View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4054_high_12 (Length: 215)
Name: NF4054_high_12
Description: NF4054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4054_high_12 |
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Alignment Details
Target: chr7 (Bit Score: 175; Significance: 2e-94; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 175; E-Value: 2e-94
Query Start/End: Original strand, 17 - 199
Target Start/End: Complemental strand, 41778319 - 41778137
Alignment:
| Q |
17 |
atgaataccacaaagtataaacaagtgtaatgatatgattgttagcaagtagctaacgatcaaccactaattcttatagaaaggaaggctatcacgcctt |
116 |
Q |
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| T |
41778319 |
atgaataccacaaagtataaacaagtgtaatgatatgattgttagcaagtagctaacaatcaaccactaattcttatagaagggaaggctatcacgcctt |
41778220 |
T |
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| Q |
117 |
gtttattgaatacagaaagtgaccttcaagtgtagccaacaaggaattggccacatagaaacataaacattgaatgaatacac |
199 |
Q |
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| T |
41778219 |
gtttattgaatacagaaagtgaccttcaagtgtagccaacaaggaattggccacatagaaacataaacattgaatgaatacac |
41778137 |
T |
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