View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4053_high_16 (Length: 261)
Name: NF4053_high_16
Description: NF4053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4053_high_16 |
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Alignment Details
Target: chr5 (Bit Score: 249; Significance: 1e-138; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 249; E-Value: 1e-138
Query Start/End: Original strand, 1 - 249
Target Start/End: Original strand, 40983917 - 40984165
Alignment:
| Q |
1 |
ttaaaagtttgggctccaaaacttatgctaacatattattttattctttttatgaaggctgaagtggaagttgagagacttgaccagcttaaagcaagca |
100 |
Q |
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| T |
40983917 |
ttaaaagtttgggctccaaaacttatgctaacatattattttattctttttatgaaggctgaagtggaagttgagagacttgaccagcttaaagcaagca |
40984016 |
T |
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| Q |
101 |
ggatgaaggaaattgctttcaagaagcaatcagaacttgaagtgatatttgctaatgctcatatagaaatagattcggatgctgcaagagagaagattat |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40984017 |
ggatgaaggaaattgctttcaagaagcaatcagaacttgaagtgatatttgctaatgctcatatagaaatagattcggatgctgcaagagagaagattat |
40984116 |
T |
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| Q |
201 |
ggcattgattgattctggagacattgaaccaactgaattactggctgat |
249 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
40984117 |
ggcattgattgattctggagacattgaaccaactgaattactggctgat |
40984165 |
T |
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