View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4053_low_22 (Length: 234)
Name: NF4053_low_22
Description: NF4053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4053_low_22 |
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| [»] chr8 (1 HSPs) |
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Alignment Details
Target: chr8 (Bit Score: 176; Significance: 6e-95; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 176; E-Value: 6e-95
Query Start/End: Original strand, 31 - 234
Target Start/End: Original strand, 45050172 - 45050375
Alignment:
| Q |
31 |
ctgaacacaacatctctaaaattttagttttgnnnnnnnnctataatttatttgtttcatttatttttatcatagttcattaaaaaatttaagctgattt |
130 |
Q |
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| T |
45050172 |
ctgaacacaacatctctaaaattttagttttgaaaaaaaactataatttatttgtttcatttatttttatcatagttcattaaaaaatttaagctgattt |
45050271 |
T |
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| Q |
131 |
tcaaattcacaataataaatgtaatccttttaaaggtttttagaggtgcaacacatagaatttttctaatactactttcggtcgagcatgctaaaaaatc |
230 |
Q |
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| T |
45050272 |
tcaaattcacaataataaatgtaatccttttaaaggtttttagaggtgcaacacatagaatttttctaatactactttcggtcaagcatgctaaaaaatc |
45050371 |
T |
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| Q |
231 |
atca |
234 |
Q |
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|||| |
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| T |
45050372 |
atca |
45050375 |
T |
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