View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4053_low_23 (Length: 228)

Name: NF4053_low_23
Description: NF4053
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4053_low_23
NF4053_low_23
[»] chr4 (61 HSPs)
chr4 (49-228)||(12112492-12112669)
chr4 (1-46)||(30079876-30079921)
chr4 (2-46)||(5932154-5932198)
chr4 (1-53)||(22819672-22819724)
chr4 (1-46)||(624308-624353)
chr4 (1-46)||(9118860-9118905)
chr4 (1-46)||(23822241-23822286)
chr4 (1-46)||(48335584-48335629)
chr4 (1-53)||(13086045-13086097)
chr4 (1-53)||(14527667-14527719)
chr4 (2-46)||(21260328-21260372)
chr4 (1-53)||(39344976-39345028)
chr4 (1-53)||(47099045-47099097)
chr4 (1-53)||(51887686-51887738)
chr4 (2-53)||(20118804-20118855)
chr4 (2-49)||(36111393-36111440)
chr4 (1-44)||(41486139-41486182)
chr4 (8-46)||(6141781-6141819)
chr4 (1-47)||(35820200-35820246)
chr4 (1-46)||(14451423-14451468)
chr4 (1-46)||(28458373-28458418)
chr4 (1-46)||(30170016-30170061)
chr4 (1-46)||(46405970-46406015)
chr4 (1-46)||(47965769-47965814)
chr4 (1-53)||(13263393-13263445)
chr4 (1-53)||(21617206-21617258)
chr4 (1-41)||(26206973-26207013)
chr4 (2-46)||(33899323-33899367)
chr4 (2-46)||(37060347-37060391)
chr4 (10-53)||(3078913-3078956)
chr4 (39-78)||(5932179-5932218)
chr4 (2-53)||(18624217-18624268)
chr4 (39-78)||(30079856-30079895)
chr4 (10-53)||(37514137-37514180)
chr4 (10-53)||(42815427-42815470)
chr4 (2-45)||(42959302-42959345)
chr4 (10-53)||(47519726-47519768)
chr4 (3-46)||(50273065-50273108)
chr4 (1-44)||(53152317-53152360)
chr4 (2-48)||(2268505-2268551)
chr4 (2-44)||(6520829-6520871)
chr4 (1-34)||(6494889-6494922)
chr4 (1-34)||(28657437-28657470)
chr4 (1-46)||(38338918-38338963)
chr4 (1-34)||(39312612-39312645)
chr4 (3-44)||(40609642-40609683)
chr4 (39-89)||(41389894-41389946)
chr4 (1-34)||(43769753-43769786)
chr4 (9-53)||(2004193-2004237)
chr4 (2-34)||(5466493-5466525)
chr4 (2-46)||(10250513-10250557)
chr4 (1-33)||(12112670-12112702)
chr4 (39-88)||(14451391-14451442)
chr4 (2-34)||(17475364-17475396)
chr4 (38-78)||(21260308-21260348)
chr4 (2-46)||(24045274-24045318)
chr4 (2-46)||(26910231-26910275)
chr4 (1-49)||(31076081-31076129)
chr4 (2-46)||(39478464-39478508)
chr4 (2-46)||(43175013-43175057)
chr4 (2-46)||(50890071-50890115)
[»] chr7 (36 HSPs)
chr7 (1-53)||(43573539-43573591)
chr7 (1-46)||(39231724-39231769)
chr7 (1-53)||(13729749-13729801)
chr7 (1-51)||(28036769-28036819)
chr7 (39-89)||(39331982-39332034)
chr7 (1-53)||(11564916-11564968)
chr7 (1-53)||(16980320-16980372)
chr7 (1-49)||(29162972-29163020)
chr7 (1-41)||(40353299-40353339)
chr7 (2-46)||(41402537-41402581)
chr7 (1-53)||(46812901-46812953)
chr7 (1-44)||(38779740-38779783)
chr7 (2-44)||(27163656-27163698)
chr7 (1-46)||(13162949-13162994)
chr7 (1-46)||(19786075-19786120)
chr7 (1-46)||(21559828-21559873)
chr7 (1-46)||(29002638-29002683)
chr7 (10-53)||(1471296-1471339)
chr7 (39-78)||(19786101-19786140)
chr7 (2-53)||(42584825-42584876)
chr7 (1-34)||(3293171-3293204)
chr7 (1-34)||(4713615-4713648)
chr7 (1-46)||(21023113-21023158)
chr7 (1-46)||(32815198-32815243)
chr7 (1-46)||(37808760-37808805)
chr7 (1-46)||(39332015-39332060)
chr7 (1-46)||(41458626-41458671)
chr7 (1-46)||(44184555-44184600)
chr7 (1-34)||(47078247-47078280)
chr7 (2-46)||(13906455-13906499)
chr7 (1-53)||(16708183-16708235)
chr7 (1-53)||(17682419-17682471)
chr7 (2-34)||(26041874-26041906)
chr7 (2-46)||(30941415-30941459)
chr7 (1-53)||(33180706-33180758)
chr7 (2-34)||(35212953-35212985)
[»] chr5 (44 HSPs)
chr5 (1-53)||(43441761-43441813)
chr5 (1-46)||(15267814-15267859)
chr5 (1-46)||(35099001-35099046)
chr5 (2-46)||(16437562-16437606)
chr5 (1-44)||(18842317-18842360)
chr5 (1-46)||(2688982-2689027)
chr5 (1-46)||(8267816-8267861)
chr5 (1-46)||(21064222-21064267)
chr5 (1-53)||(30640813-30640865)
chr5 (3-46)||(39628819-39628862)
chr5 (1-46)||(4430932-4430977)
chr5 (1-46)||(5042278-5042323)
chr5 (1-46)||(20770161-20770206)
chr5 (38-78)||(4430957-4430997)
chr5 (1-53)||(8675429-8675481)
chr5 (1-53)||(15478681-15478733)
chr5 (2-46)||(23126340-23126384)
chr5 (1-44)||(6931055-6931098)
chr5 (39-78)||(15267794-15267833)
chr5 (10-53)||(18695341-18695384)
chr5 (2-53)||(22098278-22098329)
chr5 (39-78)||(41173262-41173301)
chr5 (10-53)||(41173275-41173318)
chr5 (1-44)||(41175702-41175745)
chr5 (1-34)||(1839341-1839374)
chr5 (1-34)||(3640193-3640226)
chr5 (1-46)||(6446514-6446559)
chr5 (39-93)||(6517705-6517761)
chr5 (1-46)||(6517742-6517787)
chr5 (1-34)||(19839982-19840015)
chr5 (39-89)||(21064248-21064300)
chr5 (9-46)||(42446295-42446332)
chr5 (2-34)||(1079950-1079982)
chr5 (1-53)||(4771520-4771572)
chr5 (2-34)||(8442200-8442232)
chr5 (13-53)||(14321963-14322003)
chr5 (7-35)||(19437297-19437325)
chr5 (2-34)||(26686923-26686955)
chr5 (2-34)||(26956654-26956686)
chr5 (7-35)||(29803265-29803293)
chr5 (2-34)||(34952404-34952436)
chr5 (3-46)||(39088865-39088909)
chr5 (2-34)||(43153058-43153090)
chr5 (1-53)||(43196621-43196673)
[»] chr3 (64 HSPs)
chr3 (1-47)||(11633642-11633688)
chr3 (1-53)||(3347118-3347170)
chr3 (1-53)||(24482959-24483011)
chr3 (1-49)||(26996343-26996391)
chr3 (1-53)||(50206966-50207018)
chr3 (1-46)||(8821660-8821705)
chr3 (1-46)||(10206969-10207014)
chr3 (1-46)||(30909059-30909104)
chr3 (1-46)||(44677480-44677525)
chr3 (1-46)||(49363247-49363292)
chr3 (1-44)||(390841-390884)
chr3 (1-44)||(37508494-37508537)
chr3 (2-53)||(48405433-48405484)
chr3 (1-44)||(55013035-55013078)
chr3 (7-53)||(14207260-14207306)
chr3 (7-53)||(14215008-14215054)
chr3 (1-46)||(32767706-32767751)
chr3 (1-46)||(33375890-33375935)
chr3 (1-46)||(49417605-49417650)
chr3 (2-46)||(5244258-5244302)
chr3 (1-53)||(19150315-19150367)
chr3 (39-78)||(8821640-8821679)
chr3 (1-48)||(8846519-8846566)
chr3 (39-78)||(10206995-10207034)
chr3 (2-53)||(26452720-26452771)
chr3 (10-53)||(27162475-27162517)
chr3 (10-53)||(27718791-27718834)
chr3 (1-48)||(28419210-28419257)
chr3 (10-53)||(29573361-29573404)
chr3 (1-44)||(29634068-29634111)
chr3 (39-78)||(49363273-49363312)
chr3 (39-78)||(54773776-54773815)
chr3 (2-44)||(288757-288799)
chr3 (2-48)||(29917021-29917067)
chr3 (2-48)||(29966174-29966220)
chr3 (8-46)||(37302575-37302613)
chr3 (1-46)||(39671093-39671139)
chr3 (1-34)||(24095402-24095435)
chr3 (9-46)||(25188469-25188506)
chr3 (3-44)||(34064104-34064145)
chr3 (8-53)||(37894246-37894291)
chr3 (1-46)||(37927201-37927246)
chr3 (2-47)||(45293026-45293071)
chr3 (1-46)||(46019492-46019537)
chr3 (1-46)||(46253652-46253697)
chr3 (1-34)||(49761349-49761382)
chr3 (1-46)||(55400029-55400074)
chr3 (7-35)||(4140577-4140605)
chr3 (1-53)||(21196147-21196199)
chr3 (2-46)||(25641568-25641612)
chr3 (2-46)||(26014841-26014885)
chr3 (1-53)||(31376761-31376813)
chr3 (1-53)||(32187164-32187216)
chr3 (50-78)||(33375870-33375898)
chr3 (2-34)||(33939277-33939309)
chr3 (2-34)||(35597203-35597235)
chr3 (10-46)||(37073690-37073726)
chr3 (1-41)||(39697218-39697258)
chr3 (2-46)||(41505520-41505564)
chr3 (1-41)||(43905008-43905048)
chr3 (2-46)||(44413918-44413962)
chr3 (2-46)||(46623936-46623980)
chr3 (1-53)||(54694109-54694161)
chr3 (2-46)||(54773751-54773795)
[»] chr8 (49 HSPs)
chr8 (1-46)||(1633886-1633931)
chr8 (1-46)||(11017835-11017880)
chr8 (1-46)||(30136011-30136056)
chr8 (4-46)||(16966815-16966857)
chr8 (3-53)||(34490155-34490205)
chr8 (1-46)||(7592879-7592924)
chr8 (1-46)||(7956003-7956048)
chr8 (1-46)||(11657996-11658041)
chr8 (1-46)||(33589226-33589271)
chr8 (1-46)||(40739908-40739953)
chr8 (2-46)||(2730958-2731002)
chr8 (1-53)||(16872152-16872204)
chr8 (2-46)||(32847684-32847728)
chr8 (1-53)||(34718138-34718190)
chr8 (1-44)||(41521000-41521043)
chr8 (1-46)||(16327148-16327193)
chr8 (1-46)||(34018838-34018883)
chr8 (1-46)||(37783967-37784012)
chr8 (1-46)||(41159885-41159930)
chr8 (1-46)||(45529242-45529287)
chr8 (1-53)||(5277700-5277752)
chr8 (1-53)||(9549195-9549247)
chr8 (1-53)||(16613657-16613709)
chr8 (1-53)||(29028957-29029009)
chr8 (1-41)||(35564324-35564364)
chr8 (2-46)||(43397810-43397854)
chr8 (39-78)||(1633912-1633951)
chr8 (10-53)||(10644807-10644850)
chr8 (39-78)||(16966795-16966834)
chr8 (2-53)||(25830243-25830294)
chr8 (43-78)||(33589256-33589291)
chr8 (39-78)||(37783993-37784032)
chr8 (2-48)||(35067188-35067234)
chr8 (1-46)||(12707179-12707224)
chr8 (1-34)||(30439502-30439535)
chr8 (8-53)||(33100472-33100517)
chr8 (1-34)||(42569725-42569758)
chr8 (2-46)||(3270876-3270920)
chr8 (6-34)||(5502401-5502429)
chr8 (1-41)||(5864238-5864278)
chr8 (2-46)||(6440111-6440155)
chr8 (2-34)||(11114667-11114699)
chr8 (39-88)||(16872178-16872229)
chr8 (1-49)||(18651397-18651445)
chr8 (1-53)||(23793086-23793138)
chr8 (1-53)||(29991435-29991487)
chr8 (2-46)||(32501194-32501238)
chr8 (14-46)||(34591292-34591324)
chr8 (39-88)||(34718113-34718164)
[»] chr1 (80 HSPs)
chr1 (1-46)||(4514450-4514495)
chr1 (1-46)||(8411714-8411759)
chr1 (1-46)||(9008255-9008300)
chr1 (2-46)||(1852948-1852992)
chr1 (2-46)||(33024568-33024612)
chr1 (1-53)||(33054084-33054136)
chr1 (1-53)||(36577408-36577460)
chr1 (1-48)||(29586021-29586068)
chr1 (2-53)||(48325990-48326041)
chr1 (4-46)||(7128148-7128190)
chr1 (1-46)||(756886-756931)
chr1 (1-46)||(3603141-3603186)
chr1 (1-53)||(34040496-34040548)
chr1 (1-53)||(35136867-35136919)
chr1 (38-78)||(51191798-51191838)
chr1 (2-53)||(49931576-49931627)
chr1 (2-48)||(49570024-49570070)
chr1 (1-46)||(1790538-1790583)
chr1 (39-89)||(3603108-3603160)
chr1 (8-49)||(20565121-20565162)
chr1 (1-46)||(21340552-21340597)
chr1 (1-46)||(26585875-26585920)
chr1 (1-46)||(46082117-46082162)
chr1 (1-46)||(47214238-47214283)
chr1 (1-46)||(47721439-47721484)
chr1 (1-46)||(47728431-47728476)
chr1 (3-48)||(49559197-49559242)
chr1 (1-46)||(51286363-51286408)
chr1 (1-46)||(52362512-52362557)
chr1 (1-49)||(26837479-26837527)
chr1 (1-45)||(38303684-38303728)
chr1 (1-53)||(44294038-44294090)
chr1 (38-78)||(46911303-46911343)
chr1 (39-78)||(756866-756905)
chr1 (1-44)||(4608184-4608227)
chr1 (39-78)||(8411740-8411779)
chr1 (2-53)||(21433398-21433449)
chr1 (39-78)||(26585901-26585940)
chr1 (3-46)||(26967240-26967283)
chr1 (39-78)||(46082143-46082182)
chr1 (1-52)||(50328137-50328188)
chr1 (40-78)||(7128128-7128166)
chr1 (2-44)||(29359670-29359712)
chr1 (1-46)||(902668-902713)
chr1 (1-34)||(8200117-8200150)
chr1 (1-46)||(10890042-10890087)
chr1 (1-46)||(13489692-13489737)
chr1 (2-35)||(14983813-14983846)
chr1 (1-46)||(15705058-15705103)
chr1 (1-34)||(16986980-16987013)
chr1 (1-46)||(21486313-21486358)
chr1 (1-34)||(29154822-29154855)
chr1 (1-46)||(32915068-32915113)
chr1 (1-46)||(34008210-34008255)
chr1 (1-34)||(38713612-38713645)
chr1 (1-34)||(44632570-44632603)
chr1 (1-46)||(46172403-46172448)
chr1 (1-34)||(48220140-48220173)
chr1 (1-34)||(49241501-49241534)
chr1 (2-46)||(649798-649842)
chr1 (2-34)||(1156520-1156552)
chr1 (2-46)||(4466724-4466768)
chr1 (2-46)||(9566958-9567002)
chr1 (1-45)||(15015429-15015473)
chr1 (2-46)||(18434824-18434868)
chr1 (38-78)||(30658869-30658909)
chr1 (2-46)||(30735291-30735335)
chr1 (2-34)||(32960390-32960422)
chr1 (2-34)||(33358156-33358188)
chr1 (39-88)||(35136842-35136893)
chr1 (39-88)||(36577434-36577485)
chr1 (1-53)||(37588671-37588723)
chr1 (2-46)||(37685360-37685404)
chr1 (2-46)||(37700114-37700158)
chr1 (1-53)||(44789139-44789191)
chr1 (9-53)||(45008168-45008212)
chr1 (2-34)||(45470838-45470870)
chr1 (2-34)||(45640342-45640374)
chr1 (6-34)||(51571445-51571473)
chr1 (2-46)||(51571703-51571747)
[»] chr2 (50 HSPs)
chr2 (1-53)||(12889828-12889880)
chr2 (2-46)||(18176970-18177014)
chr2 (1-53)||(36802919-36802971)
chr2 (1-53)||(39213766-39213818)
chr2 (1-44)||(4758635-4758678)
chr2 (1-51)||(34119648-34119698)
chr2 (1-53)||(13347811-13347863)
chr2 (1-53)||(35589383-35589435)
chr2 (1-53)||(39449290-39449342)
chr2 (39-78)||(670489-670528)
chr2 (10-53)||(5031946-5031989)
chr2 (2-53)||(18737871-18737922)
chr2 (2-53)||(36774561-36774612)
chr2 (1-46)||(37257479-37257525)
chr2 (1-46)||(26738876-26738921)
chr2 (1-46)||(28245758-28245803)
chr2 (1-41)||(433885-433925)
chr2 (1-53)||(2841857-2841909)
chr2 (1-53)||(4299522-4299574)
chr2 (1-41)||(4952476-4952516)
chr2 (2-46)||(9207619-9207663)
chr2 (1-53)||(18723617-18723669)
chr2 (1-53)||(38560701-38560753)
chr2 (2-46)||(39147795-39147839)
chr2 (10-53)||(14954605-14954647)
chr2 (39-78)||(37257459-37257498)
chr2 (7-53)||(6742413-6742458)
chr2 (3-53)||(34431825-34431875)
chr2 (1-46)||(6999064-6999109)
chr2 (1-46)||(7552585-7552630)
chr2 (2-35)||(9048399-9048432)
chr2 (1-46)||(16677702-16677747)
chr2 (1-34)||(23352901-23352934)
chr2 (1-34)||(25881586-25881619)
chr2 (1-46)||(29051649-29051694)
chr2 (1-46)||(29684608-29684653)
chr2 (1-34)||(42678791-42678824)
chr2 (2-34)||(6328708-6328740)
chr2 (2-34)||(8482230-8482262)
chr2 (7-35)||(9449418-9449446)
chr2 (2-34)||(13711364-13711396)
chr2 (2-46)||(17779416-17779460)
chr2 (2-46)||(18254207-18254251)
chr2 (2-34)||(18876919-18876951)
chr2 (2-34)||(25094393-25094425)
chr2 (2-46)||(28679346-28679390)
chr2 (1-53)||(39449113-39449165)
chr2 (2-34)||(42372521-42372553)
chr2 (1-53)||(44711985-44712037)
chr2 (2-46)||(44977497-44977541)
[»] chr6 (34 HSPs)
chr6 (1-44)||(4820283-4820326)
chr6 (1-42)||(2075447-2075488)
chr6 (1-46)||(11547525-11547570)
chr6 (1-46)||(30036790-30036835)
chr6 (1-46)||(30152526-30152571)
chr6 (1-53)||(754434-754486)
chr6 (1-49)||(2777312-2777360)
chr6 (1-53)||(13143378-13143430)
chr6 (1-53)||(15318184-15318236)
chr6 (1-53)||(35213557-35213609)
chr6 (3-44)||(34504052-34504093)
chr6 (1-53)||(6531179-6531231)
chr6 (2-46)||(14986742-14986786)
chr6 (1-53)||(15368819-15368871)
chr6 (2-46)||(17551376-17551420)
chr6 (1-53)||(32046721-32046773)
chr6 (2-46)||(32459514-32459558)
chr6 (1-44)||(3610957-3611000)
chr6 (39-78)||(5327614-5327653)
chr6 (7-46)||(8505776-8505815)
chr6 (2-53)||(16337920-16337971)
chr6 (9-46)||(11635539-11635576)
chr6 (2-47)||(15974636-15974681)
chr6 (1-46)||(18141297-18141342)
chr6 (1-46)||(20822864-20822909)
chr6 (1-33)||(868948-868980)
chr6 (38-78)||(3610982-3611022)
chr6 (2-46)||(5080565-5080609)
chr6 (2-46)||(5327589-5327633)
chr6 (1-49)||(13658859-13658907)
chr6 (2-46)||(25811836-25811880)
chr6 (1-53)||(33421783-33421835)
chr6 (2-46)||(34047416-34047460)
chr6 (39-88)||(35213583-35213634)
[»] scaffold0687 (1 HSPs)
scaffold0687 (1-46)||(2227-2272)
[»] scaffold0221 (1 HSPs)
scaffold0221 (1-46)||(8244-8289)
[»] scaffold0204 (1 HSPs)
scaffold0204 (1-46)||(23106-23151)
[»] scaffold0321 (2 HSPs)
scaffold0321 (8-46)||(19666-19704)
scaffold0321 (39-78)||(19646-19685)
[»] scaffold0003 (1 HSPs)
scaffold0003 (2-48)||(366321-366367)
[»] scaffold0532 (1 HSPs)
scaffold0532 (1-46)||(10994-11039)
[»] scaffold0014 (1 HSPs)
scaffold0014 (1-44)||(122863-122906)


Alignment Details
Target: chr4 (Bit Score: 141; Significance: 4e-74; HSPs: 61)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 49 - 228
Target Start/End: Complemental strand, 12112669 - 12112492
Alignment:
Q  49 caaaagttgtcactaaatggatgttgaaat--catttctcattcaattatacatgatagagagaggtttggatcaatatccaatattggaaaagaattaa 146  Q
    ||||||||||||||||||||||||| ||||  ||||| ||||||||||||||||||||||||||||||||||||||||||||   |||||||||||||||    
T  12112669 caaaagttgtcactaaatggatgttcaaatatcatttatcattcaattatacatgatagagagaggtttggatcaatatcca---ttggaaaagaattaa 12112573  T
Q  147 ggtttaatctcaaattagaaatttggctttgttgccttaggagatgcattgtaacacatcagtttttaacagaacaagtgtt 228  Q
    |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  12112572 ggtttaatctcaaattagaa-tttggctttgttgccttaggagatgcattgtaacacatcagtttttaacagaacaagtgtt 12112492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30079921 - 30079876
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  30079921 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 30079876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 5932154 - 5932198
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  5932154 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 5932198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 22819724 - 22819672
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  22819724 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaa 22819672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 624308 - 624353
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  624308 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgt 624353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 9118860 - 9118905
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  9118860 taaaaaataatgtgattatgagagagaaaattgttgcaaaagttgt 9118905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 23822241 - 23822286
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||| |||||||||| |||||||||||||||||||||||    
T  23822241 taaaaaataatatgaatatgagggagaaagttgttgcaaaagttgt 23822286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 48335629 - 48335584
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  48335629 taaaaaataatgtgaatatgagagagaaaattgttgcaaaaattgt 48335584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13086097 - 13086045
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||| ||||||    
T  13086097 taaaaagtaatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaa 13086045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 14527719 - 14527667
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| |||||||| ||||||||| ||||||||||| ||||||    
T  14527719 taaaaaataatgtgagtatgagagtgaaagttgtagcaaaagttgtcacaaaa 14527667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 21260372 - 21260328
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||| ||||||||||||||||||||    
T  21260372 aaaaaataatgtgagtatgagagaaaaagttgttgcaaaagttgt 21260328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39344976 - 39345028
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||||||||||||||||||||| |||| ||||||    
T  39344976 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaa 39345028  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 47099097 - 47099045
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| |||| ||||||||||||||||||||||||| ||||||    
T  47099097 taaaaagtaatgtgagtatgtgagagaaagttgttgcaaaagttgtcacaaaa 47099045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 51887738 - 51887686
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||| ||| |||||||||||||||||| ||||||||||| ||||||    
T  51887738 taaaaaataatttgagtatgagagagaaagttgtagcaaaagttgtcacaaaa 51887686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 20118855 - 20118804
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||||||| |||||||||||| ||||||||||||||| ||||    
T  20118855 aaaatataatgtgaatataagagagaaagttattgcaaaagttgttataaaa 20118804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 49
Target Start/End: Original strand, 36111393 - 36111440
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    ||||| |||||||| ||||||||| |||||||||||||||||||||||    
T  36111393 aaaaagtaatgtgagtatgagagataaagttgttgcaaaagttgttac 36111440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41486139 - 41486182
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  41486139 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagtt 41486182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 46
Target Start/End: Original strand, 6141781 - 6141819
Alignment:
Q  8 taatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  6141781 taatgtgagtatgagagagaaagttgttgcaaaagttgt 6141819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 35820246 - 35820200
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtt 47  Q
    |||||| |||| |||||||||||||||||||||||| ||||||||||    
T  35820246 taaaaagtaatatgaatatgagagagaaagttgttgtaaaagttgtt 35820200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 14451468 - 14451423
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||||| ||||||||    
T  14451468 taaaaactaatgtgagtatgagagagaaagttgttgctaaagttgt 14451423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 28458373 - 28458418
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  28458373 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 28458418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30170016 - 30170061
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  30170016 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 30170061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46405970 - 46406015
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  46405970 taaaaattaatgtgagtatgagagaaaaagttgttgcaaaagttgt 46406015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47965814 - 47965769
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||||    
T  47965814 taaaaagtaatgtgagtatgagagaaaaagttgttgcaaaagttgt 47965769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13263393 - 13263445
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||||| |||| ||| |||||||||||||| ||||||||||| ||||||    
T  13263393 taaaaaataaagtgagtataagagagaaagttgtagcaaaagttgtcacaaaa 13263445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21617258 - 21617206
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||| ||||||    
T  21617258 taaaaaataatgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaa 21617206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 26206973 - 26207013
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaa 41  Q
    |||||| |||||||||||||||||||||| |||||||||||    
T  26206973 taaaaagtaatgtgaatatgagagagaaaattgttgcaaaa 26207013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 33899323 - 33899367
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| |||| || ||||||||||||||||||||||    
T  33899323 aaaaaataatgtgagtatgtgaaagaaagttgttgcaaaagttgt 33899367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 37060391 - 37060347
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||    
T  37060391 aaaatataatgtgaatatgagagagaaagttgtcacaaaagttgt 37060347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 3078913 - 3078956
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  3078913 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 3078956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 5932179 - 5932218
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  5932179 aaagttgttgcaaaagttgtcactaaatggatgtttaaat 5932218  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 18624217 - 18624268
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||| |||||||||||| |||||||||| |||||| || ||||||||    
T  18624217 aaaaaataacgtgaatatgagatagaaagttgtagcaaaaattattacaaaa 18624268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 30079895 - 30079856
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  30079895 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 30079856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 37514137 - 37514180
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  37514137 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 37514180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 42815470 - 42815427
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  42815470 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 42815427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 45
Target Start/End: Complemental strand, 42959345 - 42959302
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttg 45  Q
    |||||||||||||| ||| ||||| |||||||||||||||||||    
T  42959345 aaaaaataatgtgagtataagagataaagttgttgcaaaagttg 42959302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 47519726 - 47519768
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  47519726 atgtgagtatgagagagaaagttgtt-caaaagttgttacaaaa 47519768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 50273065 - 50273108
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||  |||| |||||||||||||||||||||||||    
T  50273065 aaaaataatgtgggtatgtgagagaaagttgttgcaaaagttgt 50273108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 53152317 - 53152360
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||| ||||||||||||| ||| ||||||||||||||    
T  53152317 taaaaaataatatgaatatgagagaaaaaattgttgcaaaagtt 53152360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 2268505 - 2268551
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  2268505 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgtta 2268551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 6520829 - 6520871
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||    
T  6520829 aaaacataatgtgagtatgagagagaaagttgttacaaaagtt 6520871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 6494889 - 6494922
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  6494889 taaaaaataatatgaatatgagagagaaagttgt 6494922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 28657437 - 28657470
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  28657437 taaaaaataatgtgagtatgagagagaaagttgt 28657470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 38338918 - 38338963
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  38338918 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 38338963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 39312612 - 39312645
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  39312612 taaaaaataatgtgagtatgagagagaaagttgt 39312645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 40609683 - 40609642
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||| ||||||||||||||||||  ||||||||    
T  40609683 aaaaataatgtgagtatgagagagaaagttgtcacaaaagtt 40609642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 41389894 - 41389946
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcatt 89  Q
    ||||||||||||||||||||||  ||||||||||| ||  |||||||||||||    
T  41389894 aaagttgttacaaaagttgtcatcaaatggatgttcaattatcatttctcatt 41389946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 43769786 - 43769753
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  43769786 taaaaaataatgtgagtatgagagagaaagttgt 43769753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 2004193 - 2004237
Alignment:
Q  9 aatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||| || |||| |||||||||||||||||||||||| ||||    
T  2004193 aatgtgagtaagagatagaaagttgttgcaaaagttgttaaaaaa 2004237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 5466493 - 5466525
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  5466493 aaaacataatgtgaatatgagagagaaagttgt 5466525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 10250513 - 10250557
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  10250513 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 10250557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Complemental strand, 12112702 - 12112670
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttg 33  Q
    ||||||||||| |||||||||||||||||||||    
T  12112702 taaaaaataatatgaatatgagagagaaagttg 12112670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 14451442 - 14451391
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcat 88  Q
    ||||||||| | ||||||||||||||||||||||| ||  ||||||||||||    
T  14451442 aaagttgttgctaaagttgtcactaaatggatgttcaaatatcatttctcat 14451391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 17475396 - 17475364
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||| ||||||||||||||||||    
T  17475396 aaaaaataatgtgagtatgagagagaaagttgt 17475364  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 21260348 - 21260308
Alignment:
Q  38 aaaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    |||||||||| ||||||||||||||||||| ||||| ||||    
T  21260348 aaaagttgttgcaaaagttgtcactaaatgaatgttcaaat 21260308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 24045318 - 24045274
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| |||||||||||| ||||| |||||||||||    
T  24045318 aaaacataatgtgagtatgagagagaaggttgtcgcaaaagttgt 24045274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 26910275 - 26910231
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||| |||||| |||||||||||||||  ||||||||||    
T  26910275 aaaaaataatatgaatacgagagagaaagttgtcacaaaagttgt 26910231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 31076129 - 31076081
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    |||||||| |||||| ||||||||||||||||||  || ||||||||||    
T  31076129 taaaaaatgatgtgagtatgagagagaaagttgtcccagaagttgttac 31076081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 39478508 - 39478464
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||| ||| ||||||||||||||||||  ||||||||||    
T  39478508 aaaaaataatatgagtatgagagagaaagttgtcacaaaagttgt 39478464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 43175057 - 43175013
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| |||||||||||||||| |  ||||||||||    
T  43175057 aaaaaataatgtgagtatgagagagaaagttatcacaaaagttgt 43175013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 50890071 - 50890115
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  50890071 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgt 50890115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 45; Significance: 9e-17; HSPs: 36)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43573539 - 43573591
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||||||||||||||||||||||| ||||||    
T  43573539 taaaaagtaatgtgaatatgagagagaaagttgttgcaaaagttgtcacaaaa 43573591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39231724 - 39231769
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  39231724 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 39231769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 13729801 - 13729749
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||| |||||||||||||||||||||| ||||||    
T  13729801 taaaaaataatgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaa 13729749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Complemental strand, 28036819 - 28036769
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaa 51  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||| ||||    
T  28036819 taaaaaataatgtgagtataagagagaaagttgttgcaaaagttgtcacaa 28036769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 39332034 - 39331982
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcatt 89  Q
    ||||||||||||||||||||||||||||||||||| ||  |||||||||||||    
T  39332034 aaagttgttacaaaagttgtcactaaatggatgttcaaatatcatttctcatt 39331982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 11564968 - 11564916
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| |||||||||||||||| | ||||||||||| ||||||    
T  11564968 taaaaaataatgtgagtatgagagagaaagttatagcaaaagttgtcacaaaa 11564916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16980372 - 16980320
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||| |||||||||||||||||||||||||| ||||||    
T  16980372 taaaaagtaatgtgagtataagagagaaagttgttgcaaaagttgtcacaaaa 16980320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 29162972 - 29163020
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    |||||| |||||||| |||||||||||||||||||| ||||||||||||    
T  29162972 taaaaagtaatgtgagtatgagagagaaagttgttgtaaaagttgttac 29163020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 40353339 - 40353299
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaa 41  Q
    ||||||||||||||| |||||||||||||||||||||||||    
T  40353339 taaaaaataatgtgagtatgagagagaaagttgttgcaaaa 40353299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 41402581 - 41402537
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||| ||| ||||||||||||||||||||||||||||||    
T  41402581 aaaaaataatatgagtatgagagagaaagttgttgcaaaagttgt 41402537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 46812901 - 46812953
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||| ||||| |||||||||||||| ||||||||||| ||||||    
T  46812901 taaaaaataatgtaaatataagagagaaagttgtagcaaaagttgtcacaaaa 46812953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 38779740 - 38779783
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  38779740 taaaaaataatgtgagtatgagagaaaaagttgttgcaaaagtt 38779783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 44
Target Start/End: Original strand, 27163656 - 27163698
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||||||||||||| ||| ||||||||||||||||||||||||    
T  27163656 aaaaaataatgtgagtataagagagaaagttgttgcaaaagtt 27163698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13162994 - 13162949
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||| ||| ||||||||||||||||||||||||||||||    
T  13162994 taaaaagtaatatgagtatgagagagaaagttgttgcaaaagttgt 13162949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 19786075 - 19786120
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||    
T  19786075 taaaaagtaatgtgagtatgtgagagaaagttgttgcaaaagttgt 19786120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21559873 - 21559828
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||| |||||||| |||||||||||    
T  21559873 taaaaaataatgtgagtatgagagataaagttgtagcaaaagttgt 21559828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 29002683 - 29002638
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| || |||||||||||||||||||||||||||    
T  29002683 taaaaagtaatgtgattacgagagagaaagttgttgcaaaagttgt 29002638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 1471296 - 1471339
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  1471296 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 1471339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 19786101 - 19786140
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  19786101 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 19786140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 42584876 - 42584825
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||| ||||    
T  42584876 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaa 42584825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 3293204 - 3293171
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||||| |||||||||||||||||||||||||    
T  3293204 taaaaaattatgtgaatatgagagagaaagttgt 3293171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 4713648 - 4713615
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||||| ||||||||||||||||    
T  4713648 taaaaaataatgtgaatttgagagagaaagttgt 4713615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21023113 - 21023158
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||| ||||||| || | |||||||||||    
T  21023113 taaaaaataatgtgaatatgaaagagaaaattatcgcaaaagttgt 21023158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32815243 - 32815198
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||| ||| ||||||||||| ||||    
T  32815243 taaaaaataatgtgagtatgagagaaaaaattgttgcaaaaattgt 32815198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37808760 - 37808805
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||| | ||||||||||||| ||||||||||| ||||    
T  37808760 taaaaaataatgtaagtatgagagagaaaattgttgcaaaaattgt 37808805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 39332060 - 39332015
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||| ||||||||||||||| ||||||||||    
T  39332060 taaaaagtaatgtgagtataagagagaaagttgttacaaaagttgt 39332015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 41458671 - 41458626
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||| | ||||| ||||    
T  41458671 taaaaaataatgtgagtatgagagagaaagttgctacaaaaattgt 41458626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44184555 - 44184600
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  44184555 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 44184600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 47078247 - 47078280
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  47078247 taaaaaataatgtgagtatgagagagaaagttgt 47078280  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 13906455 - 13906499
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||| | ||| |||||||||||||||||||| |||||    
T  13906455 aaaaaataatgtaagtataagagagaaagttgttgcaaaggttgt 13906499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16708235 - 16708183
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||| ||||||||||| |||||||||| ||||| ||| | ||||||    
T  16708235 taaaaaataatatgaatatgagaaagaaagttgtagcaaaggttatcacaaaa 16708183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 17682471 - 17682419
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||| ||||||||||| |||||||||| ||||| ||| | ||||||    
T  17682471 taaaaaataatatgaatatgagaaagaaagttgtagcaaaggttatcacaaaa 17682419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 26041874 - 26041906
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||| ||||||||||||||||||    
T  26041874 aaaaaataatgtgagtatgagagagaaagttgt 26041906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 30941459 - 30941415
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  30941459 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 30941415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33180706 - 33180758
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||| ||||   ||||||||| ||||||    
T  33180706 taaaaaataatgtgagtatgagagagaaaattgtcataaaagttgtcacaaaa 33180758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 35212953 - 35212985
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  35212953 aaaacataatgtgaatatgagagagaaagttgt 35212985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 45; Significance: 9e-17; HSPs: 44)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 43441813 - 43441761
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  43441813 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgttacaaaa 43441761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 15267859 - 15267814
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||| ||||||||||||||||||||||||||||||||||    
T  15267859 taaaaaataatatgaatatgagagagaaagttgttgcaaaagttgt 15267814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 35099001 - 35099046
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  35099001 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 35099046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 16437562 - 16437606
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  16437562 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 16437606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 18842317 - 18842360
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  18842317 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagtt 18842360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 2688982 - 2689027
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||| ||||||| ||||||||||||||||||||||||    
T  2688982 taaaaaataatgtaaatatgaaagagaaagttgttgcaaaagttgt 2689027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8267816 - 8267861
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||| ||||    
T  8267816 taaaaaataatgtgagtatgagagagaaagttgttgcaaaaattgt 8267861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21064222 - 21064267
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  21064222 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgt 21064267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 30640865 - 30640813
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||| ||||||||||||||||||||  |||||||||| ||||||    
T  30640865 taaaaaataatgtaaatatgagagagaaagttgtaacaaaagttgtcacaaaa 30640813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 39628862 - 39628819
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||||||||||||  ||||||||||    
T  39628862 aaaaataatgtgaatatgagagagaaagttgtcacaaaagttgt 39628819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4430932 - 4430977
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||| |||||| ||||||||| ||||||||||||||||||||    
T  4430932 taaaaaatgatgtgagtatgagagaaaaagttgttgcaaaagttgt 4430977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 5042323 - 5042278
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||| ||||||||||||||| ||||    
T  5042323 taaaaaataatgtgagtatgagagataaagttgttgcaaaaattgt 5042278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 20770206 - 20770161
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  20770206 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 20770161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 4430957 - 4430997
Alignment:
Q  38 aaaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    |||||||||| ||||||||||||||||||||||||| ||||    
T  4430957 aaaagttgttgcaaaagttgtcactaaatggatgttcaaat 4430997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 8675429 - 8675481
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||||||||| |||||||||||||| | ||||||    
T  8675429 taaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttatcacaaaa 8675481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 15478733 - 15478681
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||| || ||||||||||| | ||||||    
T  15478733 taaaaaataatgtgagtatgagagagaaaattattgcaaaagttatcacaaaa 15478681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 23126340 - 23126384
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| |||| |||||||| ||||||||||||||||    
T  23126340 aaaaaataatgtgagtatgggagagaaaattgttgcaaaagttgt 23126384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 6931055 - 6931098
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||| ||||| ||| ||||||||||||||||||    
T  6931055 taaaaaataatgtgagtatgaaagataaagttgttgcaaaagtt 6931098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 15267833 - 15267794
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  15267833 aaagttgttgcaaaagttgtcactaaatggatgttaaaat 15267794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 18695384 - 18695341
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  18695384 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 18695341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 22098329 - 22098278
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||| ||||    
T  22098329 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaa 22098278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 41173301 - 41173262
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||||||||||||||||| ||||||||||| ||||    
T  41173301 aaagttgttacaaaagttgtcacaaaatggatgtttaaat 41173262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 41173318 - 41173275
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||| |||||||||| ||||||    
T  41173318 atgtgagtatgagagagaaagttgttacaaaagttgtcacaaaa 41173275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 41175702 - 41175745
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||    
T  41175702 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagtt 41175745  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 1839341 - 1839374
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  1839341 taaaaaataatgtgagtatgagagagaaagttgt 1839374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 3640193 - 3640226
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  3640193 taaaaaataatgtgagtatgagagagaaagttgt 3640226  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6446514 - 6446559
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  6446514 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 6446559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 93
Target Start/End: Complemental strand, 6517761 - 6517705
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcattcaat 93  Q
    |||||||| |||||||||||||  ||||||||||| ||  |||||||||||||||||    
T  6517761 aaagttgtcacaaaagttgtcataaaatggatgttcaaatatcatttctcattcaat 6517705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 6517787 - 6517742
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  6517787 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 6517742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 19839982 - 19840015
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  19839982 taaaaaataatgtgagtatgagagagaaagttgt 19840015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 39 - 89
Target Start/End: Original strand, 21064248 - 21064300
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcatt 89  Q
    ||||||||| ||||||||||||||||||| ||||| ||  |||||||||||||    
T  21064248 aaagttgttgcaaaagttgtcactaaatgaatgttcaaatatcatttctcatt 21064300  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 42446295 - 42446332
Alignment:
Q  9 aatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||| || |||||||||||||||||||||||||||    
T  42446295 aatgtgagtaagagagagaaagttgttgcaaaagttgt 42446332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 1079950 - 1079982
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  1079950 aaaagataatgtgaatatgagagagaaagttgt 1079982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 4771572 - 4771520
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||  |||||||||||| |||||| |||| ||||||    
T  4771572 taaaaaataatgtgagtatgcaagagaaagttgtagcaaaatttgtcacaaaa 4771520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 8442232 - 8442200
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  8442232 aaaagataatgtgaatatgagagagaaagttgt 8442200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 13 - 53
Target Start/End: Original strand, 14321963 - 14322003
Alignment:
Q  13 tgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||||||||||  |||||||||||| ||||    
T  14321963 tgaatatgagagagaaagttgtcacaaaagttgttagaaaa 14322003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 19437325 - 19437297
Alignment:
Q  7 ataatgtgaatatgagagagaaagttgtt 35  Q
    |||||||||||||||||||||||||||||    
T  19437325 ataatgtgaatatgagagagaaagttgtt 19437297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 26686955 - 26686923
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  26686955 aaaatataatgtgaatatgagagagaaagttgt 26686923  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 26956686 - 26956654
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  26956686 aaaatataatgtgaatatgagagagaaagttgt 26956654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Complemental strand, 29803293 - 29803265
Alignment:
Q  7 ataatgtgaatatgagagagaaagttgtt 35  Q
    |||||||||||||||||||||||||||||    
T  29803293 ataatgtgaatatgagagagaaagttgtt 29803265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 34952404 - 34952436
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  34952404 aaaatataatgtgaatatgagagagaaagttgt 34952436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 3 - 46
Target Start/End: Original strand, 39088865 - 39088909
Alignment:
Q  3 aaaaataatgtgaa-tatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||  ||||||||||||| ||||||||||||||||    
T  39088865 aaaaataatgtgaggtatgagagagaaaattgttgcaaaagttgt 39088909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 43153058 - 43153090
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  43153058 aaaagataatgtgaatatgagagagaaagttgt 43153090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 43196621 - 43196673
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||| ||||||||||  ||||| |||| ||||||    
T  43196621 taaaaaataatgtgagtatgagaaagaaagttgtaacaaaaattgtcacaaaa 43196673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 64)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 47
Target Start/End: Complemental strand, 11633688 - 11633642
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtt 47  Q
    |||||| ||||||||||||||||||||||||||||||||||||||||    
T  11633688 taaaaagtaatgtgaatatgagagagaaagttgttgcaaaagttgtt 11633642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 3347118 - 3347170
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||||||||||||||||||||||||||||| ||||||||| | ||||||    
T  3347118 taaaaaataatgtgaatatgagagagaaagttgtagcaaaagttatcacaaaa 3347170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 24482959 - 24483011
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  24482959 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaa 24483011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26996391 - 26996343
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||||||    
T  26996391 taaaaaataatgtgagtatgagagagaaagttgttacaaaagttgttac 26996343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 50206966 - 50207018
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  50206966 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaa 50207018  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8821705 - 8821660
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||| ||||||||||    
T  8821705 taaaaaataatgtgagtatgagagagaaagttgttacaaaagttgt 8821660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10206969 - 10207014
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  10206969 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgt 10207014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 30909104 - 30909059
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||||||| ||||||||||||||||||||||||||    
T  30909104 taaaaagtaatgtgaatataagagagaaagttgttgcaaaagttgt 30909059  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 44677480 - 44677525
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  44677480 taaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgt 44677525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 49363247 - 49363292
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  49363247 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgt 49363292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 390884 - 390841
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||    
T  390884 taaaaaataatgtgagtatgagagaaaaagttgttgcaaaagtt 390841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 37508494 - 37508537
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||||| |||||||| ||||||||||||||||||||||||||||    
T  37508494 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagtt 37508537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 48405484 - 48405433
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||| ||||||||||||||||||| |||||||||| ||||||    
T  48405484 aaaacataatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaa 48405433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 55013078 - 55013035
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||||| |||||||||||| ||||||||||||||||||||||||    
T  55013078 taaaaagtaatgtgaatataagagagaaagttgttgcaaaagtt 55013035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 14207260 - 14207306
Alignment:
Q  7 ataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||    
T  14207260 ataatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 14207306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 14215008 - 14215054
Alignment:
Q  7 ataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||| ||||||||||||||||||  |||||||||||||||||    
T  14215008 ataatgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 14215054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 32767751 - 32767706
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||| || |||||||||||||    
T  32767751 taaaaaataatgtgagtatgagagagaaaattattgcaaaagttgt 32767706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 33375935 - 33375890
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||| |||||| |||||||||    
T  33375935 taaaaaataatgtgagtatgagagagaaaattgttgtaaaagttgt 33375890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 49417650 - 49417605
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  49417650 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 49417605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 5244302 - 5244258
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||    
T  5244302 aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 5244258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 19150315 - 19150367
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||| ||||||| ||||||||||||||||||||  |||||||||||| ||||    
T  19150315 taaaatataatgtaaatatgagagagaaagttgtcacaaaagttgttaaaaaa 19150367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 8821679 - 8821640
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    |||||||||||||||||||||||||||| |||||| ||||    
T  8821679 aaagttgttacaaaagttgtcactaaatagatgttcaaat 8821640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 8846566 - 8846519
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    ||||||||||||||| ||||||||||||| ||||  ||||||||||||    
T  8846566 taaaaaataatgtgagtatgagagagaaaattgtcacaaaagttgtta 8846519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 10206995 - 10207034
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  10206995 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 10207034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 26452720 - 26452771
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||| ||||    
T  26452720 aaaatataatgtgagtatgagagagaaagttgtaacaaaagttgttagaaaa 26452771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 27162475 - 27162517
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||| |||||||||||||||||    
T  27162475 atgtgagtatgagagagaaagttgtt-caaaagttgttacaaaa 27162517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 27718791 - 27718834
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  27718791 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 27718834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 48
Target Start/End: Original strand, 28419210 - 28419257
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    ||||||||||||| | ||||| | ||||||||||||||||||||||||    
T  28419210 taaaaaataatgtaagtatgaaaaagaaagttgttgcaaaagttgtta 28419257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 29573361 - 29573404
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  29573361 atgtgagtatgagagagaaagttgtcacaaaagttgttacaaaa 29573404  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 29634068 - 29634111
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||| ||||||| ||||||||| ||||||||||||||    
T  29634068 taaaaaataatatgaatataagagagaaaattgttgcaaaagtt 29634111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 49363273 - 49363312
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  49363273 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 49363312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 54773776 - 54773815
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  54773776 aaagttgttataaaagttgtcactaaatggatgttcaaat 54773815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 288799 - 288757
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||||||||||||| ||||||||||||||||||  ||||||||    
T  288799 aaaaaataatgtgagtatgagagagaaagttgtcacaaaagtt 288757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 29917021 - 29917067
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  29917021 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgtta 29917067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Original strand, 29966174 - 29966220
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  29966174 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgtta 29966220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 37302613 - 37302575
Alignment:
Q  8 taatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||||||||||||||||  ||||||||||    
T  37302613 taatgtgaatatgagagagaaagttgtcacaaaagttgt 37302575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 39671093 - 39671139
Alignment:
Q  1 taaaaaataatgtgaatatga-gagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||||    
T  39671093 taaaaagtaatgtgagtatgaagagagaaagttgttgcaaaagttgt 39671139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 24095402 - 24095435
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  24095402 taaaaaataatgtgagtatgagagagaaagttgt 24095435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 25188469 - 25188506
Alignment:
Q  9 aatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||| || |||||||||||||||||||||||||||    
T  25188469 aatgtgagtaagagagagaaagttgttgcaaaagttgt 25188506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 3 - 44
Target Start/End: Original strand, 34064104 - 34064145
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||| ||||||||| ||||||||| ||||||||    
T  34064104 aaaaataatgtgagtatgagagataaagttgttacaaaagtt 34064145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 37894246 - 37894291
Alignment:
Q  8 taatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||| ||||||||||||||||||  |||||||||||| ||||    
T  37894246 taatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaa 37894291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37927201 - 37927246
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||| |||||| ||||||||||||||||||  ||||||||||    
T  37927201 taaaaaattatgtgagtatgagagagaaagttgtcacaaaagttgt 37927246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Original strand, 45293026 - 45293071
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtt 47  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||    
T  45293026 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgtt 45293071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46019537 - 46019492
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  46019537 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 46019492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 46253697 - 46253652
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||| ||| ||||||||||||||||    
T  46253697 taaaaagtaatgtgagtatgagagaaaaaattgttgcaaaagttgt 46253652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 49761382 - 49761349
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  49761382 taaaaaataatgtgagtatgagagagaaagttgt 49761349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 55400074 - 55400029
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  55400074 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 55400029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 4140577 - 4140605
Alignment:
Q  7 ataatgtgaatatgagagagaaagttgtt 35  Q
    |||||||||||||||||||||||||||||    
T  4140577 ataatgtgaatatgagagagaaagttgtt 4140605  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 21196199 - 21196147
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||| | ||||||||||||||||||  || ||||||| ||||||    
T  21196199 taaaaaataatgtaagtatgagagagaaagttgtcacagaagttgtcacaaaa 21196147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 25641568 - 25641612
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||| |||||||| |||||||||||    
T  25641568 aaaacataatgtgagtatgagagacaaagttgtagcaaaagttgt 25641612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 26014885 - 26014841
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  26014885 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 26014841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 31376761 - 31376813
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||| |||||| ||||| ||||||||||||  |||||||||| ||||||    
T  31376761 taaaaaattatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaa 31376813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32187216 - 32187164
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||| |||||||||||||||||||||| |||||   ||||||||| ||||||    
T  32187216 taaaacataatgtgaatatgagagagaaggttgtcataaaagttgtcacaaaa 32187164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 50 - 78
Target Start/End: Complemental strand, 33375898 - 33375870
Alignment:
Q  50 aaaagttgtcactaaatggatgttgaaat 78  Q
    |||||||||||||||||||||||||||||    
T  33375898 aaaagttgtcactaaatggatgttgaaat 33375870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 33939309 - 33939277
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  33939309 aaaagataatgtgaatatgagagagaaagttgt 33939277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 35597235 - 35597203
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||| ||||||||||||||||||    
T  35597235 aaaaaataatgtgagtatgagagagaaagttgt 35597203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 10 - 46
Target Start/End: Complemental strand, 37073726 - 37073690
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||| |||||| ||||||||||    
T  37073726 atgtgaatatgagagagaatgttgtttcaaaagttgt 37073690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 39697218 - 39697258
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaa 41  Q
    |||||| |||||||| ||||||||||||||||||| |||||    
T  39697218 taaaaagtaatgtgagtatgagagagaaagttgttacaaaa 39697258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #59
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 41505564 - 41505520
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  41505564 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 41505520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 43905048 - 43905008
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaa 41  Q
    |||||| |||||||| ||||||||||||||||||| |||||    
T  43905048 taaaaagtaatgtgagtatgagagagaaagttgttacaaaa 43905008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 44413918 - 44413962
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  44413918 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 44413962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 46623980 - 46623936
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||||||| ||||||||||||||  ||||||||||    
T  46623980 aaaagataatgtgaatatcagagagaaagttgtcacaaaagttgt 46623936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 54694109 - 54694161
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||||| ||||  ||||||||||||||||| |||||| |||| ||||||    
T  54694109 taaaaaataacgtgataatgagagagaaagttgtagcaaaaattgtcacaaaa 54694161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 54773751 - 54773795
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||| ||| |||||||||||||||||||  |||||||||    
T  54773751 aaaaaataatatgagtatgagagagaaagttgttataaaagttgt 54773795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 49)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 1633886 - 1633931
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  1633886 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 1633931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11017880 - 11017835
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  11017880 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 11017835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30136011 - 30136056
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||||||||||||||||||||||||||||||||||    
T  30136011 taaaaagtaatgtgaatatgagagagaaagttgttgcaaaagttgt 30136056  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 16966857 - 16966815
Alignment:
Q  4 aaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||| ||||||||||||||||||||||||||||||    
T  16966857 aaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 16966815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 34490155 - 34490205
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||| ||| |||||||||||||||||||||||||| ||||||    
T  34490155 aaaaataatgtgagtataagagagaaagttgttgcaaaagttgtcacaaaa 34490205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7592924 - 7592879
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  7592924 taaaaaataatgtgactatgagagataaagttgttgcaaaagttgt 7592879  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 7956003 - 7956048
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  7956003 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgt 7956048  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11657996 - 11658041
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  11657996 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgt 11658041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 33589226 - 33589271
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  33589226 taaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgt 33589271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 40739908 - 40739953
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||||| ||| ||||||||||||||||    
T  40739908 taaaaaataatgtgaatatgagagaaaaaattgttgcaaaagttgt 40739953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 2730958 - 2731002
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||||||||||||||||||||||| ||||||||||    
T  2730958 aaaagataatgtgaatatgagagagaaagttgttacaaaagttgt 2731002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 16872152 - 16872204
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||| |||||||||||||||||||||||| ||||||    
T  16872152 taaaaagtaatgtgagtatgatagagaaagttgttgcaaaagttgtcacaaaa 16872204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 32847684 - 32847728
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||    
T  32847684 aaaaaataatgtgagtataagagagaaagttgttgcaaaagttgt 32847728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 34718190 - 34718138
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||||||||  |||||||||| ||||||    
T  34718190 taaaaaataatgtgagtatgagagagaaagttgtaacaaaagttgtcacaaaa 34718138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 41521043 - 41521000
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||    
T  41521043 taaaaaataatgtgagtatgagagagaaaattgttgcaaaagtt 41521000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 16327148 - 16327193
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| |||||||||||||||||| |||||||||||    
T  16327148 taaaaagtaatgtgagtatgagagagaaagttgtcgcaaaagttgt 16327193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34018883 - 34018838
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||| ||||||||||||||||    
T  34018883 taaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttgt 34018838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 37783967 - 37784012
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||| ||| ||||||||||||||||||||||||||||||    
T  37783967 taaaaagtaatctgagtatgagagagaaagttgttgcaaaagttgt 37784012  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 41159885 - 41159930
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  41159885 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 41159930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 45529242 - 45529287
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||| ||||| ||||    
T  45529242 taaaaaataatgtgagtatgagagagaaagttgttacaaaaattgt 45529287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 5277700 - 5277752
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||| |||| ||||| ||||| ||||||    
T  5277700 taaaaaataatgtgagtatgagagagaaaattgtagcaaaggttgtcacaaaa 5277752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 9549195 - 9549247
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||| ||||  |||||||||| ||||||    
T  9549195 taaaaaataatgtgagtatgagagagaaaattgtcacaaaagttgtcacaaaa 9549247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 16613709 - 16613657
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||| |||||||| |||||| |||| ||||||    
T  16613709 taaaaaataatgtgagtatgagagaaaaagttgtagcaaaaattgtcacaaaa 16613657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 29028957 - 29029009
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||| |||||||||||||| ||||||||| | ||||||    
T  29028957 taaaaaataatgtgagtataagagagaaagttgtagcaaaagttatcacaaaa 29029009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 35564364 - 35564324
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaa 41  Q
    ||||||||||||||| ||||||| |||||||||||||||||    
T  35564364 taaaaaataatgtgagtatgagatagaaagttgttgcaaaa 35564324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 43397854 - 43397810
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||    
T  43397854 aaaaaataatgtgagtatgagagagaaagttgtaacaaaagttgt 43397810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 1633912 - 1633951
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  1633912 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 1633951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 10644807 - 10644850
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| ||||||||||||||||||  |||||||||||||||||    
T  10644807 atgtgattatgagagagaaagttgtcacaaaagttgttacaaaa 10644850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 16966834 - 16966795
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  16966834 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 16966795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 25830243 - 25830294
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||| ||||||||||||||||||  |||||||||||| ||||    
T  25830243 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgttagaaaa 25830294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 43 - 78
Target Start/End: Original strand, 33589256 - 33589291
Alignment:
Q  43 ttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||| ||||||||||||||||||||||||||||||    
T  33589256 ttgttgcaaaagttgtcactaaatggatgttgaaat 33589291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 37783993 - 37784032
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  37783993 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 37784032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 35067234 - 35067188
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||||    
T  35067234 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgtta 35067188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 12707224 - 12707179
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| ||| |||| |||||||||||||||||| |||||||||||    
T  12707224 taaaaagtaacgtgagtatgagagagaaagttgtcgcaaaagttgt 12707179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 30439502 - 30439535
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  30439502 taaaaaataatgtgagtatgagagagaaagttgt 30439535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 8 - 53
Target Start/End: Original strand, 33100472 - 33100517
Alignment:
Q  8 taatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||| ||||||||||||||||||  |||||||||||| ||||    
T  33100472 taatgtgagtatgagagagaaagttgtcacaaaagttgttataaaa 33100517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 42569725 - 42569758
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||| |||||||||||||||||||||||||||    
T  42569725 taaaaagtaatgtgaatatgagagagaaagttgt 42569758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 3270876 - 3270920
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||||||| ||||||||||||||  ||||||||||    
T  3270876 aaaatataatgtgaatattagagagaaagttgtcacaaaagttgt 3270920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 5502429 - 5502401
Alignment:
Q  6 aataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||||||||||||||||||    
T  5502429 aataatgtgaatatgagagagaaagttgt 5502401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 5864278 - 5864238
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaa 41  Q
    ||||||||||||||| ||||||||||||| ||||| |||||    
T  5864278 taaaaaataatgtgattatgagagagaaaattgttacaaaa 5864238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 6440155 - 6440111
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  6440155 aaaatataatgtgagtatgagagagaaagttgtcacaaaagttgt 6440111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 11114667 - 11114699
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  11114667 aaaacataatgtgaatatgagagagaaagttgt 11114699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 16872178 - 16872229
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcat 88  Q
    ||||||||| ||||||||||||| ||||||||||| ||  ||||||||||||    
T  16872178 aaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctcat 16872229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 18651445 - 18651397
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    |||||||| |||||| ||||||||||||| ||||  |||||||||||||    
T  18651445 taaaaaatgatgtgagtatgagagagaaaattgtcacaaaagttgttac 18651397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 23793086 - 23793138
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| |||||||||||| |||||  || ||||||| ||||||    
T  23793086 taaaaaataatgtgagtatgagagagaatgttgtcacataagttgtcacaaaa 23793138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 29991487 - 29991435
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||| |||||| ||||| ||||||||||||  |||||||||| ||||||    
T  29991487 taaaaaatgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaa 29991435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 32501194 - 32501238
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||| |||||  |||||||||    
T  32501194 aaaaaataatgtgagtatgagagagaaaattgttaaaaaagttgt 32501238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 14 - 46
Target Start/End: Complemental strand, 34591324 - 34591292
Alignment:
Q  14 gaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||| ||||||||||||||||||||||||    
T  34591324 gaatatgaaagagaaagttgttgcaaaagttgt 34591292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 34718164 - 34718113
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcat 88  Q
    |||||||| |||||||||||||| ||||||||||| ||  ||||||||||||    
T  34718164 aaagttgtaacaaaagttgtcacaaaatggatgttcaaatatcatttctcat 34718113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 80)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 4514450 - 4514495
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||    
T  4514450 taaaaaataatgtgaatatgagatagaaagttgttgcaaaagttgt 4514495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 8411714 - 8411759
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  8411714 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 8411759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 9008300 - 9008255
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||    
T  9008300 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 9008255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 1852948 - 1852992
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  1852948 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 1852992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 33024568 - 33024612
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  33024568 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 33024612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 33054084 - 33054136
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  33054084 taaaaaataatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaa 33054136  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 36577408 - 36577460
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| |||||||||||||||||||||||||||||| ||||||    
T  36577408 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgtcacaaaa 36577460  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 48
Target Start/End: Complemental strand, 29586068 - 29586021
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||||    
T  29586068 taaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgtta 29586021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 48326041 - 48325990
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||||||| | |||||||||||||||||||||||||||||| ||||||    
T  48326041 aaaaaataatgtaagtatgagagagaaagttgttgcaaaagttgtcacaaaa 48325990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 4 - 46
Target Start/End: Complemental strand, 7128190 - 7128148
Alignment:
Q  4 aaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||| |||||||||||||||||||    
T  7128190 aaaataatgtgaatatgagagaggaagttgttgcaaaagttgt 7128148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 756931 - 756886
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||| ||||||||||||||||||||||    
T  756931 taaaaaataatgtgagtatgagaaagaaagttgttgcaaaagttgt 756886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 3603186 - 3603141
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||||||||||||||    
T  3603186 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaagttgt 3603141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 34040496 - 34040548
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| |||||||||||||||||||| ||||||| | ||||||    
T  34040496 taaaaaataatgtgagtatgagagagaaagttgttgtaaaagttatcacaaaa 34040548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 35136919 - 35136867
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||| |||||||||||||||||||||| ||||||    
T  35136919 taaaaagtaatgtgagtatgagaaagaaagttgttgcaaaagttgtcacaaaa 35136867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 51191838 - 51191798
Alignment:
Q  38 aaaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||||||||||||||||||| |||||||||||||||    
T  51191838 aaaagttgttacaaaagttgtcactgaatggatgttgaaat 51191798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 49931627 - 49931576
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||| ||||    
T  49931627 aaaatataatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaa 49931576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 49570070 - 49570024
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||||    
T  49570070 aaaatataatgtgaatatgagagagaaagttgtcacaaaagttgtta 49570024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 1790583 - 1790538
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||| ||| ||||||||||||||||||||||||||||||    
T  1790583 taaaaagtaatttgagtatgagagagaaagttgttgcaaaagttgt 1790538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 39 - 89
Target Start/End: Complemental strand, 3603160 - 3603108
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcatt 89  Q
    ||||||||| ||||||||||||||||||||||||| ||  |||||||||||||    
T  3603160 aaagttgttgcaaaagttgtcactaaatggatgttcaaatatcatttctcatt 3603108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 8 - 49
Target Start/End: Original strand, 20565121 - 20565162
Alignment:
Q  8 taatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    |||||||| ||||||||||||||||||||||||| |||||||    
T  20565121 taatgtgagtatgagagagaaagttgttgcaaaaattgttac 20565162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 21340597 - 21340552
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||| ||||||||||||||||||||||||    
T  21340597 taaaaagtaatgtgagtatgaaagagaaagttgttgcaaaagttgt 21340552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26585875 - 26585920
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| |||  |||||||||||||||||||||||||    
T  26585875 taaaaaataatgtgagtataggagagaaagttgttgcaaaagttgt 26585920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46082117 - 46082162
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| |||| |||||||||||||||||||||||||    
T  46082117 taaaaagtaatgtgagtatgcgagagaaagttgttgcaaaagttgt 46082162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47214283 - 47214238
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  47214283 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 47214238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47721484 - 47721439
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||    
T  47721484 taaaaaataatgtgaatatgagacagaaagttgtcacaaaagttgt 47721439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 47728476 - 47728431
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||| ||||||||||  ||||||||||    
T  47728476 taaaaaataatgtgaatatgagacagaaagttgtcacaaaagttgt 47728431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 48
Target Start/End: Original strand, 49559197 - 49559242
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    ||||||||||| ||||||||||||||||||||  ||||||||||||    
T  49559197 aaaaataatgtaaatatgagagagaaagttgtcacaaaagttgtta 49559242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 51286363 - 51286408
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  51286363 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 51286408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 52362557 - 52362512
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  52362557 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 52362512  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 26837527 - 26837479
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    |||||| ||| |||| ||||||||||||| |||||||||||||||||||    
T  26837527 taaaaagtaacgtgagtatgagagagaaaattgttgcaaaagttgttac 26837479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 45
Target Start/End: Original strand, 38303684 - 38303728
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttg 45  Q
    |||||||||||| || |||||||||||||||||||| ||||||||    
T  38303684 taaaaaataatgcgagtatgagagagaaagttgttgtaaaagttg 38303728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 44294090 - 44294038
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||| || |||||||| |||| ||||||    
T  44294090 taaaaaataatgtgagtatgagagagaaaattattgcaaaaattgtcacaaaa 44294038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 38 - 78
Target Start/End: Complemental strand, 46911343 - 46911303
Alignment:
Q  38 aaaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| |||||||||||||| ||||||||||||||||    
T  46911343 aaaagttgtaacaaaagttgtcacaaaatggatgttgaaat 46911303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 756905 - 756866
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  756905 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 756866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4608227 - 4608184
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||    
T  4608227 taaaaaataatgtgagtatgagagagaaagttgtaacaaaagtt 4608184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 8411740 - 8411779
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  8411740 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 8411779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 21433398 - 21433449
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||| ||| ||||||||||||||  |||||||||||||||||    
T  21433398 aaaacataatgtgagtataagagagaaagttgtcacaaaagttgttacaaaa 21433449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 26585901 - 26585940
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  26585901 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 26585940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 3 - 46
Target Start/End: Complemental strand, 26967283 - 26967240
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||  ||||||||||    
T  26967283 aaaaataatgtgaatgtgagagagaaagttgtcacaaaagttgt 26967240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 46082143 - 46082182
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  46082143 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 46082182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 52
Target Start/End: Original strand, 50328137 - 50328188
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaa 52  Q
    |||||| ||| |||| ||||| |||||||||||||||||||||||| |||||    
T  50328137 taaaaagtaacgtgagtatgaaagagaaagttgttgcaaaagttgtcacaaa 50328188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 7128166 - 7128128
Alignment:
Q  40 aagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    |||||||| ||||||||||||||||||||||||| ||||    
T  7128166 aagttgttgcaaaagttgtcactaaatggatgttcaaat 7128128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 2 - 44
Target Start/End: Complemental strand, 29359712 - 29359670
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||    
T  29359712 aaaagataatgtgagtatgagagagaaagttgttacaaaagtt 29359670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 902713 - 902668
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| |||||||||||||||||||  |||||||||    
T  902713 taaaaagtaatgtgagtatgagagagaaagttgttataaaagttgt 902668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 8200150 - 8200117
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  8200150 taaaaaataatgtgagtatgagagagaaagttgt 8200117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 10890042 - 10890087
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  10890042 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 10890087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 13489737 - 13489692
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  13489737 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 13489692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Complemental strand, 14983846 - 14983813
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgtt 35  Q
    |||| |||||||||||||||||||||||||||||    
T  14983846 aaaacataatgtgaatatgagagagaaagttgtt 14983813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 15705058 - 15705103
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  15705058 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 15705103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 16987013 - 16986980
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  16987013 taaaaaataatgtgagtatgagagagaaagttgt 16986980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 21486313 - 21486358
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| |||||||||||||||| || ||| ||||||    
T  21486313 taaaaaataatgtgagtatgagagagaaagttattacaatagttgt 21486358  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 29154855 - 29154822
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  29154855 taaaaaataatgtgagtatgagagagaaagttgt 29154822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 32915068 - 32915113
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  32915068 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 32915113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 34008255 - 34008210
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||| ||||||||||  ||||||||||    
T  34008255 taaaaaataatgtgagtatgagatagaaagttgtcacaaaagttgt 34008210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 38713645 - 38713612
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||| ||||||||||||||||||||||    
T  38713645 taaaaaataatatgaatatgagagagaaagttgt 38713612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 44632603 - 44632570
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  44632603 taaaaaataatgtgagtatgagagagaaagttgt 44632570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 46172403 - 46172448
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||| || || ||||||||||    
T  46172403 taaaaaataatgtgagtatgagagagaaaattattacaaaagttgt 46172448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 48220140 - 48220173
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  48220140 taaaaaataatgtgagtatgagagagaaagttgt 48220173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 49241501 - 49241534
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  49241501 taaaaaataatgtgagtatgagagagaaagttgt 49241534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 649842 - 649798
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  649842 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 649798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #61
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 1156552 - 1156520
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  1156552 aaaacataatgtgaatatgagagagaaagttgt 1156520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #62
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 4466768 - 4466724
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||| ||||||||| ||||||||||| ||||||||||    
T  4466768 aaaacataatgtaaatatgagacagaaagttgttacaaaagttgt 4466724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #63
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 9566958 - 9567002
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  9566958 aaaacataatgtgagtatgagagagaaagttgtcacaaaagttgt 9567002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #64
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 45
Target Start/End: Complemental strand, 15015473 - 15015429
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttg 45  Q
    ||||||||||||| | ||||||||||||||||||  |||||||||    
T  15015473 taaaaaataatgtaagtatgagagagaaagttgtcacaaaagttg 15015429  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #65
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 18434868 - 18434824
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||||| ||||||||||||||||  ||||||||||    
T  18434868 aaaacataatgtgaatgtgagagagaaagttgtcacaaaagttgt 18434824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #66
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 30658869 - 30658909
Alignment:
Q  38 aaaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| |||||||||||||| ||||||||||| ||||    
T  30658869 aaaagttgtaacaaaagttgtcacaaaatggatgttcaaat 30658909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 30735291 - 30735335
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||| ||||||||  ||||||||||    
T  30735291 aaaaaataatgtgagtatgagagaaaaagttgtcacaaaagttgt 30735335  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 32960422 - 32960390
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  32960422 aaaatataatgtgaatatgagagagaaagttgt 32960390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 33358156 - 33358188
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||| ||||||||||||||||||    
T  33358156 aaaaaataatgtgagtatgagagagaaagttgt 33358188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Complemental strand, 35136893 - 35136842
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcat 88  Q
    ||||||||| ||||||||||||| ||||||||||| ||  ||||||||||||    
T  35136893 aaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctcat 35136842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 36577434 - 36577485
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcat 88  Q
    ||||||||| ||||||||||||| ||||||||||| ||  ||||||||||||    
T  36577434 aaagttgttgcaaaagttgtcacaaaatggatgttcaaatatcatttctcat 36577485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #72
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 37588671 - 37588723
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||| |||||| ||||| ||||||||||||  |||||||||| ||||||    
T  37588671 taaaaaattatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaa 37588723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #73
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 37685404 - 37685360
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  37685404 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 37685360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #74
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 37700114 - 37700158
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  37700114 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 37700158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #75
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44789139 - 44789191
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||| |||||| ||||| ||||||||||||  |||||||||| ||||||    
T  44789139 taaaaaatgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaa 44789191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #76
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 9 - 53
Target Start/End: Original strand, 45008168 - 45008212
Alignment:
Q  9 aatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||| |||||||||||||||| || |||||||||| ||||||    
T  45008168 aatgtgagtatgagagagaaagttattacaaaagttgtcacaaaa 45008212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #77
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 45470838 - 45470870
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  45470838 aaaatataatgtgaatatgagagagaaagttgt 45470870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #78
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 45640374 - 45640342
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||| ||||||||||||||||||    
T  45640374 aaaaaataatgtgagtatgagagagaaagttgt 45640342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #79
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 6 - 34
Target Start/End: Complemental strand, 51571473 - 51571445
Alignment:
Q  6 aataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||||||||||||||||||    
T  51571473 aataatgtgaatatgagagagaaagttgt 51571445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #80
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 51571703 - 51571747
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||||||||||||| ||||||||  ||||||||||    
T  51571703 aaaacataatgtgaatatgagagaaaaagttgtcacaaaagttgt 51571747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 50)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 12889828 - 12889880
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  12889828 taaaaaataatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaa 12889880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 18177014 - 18176970
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||||||||||||||||||||    
T  18177014 aaaaaataatgtgagtatgagagagaaagttgttgcaaaagttgt 18176970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 36802971 - 36802919
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| |||||||||||||||||| ||||||||||| ||||||    
T  36802971 taaaaaataatgtgagtatgagagagaaagttgtagcaaaagttgtcacaaaa 36802919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39213766 - 39213818
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||| |||||||||||||||||||| ||||||    
T  39213766 taaaaaataatgtgagtatgagagataaagttgttgcaaaagttgtcacaaaa 39213818  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 4758635 - 4758678
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  4758635 taaaaaataatgtgaatatgaaagagaaagttgttgcaaaagtt 4758678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 51
Target Start/End: Original strand, 34119648 - 34119698
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaa 51  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||||||    
T  34119648 taaaaaataatgtgagtatgagagagaaagttgtcgtaaaagttgttacaa 34119698  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13347811 - 13347863
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||||||||||||||||||||| |||| ||||||    
T  13347811 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaa 13347863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35589383 - 35589435
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||| ||||||    
T  35589383 taaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttgtcacaaaa 35589435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 39449342 - 39449290
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||| ||| |||||||||||||||||||||||||||||| ||||||    
T  39449342 taaaaagtaatctgagtatgagagagaaagttgttgcaaaagttgtcacaaaa 39449290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 670489 - 670528
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||||||||||||||||||||||||||||| ||||    
T  670489 aaagttgttacaaaagttgtcactaaatggatgttcaaat 670528  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 10 - 53
Target Start/End: Complemental strand, 5031989 - 5031946
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||||||||||||| ||||||||||||||||||    
T  5031989 atgtgagtatgagagagaaagttgtcgcaaaagttgttacaaaa 5031946  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 18737871 - 18737922
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||| ||||    
T  18737871 aaaatataatgtgaatatgagagagaaagttgtcacaaaagttgttaaaaaa 18737922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 2 - 53
Target Start/End: Complemental strand, 36774612 - 36774561
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||||||||||||||||||||||  |||||||||||| ||||    
T  36774612 aaaatataatgtgaatatgagagagaaagttgtctcaaaagttgttagaaaa 36774561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 37257525 - 37257479
Alignment:
Q  1 taaaaaataatgtgaata-tgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| || ||||||||||||||||||||||||||||    
T  37257525 taaaaaataatgtgagtaatgagagagaaagttgttgcaaaagttgt 37257479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 26738876 - 26738921
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||| | ||||||| ||||||||||||||||||||||    
T  26738876 taaaaaataatgtaagtatgagaaagaaagttgttgcaaaagttgt 26738921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 28245803 - 28245758
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  28245803 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 28245758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Complemental strand, 433925 - 433885
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaa 41  Q
    |||||||| |||||| |||||||||||||||||||||||||    
T  433925 taaaaaatgatgtgagtatgagagagaaagttgttgcaaaa 433885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 2841909 - 2841857
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||| ||||||||||  |||||||||| ||||||    
T  2841909 taaaaaataatgtgagtatgagaaagaaagttgtaacaaaagttgtcacaaaa 2841857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 4299522 - 4299574
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||||||| || |||||||||||||||||| | ||||||||| ||||||    
T  4299522 taaaaaataatgcgagtatgagagagaaagttgtagaaaaagttgtcacaaaa 4299574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 41
Target Start/End: Original strand, 4952476 - 4952516
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaa 41  Q
    ||||||||||||||||||||| | |||||||||||||||||    
T  4952476 taaaaaataatgtgaatatgaaatagaaagttgttgcaaaa 4952516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 9207663 - 9207619
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||||||||||||||||  ||||||||||    
T  9207663 aaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 9207619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 18723669 - 18723617
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||||||||  ||||| |||| ||||||    
T  18723669 taaaaaataatgtgagtatgagagagaaagttgtaacaaaaattgtcacaaaa 18723617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 38560753 - 38560701
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||| | ||||||||||  |||||||||||||||||    
T  38560753 taaaaaataatgtgagtatgacaaagaaagttgtaacaaaagttgttacaaaa 38560701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 39147839 - 39147795
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||||||||| ||||||||||||| ||||||||||    
T  39147839 aaaacataatgtgaatatgaaagagaaagttgttacaaaagttgt 39147795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 10 - 53
Target Start/End: Original strand, 14954605 - 14954647
Alignment:
Q  10 atgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||||||||||||||||||||| |||||||||| ||||||    
T  14954605 atgtgaatatgagagagaaagttgtt-caaaagttgtcacaaaa 14954647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 37257498 - 37257459
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  37257498 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 37257459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 7 - 53
Target Start/End: Original strand, 6742413 - 6742458
Alignment:
Q  7 ataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||| |||||||||| ||||||    
T  6742413 ataatgtgaatatgaaagagaaagttgtt-caaaagttgtcacaaaa 6742458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 3 - 53
Target Start/End: Original strand, 34431825 - 34431875
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||| ||| ||||||||||||||  ||||| |||||||||||    
T  34431825 aaaaataatgtgagtataagagagaaagttgtcacaaaaattgttacaaaa 34431875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 6999064 - 6999109
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  6999064 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 6999109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 7552630 - 7552585
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||| | ||||||||||||||||||||| ||||||||||    
T  7552630 taaaaagtaatataaatatgagagagaaagttgttacaaaagttgt 7552585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 35
Target Start/End: Original strand, 9048399 - 9048432
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgtt 35  Q
    |||||||||||||||||||||||| |||||||||    
T  9048399 aaaaaataatgtgaatatgagagataaagttgtt 9048432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 16677747 - 16677702
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||||||| | ||||||| ||||||||||||||||    
T  16677747 taaaaagtaatgtgaatataaaagagaaaattgttgcaaaagttgt 16677702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Original strand, 23352901 - 23352934
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  23352901 taaaaaataatgtgagtatgagagagaaagttgt 23352934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 25881619 - 25881586
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  25881619 taaaaaataatgtgagtatgagagagaaagttgt 25881586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29051649 - 29051694
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||| | ||||| ||||||| ||||||||||||||||    
T  29051649 taaaaaataatgtaagtatgaaagagaaaattgttgcaaaagttgt 29051694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 29684608 - 29684653
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| ||| |||| ||||||||||||||||||||||||| ||||    
T  29684608 taaaaagtaaggtgagtatgagagagaaagttgttgcaaaaattgt 29684653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 34
Target Start/End: Complemental strand, 42678824 - 42678791
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||||||||||| ||||||||||||||||||    
T  42678824 taaaaaataatgtgagtatgagagagaaagttgt 42678791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 6328740 - 6328708
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  6328740 aaaacataatgtgaatatgagagagaaagttgt 6328708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 8482230 - 8482262
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  8482230 aaaatataatgtgaatatgagagagaaagttgt 8482262  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 7 - 35
Target Start/End: Original strand, 9449418 - 9449446
Alignment:
Q  7 ataatgtgaatatgagagagaaagttgtt 35  Q
    |||||||||||||||||||||||||||||    
T  9449418 ataatgtgaatatgagagagaaagttgtt 9449446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 13711364 - 13711396
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||||||||||||| ||||||||    
T  13711364 aaaaaataatgtgaatatgagagataaagttgt 13711396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 17779460 - 17779416
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||| | ||||||||| ||||||||||||||| ||||    
T  17779460 aaaaaataatgtaagtatgagagaaaaagttgttgcaaaaattgt 17779416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 18254207 - 18254251
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  18254207 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 18254251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #44
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Original strand, 18876919 - 18876951
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    ||||||| |||||||||||||||||||||||||    
T  18876919 aaaaaattatgtgaatatgagagagaaagttgt 18876951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #45
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 25094425 - 25094393
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||| ||||||||||||||||||||||||||||    
T  25094425 aaaacataatgtgaatatgagagagaaagttgt 25094393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #46
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 28679390 - 28679346
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||  |||||||||||||||||| |||||||||||    
T  28679390 aaaatataatgtgtgtatgagagagaaagttgtcgcaaaagttgt 28679346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 39449113 - 39449165
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||| |||||| ||||| ||||||||||||  |||||||||| ||||||    
T  39449113 taaaaaatgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaa 39449165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 34
Target Start/End: Complemental strand, 42372553 - 42372521
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgt 34  Q
    |||||||||||||| ||||||||||||||||||    
T  42372553 aaaaaataatgtgagtatgagagagaaagttgt 42372521  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 44711985 - 44712037
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||| ||||| ||||| |||||||||||| |||||| |||| ||||||    
T  44711985 taaaaaatagtgtgagtatgaaagagaaagttgtagcaaaaattgtcacaaaa 44712037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 44977497 - 44977541
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||| ||||||||||||||| ||||| ||||||||||    
T  44977497 aaaacataatgtaaatatgagagagaaaattgttacaaaagttgt 44977541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 40; Significance: 0.00000000000008; HSPs: 34)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 4820326 - 4820283
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||||| ||||||||||||||||||||||||||||    
T  4820326 taaaaaataatgtgagtatgagagagaaagttgttgcaaaagtt 4820283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 42
Target Start/End: Original strand, 2075447 - 2075488
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaag 42  Q
    ||||||||||||||| ||||||||||||||||||||||||||    
T  2075447 taaaaaataatgtgagtatgagagagaaagttgttgcaaaag 2075488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 11547525 - 11547570
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||| ||||||||||||||||    
T  11547525 taaaaaataatgtgagtatgagagagaaaattgttgcaaaagttgt 11547570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30036790 - 30036835
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  30036790 taaaaaattatgtgattatgagagagaaagttgttgcaaaagttgt 30036835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 30152526 - 30152571
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||| |||||| ||||||||||||||||||||||||||||||    
T  30152526 taaaaaattatgtgagtatgagagagaaagttgttgcaaaagttgt 30152571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 754434 - 754486
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||||| |||||||||||||||||||| ||||||    
T  754434 taaaaagtaatgtgagtatgagagaaaaagttgttgcaaaagttgtcacaaaa 754486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 49
Target Start/End: Original strand, 2777312 - 2777360
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    |||||| |||||||| ||||||||||||| |||||||||||||||||||    
T  2777312 taaaaagtaatgtgagtatgagagagaaaattgttgcaaaagttgttac 2777360  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 13143378 - 13143430
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||||||||||||||||||||| |||| ||||||    
T  13143378 taaaaagtaatgtgagtatgagagagaaagttgttgcaaaaattgtcacaaaa 13143430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15318184 - 15318236
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| |||||||||||||||||||||||||||||  |||||||||| ||||||    
T  15318184 taaataataatgtgaatatgagagagaaagttgtaacaaaagttgtcacaaaa 15318236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 35213557 - 35213609
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||| |||||||| ||||||||||||||||||| |||||||||| ||||||    
T  35213557 taaaaagtaatgtgagtatgagagagaaagttgttacaaaagttgtcacaaaa 35213609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 3 - 44
Target Start/End: Complemental strand, 34504093 - 34504052
Alignment:
Q  3 aaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||| |||||||| ||||||||||||||||||||||||||||    
T  34504093 aaaagtaatgtgagtatgagagagaaagttgttgcaaaagtt 34504052  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 6531179 - 6531231
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| ||||||||||||||||||  || ||||||| ||||||    
T  6531179 taaaaaataatgtgagtatgagagagaaagttgtcccataagttgtcacaaaa 6531231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 14986742 - 14986786
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||| ||||| ||||||||||||| ||||||||||||||||    
T  14986742 aaaaaatagtgtgagtatgagagagaaaattgttgcaaaagttgt 14986786  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Original strand, 15368819 - 15368871
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| |||||||| | ||||||||||||||||||  |||||||||||||||||    
T  15368819 taaagaataatgttagtatgagagagaaagttgtaacaaaagttgttacaaaa 15368871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 17551376 - 17551420
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||| ||||||||||    
T  17551376 aaaacataatgtgagtatgagagagaaagttgttacaaaagttgt 17551420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 32046773 - 32046721
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    ||||||||||||||| |||||||||||| |||||  || ||||||||||||||    
T  32046773 taaaaaataatgtgagtatgagagagaaggttgtcacataagttgttacaaaa 32046721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 32459514 - 32459558
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||| |||||||||||||||||||||||||||  ||||||||||    
T  32459514 aaaaagtaatgtgaatatgagagagaaagttgtcacaaaagttgt 32459558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Original strand, 3610957 - 3611000
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    |||||| |||||||| ||||||||| ||||||||||||||||||    
T  3610957 taaaaagtaatgtgagtatgagagaaaaagttgttgcaaaagtt 3611000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Original strand, 5327614 - 5327653
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    |||||||||| |||||||||||||||||||||||| ||||    
T  5327614 aaagttgttataaaagttgtcactaaatggatgttcaaat 5327653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 7 - 46
Target Start/End: Original strand, 8505776 - 8505815
Alignment:
Q  7 ataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||||||||  ||||||||||    
T  8505776 ataatgtgaatatgagagagaaagttgtcacaaaagttgt 8505815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 2 - 53
Target Start/End: Original strand, 16337920 - 16337971
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||| ||||||||| ||||||||||||||||||| |||||||| ||| ||||    
T  16337920 aaaatataatgtgagtatgagagagaaagttgttacaaaagttattataaaa 16337971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 9 - 46
Target Start/End: Original strand, 11635539 - 11635576
Alignment:
Q  9 aatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||||||  ||||||||||    
T  11635539 aatgtgaatatgagagagaaagttgtcacaaaagttgt 11635576  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 2 - 47
Target Start/End: Complemental strand, 15974681 - 15974636
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtt 47  Q
    |||| ||||||||||||||||||||||||||||  |||| ||||||    
T  15974681 aaaagataatgtgaatatgagagagaaagttgtaacaaatgttgtt 15974636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 18141297 - 18141342
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  18141297 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 18141342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 1 - 46
Target Start/End: Original strand, 20822864 - 20822909
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||||||| ||||||||||||||||||  ||||||||||    
T  20822864 taaaaagtaatgtgagtatgagagagaaagttgtcacaaaagttgt 20822909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 33
Target Start/End: Original strand, 868948 - 868980
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttg 33  Q
    ||||||||||| |||||||||||||||||||||    
T  868948 taaaaaataatatgaatatgagagagaaagttg 868980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 38 - 78
Target Start/End: Original strand, 3610982 - 3611022
Alignment:
Q  38 aaaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    |||||||||| |||||||| |||||||||||||||| ||||    
T  3610982 aaaagttgttgcaaaagttatcactaaatggatgttcaaat 3611022  T

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Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 5080565 - 5080609
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||||||| ||||| ||||||||||||  ||||||||||    
T  5080565 aaaaaataatgtgagtatgaaagagaaagttgtcacaaaagttgt 5080609  T

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Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 5327589 - 5327633
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||||| ||| |||||||||||||||||||  |||||||||    
T  5327589 aaaaaataatatgagtatgagagagaaagttgttataaaagttgt 5327633  T

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Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 49
Target Start/End: Complemental strand, 13658907 - 13658859
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttac 49  Q
    ||||||||||||||| ||||| ||||||||||||  ||| |||||||||    
T  13658907 taaaaaataatgtgagtatgaaagagaaagttgtcacaatagttgttac 13658859  T

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Target: chr6; HSP #31
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Original strand, 25811836 - 25811880
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  25811836 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 25811880  T

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Target: chr6; HSP #32
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 1 - 53
Target Start/End: Complemental strand, 33421835 - 33421783
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgttacaaaa 53  Q
    |||||||| |||||| ||||| ||||||||||||  |||||||||| ||||||    
T  33421835 taaaaaatgatgtgagtatgaaagagaaagttgtaacaaaagttgtcacaaaa 33421783  T

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Target: chr6; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 2 - 46
Target Start/End: Complemental strand, 34047460 - 34047416
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||| ||||||||| ||||||||||||||||||  ||||||||||    
T  34047460 aaaagataatgtgagtatgagagagaaagttgtcacaaaagttgt 34047416  T

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Target: chr6; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 39 - 88
Target Start/End: Original strand, 35213583 - 35213634
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaa--atcatttctcat 88  Q
    ||||||||||||||||||||||| |||| |||||| ||  ||||||||||||    
T  35213583 aaagttgttacaaaagttgtcacaaaatagatgttcaaatatcatttctcat 35213634  T

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Target: scaffold0687 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0687
Description:

Target: scaffold0687; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 2272 - 2227
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||    
T  2272 taaaaaataatgtgactatgagagataaagttgttgcaaaagttgt 2227  T

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Target: scaffold0221 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0221
Description:

Target: scaffold0221; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 8289 - 8244
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||| |||| ||||||||||||||||||||||||||||||||||    
T  8289 taaaaagtaatatgaatatgagagagaaagttgttgcaaaagttgt 8244  T

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Target: scaffold0204 (Bit Score: 38; Significance: 0.000000000001; HSPs: 1)
Name: scaffold0204
Description:

Target: scaffold0204; HSP #1
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 23151 - 23106
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||||||||||||||||| ||||||||||| ||||    
T  23151 taaaaaataatgtgaatatgagagagaaaattgttgcaaaaattgt 23106  T

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Target: scaffold0321 (Bit Score: 35; Significance: 0.00000000008; HSPs: 2)
Name: scaffold0321
Description:

Target: scaffold0321; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 8 - 46
Target Start/End: Complemental strand, 19704 - 19666
Alignment:
Q  8 taatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    |||||||| ||||||||||||||||||||||||||||||    
T  19704 taatgtgagtatgagagagaaagttgttgcaaaagttgt 19666  T

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Target: scaffold0321; HSP #2
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 39 - 78
Target Start/End: Complemental strand, 19685 - 19646
Alignment:
Q  39 aaagttgttacaaaagttgtcactaaatggatgttgaaat 78  Q
    ||||||||| ||||||||||||||||||||||||| ||||    
T  19685 aaagttgttgcaaaagttgtcactaaatggatgttcaaat 19646  T

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Target: scaffold0003 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 2 - 48
Target Start/End: Complemental strand, 366367 - 366321
Alignment:
Q  2 aaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgtta 48  Q
    |||| ||||||||||||||||||||||||||||  ||||||||||||    
T  366367 aaaacataatgtgaatatgagagagaaagttgtcacaaaagttgtta 366321  T

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Target: scaffold0532 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0532
Description:

Target: scaffold0532; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 1 - 46
Target Start/End: Complemental strand, 11039 - 10994
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagttgt 46  Q
    ||||||||||||||| ||||||||||||||||||  ||||||||||    
T  11039 taaaaaataatgtgagtatgagagagaaagttgtcacaaaagttgt 10994  T

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Target: scaffold0014 (Bit Score: 32; Significance: 0.000000005; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 1 - 44
Target Start/End: Complemental strand, 122906 - 122863
Alignment:
Q  1 taaaaaataatgtgaatatgagagagaaagttgttgcaaaagtt 44  Q
    ||||||||||||| | |||||| |||||||||||||||||||||    
T  122906 taaaaaataatgtaagtatgagtgagaaagttgttgcaaaagtt 122863  T

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