View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4051_low_9 (Length: 436)
Name: NF4051_low_9
Description: NF4051
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4051_low_9 |
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Alignment Details
Target: chr8 (Bit Score: 302; Significance: 1e-170; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 302; E-Value: 1e-170
Query Start/End: Original strand, 1 - 404
Target Start/End: Original strand, 4359464 - 4359886
Alignment:
| Q |
1 |
ttaagagttaagaggttgtagttgaatctcacgtgagattgtgtagtctaaatgaaaatgtcacgtgactttaaaaaatcatggacgta----------- |
89 |
Q |
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| T |
4359464 |
ttaagagttaagaggttgtagttgaatctcacgtgagattgtgtagtttaaatgaaaatgtcacgtgactataaaaaatcatggacgtattgtaagaaaa |
4359563 |
T |
|
| Q |
90 |
---aaattaggtgcatgtattcctta--aa---tttttcctatggttctaaactaaattactcaattttttgtaactattgaagatgtatttttagttaa |
181 |
Q |
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|||||||||||||| ||||||| || ||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4359564 |
aaaaaattaggtgcatgcattcctttttaagtgttttttctatggttttaaactaaattactcaattttttgtaactattgaagatgtatttttagttaa |
4359663 |
T |
|
| Q |
182 |
aaatcttaggaaaagtcgatnnnnnnntgcacctatattttgtacattttataatactccttttttcaaatcgtgtaatgtaataatcaaaataaatata |
281 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4359664 |
aaatcttaggaaaagtcgataaaaaaatgcacctatattttgtacattttataatactccttttttcaaatcgtgtaatgtaataatcaaaataaatata |
4359763 |
T |
|
| Q |
282 |
gtttgaaaataattattatgatgttcaatgccatgcttataatgcaaacagaaaattaatctaaatgattgaaactaatatttcgacattccaatataca |
381 |
Q |
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||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4359764 |
gtttgaaaataattattatgaagttcaatgccatgcttataatgcaaacagaaaattaatctaaatgattgaaactaatatttcgacattccaatataca |
4359863 |
T |
|
| Q |
382 |
ataatgtaaataaaataaaatga |
404 |
Q |
| |
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||||||||||||||||||||||| |
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| T |
4359864 |
ataatgtaaataaaataaaatga |
4359886 |
T |
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