||||| ||||| | |||||||||||||||||    
T  35302591 atggttgtgaagtgtttatgcacggtgcataagaaaatgtcctatgcaccataactttt 35302649  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 107 - 153
Target Start/End: Original strand, 40023279 - 40023325
Alignment:
Q  107 tgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||    
T  40023279 tgtttatgcacggtgtataaggaaatggcttatgcaccataactttt 40023325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 13526669 - 13526733
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||||||||  ||||||||    
T  13526669 aaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataacttt 13526733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 13616204 - 13616268
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| |||||||||||  || |||||||||||||||||||||  ||||||||    
T  13616204 aaatctgatggttgtgaagtgtttatgcagagtacataaggaaatggcttatgcataataacttt 13616268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 42433768 - 42433701
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||| ||| ||||||||||||||||||| | |  ||||||||||||||||||||||    
T  42433768 aaatctgatggttgtgaagtgcttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 42433701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 40247288 - 40247347
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    |||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||    
T  40247288 tgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttt 40247347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 39022040 - 39021975
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||| |||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  39022040 atctgatgattgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 39021975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 2522924 - 2522867
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||||    
T  2522924 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgcc 2522867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 130
Target Start/End: Complemental strand, 8550569 - 8550529
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaa 130  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  8550569 atctgatggttgtgaagtgtttatgcacggtgcataaggaa 8550529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 1208774 - 1208708
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||| |||||||| | ||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  1208774 atcttatggttgtaaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcca 1208708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 12355488 - 12355421
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||| |||||||||| ||||||||||| |||||||||| ||||| |||||||   |||||||||||||    
T  12355488 atctaatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcgtaataacttttgcca 12355421  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Complemental strand, 7058175 - 7058114
Alignment:
Q  94 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||| ||||||||||||||||||||| | | |  ||||||||||||||||||||||    
T  7058175 gatggttgtgaagtgtttatgcacggtgcataa-gtatttccttatgcaccataacttttgcc 7058114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 7059190 - 7059144
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacac 47  Q
    |||| ||||||||||||||||||| |||||||||||| |||||||||    
T  7059190 aatcattatgcaccgtgcataaattccaacataattgtttcctacac 7059144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 106 - 152
Target Start/End: Original strand, 10443586 - 10443632
Alignment:
Q  106 gtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||| |||||||||||||||||||||||||  ||||||||    
T  10443586 gtgtttatgcagggtgcataaggaaatggcttatgcataataacttt 10443632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 94 - 156
Target Start/End: Original strand, 40012186 - 40012247
Alignment:
Q  94 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||| | || |||||||| |||||||||||||||  ||||||||||||||||||||||    
T  40012186 gatggttgtaaagtctttatgcatggtgcataaggaaat-ccttatgcaccataacttttgcc 40012247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 4836701 - 4836738
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataag 127  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4836701 atctgatggttgtgaagtgtttatgcacggtgcataag 4836738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 127
Target Start/End: Original strand, 4842146 - 4842183
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataag 127  Q
    ||||||||||||||| ||||||||||||||||||||||    
T  4842146 atctgatggttgtgaagtgtttatgcacggtgcataag 4842183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 28698578 - 28698643
Alignment:
Q  88 aaatctgatggttgtgatgtgttta-tgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    |||||||||||||||||  |||||| |||| |||||||||| ||||||||||||||  ||||||||    
T  28698578 aaatctgatggttgtgaaatgtttaatgcagggtgcataagaaaatggcttatgcataataacttt 28698643  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 129
Target Start/End: Complemental strand, 7614133 - 7614094
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataagga 129  Q
    ||||||||||||||| ||||||||||| ||||||||||||    
T  7614133 atctgatggttgtgaagtgtttatgcatggtgcataagga 7614094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 157
Target Start/End: Complemental strand, 18022099 - 18022052
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||| ||||||||||| || | |||||||||||||||||||||||    
T  18022099 ttatgcagggtgcataagggaaggacttatgcaccataacttttgcca 18022052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 15181856 - 15181790
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||| |||||| ||||||||||| ||||||||||||||    |||||||  ||||||||||||    
T  15181856 atctgatgcttgtgaagtgtttatgcagggtgcataaggaaacatattatgcataataacttttgcc 15181790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 96 - 142
Target Start/End: Complemental strand, 30652009 - 30651963
Alignment:
Q  96 tggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 142  Q
    ||||||||| ||||||||||| ||||||||||||||| | |||||||    
T  30652009 tggttgtgaagtgtttatgcagggtgcataaggaaatagattatgca 30651963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Original strand, 15259874 - 15259903
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaac 30  Q
    ||||||||||||||||||||||||||||||    
T  15259874 aatccttatgcaccgtgcataaatcccaac 15259903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 144; Significance: 2e-75; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 9595891 - 9596046
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  9595891 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttattcaaaataaaagaaatctgatggtt 9595990  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9595991 gtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 9596046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 144; E-Value: 2e-75
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 26662449 - 26662604
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  26662449 aatccttatgcactgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 26662548  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||    
T  26662549 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcacaataacttttgcc 26662604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 157
Target Start/End: Complemental strand, 9106422 - 9106266
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  9106422 aatccttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatgaaagaaatctgatggtt 9106323  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    || |||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  9106322 gtaatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcca 9106266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 2941837 - 2941992
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  2941837 aatccttatgcaccgtgcataaatcccaacataattgctttctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 2941936  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||| |||||||||||  ||||||||||||||||||||||    
T  2941937 gtgatgtgtttatgcacggtacataaggaaataacttatgcaccataacttttgcc 2941992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30947822 - 30947977
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||| ||||| ||    
T  30947822 aatccttatgcaccgtgcataaatcccaacataattgcttcctacaccccaaaagtgagccaaaaccatttttgttcaaaatgaaagaaatttgatgatt 30947921  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  30947922 gtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 30947977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 134; E-Value: 2e-69
Query Start/End: Original strand, 1 - 158
Target Start/End: Original strand, 3475318 - 3475475
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| | |||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  3475318 aatccttatgcaccgtgcataaatcccaacataattgcttcctacatctccaaagtgagccaaaatcatttttgttcaaaataaaagaaatctgatggtt 3475417  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccag 158  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||    
T  3475418 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgccag 3475475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 19284826 - 19284671
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |||||||| |||||||||||||||||    
T  19284826 aatccttatgcaccgtgcataaatcccaacataattgcttcctacatccccaaagtgagtcaaaaccatttttattcaaaataaaagaaatctgatggtt 19284727  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  19284726 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 19284671  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 3 - 156
Target Start/End: Complemental strand, 47335185 - 47335032
Alignment:
Q  3 tccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgt 102  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||||| |||||||| |||||||||||||||||||    
T  47335185 tccttatgcaccgtgcataaatcccaacataattgtttcctacacccccaaagtgagccaaaatcatttttattcaaaataaaagaaatctgatggttgt 47335086  T
Q  103 gatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  47335085 gatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 47335032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 6097595 - 6097750
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||||||| ||||||||||||| |||    
T  6097595 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccttaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatagtt 6097694  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
     |||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  6097695 atgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 6097750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 4 - 155
Target Start/End: Original strand, 33413927 - 33414078
Alignment:
Q  4 ccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtg 103  Q
    |||||||||||||||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||| || ||||| ||||||||||||||||||||    
T  33413927 ccttatgcaccgtgcataaatcccaatataattgcttcctacaccctcaaagtgagccaaaaccatttttatttaaaataaaagaaatctgatggttgtg 33414026  T
Q  104 atgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgc 155  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  33414027 atgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgc 33414078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 128; E-Value: 6e-66
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 46237669 - 46237824
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  46237669 aatccttatacaccgtgcataaatcccaacataattgcttcatactcccccaaagtgagccaaaaccatttttattcaaaataaaagaaatctgatggtt 46237768  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  46237769 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46237824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 54379317 - 54379163
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||| |||||||| ||||||||    
T  54379317 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaatgtgagccaaa-ccatttttgttcaaaataaaagaaatatgatggtt 54379219  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  54379218 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 54379163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 116; E-Value: 9e-59
Query Start/End: Original strand, 1 - 152
Target Start/End: Complemental strand, 26960781 - 26960630
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| |||||| ||    
T  26960781 aatctttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaacctgatgatt 26960682  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    || |||||||||||||||||||||||||||||  ||||| ||||||||||||    
T  26960681 gtaatgtgtttatgcacggtgcataaggaaataacttatacaccataacttt 26960630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 10986507 - 10986352
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||| || ||||||||| |||||||||||||||| ||||| |||||||||||||||||    
T  10986507 aatccttatgcaccgtgcataaatctcaacataattgcttcctacatcctcaaagtgagtcaaaaccatttttgtttaaaataaaagaaatctgatggtt 10986408  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
     |||||||||||||||||||||||||||||||  ||||| || |||||||||||||    
T  10986407 atgatgtgtttatgcacggtgcataaggaaataacttatacatcataacttttgcc 10986352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 50755217 - 50755163
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  50755217 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 50755163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 51846785 - 51846843
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  51846785 atggttgtgaagtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 51846843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 5 - 55
Target Start/End: Original strand, 19384404 - 19384454
Alignment:
Q  5 cttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19384404 cttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 19384454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 87 - 158
Target Start/End: Original strand, 51681999 - 51682070
Alignment:
Q  87 gaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccag 158  Q
    ||||||||||||||| || ||||||||||| |||||||||||||||| ||||||||  ||||||||||||||    
T  51681999 gaaatctgatggttgcgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttgccag 51682070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 34563352 - 34563410
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    ||||||||||  ||||||||||||||||||||| |||||||||||||||||||||||||    
T  34563352 atggttgtgaaatgtttatgcacggtgcataagaaaatggcttatgcaccataactttt 34563410  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 41192355 - 41192413
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| ||||||||| |||||||||||||||||| |||||||||||||||||||    
T  41192355 atggttgtgaagtgtttatgtacggtgcataaggaaatgacttatgcaccataactttt 41192413  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 19385313 - 19385380
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  19385313 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 19385380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 47728456 - 47728388
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||| ||||||||  ||||||||||||    
T  47728456 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttttgcc 47728388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 51362436 - 51362503
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  51362436 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 51362503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 53595036 - 53594972
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| ||||||||||| |||||||||| ||||||||||||||  ||||||||    
T  53595036 aaatctgatggttgtgaagtgtttatgcagggtgcataagaaaatggcttatgcataataacttt 53594972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 44; E-Value: 8e-16
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 31853207 - 31853164
Alignment:
Q  5 cttatgcaccgtgcataaatcccaacataattgcttcctacacc 48  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  31853207 cttatgcaccgtgcataaatcccaacataattgcttcctacacc 31853164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 51361542 - 51361596
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||| |||||||| ||||||||||||||||||||||| ||||    
T  51361542 aatccttatgcaccgtgtataaatcctaacataattgcttcctacacccctaaag 51361596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 97 - 156
Target Start/End: Complemental strand, 23755344 - 23755285
Alignment:
Q  97 ggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||||    
T  23755344 ggttgtgaagtgtttatgcagggtgcataaggaaatgtcttatgcataataacttttgcc 23755285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 7045300 - 7045365
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| |||||||| |||||||||||| ||| |  ||||||||||||||||||||||    
T  7045300 atctgatggttgtgaagtgtttatacacggtgcataa-gaatttccttatgcaccataacttttgcc 7045365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 90 - 154
Target Start/End: Complemental strand, 50754071 - 50754008
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  |||||| |||||||||||||    
T  50754071 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgtaccataacttttg 50754008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 23699390 - 23699327
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||  ||||||||||||    
T  23699390 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttttgcc 23699327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 23717845 - 23717782
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||  ||||||||||||    
T  23717845 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttttgcc 23717782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 23736301 - 23736238
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||| ||||||||||| |||| ||||| ||||| ||||||||  ||||||||||||    
T  23736301 tgatggttgtgaagtgtttatgcagggtgtataagaaaatgtcttatgcataataacttttgcc 23736238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 28299952 - 28300019
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||| ||||||| ||||||||||| ||| |||||||||||| ||||||||  |||| ||||||||    
T  28299952 atctgatagttgtgaagtgtttatgcatggtacataaggaaatgacttatgcataataatttttgcca 28300019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 99 - 154
Target Start/End: Complemental strand, 32233048 - 32232993
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  32233048 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttg 32232993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 90 - 129
Target Start/End: Original strand, 52987650 - 52987689
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataagga 129  Q
    ||||||||||||||| ||||||||||||||||||||||||    
T  52987650 atctgatggttgtgaagtgtttatgcacggtgcataagga 52987689  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 8718166 - 8718101
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| || |||||| ||||||||||||| | |  ||||||||||||||||||||||    
T  8718166 atctgatggttgtgaagtatttatgtacggtgcataagg-atttccttatgcaccataacttttgcc 8718101  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 9070053 - 9069988
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| || |||||| ||||||||||||| | |  ||||||||||||||||||||||    
T  9070053 atctgatggttgtgaagtatttatgtacggtgcataagg-atttccttatgcaccataacttttgcc 9069988  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 37319458 - 37319522
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||  ||||| ||||||||||| |||||||||| ||||| ||||||||  ||||||||    
T  37319458 aaatctgatgaatgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttt 37319522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 12 - 55
Target Start/End: Original strand, 7044387 - 7044430
Alignment:
Q  12 accgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||| | |||||||||||||| |||||||||||||    
T  7044387 accgtgcataaattctaacataattgcttcttacacccccaaag 7044430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 110 - 157
Target Start/End: Original strand, 9180111 - 9180158
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||| ||||||||||| || | |||||||||||||||||||||||    
T  9180111 ttatgcagggtgcataagggaaggacttatgcaccataacttttgcca 9180158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 152
Target Start/End: Original strand, 16277417 - 16277475
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    |||||||||||| ||||||||||||||||||||| | | |  ||||||||||||||||||    
T  16277417 tgatggttgtgaagtgtttatgcacggtgcataaag-atttccttatgcaccataacttt 16277475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 8054778 - 8054713
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||    ||||||| ||||||||||  | |||||||||||||||||||||||||    
T  8054778 atctgatggttgtgattaacttatgcatggtgcataagtta-tggcttatgcaccataacttttgcc 8054713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 132
Target Start/End: Complemental strand, 39099262 - 39099220
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaat 132  Q
    |||||||||||||||  | ||||||||||||||||||||||||    
T  39099262 atctgatggttgtgaaatatttatgcacggtgcataaggaaat 39099220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 8719162 - 8719133
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaac 30  Q
    ||||||||||||||||||||||||||||||    
T  8719162 aatccttatgcaccgtgcataaatcccaac 8719133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 1 - 30
Target Start/End: Complemental strand, 9071049 - 9071020
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaac 30  Q
    ||||||||||||||||||||||||||||||    
T  9071049 aatccttatgcaccgtgcataaatcccaac 9071020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 25 - 54
Target Start/End: Complemental strand, 47729163 - 47729134
Alignment:
Q  25 cccaacataattgcttcctacacccccaaa 54  Q
    ||||||||||||||||||||||||||||||    
T  47729163 cccaacataattgcttcctacacccccaaa 47729134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 23700084 - 23700056
Alignment:
Q  25 cccaacataattgcttcctacacccccaa 53  Q
    |||||||||||||||||||||||||||||    
T  23700084 cccaacataattgcttcctacacccccaa 23700056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 23718539 - 23718511
Alignment:
Q  25 cccaacataattgcttcctacacccccaa 53  Q
    |||||||||||||||||||||||||||||    
T  23718539 cccaacataattgcttcctacacccccaa 23718511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 23736995 - 23736967
Alignment:
Q  25 cccaacataattgcttcctacacccccaa 53  Q
    |||||||||||||||||||||||||||||    
T  23736995 cccaacataattgcttcctacacccccaa 23736967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 141; Significance: 1e-73; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16933154 - 16933310
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc-caaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggt 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16933154 aatccttatgcaccgtgcataaatctcaacataattgcttcctacaccccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggt 16933253  T
Q  100 tgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16933254 tgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 16933310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 141; E-Value: 1e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 16938537 - 16938693
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccc-caaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggt 99  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||    
T  16938537 aatccttatgcaccgtgcataaatctcaacataattgcttcctacaccccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggt 16938636  T
Q  100 tgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  16938637 tgtgatgtgtttatgcacggtgcataaggaaatgacttatgcaccataacttttgcc 16938693  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 30884133 - 30884288
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  30884133 aatccttatgcaccgtgcataaatcctaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 30884232  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  30884233 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 30884288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 46358675 - 46358520
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||    
T  46358675 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaaaaaatctgatggtt 46358576  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  46358575 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 46358520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 763852 - 763697
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| |||||||||| |||||||||||||||||    
T  763852 aatccttatgcactgtgcataaatcccaacataattgcttcctacacccccaaagcgagccaaaaccatttatgttcaaaataaaagaaatctgatggtt 763753  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||| |||||||||||||||||||||||||||||||||||||||||||||||||||    
T  763752 gtgacgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 763697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 133; E-Value: 6e-69
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 47340302 - 47340146
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  47340302 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 47340203  T
Q  101 gtgatgtg-tttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||| ||||||||||||||||||| ||||  ||||||||||||||||||||||    
T  47340202 gtgatgtgttttatgcacggtgcataagaaaataacttatgcaccataacttttgcc 47340146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 31660224 - 31660069
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||||||||||||    
T  31660224 aatccttatgcaccgtgcataaatctcaacataattgcttcctacacccccaaagtgaaccaaaaccatttttattcaaaataaaagaaatctgatggtt 31660125  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  31660124 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 31660069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 41911023 - 41911175
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||   | |||||||||||||    
T  41911023 aatccttatgcaccgtgcataaatcccaacataattgcttcctacaccctcaaagtgaaccaaaaccatttttgttcaaaat---aaaaatctgatggtt 41911119  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  41911120 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 41911175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 121; E-Value: 9e-62
Query Start/End: Original strand, 1 - 141
Target Start/End: Complemental strand, 35737103 - 35736963
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||||||    
T  35737103 aatccttatgcaccgtgcataaatcccaacataattgcttcctacatccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatatgatggtt 35737004  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgc 141  Q
    ||||||||||||||||||||||||||||||||  |||||||    
T  35737003 gtgatgtgtttatgcacggtgcataaggaaataacttatgc 35736963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 74; E-Value: 1e-33
Query Start/End: Original strand, 67 - 156
Target Start/End: Original strand, 20000651 - 20000740
Alignment:
Q  67 catttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  20000651 catttttgttcaaagtgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataagtaaatgacttatgcaccataacttttgcc 20000740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 5757452 - 5757385
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||| |||||||||||||||||||||||||||| ||||||||  |||||||||||||    
T  5757452 atctgatggttgtgaagtgtttatgcacggtgcataaggaaatgtcttatgcataataacttttgcca 5757385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 46572593 - 46572647
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  46572593 aatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaag 46572647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 48692075 - 48692021
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  48692075 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaaag 48692021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 88 - 153
Target Start/End: Original strand, 11732645 - 11732710
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||| |||||||||| |||||||||||| ||||||||| |||||||||||||||||||||||||    
T  11732645 aaatctaatggttgtgaagtgtttatgcacagtgcataagaaaatggcttatgcaccataactttt 11732710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 88 - 152
Target Start/End: Complemental strand, 34875557 - 34875493
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||||||||  ||||||||    
T  34875557 aaatctgatggttgtgaagtgtttatgcagggtgcataaggaaatggcttatgcataataacttt 34875493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 95 - 153
Target Start/End: Complemental strand, 24359932 - 24359874
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| ||||| |||||||||||||||||||||| |||||||||||||||||||    
T  24359932 atggttgtgaagtgttgatgcacggtgcataaggaaatgacttatgcaccataactttt 24359874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 44141249 - 44141317
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||| ||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||||    
T  44141249 aaatcagatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcatgataacttttgcc 44141317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 15973879 - 15973933
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||| |||||||||||||||||| |||||||||||||||| ||||    
T  15973879 aatccttatgcaccatgcataaatcccaacatagttgcttcctacacccctaaag 15973933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 32685863 - 32685917
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||| ||||||||||||||| ||||||||||||||||||||||| |||||    
T  32685863 aatccttatacaccgtgcataaatctcaacataattgcttcctacaccctcaaag 32685917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 15974934 - 15975002
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||| |||||||||||| ||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  15974934 aaatatgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcca 15975002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 39007647 - 39007715
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||| ||||||    
T  39007647 aaatatgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacctttgcc 39007715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 30428938 - 30428872
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||  |||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  30428938 atctgatggttgtgaaatgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcca 30428872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 46024092 - 46024026
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||| |||||||||||||||||||    
T  46024092 atctgatggttgtgaagtgtttatgcacggtgcataagg-attttcttgtgcaccataacttttgcca 46024026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 25778904 - 25778837
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||| ||| |||||||| |||||||| ||| |  ||||||||||||||||||||||    
T  25778904 aaatctgatggttgtgaagtgcttatgcacagtgcataa-gaattttcttatgcaccataacttttgcc 25778837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 5 - 48
Target Start/End: Complemental strand, 48306373 - 48306331
Alignment:
Q  5 cttatgcaccgtgcataaatcccaacataattgcttcctacacc 48  Q
    |||||||||||||||||||||||||||||||| |||||||||||    
T  48306373 cttatgcaccgtgcataaatcccaacataatt-cttcctacacc 48306331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 156
Target Start/End: Original strand, 6797394 - 6797451
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| ||||||||||| | |||||||||||||| ||||||||  ||||||||||||    
T  6797394 ttgtgaagtgtttatgcaggatgcataaggaaatgacttatgcataataacttttgcc 6797451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 106 - 157
Target Start/End: Complemental strand, 48305285 - 48305236
Alignment:
Q  106 gtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||||||||||||    |||||||||||||||||||||||    
T  48305285 gtgtttatgcacggtgcataaggaa--tccttatgcaccataacttttgcca 48305236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 10556014 - 10555948
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||| |  ||||| | |||||||||| ||||  |||||||||||||||||||||||    
T  10556014 atctgatggttgtgatttccttatgtatggtgcataagcaaatc-cttatgcaccataacttttgcca 10555948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 93 - 156
Target Start/End: Complemental strand, 48690957 - 48690895
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||  |||||||||||||||||||||| | |   |||||||||||||||||||||    
T  48690957 tgatggttgtgaactgtttatgcacggtgcataagg-atttctttatgcaccataacttttgcc 48690895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 27335629 - 27335694
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| ||||||||||| |||||||||| ||||| |||||  |  ||||||||||||    
T  27335629 atctgatggttgtgaagtgtttatgca-ggtgcataagaaaatgacttatttataataacttttgcc 27335694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 1 - 31
Target Start/End: Original strand, 34228624 - 34228654
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaaca 31  Q
    |||||||||||||||||||||||||||||||    
T  34228624 aatccttatgcaccgtgcataaatcccaaca 34228654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 93 - 154
Target Start/End: Original strand, 46346719 - 46346780
Alignment:
Q  93 tgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    |||||||||||| |||||||| || | |||||||| ||||| ||||||||  ||||||||||    
T  46346719 tgatggttgtgaagtgtttatacaggatgcataagaaaatgacttatgcataataacttttg 46346780  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 46025041 - 46025013
Alignment:
Q  25 cccaacataattgcttcctacacccccaa 53  Q
    |||||||||||||||||||||||||||||    
T  46025041 cccaacataattgcttcctacacccccaa 46025013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 46573500 - 46573563
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| ||||||||  |||||||||||| ||    |||||||| |||||||||||||    
T  46573500 atctgatggttgtgaagtgtttatatacggtgcataagaaa---ccttatgcatcataacttttgcc 46573563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0074 (Bit Score: 140; Significance: 4e-73; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 24429 - 24274
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| | ||||||    
T  24429 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgaaccaaaaccatttttgttcaaaatcaaagaaatttaatggtt 24330  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||    
T  24329 gtgatgtgtttatgcacggtacataaggaaatggcttatgcaccataacttttgcc 24274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 140; Significance: 4e-73; HSPs: 35)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Original strand, 7487165 - 7487320
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  7487165 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacctccaaagtgagccaaaaccatttttattcaaaataaaagaaatctgatggtt 7487264  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  7487265 gtgatgtgtttatgcacggtgcataaggaaatagcttatgcaccataacttttgcc 7487320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8149986 - 8149831
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  8149986 aatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaaaataaaagaaatctgatggtt 8149887  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8149886 gtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttgcc 8149831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 140; E-Value: 4e-73
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 8154610 - 8154455
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  8154610 aatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaatcatttttgttcaaaataaaagaaatctgatggtt 8154511  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||||| |||||||||||||||||||||||||||||||||||||    
T  8154510 gtgatgtgtttatgcacgatgcataaggaaatggcttatgcaccataacttttgcc 8154455  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 5 - 156
Target Start/End: Original strand, 15016481 - 15016632
Alignment:
Q  5 cttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtga 104  Q
    ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  15016481 cttatgcaccgtgcataaatctcaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggttgtga 15016580  T
Q  105 tgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  15016581 tgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 15016632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 136; E-Value: 1e-70
Query Start/End: Original strand, 1 - 156
Target Start/End: Complemental strand, 39355190 - 39355035
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||| |||||||||||||||||    
T  39355190 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagcgagccaaaactatttttgttcaaaataaaagaaatctgatggtt 39355091  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  39355090 gtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 39355035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 130; E-Value: 4e-67
Query Start/End: Original strand, 1 - 154
Target Start/End: Complemental strand, 34464866 - 34464713
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||||||    
T  34464866 aatccttatgcaccgtgcataaatccaaacataattgcttcctacacccctaaagtgagccaaaaccatttttgttcaaaataaaagaaatctgatggtt 34464767  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    ||||| ||||||||||||||||||||||||||  ||||||||||||||||||||    
T  34464766 gtgatatgtttatgcacggtgcataaggaaataacttatgcaccataacttttg 34464713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 125; E-Value: 4e-64
Query Start/End: Original strand, 1 - 157
Target Start/End: Original strand, 1292090 - 1292246
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggtt 100  Q
    |||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||    
T  1292090 aatccttatgcaccgtgcataaattccaacataattgcttcctacacccccaaaatgagcaaaaaccatttttgttcaaaataaaagaaatctgatggtt 1292189  T
Q  101 gtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||| |||||||||||| ||||  |||||||||||||||||||||||    
T  1292190 gtgatgtgtttatgtacggtgcataagaaaataacttatgcaccataacttttgcca 1292246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 119; E-Value: 1e-60
Query Start/End: Original strand, 15 - 157
Target Start/End: Complemental strand, 9143726 - 9143584
Alignment:
Q  15 gtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttgtgatgtgtttatg 114  Q
    |||||||||| |||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||| ||||||||||||||||    
T  9143726 gtgcataaattccaacataattgcttcctacacccccaaagtgagtcaaaaccatttttgttcaaaataaaagaaatctgatgattgtgatgtgtttatg 9143627  T
Q  115 cacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  9143626 cacggtgcataaggaaataacttatgcaccataacttttgcca 9143584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 77 - 156
Target Start/End: Complemental strand, 2263652 - 2263573
Alignment:
Q  77 caaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| ||| ||||  ||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  2263652 caaaatgaaataaatgcgatggttgtgaagtgtttatgcacggtgcataaagaaatggcttatgcaccataacttttgcc 2263573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 18297187 - 18297241
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  18297187 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 18297241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 95 - 156
Target Start/End: Complemental strand, 18762928 - 18762867
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||    
T  18762928 atggttgtgatgtgtttatgcacggtgcataaggaaataacttatgcaccataacttttgcc 18762867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 5 - 65
Target Start/End: Complemental strand, 18762988 - 18762928
Alignment:
Q  5 cttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaa 65  Q
    |||||||||||| ||||||||||||||||||||||||||||||  ||||||||||||||||    
T  18762988 cttatgcaccgtacataaatcccaacataattgcttcctacacttccaaagtgagccaaaa 18762928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 25194016 - 25193962
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  25194016 aatccttatgcaccgtgcataaatcccaatataattgtttcctacacccccaaag 25193962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 88 - 154
Target Start/End: Complemental strand, 5098784 - 5098718
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttg 154  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||||  ||||||||||    
T  5098784 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataacttttg 5098718  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 18298111 - 18298176
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  18298111 atctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 18298176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 95 - 153
Target Start/End: Original strand, 41346045 - 41346103
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    |||||||||| ||||||||  |||||||||||| |||||||||||||||||||||||||    
T  41346045 atggttgtgaagtgtttatatacggtgcataagaaaatggcttatgcaccataactttt 41346103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 88 - 156
Target Start/End: Complemental strand, 25995354 - 25995286
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||| || ||||||||  ||||||||||||||| ||||||||  ||||||||||||    
T  25995354 aaatctgatggttgtgaagtatttatgcagagtgcataaggaaatgtcttatgcataataacttttgcc 25995286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 20709839 - 20709773
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||| |||||||||||||||| |||||| | |  |||||||||||||||||||||||    
T  20709839 atctgatggttgtgaagtgtttatgcacggtggataagg-atttccttatgcaccataacttttgcca 20709773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 149
Target Start/End: Complemental strand, 21155480 - 21155441
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataac 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  21155480 ttatgcacggtgcataaggaaatggcttatgcaccataac 21155441  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 27974291 - 27974330
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataac 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  27974291 ttatgcacggtgcataaggaaatggcttatgcaccataac 27974330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 110 - 149
Target Start/End: Original strand, 28060820 - 28060859
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataac 149  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  28060820 ttatgcacggtgcataaggaaatggcttatgcaccataac 28060859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 90 - 156
Target Start/End: Complemental strand, 25192957 - 25192892
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||| |||||||||| ||||||||||||||||||||||| | |  ||||||||||||||||||||||    
T  25192957 atctaatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcc 25192892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 36636935 - 36637004
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||| ||||||||| | ||| |||||| ||||| ||||||||  |||||||||||||    
T  36636935 aaatctgatggttgtgaagtgtttatgtagggtacataagaaaatgacttatgcataataacttttgcca 36637004  T

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Target: chr2; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 7 - 55
Target Start/End: Complemental strand, 2264673 - 2264625
Alignment:
Q  7 tatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    ||||||| || ||||||| ||||||||||||||||||||||||||||||    
T  2264673 tatgcacagtacataaattccaacataattgcttcctacacccccaaag 2264625  T

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Target: chr2; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 88 - 140
Target Start/End: Complemental strand, 39548110 - 39548058
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatg 140  Q
    |||| |||||||||||| ||||||||||| |||||||||||||||| ||||||    
T  39548110 aaatttgatggttgtgaagtgtttatgcagggtgcataaggaaatgacttatg 39548058  T

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Target: chr2; HSP #26
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 13 - 48
Target Start/End: Original strand, 4578590 - 4578625
Alignment:
Q  13 ccgtgcataaatcccaacataattgcttcctacacc 48  Q
    ||||||||||||||||||||||||||||||||||||    
T  4578590 ccgtgcataaatcccaacataattgcttcctacacc 4578625  T

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Target: chr2; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 96 - 151
Target Start/End: Original strand, 40853685 - 40853740
Alignment:
Q  96 tggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactt 151  Q
    ||||||||| ||||||||||| | |||||||||||||||||||||||  |||||||    
T  40853685 tggttgtgaagtgtttatgcaggatgcataaggaaatggcttatgcataataactt 40853740  T

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Target: chr2; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 4281788 - 4281854
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||| |||||||| ||  || |||||||||||| ||||||||  ||||||||||||    
T  4281788 atctgatggttgtgaagtgtttatacagagtacataaggaaatgtcttatgcataataacttttgcc 4281854  T

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Target: chr2; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 88 - 142
Target Start/End: Original strand, 16142073 - 16142127
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgca 142  Q
    |||||| |||||||||| |||||||||||  ||||||||||||||||||| ||||    
T  16142073 aaatctaatggttgtgaagtgtttatgcagcgtgcataaggaaatggcttgtgca 16142127  T

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Target: chr2; HSP #30
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 14551319 - 14551382
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgc 155  Q
    ||||||||||||||| |||||||||||| |||||||| ||| |  |||||||||||||||||||||    
T  14551319 atctgatggttgtgaagtgtttatgcac-gtgcataa-gaatttccttatgcaccataacttttgc 14551382  T

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Target: chr2; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 152
Target Start/End: Original strand, 13081858 - 13081922
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttt 152  Q
    ||||| ||||||||||| ||||||||| | ||||||||| |||||| ||||||||  ||||||||    
T  13081858 aaatcagatggttgtgaagtgtttatgtagggtgcataatgaaatgacttatgcataataacttt 13081922  T

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Target: chr2; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 15 - 50
Target Start/End: Original strand, 14550465 - 14550500
Alignment:
Q  15 gtgcataaatcccaacataattgcttcctacacccc 50  Q
    ||||||||||||||||| ||||||||||||||||||    
T  14550465 gtgcataaatcccaacaaaattgcttcctacacccc 14550500  T

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Target: chr2; HSP #33
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 110 - 156
Target Start/End: Complemental strand, 3925624 - 3925578
Alignment:
Q  110 ttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||| ||||||||||| || | ||||||||||||||||||||||    
T  3925624 ttatgcagggtgcataagggaaggacttatgcaccataacttttgcc 3925578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 44352679 - 44352744
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||    ||||||| ||||||||||  | |||||||||||||||||||||||||    
T  44352679 atctgatggttgtgattaacttatgcatggtgcataagtta-tggcttatgcaccataacttttgcc 44352744  T

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Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 99 - 151
Target Start/End: Original strand, 24024633 - 24024685
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactt 151  Q
    |||||| ||||||||||| ||||||||||||| || ||||||||  |||||||    
T  24024633 ttgtgaagtgtttatgcatggtgcataaggaattgacttatgcataataactt 24024685  T

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Target: scaffold0581 (Bit Score: 135; Significance: 4e-70; HSPs: 1)
Name: scaffold0581
Description:

Target: scaffold0581; HSP #1
Raw Score: 135; E-Value: 4e-70
Query Start/End: Original strand, 2 - 156
Target Start/End: Original strand, 8333 - 8487
Alignment:
Q  2 atccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgttcaaaatcaaagaaatctgatggttg 101  Q
    ||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||| ||||||||||||||| ||||||||||||||||||    
T  8333 atccttatgcaccgtgcataaatcccaacataattgctttctacaccctcaaagtgagccaaaactatttttgttcaaaataaaagaaatctgatggttg 8432  T
Q  102 tgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||||||||||| ||||||||||||||||||||||||||||||||||||||    
T  8433 tgatgtgtttatgcacagtgcataaggaaatggcttatgcaccataacttttgcc 8487  T

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Target: scaffold0571 (Bit Score: 78; Significance: 4e-36; HSPs: 2)
Name: scaffold0571
Description:

Target: scaffold0571; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 75 - 156
Target Start/End: Original strand, 661 - 742
Alignment:
Q  75 ttcaaaatcaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  661 ttcaaaatgaaagaaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 742  T

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Target: scaffold0571; HSP #2
Raw Score: 72; E-Value: 2e-32
Query Start/End: Original strand, 1 - 76
Target Start/End: Original strand, 564 - 639
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 76  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||    
T  564 aatccttatgcaccgtgcataaatcccaatataattgcttcctacacccccaaagtgagccaaaaccatttttgtt 639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0338 (Bit Score: 51; Significance: 5e-20; HSPs: 1)
Name: scaffold0338
Description:

Target: scaffold0338; HSP #1
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 1 - 55
Target Start/End: Complemental strand, 6538 - 6484
Alignment:
Q  1 aatccttatgcaccgtgcataaatcccaacataattgcttcctacacccccaaag 55  Q
    |||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  6538 aatccttatgcaccatgcataaatcccaacataattgcttcctacacccccaaag 6484  T

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Target: scaffold0238 (Bit Score: 46; Significance: 5e-17; HSPs: 1)
Name: scaffold0238
Description:

Target: scaffold0238; HSP #1
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 88 - 157
Target Start/End: Original strand, 25230 - 25298
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||||| ||||||||||||||||||||||| | |  |||||||||||||||||||||||    
T  25230 aaatctgatggttgtgaagtgtttatgcacggtgcataagg-atttccttatgcaccataacttttgcca 25298  T

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Target: scaffold0097 (Bit Score: 40; Significance: 0.0000000000002; HSPs: 1)
Name: scaffold0097
Description:

Target: scaffold0097; HSP #1
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 90 - 157
Target Start/End: Complemental strand, 13678 - 13612
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||||||| |||||||||||||||| |||||| | |  |||||||||||||||||||||||    
T  13678 atctgatggttgtgaagtgtttatgcacggtggataagg-atttccttatgcaccataacttttgcca 13612  T

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Target: scaffold0544 (Bit Score: 38; Significance: 0.000000000003; HSPs: 1)
Name: scaffold0544
Description:

Target: scaffold0544; HSP #1
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 90 - 155
Target Start/End: Original strand, 10675 - 10739
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgc 155  Q
    ||||||||||||||| |||||||||||||||| |||||| | |  |||||||||||||||||||||    
T  10675 atctgatggttgtgaagtgtttatgcacggtgtataagg-atttccttatgcaccataacttttgc 10739  T

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Target: scaffold0558 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0558
Description:

Target: scaffold0558; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 2508 - 2448
Alignment:
Q  94 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgc 155  Q
    |||||||||||| |  |||||||||||||||||||||||  ||||| |||||||||||||||    
T  2508 gatggttgtgatttccttatgcacggtgcataaggaaat-ccttatacaccataacttttgc 2448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0558; HSP #2
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 94 - 155
Target Start/End: Complemental strand, 5920 - 5860
Alignment:
Q  94 gatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgc 155  Q
    |||||||||||| |  |||||||||||||||||||||||  ||||| |||||||||||||||    
T  5920 gatggttgtgatttccttatgcacggtgcataaggaaat-ccttatacaccataacttttgc 5860  T

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Target: scaffold0460 (Bit Score: 34; Significance: 0.0000000007; HSPs: 1)
Name: scaffold0460
Description:

Target: scaffold0460; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 1661 - 1604
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| ||||||||||| |||||||||||||||| ||||||||  |||| |||||||    
T  1661 ttgtgaagtgtttatgcagggtgcataaggaaatgacttatgcataataatttttgcc 1604  T

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Target: scaffold0006 (Bit Score: 34; Significance: 0.0000000007; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 209383 - 209326
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| ||||||||||| |||||||||| ||||| ||||||||  ||||||||||||    
T  209383 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataacttttgcc 209326  T

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Target: scaffold0006; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 99 - 156
Target Start/End: Complemental strand, 171562 - 171505
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||||| |||||||| || |||||||||||||||| ||||||||  |||| |||||||    
T  171562 ttgtgaagtgtttatacagggtgcataaggaaatgacttatgcataataatttttgcc 171505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0189 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0189
Description:

Target: scaffold0189; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 88 - 156
Target Start/End: Original strand, 11188 - 11255
Alignment:
Q  88 aaatctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    |||| |||||||||||| ||| |||||||| |||||||||| | |  ||||||||||||||||||||||    
T  11188 aaatatgatggttgtgaagtgcttatgcacagtgcataagg-atttccttatgcaccataacttttgcc 11255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0069 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0069
Description:

Target: scaffold0069; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 99 - 159
Target Start/End: Complemental strand, 51416 - 51356
Alignment:
Q  99 ttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgccagt 159  Q
    |||||| ||||||||||| |||||||||| ||||| ||||||||  |||| ||||||||||    
T  51416 ttgtgaagtgtttatgcagggtgcataagaaaatgacttatgcataataatttttgccagt 51356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0337 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0337
Description:

Target: scaffold0337; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 153
Target Start/End: Complemental strand, 7082 - 7020
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataactttt 153  Q
    ||||||||||||||| |||||||||||||||| |||| ||  | | ||||||||||||||||||    
T  7082 atctgatggttgtgaagtgtttatgcacggtgtataaagatttcg-ttatgcaccataactttt 7020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0050 (Bit Score: 32; Significance: 0.00000001; HSPs: 1)
Name: scaffold0050
Description:

Target: scaffold0050; HSP #1
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 90 - 157
Target Start/End: Original strand, 18980 - 19046
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    |||||||||||||||| |  ||||| | |||||||||| ||||  |||||||||||||||||||||||    
T  18980 atctgatggttgtgatttccttatgtatggtgcataagcaaatc-cttatgcaccataacttttgcca 19046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 31; Significance: 0.00000005; HSPs: 2)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 130466 - 130531
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||    ||||||| ||||||||||  | |||||||||||||||||||||||||    
T  130466 atctgatggttgtgattaacttatgcatggtgcataagtta-tggcttatgcaccataacttttgcc 130531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 90 - 156
Target Start/End: Original strand, 134560 - 134625
Alignment:
Q  90 atctgatggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||||||||    ||||||| ||||||||||  | |||||||||||||||||||||||||    
T  134560 atctgatggttgtgattaacttatgcatggtgcataagtta-tggcttatgcaccataacttttgcc 134625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0019 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0019
Description:

Target: scaffold0019; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 95 - 157
Target Start/End: Complemental strand, 164118 - 164057
Alignment:
Q  95 atggttgtgatgtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcca 157  Q
    ||||||||||| || ||||| | |||||||||||||||  ||||||||||||| |||||||||    
T  164118 atggttgtgatttgcttatgtatggtgcataaggaaat-ccttatgcaccatagcttttgcca 164057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 31; Significance: 0.00000005; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 106 - 156
Target Start/End: Complemental strand, 450252 - 450202
Alignment:
Q  106 gtgtttatgcacggtgcataaggaaatggcttatgcaccataacttttgcc 156  Q
    ||||||||||| |||| ||||||||||| ||||||||  ||||||||||||    
T  450252 gtgtttatgcaaggtgtataaggaaatgacttatgcataataacttttgcc 450202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0194 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 25 - 53
Target Start/End: Complemental strand, 28656 - 28628
Alignment:
Q  25 cccaacataattgcttcctacacccccaa 53  Q
    |||||||||||||||||||||||||||||    
T  28656 cccaacataattgcttcctacacccccaa 28628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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