View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4054_high_4 (Length: 390)

Name: NF4054_high_4
Description: NF4054
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4054_high_4
NF4054_high_4
[»] chr1 (37 HSPs)
chr1 (111-389)||(34460903-34461163)
chr1 (325-388)||(11063574-11063637)
chr1 (306-389)||(8177176-8177259)
chr1 (306-389)||(36371469-36371552)
chr1 (307-389)||(9165189-9165271)
chr1 (304-389)||(33700767-33700852)
chr1 (305-389)||(4566546-4566630)
chr1 (326-389)||(10526842-10526905)
chr1 (311-389)||(17745250-17745328)
chr1 (311-388)||(14787331-14787408)
chr1 (307-387)||(50901581-50901662)
chr1 (327-387)||(9643805-9643865)
chr1 (307-371)||(31794276-31794340)
chr1 (307-382)||(16169979-16170054)
chr1 (307-382)||(19528328-19528403)
chr1 (318-389)||(52336768-52336839)
chr1 (304-382)||(27430116-27430194)
chr1 (318-380)||(42787219-42787281)
chr1 (324-373)||(21184398-21184447)
chr1 (304-389)||(21547474-21547559)
chr1 (306-387)||(34228873-34228953)
chr1 (306-387)||(51814493-51814574)
chr1 (327-387)||(2219992-2220052)
chr1 (306-382)||(6122793-6122869)
chr1 (305-389)||(8904412-8904496)
chr1 (310-382)||(15786321-15786393)
chr1 (305-373)||(40257397-40257465)
chr1 (304-371)||(21268005-21268072)
chr1 (327-382)||(24573432-24573487)
chr1 (327-382)||(37400294-37400349)
chr1 (306-377)||(41508830-41508901)
chr1 (319-389)||(2799874-2799944)
chr1 (318-388)||(9879449-9879519)
chr1 (325-355)||(15310612-15310642)
chr1 (331-388)||(27567117-27567174)
chr1 (308-388)||(44126396-44126476)
chr1 (318-382)||(52029938-52030002)
[»] chr8 (28 HSPs)
chr8 (305-382)||(19703488-19703565)
chr8 (304-382)||(16852337-16852415)
chr8 (307-387)||(968362-968442)
chr8 (309-387)||(3624582-3624660)
chr8 (307-389)||(18540298-18540380)
chr8 (309-374)||(2203494-2203559)
chr8 (309-389)||(8794339-8794419)
chr8 (306-382)||(28783059-28783135)
chr8 (306-381)||(12988427-12988502)
chr8 (307-389)||(33017214-33017296)
chr8 (305-382)||(18897164-18897241)
chr8 (327-387)||(12281514-12281574)
chr8 (327-387)||(30774732-30774792)
chr8 (306-374)||(44780123-44780191)
chr8 (307-389)||(20994451-20994534)
chr8 (306-368)||(28566104-28566166)
chr8 (306-368)||(28573727-28573789)
chr8 (305-374)||(5264542-5264611)
chr8 (340-389)||(24675506-24675555)
chr8 (306-374)||(4830486-4830554)
chr8 (325-389)||(6536538-6536602)
chr8 (307-347)||(23874418-23874458)
chr8 (307-382)||(6436556-6436631)
chr8 (307-382)||(11819776-11819851)
chr8 (307-374)||(26688865-26688932)
chr8 (318-389)||(35690058-35690129)
chr8 (305-378)||(14701422-14701493)
chr8 (308-382)||(29858050-29858124)
[»] chr7 (43 HSPs)
chr7 (307-389)||(26459404-26459486)
chr7 (307-389)||(33869439-33869521)
chr7 (305-387)||(17041008-17041090)
chr7 (306-388)||(43215183-43215265)
chr7 (296-387)||(45709704-45709797)
chr7 (307-388)||(39631844-39631925)
chr7 (304-387)||(14058250-14058333)
chr7 (304-387)||(14368278-14368361)
chr7 (307-382)||(39499720-39499795)
chr7 (307-385)||(3280484-3280561)
chr7 (306-388)||(23552117-23552199)
chr7 (307-373)||(25021345-25021411)
chr7 (307-385)||(48771938-48772016)
chr7 (307-348)||(26199509-26199550)
chr7 (318-387)||(41519106-41519175)
chr7 (325-389)||(33222388-33222452)
chr7 (306-382)||(38374600-38374676)
chr7 (310-389)||(4566422-4566501)
chr7 (307-382)||(22760863-22760938)
chr7 (306-389)||(25655222-25655305)
chr7 (307-382)||(30442488-30442563)
chr7 (306-389)||(30579334-30579417)
chr7 (307-374)||(42836010-42836077)
chr7 (307-388)||(37094749-37094830)
chr7 (307-371)||(5273602-5273666)
chr7 (305-389)||(24438241-24438325)
chr7 (306-382)||(42711957-42712033)
chr7 (307-382)||(20335832-20335907)
chr7 (328-387)||(20952145-20952204)
chr7 (307-382)||(43590907-43590982)
chr7 (307-389)||(2962460-2962541)
chr7 (311-373)||(19612650-19612711)
chr7 (307-385)||(31835192-31835270)
chr7 (307-373)||(48716280-48716346)
chr7 (307-380)||(7801180-7801253)
chr7 (305-382)||(11720961-11721038)
chr7 (307-388)||(18363696-18363777)
chr7 (313-382)||(21877814-21877883)
chr7 (307-388)||(29196905-29196986)
chr7 (306-382)||(33460423-33460500)
chr7 (325-389)||(11700183-11700247)
chr7 (313-389)||(21558134-21558210)
chr7 (307-371)||(25956305-25956368)
[»] chr4 (31 HSPs)
chr4 (307-389)||(37109345-37109427)
chr4 (307-389)||(46545711-46545793)
chr4 (307-389)||(1730483-1730565)
chr4 (306-389)||(7949448-7949531)
chr4 (307-382)||(31759659-31759734)
chr4 (325-389)||(10047998-10048062)
chr4 (324-388)||(23377973-23378037)
chr4 (305-377)||(32003087-32003159)
chr4 (307-389)||(37274453-37274536)
chr4 (307-382)||(55427201-55427276)
chr4 (310-388)||(7292793-7292871)
chr4 (327-389)||(11592147-11592209)
chr4 (304-389)||(19680782-19680867)
chr4 (325-382)||(38869786-38869843)
chr4 (304-388)||(4923547-4923631)
chr4 (312-388)||(13265103-13265179)
chr4 (325-389)||(16581711-16581775)
chr4 (307-387)||(20770911-20770991)
chr4 (306-382)||(37720215-37720291)
chr4 (310-366)||(41683752-41683808)
chr4 (307-382)||(19238578-19238653)
chr4 (310-388)||(33438473-33438551)
chr4 (307-389)||(2622389-2622475)
chr4 (325-382)||(8714697-8714754)
chr4 (307-380)||(9241028-9241101)
chr4 (306-343)||(27965550-27965587)
chr4 (330-387)||(42644906-42644963)
chr4 (318-387)||(49576890-49576959)
chr4 (303-343)||(14350306-14350346)
chr4 (318-386)||(21775919-21775987)
chr4 (306-382)||(51250523-51250599)
[»] chr2 (36 HSPs)
chr2 (306-382)||(37480074-37480150)
chr2 (306-389)||(11251086-11251169)
chr2 (307-382)||(42327396-42327471)
chr2 (305-371)||(42602552-42602618)
chr2 (305-382)||(29503269-29503346)
chr2 (306-389)||(11738038-11738121)
chr2 (309-382)||(12086130-12086203)
chr2 (307-389)||(42922414-42922497)
chr2 (307-389)||(19244109-19244191)
chr2 (304-374)||(34041597-34041667)
chr2 (304-389)||(1729813-1729898)
chr2 (305-389)||(4060208-4060292)
chr2 (306-382)||(39714991-39715067)
chr2 (307-389)||(40416384-40416466)
chr2 (307-388)||(5147674-5147755)
chr2 (306-387)||(7799031-7799112)
chr2 (308-389)||(16918572-16918653)
chr2 (305-389)||(33569852-33569937)
chr2 (308-373)||(37755981-37756046)
chr2 (331-387)||(4262298-4262354)
chr2 (306-382)||(25931005-25931081)
chr2 (307-382)||(12994377-12994452)
chr2 (306-389)||(14500276-14500359)
chr2 (327-382)||(21213789-21213844)
chr2 (307-382)||(23052524-23052599)
chr2 (310-373)||(30359657-30359720)
chr2 (306-385)||(38854460-38854539)
chr2 (307-388)||(11062360-11062441)
chr2 (311-360)||(24191842-24191891)
chr2 (305-382)||(30808648-30808725)
chr2 (325-389)||(13803513-13803577)
chr2 (300-372)||(19322761-19322833)
chr2 (306-382)||(21195677-21195753)
chr2 (325-385)||(28846709-28846769)
chr2 (325-389)||(30410543-30410607)
chr2 (326-382)||(42420288-42420344)
[»] chr3 (25 HSPs)
chr3 (305-388)||(32651433-32651515)
chr3 (306-389)||(15048055-15048138)
chr3 (307-389)||(4222141-4222223)
chr3 (307-389)||(16354886-16354968)
chr3 (307-387)||(14186648-14186727)
chr3 (327-387)||(21960571-21960631)
chr3 (306-389)||(27093355-27093438)
chr3 (306-389)||(46518627-46518710)
chr3 (304-382)||(30311303-30311381)
chr3 (307-389)||(10445133-10445216)
chr3 (305-387)||(24481579-24481660)
chr3 (307-388)||(37788460-37788541)
chr3 (304-373)||(39976441-39976510)
chr3 (306-382)||(19154630-19154706)
chr3 (307-387)||(26481927-26482007)
chr3 (307-387)||(40063619-40063699)
chr3 (307-382)||(8170672-8170747)
chr3 (307-382)||(27923044-27923119)
chr3 (310-389)||(53412948-53413027)
chr3 (318-388)||(2667873-2667943)
chr3 (305-347)||(8051212-8051254)
chr3 (307-389)||(31788964-31789046)
chr3 (305-386)||(11642206-11642287)
chr3 (310-366)||(28928896-28928952)
chr3 (304-388)||(36720378-36720462)
[»] scaffold0002 (1 HSPs)
scaffold0002 (310-389)||(94965-95044)
[»] chr6 (14 HSPs)
chr6 (304-387)||(20744505-20744588)
chr6 (318-389)||(28363948-28364019)
chr6 (306-388)||(12188298-12188380)
chr6 (304-382)||(10338175-10338253)
chr6 (306-387)||(33549103-33549184)
chr6 (325-389)||(3925762-3925826)
chr6 (307-378)||(3779339-3779410)
chr6 (304-387)||(12234503-12234586)
chr6 (307-382)||(14557962-14558037)
chr6 (303-374)||(31623000-31623071)
chr6 (313-382)||(34444809-34444878)
chr6 (331-387)||(6519166-6519222)
chr6 (307-371)||(21943440-21943503)
chr6 (330-382)||(31847086-31847138)
[»] chr5 (24 HSPs)
chr5 (307-389)||(25627057-25627139)
chr5 (305-373)||(30883208-30883276)
chr5 (306-389)||(14285160-14285243)
chr5 (306-389)||(34984805-34984888)
chr5 (307-389)||(16773807-16773889)
chr5 (307-388)||(21549132-21549213)
chr5 (305-382)||(30109309-30109386)
chr5 (306-382)||(22737081-22737157)
chr5 (307-374)||(892483-892550)
chr5 (307-389)||(7918463-7918545)
chr5 (304-382)||(16436615-16436692)
chr5 (307-374)||(19043458-19043525)
chr5 (318-389)||(43442207-43442278)
chr5 (307-373)||(16457810-16457876)
chr5 (306-388)||(26078046-26078128)
chr5 (306-360)||(26598523-26598577)
chr5 (307-389)||(29075781-29075863)
chr5 (305-374)||(87432-87501)
chr5 (306-387)||(22020858-22020939)
chr5 (320-389)||(37258360-37258429)
chr5 (306-382)||(12877568-12877644)
chr5 (325-389)||(18595995-18596059)
chr5 (307-347)||(21589288-21589328)
chr5 (307-388)||(43230769-43230852)
[»] scaffold0126 (1 HSPs)
scaffold0126 (325-389)||(25341-25405)
[»] scaffold0258 (1 HSPs)
scaffold0258 (307-387)||(15319-15399)
[»] scaffold0180 (1 HSPs)
scaffold0180 (318-389)||(19956-20027)
[»] scaffold0118 (1 HSPs)
scaffold0118 (307-389)||(41627-41709)
[»] scaffold0194 (1 HSPs)
scaffold0194 (318-387)||(13042-13111)
[»] scaffold0101 (1 HSPs)
scaffold0101 (318-382)||(43333-43397)
[»] scaffold0517 (1 HSPs)
scaffold0517 (327-382)||(7727-7782)
[»] scaffold0299 (1 HSPs)
scaffold0299 (327-389)||(11548-11610)
[»] scaffold0004 (1 HSPs)
scaffold0004 (325-382)||(81565-81622)


Alignment Details
Target: chr1 (Bit Score: 145; Significance: 3e-76; HSPs: 37)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 145; E-Value: 3e-76
Query Start/End: Original strand, 111 - 389
Target Start/End: Complemental strand, 34461163 - 34460903
Alignment:
Q  111 taatttataacataatgttgtaaagcttctaaatcaaaacatatttttcattattaccatttaatctttcaactctaactctatgttgtaaagtatgaat 210  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||| | |||||||||||||| ||||||||||||||||||||||||||||||    
T  34461163 taatttataacataatgttctaaagcttctaaatcaaaacatatttttcattttaaccatttaatcttttaactctaactctatgttgtaaagtatgaat 34461064  T
Q  211 atgtt---aattatgagtaaccattgtatgcggaaaatattannnnnnnnagtttgactatttggttttaaggtcaagggttaaggtaaattcaagttaa 307  Q
    |||||   |||||||| |||||||||||                      ||| |||||||||||||||||||||||||||||| |||||||||||||||    
T  34461063 atgttgttaattatgaataaccattgta---------------------aagtatgactatttggttttaaggtcaagggttaaagtaaattcaagttaa 34460985  T
Q  308 acccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||||||||||||||||||| |||| ||||| ||||||||||||| || |||||||||||||| ||||||||||    
T  34460984 acccacttgagttggcttagtggtattgacttgagacctaaaagtgtgttcctcctgaaggtctcagattcaattatctctg 34460903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 325 - 388
Target Start/End: Original strand, 11063574 - 11063637
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||||||||||||||||||||||||||||| |||||||||| || ||||||| |||||    
T  11063574 tagtggtattggcttgggacctgaaagtgtgttcctcctcaaggtcttaggttcgattctctct 11063637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 8177259 - 8177176
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||| |||||||||| ||||||||||||||||||| |||  |||||| |||| |||||||| |||| ||||||| ||||||    
T  8177259 aaacccatttgagttggcctagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggttcgattctctctg 8177176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 36371469 - 36371552
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||| |||||| ||||||||||||||||| |||||  |||||| |||| |||||||||| || ||||||| ||||||    
T  36371469 aaacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctgaggttcgattctctctg 36371552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 9165271 - 9165189
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||| |||| ||||| ||||||| ||| ||| ||||||    
T  9165271 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctcaggttcaattctctctg 9165189  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 33700852 - 33700767
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||| |||||||| |||||| ||||||||||||||||| | |||  |||||| |||| ||||||||||||| ||||||| ||||||    
T  33700852 ttaagcccacttgggttggcctagtggtattggcttggaatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 33700767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 4566546 - 4566630
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||| |||||| ||||| ||||||||||| |||||  |||||| |||| |||| |||||||| ||||||| ||||||    
T  4566546 taaacccacttgggttggcctagtgatattggcttggaacctgggagtgtgctcctcctcagggtctcaggttcgattctctctg 4566630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 326 - 389
Target Start/End: Original strand, 10526842 - 10526905
Alignment:
Q  326 agtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||||||||||  ||| || |||| ||||||||||||||||||||| ||||||    
T  10526842 agtggtattggcttgggacctgggagtttgctcctcctcaaggtctcagattcgattctctctg 10526905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 311 - 389
Target Start/End: Complemental strand, 17745328 - 17745250
Alignment:
Q  311 cacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||| |||||| ||||||||||||||||||||||||  ||||| |||| ||| ||||||||  ||||||| ||||||    
T  17745328 cacttgggttggcctagtggtattggcttgggacctgagcgtgtgctcctcctcgaggtctcatgttcgattctctctg 17745250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 311 - 388
Target Start/End: Complemental strand, 14787408 - 14787331
Alignment:
Q  311 cacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||||| | ||||||||||| |||| ||||||| |||||||| || |||||||| |||| ||||||| |||||    
T  14787408 cacttgagttgacctagtggtattgacttgagacctgagagtgtgtttctcctcaaggtgtcaggttcgattctctct 14787331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 50901581 - 50901662
Alignment:
Q  307 aacccacttgagttggcttagtggta-ttggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||| |||||| |||||||| |||||||||||||||  |||||| |||| ||| |||||||| |||||||| ||||    
T  50901581 aacccacttgggttggcctagtggtaattggcttgggacctggtagtgtgctcctcctcgaggtctcaaattcgattctctc 50901662  T

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Target: chr1; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 9643865 - 9643805
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||||||||| |||  ||||||||| | ||||||||||||||||| ||||||||    
T  9643865 gtggtattggcttgggatctgggagtgtgttcatcctcaaggtctcagattcaattatctc 9643805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 31794340 - 31794276
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtct 371  Q
    |||||||||| |||||| |||||||||||||||||||| ||  |||||| |||| ||||||||||    
T  31794340 aacccacttgggttggcctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtct 31794276  T

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Target: chr1; HSP #14
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 16170054 - 16169979
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| ||| || | ||||||||| |||||||||||  ||||||||||| |||||||| |||| |||||||    
T  16170054 aacccacttgggttagcctggtggtattgacttgggacctgggagtgtgttcctcctcaaggtttcaggttcgatt 16169979  T

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Target: chr1; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 19528403 - 19528328
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||||| | ||||||||||||||||| ||   |||||| |||| ||||||||||||| |||||||    
T  19528403 aacccacttgggttggcctggtggtattggcttgggatctatgagtgtgctcctcctcaaggtctcaggttcgatt 19528328  T

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Target: chr1; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 52336839 - 52336768
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||| ||||||||||||||||||| |||  |||||| |||| || ||| |||||| ||||||||||||||    
T  52336839 gttggcctagtggtattggcttgggatctgggagtgtgctcctccttaagatctcaggttcgattatctctg 52336768  T

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Target: chr1; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 27430116 - 27430194
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||| | |||| ||| || ||||||| |||||||||| ||| | || |||||||||||||||||||||| |||||||    
T  27430116 ttaaactcccttgggttcgcctagtggtgttggcttgggtccttagagcgtgttccttctcaaggtctcaggttcgatt 27430194  T

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Target: chr1; HSP #18
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 318 - 380
Target Start/End: Original strand, 42787219 - 42787281
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcga 380  Q
    |||||| ||||||||||| |||||||| ||| |||| |||||| ||||| |||||||||||||    
T  42787219 gttggcctagtggtattgacttgggacttgagagtgcgttcctcctcaaagtctcagattcga 42787281  T

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Target: chr1; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 324 - 373
Target Start/End: Complemental strand, 21184447 - 21184398
Alignment:
Q  324 ttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    ||||||||||||||||||||||||  |||||| ||||||| |||||||||    
T  21184447 ttagtggtattggcttgggacctgcgagtgtgctccttctgaaggtctca 21184398  T

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Target: chr1; HSP #20
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 21547559 - 21547474
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||| ||||| |||||| |||||||||||||||||||| ||  || ||| |||| ||| |||| |||| ||||||| ||||||    
T  21547559 ttaaaccgacttgggttggcctagtggtattggcttgggacatgggagggtgctcctcctcgaggtttcaggttcgattctctctg 21547474  T

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Target: chr1; HSP #21
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 34228873 - 34228953
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||||||||||  | ||||| ||||||||||||||   |||||||||| |||||||||||||| || |||| ||||    
T  34228873 aaacccacttgagttggtctggtggtgttggcttgggacctcggagtgtgttcc-tctcaaggtctcaggttggattctctc 34228953  T

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Target: chr1; HSP #22
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 51814493 - 51814574
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||| |||||| |  |||||||| |||| || |||| |||||| |||| ||||||||||||| ||||||| ||||    
T  51814493 aaacccacttgggttggcctgatggtattgacttgagatctgagagtgtgctcctcctcaaggtctcaggttcgattctctc 51814574  T

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Target: chr1; HSP #23
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 2219992 - 2220052
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||||||| ||||||||||||| | || ||| ||||||||| ||||||| ||||    
T  2219992 gtggtattggcttggaacctgaaagtgtgcttctcctcgaggtctcaggttcgattctctc 2220052  T

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Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 6122793 - 6122869
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||| ||| |||| | ||||||||| |||||||||| ||  |||||| |||| ||||||||||||| |||||||    
T  6122793 aaacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 6122869  T

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Target: chr1; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 389
Target Start/End: Original strand, 8904412 - 8904496
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||| |||||| |||| |||||| |||||||  ||  |||||| |||| ||||||||||||  ||||||| ||||||    
T  8904412 taaacccacttgggttggcctagtagtattgacttgggatatgtgagtgtgctcctcctcaaggtctcaagttcgattctctctg 8904496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 382
Target Start/End: Complemental strand, 15786393 - 15786321
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||| |||||  |||| |||||||||||||| |||  |||||| |||| ||||||||||||| |||||||    
T  15786393 ccacttgggttggtctagtagtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 15786321  T

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Target: chr1; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 373
Target Start/End: Original strand, 40257397 - 40257465
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    |||||||||||| |||||| | |||||||||||||| ||||||  |||||| |||| ||| ||||||||    
T  40257397 taaacccacttgggttggcctggtggtattggcttgagacctgggagtgtgctcctcctcgaggtctca 40257465  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 304 - 371
Target Start/End: Complemental strand, 21268072 - 21268005
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtct 371  Q
    |||||||||||||||||||  |||| ||||||||||||||| ||  |||||| |||| ||| ||||||    
T  21268072 ttaaacccacttgagttgggctagtagtattggcttgggacttgggagtgtgctcctcctctaggtct 21268005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 24573487 - 24573432
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||||| || |||| | |||| ||||| ||||||||||||||||||||    
T  24573487 gtggtattggcttgagatctgagaatgtgctccttttcaaggtctcagattcgatt 24573432  T

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Target: chr1; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 37400294 - 37400349
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||||| |||||||||||||| |||| || |||||||||  |||||||    
T  37400294 gtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgatt 37400349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 377
Target Start/End: Original strand, 41508830 - 41508901
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagatt 377  Q
    ||||||||||| |||||| | |||||| ||| |||||| |||  |||||| |||| ||||||||||||||||    
T  41508830 aaacccacttgggttggcctggtggtactggtttgggatctgggagtgtgctcctcctcaaggtctcagatt 41508901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 319 - 389
Target Start/End: Original strand, 2799874 - 2799944
Alignment:
Q  319 ttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||| ||||||||| |||||| || |||  |||||| |||| ||||||||||||| ||||||| ||||||    
T  2799874 ttggcctagtggtataggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 2799944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 388
Target Start/End: Original strand, 9879449 - 9879519
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||| || |||||||||||||| |||| |||||  || | ||  |||||||||||||||||||||||    
T  9879449 gttggcttggttgtattggcttgggatctgagagtgtactcttccttgaggtctcagattcgattatctct 9879519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 325 - 355
Target Start/End: Complemental strand, 15310642 - 15310612
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtg 355  Q
    |||||||||||||||||||||||||||||||    
T  15310642 tagtggtattggcttgggacctgaaagtgtg 15310612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 331 - 388
Target Start/End: Complemental strand, 27567174 - 27567117
Alignment:
Q  331 tattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||| ||||| |||||| |||||| ||||  |||||||||||||||||||| |||||    
T  27567174 tattgacttggaacctgagagtgtgctcctcttcaaggtctcagattcgattttctct 27567117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 308 - 388
Target Start/End: Original strand, 44126396 - 44126476
Alignment:
Q  308 acccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||| |||||| | ||||||||| | |||||||||  |||||| |||| | | |||||||||||| |||| |||||    
T  44126396 acccacttgggttggcctggtggtattgacctgggacctgggagtgtgctcctccacgaggtctcagatttgattctctct 44126476  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 52030002 - 52029938
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||  ||||||||| |||| |||||   |||||| |||||||||||||||||| |||||||    
T  52030002 gttggctaggtggtattgacttgagacctaggagtgtgctccttctcaaggtctcaggttcgatt 52029938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 54; Significance: 6e-22; HSPs: 28)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 54; E-Value: 6e-22
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 19703565 - 19703488
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||| |||||| |||||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||    
T  19703565 taaacccacttgggttggcctagtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 19703488  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 16852337 - 16852415
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||||| |||||| |||||||||||||||||||||||  |||||| |||| ||| ||||||||| |||||||    
T  16852337 ttaaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 16852415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 968362 - 968442
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||||||||| | |||||||||||||||||||||  |||||| |||| ||| ||||||||| ||||||| ||||    
T  968362 aacccacttgagttggcctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 968442  T

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Target: chr8; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 309 - 387
Target Start/End: Original strand, 3624582 - 3624660
Alignment:
Q  309 cccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||| |||||| |||||||||||||||||||||||  |||||| ||||  |||||||||||| ||||||| ||||    
T  3624582 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcttcaaggtctcaggttcgattctctc 3624660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 18540298 - 18540380
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||  | || ||||||||||||| ||||||| ||||||    
T  18540298 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtacttctcctcaaggtctcaggttcgattctctctg 18540380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 309 - 374
Target Start/End: Original strand, 2203494 - 2203559
Alignment:
Q  309 cccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    |||||||| |||||| |||||||||||||||||||||||  |||||| |||| |||||||||||||    
T  2203494 cccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcag 2203559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 309 - 389
Target Start/End: Complemental strand, 8794419 - 8794339
Alignment:
Q  309 cccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||  ||||| ||||||||||||||||| ||||| ||||||| |||| |||| |||||||| ||||||| ||||||    
T  8794419 cccacttggattggcatagtggtattggcttggaacctggaagtgtgctcctcctcagggtctcaggttcgattctctctg 8794339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 28783059 - 28783135
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||| |||||||| |||||||||||||| ||||||  |||||| |||| ||||||||||||  |||||||    
T  28783059 aaacccacttgggttggcttggtggtattggcttgagacctgggagtgtgctcctcctcaaggtctcatgttcgatt 28783135  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 381
Target Start/End: Original strand, 12988427 - 12988502
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgat 381  Q
    |||||||||||  ||||| ||||||||||||||||| ||||| ||||||| |||| |||||||| |||| ||||||    
T  12988427 aaacccacttggattggcctagtggtattggcttggaacctggaagtgtgctcctcctcaaggtttcaggttcgat 12988502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 33017214 - 33017296
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| | ||  ||||||||||| ||||| ||||||| |||| ||||||||||||| ||||||| ||||||    
T  33017214 aacccacttgggttggccttgtcatattggcttggaacctggaagtgtgctcctcctcaaggtctcaggttcgattctctctg 33017296  T

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Target: chr8; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 18897164 - 18897241
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||| |||||| ||||||| |||| ||||||||| | |||||| |||| ||||||||||||  |||||||    
T  18897164 taaacccacttgggttggcctagtggtgttggtttgggaccttagagtgtgctcctcctcaaggtctcatgttcgatt 18897241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 12281514 - 12281574
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||||||||||||||| ||||||  ||| ||| ||||||||||||||||| ||||    
T  12281514 gtggtattggcttgggacctgagagtgtgcccctcctcgaggtctcagattcgattttctc 12281574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 327 - 387
Target Start/End: Complemental strand, 30774792 - 30774732
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||| |||||| ||| |||||||||||| ||| ||||||||||||||||| ||||    
T  30774792 gtggtattggtttgggatctggaagtgtgttcctcctcgaggtctcagattcgattttctc 30774732  T

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Target: chr8; HSP #14
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 374
Target Start/End: Complemental strand, 44780191 - 44780123
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    ||||||||||| |||||| |||||| ||||||||||||| ||  |||||| |||| |||||||||||||    
T  44780191 aaacccacttgggttggcctagtggcattggcttgggacttgggagtgtgctcctcctcaaggtctcag 44780123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 20994534 - 20994451
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttcct-tctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| ||||||||||| |||||||||||  |||||| ||||  ||||| |||||||  |||||||||||||    
T  20994534 aacccacttgggttggcctagtggtattgacttgggacctgggagtgtgctcctccctcaaagtctcaggatcgattatctctg 20994451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 28566104 - 28566166
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaagg 368  Q
    ||||||||||| |||| | |||||||||||| ||||||||| | |||||| ||||||||||||    
T  28566104 aaacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaagg 28566166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 306 - 368
Target Start/End: Original strand, 28573727 - 28573789
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaagg 368  Q
    ||||||||||| |||| | |||||||||||| ||||||||| | |||||| ||||||||||||    
T  28573727 aaacccacttgggttgacctagtggtattggtttgggaccttagagtgtgctccttctcaagg 28573789  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 374
Target Start/End: Original strand, 5264542 - 5264611
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    |||||||||||| |||||| ||||||||||||||||| |||||  | |||| |||| ||| |||||||||    
T  5264542 taaacccacttgggttggcctagtggtattggcttggaacctgggaatgtgctcctcctcgaggtctcag 5264611  T

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Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 340 - 389
Target Start/End: Complemental strand, 24675555 - 24675506
Alignment:
Q  340 gggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||| |||| |||||| |||||||||||||||||||||||||| ||||||    
T  24675555 gggatctgagagtgtgctccttctcaaggtctcagattcgattttctctg 24675506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 374
Target Start/End: Original strand, 4830486 - 4830554
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    ||||||||||| |||||| | |||||||| | |||||| |||| ||||||||||| ||| |||||||||    
T  4830486 aaacccacttgggttggcctggtggtatttgtttgggatctgagagtgtgttcctcctcgaggtctcag 4830554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 6536538 - 6536602
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||||||||||   |||||| |||| ||||||||||||| ||| ||| ||||||    
T  6536538 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcaattctctctg 6536602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 347
Target Start/End: Complemental strand, 23874458 - 23874418
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctg 347  Q
    |||||||||| |||||| |||||||||||||||||||||||    
T  23874458 aacccacttgggttggcctagtggtattggcttgggacctg 23874418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 6436631 - 6436556
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||| | | |||||||||||||||||| |   |||||| |||| | |||||||||||||||||||    
T  6436631 aacccacttgggttgccctggtggtattggcttgggacttaggagtgtgctcctccgcaaggtctcagattcgatt 6436556  T

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Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 11819776 - 11819851
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||| ||| |||| | ||||||||| |||||||||| ||  |||||| |||| ||||||||||||| |||||||    
T  11819776 aacccatttgggttgccctagtggtataggcttgggacttgggagtgtgctcctcctcaaggtctcaggttcgatt 11819851  T

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Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 26688865 - 26688932
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    |||||||||| |||||| | ||||| ||||||||||||||   |||||| |||| |||||||||||||    
T  26688865 aacccacttgggttggcctggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctcag 26688932  T

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Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 35690129 - 35690058
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||| ||||||||||||||||||| |||   || || |||| ||||||||||||| ||||||| ||||||    
T  35690129 gttggcctagtggtattggcttgggatctgggtgtttgctcctcctcaaggtctcaggttcgattctctctg 35690058  T

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Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 378
Target Start/End: Complemental strand, 14701493 - 14701422
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattc 378  Q
    |||| ||||||||||||||||| || ||| |  ||||||| || ||||||| |||||||||| |||||||||||    
T  14701493 taaatccacttgagttggcttactgatatgg--ttgggacatgcaagtgtgctccttctcaaagtctcagattc 14701422  T

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Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 308 - 382
Target Start/End: Complemental strand, 29858124 - 29858050
Alignment:
Q  308 acccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||  ||||| | ||||||||||||||||||| |  |||||| |||| ||| ||||||||| |||||||    
T  29858124 acccacttggattggcctggtggtattggcttgggaccagggagtgtgctcctcctcgaggtctcaggttcgatt 29858050  T

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Target: chr7 (Bit Score: 51; Significance: 4e-20; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 26459486 - 26459404
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||| |||| ||||||||||||| ||||||| ||||||    
T  26459486 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 26459404  T

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Target: chr7; HSP #2
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 33869521 - 33869439
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||| ||||||||||| |||||| ||||||| |||||||||||||||| | ||||||| ||||||    
T  33869521 aacccacttgggttggcctagtagtattggcttgagacctggaagtgtgctccttctcaaggtctctggttcgattctctctg 33869439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 305 - 387
Target Start/End: Complemental strand, 17041090 - 17041008
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||||| |||||  |||||| |||||||||||| ||| ||||||| |||| ||||||||||||| ||||||| ||||    
T  17041090 taaacccacttgggttggtctagtggcattggcttgggatctggaagtgtgctcctcctcaaggtctcaggttcgattctctc 17041008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 43215183 - 43215265
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||||| |||||  ||||||||||||||||||||||   |||||| |||| ||||||||||||| ||||||| |||||    
T  43215183 aaacccacttgggttggtctagtggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctct 43215265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 296 - 387
Target Start/End: Complemental strand, 45709797 - 45709704
Alignment:
Q  296 aattcaagtt--aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||  ||||||| ||| |||||| |||||||||| |||||||| |||| |||||| |||| ||| ||||||||| ||||||||||||    
T  45709797 aattcaagtttgaaacccatttgggttggcctagtggtattagcttgggatctgagagtgtgctcctcctcgaggtctcaggttcgattatctc 45709704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 39631844 - 39631925
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||  | |||| ||||||||||||| ||||||| |||||    
T  39631844 aacccacttgggttggcctagtggtattggcttgggacctgggagtaagctcctcctcaaggtctcaggttcgattctctct 39631925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 387
Target Start/End: Original strand, 14058250 - 14058333
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||| ||||||||||| | ||||||||| ||||| |||||| |||||| || | ||||||||||||| ||||||| ||||    
T  14058250 ttaaacccgcttgagttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14058333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 304 - 387
Target Start/End: Original strand, 14368278 - 14368361
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||| ||||||||||| | ||||||||| ||||| |||||| |||||| || | ||||||||||||| ||||||| ||||    
T  14368278 ttaaacccgcttgagttggcctggtggtattgtcttggaacctgagagtgtgctcatcctcaaggtctcaggttcgattctctc 14368361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 39499795 - 39499720
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||||||||  | |||||||||  |||||||    
T  39499795 aacccacttgggttggcctagtggtattggcttgggacctgtgagtgtgttcctctttaaggtctcatgttcgatt 39499720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 385
Target Start/End: Complemental strand, 3280561 - 3280484
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatc 385  Q
    |||||||||| |||| | | ||||||||||||||||||| || |||||| |||| |||||||||||| |||||||||||    
T  3280561 aacccacttgggttgacatggtggtattggcttgggacccgagagtgtgctcctcctcaaggtctca-attcgattatc 3280484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 306 - 388
Target Start/End: Original strand, 23552117 - 23552199
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||||| |||||| ||||| ||||| |||||||||||  |||||| |||| ||||||||||||  ||||||| |||||    
T  23552117 aaacccacttgggttggcctagtgctattgacttgggacctgggagtgtgctcctcctcaaggtctcaagttcgattctctct 23552199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 373
Target Start/End: Complemental strand, 25021411 - 25021345
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||| |||| ||||| ||||||    
T  25021411 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaagtctca 25021345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 48771938 - 48772016
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatc 385  Q
    |||||||||| |||||||| ||||||||||||||||| |||  |||||| |||| ||  ||||||||| ||||||||||    
T  48771938 aacccacttgggttggcttggtggtattggcttgggatctgggagtgtgctcctccttgaggtctcaggttcgattatc 48772016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 348
Target Start/End: Original strand, 26199509 - 26199550
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctga 348  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  26199509 aacccacttgagttggcctagtggtattggcttgggacctga 26199550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 318 - 387
Target Start/End: Complemental strand, 41519175 - 41519106
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||| ||||| || ||||||||||  | | |||||| |||||||||||||||||||||||||||||||    
T  41519175 gttggcctagtgatactggcttgggatttaagagtgtgctccttctcaaggtctcagattcgattatctc 41519106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 33222388 - 33222452
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||||||||||| ||||||  || | ||||||||||||| ||||||| ||||||    
T  33222388 tagtggtattggcttgggacctggaagtgtactcatcctcaaggtctcaggttcgattctctctg 33222452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 38374676 - 38374600
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||| |||||| | ||||| |||||||||||||| | |||||| |||| |||||||||| || |||||||    
T  38374676 aaacccacttgggttggcgtggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtcttaggttcgatt 38374600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 310 - 389
Target Start/End: Complemental strand, 4566501 - 4566422
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||| |||||| ||||||||||| ||| ||||||   ||||| ||||||||||||||||||| || |||| ||||||    
T  4566501 ccacttgggttggcctagtggtattgacttcggaccttggagtgtattccttctcaaggtctcaggtttgattctctctg 4566422  T

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Target: chr7; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 22760863 - 22760938
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||||  | ||||||||| |||||||||||  |||||| |||| ||||||||||||| |||||||    
T  22760863 aacccacttgggttggtctggtggtattgacttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 22760938  T

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Target: chr7; HSP #20
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 25655305 - 25655222
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||| || ||||| |||||||||||| ||||||| |||  |||||| |||| |||||||| |||| ||||||| ||||||    
T  25655305 aaacccacctgggttggtttagtggtattgacttgggatctgtgagtgtgatcctcctcaaggtttcaggttcgattctctctg 25655222  T

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Target: chr7; HSP #21
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 30442488 - 30442563
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| ||||||  ||||||||||||||||||||||  ||| || |||| |||||||||| || |||||||    
T  30442488 aacccacttgggttggcccagtggtattggcttgggacctgggagtttgctcctcctcaaggtctgaggttcgatt 30442563  T

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Target: chr7; HSP #22
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 30579334 - 30579417
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||| |||||| | |||||||||||||| ||||||  |||||   ||| ||||||||||||| ||||||| ||||||    
T  30579334 aaacccacttgggttggcctggtggtattggcttgagacctgggagtgtccacctcctcaaggtctcaggttcgattttctctg 30579417  T

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Target: chr7; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 42836077 - 42836010
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||| || | ||||||| |||||    
T  42836077 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcttcctcaaggcctcag 42836010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 37094749 - 37094830
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||||| ||||| ||||| ||| || |||||| ||| ||||||| |||| |||||||||||| ||| |||| |||||    
T  37094749 aacccacttgaattggcatagtgatataggtttgggatctggaagtgtgatcctcctcaaggtctcacatttgattctctct 37094830  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 5273666 - 5273602
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtct 371  Q
    |||||||||| |||||| | ||||| |||||||||||||| | |||||| |||| ||||||||||    
T  5273666 aacccacttgggttggcctggtggtgttggcttgggaccttagagtgtgctcctcctcaaggtct 5273602  T

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Target: chr7; HSP #26
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 24438325 - 24438241
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||| | ||| |||| |||||||||||||| ||||||| ||  |||||| || |||| ||||| |||||||||||| ||||||    
T  24438325 taaacctatttgggttgacttagtggtattggtttgggacttgggagtgtgctctttcttaaggtttcagattcgattctctctg 24438241  T

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Target: chr7; HSP #27
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 42711957 - 42712033
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||| |||||| ||||||||||||||||| |||||| || ||  |||||| |||| ||||||||||||  |||||||    
T  42711957 aaactcacttgggttggcttagtggtattagcttggtacatgggagtgtgctcctcctcaaggtctcatgttcgatt 42712033  T

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Target: chr7; HSP #28
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 20335907 - 20335832
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||||  ||| |||||||||||||||| ||  |||||| |||| ||| ||||||||| |||||||    
T  20335907 aacccacttgggttggtctagaggtattggcttgggacttgggagtgtgctcctcctcgaggtctcaggttcgatt 20335832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 328 - 387
Target Start/End: Complemental strand, 20952204 - 20952145
Alignment:
Q  328 tggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||| ||||||||||  |||||| |||| |||||  |||||||||||||||||||    
T  20952204 tggtattggtttgggacctgggagtgtgctcctcctcaaaatctcagattcgattatctc 20952145  T

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Target: chr7; HSP #30
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 43590907 - 43590982
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||| ||| |||||| | |||||||||||||||||| ||  |||||| |||| ||||| ||||||| |||||||    
T  43590907 aacccagttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcaatgtctcaggttcgatt 43590982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 2962460 - 2962541
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||  |||||||||||| |||| |||||  |||||| |||| |||||| |||||| ||||||| ||||||    
T  2962460 aacccacttg-gttggtctagtggtattggtttggaacctgtgagtgtgctcctcctcaagatctcaggttcgattctctctg 2962541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 311 - 373
Target Start/End: Complemental strand, 19612711 - 19612650
Alignment:
Q  311 cacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    |||||||||||| |||||||| ||||||||||| ||  ||||||| ||| |||||||||||||    
T  19612711 cacttgagttggtttagtggtgttggcttgggatcttgaagtgtgctcc-tctcaaggtctca 19612650  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 385
Target Start/End: Original strand, 31835192 - 31835270
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatc 385  Q
    |||||||||| |||||| | ||||| ||||||||||  ||   |||||| |||| ||||||||||||| ||||||||||    
T  31835192 aacccacttgggttggcctggtggtgttggcttgggtgcttggagtgtgctcctcctcaaggtctcaggttcgattatc 31835270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 373
Target Start/End: Original strand, 48716280 - 48716346
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    ||||||||| |||||||||||| |||||| ||||| | |||  ||||||||||| || |||||||||    
T  48716280 aacccacttaagttggcttagtagtattgacttggaatctgggagtgtgttcctccttaaggtctca 48716346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 380
Target Start/End: Original strand, 7801180 - 7801253
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcga 380  Q
    ||||||||||  ||||| | ||||||||| |||||||||||  |||||| ||||  |||||||||||| |||||    
T  7801180 aacccacttggtttggcctggtggtattgacttgggacctgggagtgtgctcctcttcaaggtctcaggttcga 7801253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 11721038 - 11720961
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||| ||||  |||||| | |||||||||||||||||||||  | |||| |||| || ||||| ||||||||||||    
T  11721038 taaaccaacttcggttggcctggtggtattggcttgggacctgggaatgtgctcctccttaaggtatcagattcgatt 11720961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 18363696 - 18363777
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||| |||||| ||||||||| |||||| ||  ||  |||||| |||| ||||||||||||| || |||| |||||    
T  18363696 aacccacttgggttggcctagtggtataggcttgagatttgggagtgtgctcctcctcaaggtctcaggtttgattctctct 18363777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 382
Target Start/End: Original strand, 21877814 - 21877883
Alignment:
Q  313 cttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||| ||||||||||| |||||||||||  || ||| |||| || |||||||||  |||||||    
T  21877814 cttgagttggcctagtggtattgacttgggacctgggagggtgctcctccttaaggtctcacgttcgatt 21877883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 29196905 - 29196986
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||| ||||||| | ||||| |||||| ||||||| || ||||||| || |  |||||||||||| ||||||| |||||    
T  29196905 aacccacatgagttgacctagtgatattggtttgggacttggaagtgtgctcgtcttcaaggtctcaggttcgattttctct 29196986  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 33460500 - 33460423
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttct-caaggtctcagattcgatt 382  Q
    |||||||| || ||||| || |||||||||| |||||||||   |||||| |||| || |||||||||||||||||||    
T  33460500 aaacccacctgggttggtttggtggtattggtttgggacctaggagtgtggtcctccttcaaggtctcagattcgatt 33460423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 11700183 - 11700247
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||| ||||||||| ||| ||| ||| || |||| ||||||||||||| ||||||| ||||||    
T  11700183 tagtggcattggcttgagacttgagagtttgctcctcctcaaggtctcaggttcgattctctctg 11700247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 313 - 389
Target Start/End: Original strand, 21558134 - 21558210
Alignment:
Q  313 cttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||| |||||||| || |||||| ||||| |||| | | |||| |||| ||||||||||||| ||||||| ||||||    
T  21558134 cttgtgttggcttggtagtattgacttggaacctaagaatgtgctcctcctcaaggtctcaggttcgattctctctg 21558210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 25956368 - 25956305
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtct 371  Q
    |||||| ||| |||||| ||||||||||||||||||||||   |||||| ||| |||||||||||    
T  25956368 aacccatttgggttggcctagtggtattggcttgggaccttggagtgtgctcc-tctcaaggtct 25956305  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 51; Significance: 4e-20; HSPs: 31)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 37109427 - 37109345
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||| |||| ||||||||||||| ||||||| ||||||    
T  37109427 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 37109345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 46545711 - 46545793
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||||||||||||||| ||||||| |||||| |||| |||||| |||||||||||||| ||||||    
T  46545711 aacccacttgggttggcctagtggtattggcttgagacctgagagtgtgctcctcctcaagatctcagattcgattttctctg 46545793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 1730565 - 1730483
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||| | |||||||||||||||||||||||| |||||| ||||  |||| ||||||||||| ||| ||||||    
T  1730565 aacccacttgggttgacctagtggtattggcttgggacctgagagtgtgctcctcttcaaagtctcagattctattctctctg 1730483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 7949531 - 7949448
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||| | |||| ||| ||||||||||||||||||   |||||| |||| ||||||||||||| ||||||| ||||||    
T  7949531 aaacccacttgggctggcctagcggtattggcttgggacctcggagtgtgctcctcctcaaggtctcaggttcgattctctctg 7949448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 31759734 - 31759659
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| ||||   |||||||||||||||||||| ||  |||||| |||| |||||||||||||||||||||    
T  31759734 aacccacttgggttgatctagtggtattggcttgggacttgggagtgtgctcctcctcaaggtctcagattcgatt 31759659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 10047998 - 10048062
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||||||||||||| | ||| || ||||||||| |||||||| ||||||| ||||||    
T  10047998 tagtggtattggcttgggacctaagagtatgctccttctcatggtctcaggttcgattctctctg 10048062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 324 - 388
Target Start/End: Original strand, 23377973 - 23378037
Alignment:
Q  324 ttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||| |||||||||||||||||  |||||| |||| ||||||||||||| ||||||| |||||    
T  23377973 ttagtgttattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgattctctct 23378037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 377
Target Start/End: Original strand, 32003087 - 32003159
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagatt 377  Q
    ||||||||||||||||| ||| |||||||||| ||| || ||||||||||| || |  |||||||||||||||    
T  32003087 taaacccacttgagttgacttggtggtattggtttgagatctgaaagtgtgctcatcttcaaggtctcagatt 32003159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 37274536 - 37274453
Alignment:
Q  307 aacccacttgagttggcttagtggta-ttggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||| ||| |||||||||||||||  |||||| |||| |||||||||| || ||||||| ||||||    
T  37274536 aacccacttgggttggcctagtcgtaattggcttgggacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 37274453  T

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Target: chr4; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 55427276 - 55427201
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||||| | |||||||||||||||||||||  ||| || |||| ||| ||||||||| |||||||    
T  55427276 aacccacttgggttggcctggtggtattggcttgggacctgggagtctgctcctgctcgaggtctcaggttcgatt 55427201  T

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Target: chr4; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 310 - 388
Target Start/End: Complemental strand, 7292871 - 7292793
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||| |||||  ||||||||||||||||| |||||  |||||| |||| ||||| ||||||| ||||||| |||||    
T  7292871 ccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaagtctcaggttcgattctctct 7292793  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 327 - 389
Target Start/End: Complemental strand, 11592209 - 11592147
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||| |||||||||||| |||||| |||| ||| |||||| || ||||||||||||||    
T  11592209 gtggtattgccttgggacctgagagtgtgctcctcctccaggtcttaggttcgattatctctg 11592147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 389
Target Start/End: Complemental strand, 19680867 - 19680782
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||||  ||||| |||||||||| ||||||||| ||  |||||| || | |||||||||| || ||||||| ||||||    
T  19680867 ttaaacccacttggattggcctagtggtattcgcttgggacttgggagtgtgctcttcctcaaggtcttaggttcgattctctctg 19680782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 38869786 - 38869843
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||||||||||| |||  |||||| |||| ||||||||||||| |||||||    
T  38869786 tagtggtattggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 38869843  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 304 - 388
Target Start/End: Original strand, 4923547 - 4923631
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||| ||||| |||||| ||||| |||||| |||| || |||||||||| || |  |||||||||||||||| ||| |||||    
T  4923547 ttaaacctacttgggttggcctagtgttattggtttggaacttgaaagtgtgctcatcgtcaaggtctcagattcaattctctct 4923631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 312 - 388
Target Start/End: Complemental strand, 13265179 - 13265103
Alignment:
Q  312 acttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||||| ||| |||||||||||||||||||  | |||| |||| || | ||| |||||||||||| |||||    
T  13265179 acttgagttggcctagaggtattggcttgggacctgggaatgtgctcctccttatggtttcagattcgattctctct 13265103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 16581711 - 16581775
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||||| |||||  ||| || |||| ||||||||||||| ||| ||||||||||    
T  16581711 tagtggtattggcttggaacctgggagtctgctcctcctcaaggtctcaggttctattatctctg 16581775  T

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Target: chr4; HSP #18
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 20770911 - 20770991
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||| |||||| ||| | ||||||||||  | ||| | |||||||||||||||||||||||  ||||||| ||||    
T  20770911 aacccacttgcgttggcctagggatattggcttgaaatctggatgtgtgttccttctcaaggtctcaagttcgattctctc 20770991  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 37720291 - 37720215
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||| |||||| | ||| |||||||||||||||||  ||||||  ||| ||||||||| ||| |||||||    
T  37720291 aaacccacttgggttggcctggtgttattggcttgggacctgggagtgtgcccctcctcaaggtcccaggttcgatt 37720215  T

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Target: chr4; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 310 - 366
Target Start/End: Original strand, 41683752 - 41683808
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaa 366  Q
    ||||||| |||| | ||||||||||||||||| |||||| |||||| ||||||||||    
T  41683752 ccacttgggttgacctagtggtattggcttggaacctgagagtgtgctccttctcaa 41683808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 19238653 - 19238578
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||||| | |||||||||||||||||| ||  |||||| |||| ||| ||||||| | |||||||    
T  19238653 aacccacttgggttggcctggtggtattggcttgggacttgggagtgtgctcctcctcgaggtctcgggttcgatt 19238578  T

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Target: chr4; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 310 - 388
Target Start/End: Complemental strand, 33438551 - 33438473
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||| |||||  ||||||||||||||||| ||||| |||| |||| || |||||  | |||||||| |||||||||    
T  33438551 ccacttgggttggtctagtggtattggcttggaacctggaagtatgtttctcctcaaaatttcagattcaattatctct 33438473  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 2622475 - 2622389
Alignment:
Q  307 aacccacttgagttggcttagtggtatt----ggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| ||||||||||    |||||||||||||  |||||| |||| ||| | ||||||| ||||||| ||||||    
T  2622475 aacccacttgggttggcctagtggtattaattggcttgggacctgggagtgtgctcctcctccatgtctcaggttcgattctctctg 2622389  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Original strand, 8714697 - 8714754
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||| |||||| |||| || |||||||| |||||||| ||||||| ||||    
T  8714697 tagtggtattggtttgggatctgagagcgtgttcctcctcaaggtttcagatttgatt 8714754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 380
Target Start/End: Complemental strand, 9241101 - 9241028
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcga 380  Q
    |||||||||| |||||| | ||||||||||||||||| |||  |||||| |||| ||| |||||| || |||||    
T  9241101 aacccacttgggttggcctggtggtattggcttgggatctggtagtgtgctcctgctcgaggtctgaggttcga 9241028  T

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Target: chr4; HSP #26
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 343
Target Start/End: Complemental strand, 27965587 - 27965550
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttggga 343  Q
    ||||||||||| |||||| |||||||||||||||||||    
T  27965587 aaacccacttgggttggcctagtggtattggcttggga 27965550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 330 - 387
Target Start/End: Complemental strand, 42644963 - 42644906
Alignment:
Q  330 gtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||| ||||||| |||| ||||||||| | ||||| ||||||| ||||||||||||    
T  42644963 gtattgacttgggatctgagagtgtgttcttcctcaaagtctcaggttcgattatctc 42644906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 318 - 387
Target Start/End: Complemental strand, 49576959 - 49576890
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||| | ||||||||||||| |||| ||  |||||| |||| ||||||||||||| ||||||| ||||    
T  49576959 gttggcctggtggtattggctttggacttgggagtgtgctcctcctcaaggtctcaggttcgattctctc 49576890  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 303 - 343
Target Start/End: Complemental strand, 14350346 - 14350306
Alignment:
Q  303 gttaaacccacttgagttggcttagtggtattggcttggga 343  Q
    |||||||||||||||||||| |||||||| |||| ||||||    
T  14350346 gttaaacccacttgagttgggttagtggtgttggtttggga 14350306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 318 - 386
Target Start/End: Complemental strand, 21775987 - 21775919
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatct 386  Q
    ||||| || |||||||| | || ||| ||||||||||| |||| ||||||||||||  |||||||||||    
T  21775987 gttggtttggtggtattagtttaggatctgaaagtgtgctcctcctcaaggtctcaagttcgattatct 21775919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 51250599 - 51250523
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||| |||||| | ||||||||||||||||| |||  |||||| |||  |||||| |||||  |||||||    
T  51250599 aaacccacttgggttggcctggtggtattggcttgggatctgggagtgtgctccgcctcaagatctcaagttcgatt 51250523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 49; Significance: 6e-19; HSPs: 36)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 49; E-Value: 6e-19
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 37480074 - 37480150
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||| |||||| | |||||||||||||||||||||| |||||| |||| ||||||||||||| |||||||    
T  37480074 aaacccacttgggttggcctggtggtattggcttgggacctgagagtgtgctcctcctcaaggtctcaggttcgatt 37480150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 11251086 - 11251169
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||  ||||||||||||||||||||||||||| || ||||||| |||| ||||||||||||| || |||| ||||||    
T  11251086 aaacccacttaggttggcttagtggtattggcttgggacttggaagtgtgctcctcctcaaggtctcaggtttgattctctctg 11251169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 42327471 - 42327396
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||| |||| ||||||||||||| |||||||    
T  42327471 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 42327396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 305 - 371
Target Start/End: Original strand, 42602552 - 42602618
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtct 371  Q
    |||||||||||| |||||| |||||||||||||||||||||||  |||||| |||||||||||||||    
T  42602552 taaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctccttctcaaggtct 42602618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 46; E-Value: 4e-17
Query Start/End: Original strand, 305 - 382
Target Start/End: Original strand, 29503269 - 29503346
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||| |||||| |||||||||||| ||||||||||  |||||| |||| ||||||||||||| |||||||    
T  29503269 taaacccacttgggttggcctagtggtattggtttgggacctgggagtgtgctcctcctcaaggtctcaggttcgatt 29503346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 11738121 - 11738038
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||||| |||||||||||| || | || |||| ||||||||||| ||||| || |||| ||||||||||||||    
T  11738121 aaacccacttgagttggattagtggtattgactagagatctgagagtgtgttcctcctcaaagtttcaggttcgattatctctg 11738038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 42; E-Value: 0.000000000000009
Query Start/End: Original strand, 309 - 382
Target Start/End: Complemental strand, 12086203 - 12086130
Alignment:
Q  309 cccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||| ||||||| | ||||||||||||||||||||| ||||||| |||| ||||||||||| | |||||||    
T  12086203 cccacttaagttggcctggtggtattggcttgggacctggaagtgtgctcctcctcaaggtctcgggttcgatt 12086130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 42922414 - 42922497
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctc-aaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| ||||||||||||||||| |||||  |||||| |||| ||| |||||||||| ||||||| ||||||    
T  42922414 aacccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaaggtctcaggttcgattctctctg 42922497  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 19244109 - 19244191
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||  || |||||||| |||||||||||| |||||| |||| | ||||||||||| ||||||| ||||||    
T  19244109 aacccacttgggttggtctactggtattgacttgggacctgagagtgtgctcctccccaaggtctcaggttcgattctctctg 19244191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 374
Target Start/End: Complemental strand, 34041667 - 34041597
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    ||||||||||||| |||||| ||||||||||| ||| ||| |||| |||||| |||| |||||||||||||    
T  34041667 ttaaacccacttgggttggcctagtggtattgacttaggatctgagagtgtgctcctcctcaaggtctcag 34041597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 304 - 389
Target Start/End: Original strand, 1729813 - 1729898
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||| |||||  |||||||||||||||||||| ||  |||||| |||| ||| |||||| ||||| |||| ||||||    
T  1729813 ttaaacccacttgggttgggctagtggtattggcttgggacttgggagtgtgctcctcctctaggtcttagatttgattctctctg 1729898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 4060292 - 4060208
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||| |||||| |||||||||||| |||  |||||| |||||| | || |||||| |||||| ||||||| ||||||    
T  4060292 taaacccacttgggttggcctagtggtattggtttgaaacctgagagtgtgcttctcctcaagatctcaggttcgattctctctg 4060208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 39714991 - 39715067
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||| |||||| | ||||||||| |||||||||||  |||||| |||| ||| ||||||||| |||||||    
T  39714991 aaacccacttgggttggcatggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgatt 39715067  T

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Target: chr2; HSP #14
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 40416466 - 40416384
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| ||||||||||| ||||| |||||  ||| || |||| || |||||||||| ||||||| ||||||    
T  40416466 aacccacttgggttggcctagtggtattgacttggaacctgggagtatgctcctccttaaggtctcaggttcgattctctctg 40416384  T

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Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 5147755 - 5147674
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||| |||||  ||||||||||| |||| || |||  ||| || |||||||||||||||| ||||||||| |||||    
T  5147755 aacccacttgggttggtctagtggtattgacttgagatctgggagtatgctccttctcaaggtctcggattcgattctctct 5147674  T

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Target: chr2; HSP #16
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 7799112 - 7799031
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||| |||| | | |||||||||||||||||| ||  |||||| |||| ||| || |||||||||||||| ||||    
T  7799112 aaacccacttgggttgtcctggtggtattggcttgggacttgggagtgtgctcctcctcgagatctcagattcgattctctc 7799031  T

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Target: chr2; HSP #17
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 389
Target Start/End: Complemental strand, 16918653 - 16918572
Alignment:
Q  308 acccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||| |||||| |||||||||||| |||||| |||  |||||| |||| |||||||||| || || |||| ||||||    
T  16918653 acccacttgggttggcctagtggtattggtttgggatctgggagtgtgctcctcctcaaggtcttaggttggattctctctg 16918572  T

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Target: chr2; HSP #18
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 305 - 389
Target Start/End: Complemental strand, 33569937 - 33569852
Alignment:
Q  305 taaacccacttgagttggcttagtggt-attggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||| || |||||||||||||| |||||||| |||| || ||||||| || | ||| ||||||||| ||||||| ||||||    
T  33569937 taaacccacatgggttggcttagtggtaattggcttaggacttggaagtgtgctcttcctcgaggtctcaggttcgattctctctg 33569852  T

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Target: chr2; HSP #19
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 308 - 373
Target Start/End: Complemental strand, 37756046 - 37755981
Alignment:
Q  308 acccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    ||||||||| |||||||| |||||||||||||||||||||  | |||| |||| ||| ||||||||    
T  37756046 acccacttgggttggcttggtggtattggcttgggacctgggaatgtgctcctactcgaggtctca 37755981  T

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Target: chr2; HSP #20
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 331 - 387
Target Start/End: Complemental strand, 4262354 - 4262298
Alignment:
Q  331 tattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||||||||||  |||||| |||| ||||||||||||| ||||||| ||||    
T  4262354 tattggcttgggacctggcagtgtgctcctcctcaaggtctcaggttcgattctctc 4262298  T

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Target: chr2; HSP #21
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 25931005 - 25931081
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||| ||| |||||| | |||||||||| ||||||||||| ||||||||  | ||| | |||||||||||||||    
T  25931005 aaacccatttgggttggcctggtggtattggtttgggacctgagagtgtgtttatcctcgaagtctcagattcgatt 25931081  T

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Target: chr2; HSP #22
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 12994452 - 12994377
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||| ||||||||||  ||||||||||| |||||||||||  |||||| |||| || |||||||||  |||||||    
T  12994452 aacccgcttgagttggtctagtggtattgacttgggacctgggagtgtgctcctccttaaggtctcaagttcgatt 12994377  T

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Target: chr2; HSP #23
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 14500276 - 14500359
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||  ||||| |||||||||  ||||| || |||  |||||| |||| ||| ||||||||||||||||| ||||||    
T  14500276 aaacccacttggtttggcctagtggtataagcttgagatctgggagtgtgctcctcctctaggtctcagattcgattctctctg 14500359  T

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Target: chr2; HSP #24
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Original strand, 21213789 - 21213844
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||||||||||||  ||||||||||| ||  ||||||||| |||||||    
T  21213789 gtggtattggcttgggacctgggagtgtgttcctccttgaggtctcaggttcgatt 21213844  T

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Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 23052599 - 23052524
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||  |||||| | |||||||||||||||||| ||  |||||| | || ||||||||||||| |||||||    
T  23052599 aacccacttaggttggcctggtggtattggcttgggacttgggagtgtgcttctcctcaaggtctcaggttcgatt 23052524  T

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Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 373
Target Start/End: Original strand, 30359657 - 30359720
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    ||||||| |||||||| ||||| ||||||||||||||   |||||| |||| ||||||||||||    
T  30359657 ccacttgggttggcttggtggtgttggcttgggaccttggagtgtgctcctcctcaaggtctca 30359720  T

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Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 306 - 385
Target Start/End: Complemental strand, 38854539 - 38854460
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatc 385  Q
    ||||||| ||| |||||||||||||| ||| |||| ||||||| |||||    || ||||||||||||| ||||||||||    
T  38854539 aaacccatttgtgttggcttagtggttttgacttgagacctgagagtgtacctctcctcaaggtctcaggttcgattatc 38854460  T

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Target: chr2; HSP #28
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 307 - 388
Target Start/End: Original strand, 11062360 - 11062441
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||| |||||| ||||| ||||||||||| || ||  |||||| | || ||||||||||||| || |||| |||||    
T  11062360 aacccacttgggttggcctagtgatattggcttggaacttgggagtgtgcttctcctcaaggtctcaggtttgattctctct 11062441  T

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Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 311 - 360
Target Start/End: Original strand, 24191842 - 24191891
Alignment:
Q  311 cacttgagttggcttagtggtattggcttgggacctgaaagtgtgttcct 360  Q
    ||||||||||||| |  ||||||||||||||||||||| |||||| ||||    
T  24191842 cacttgagttggcctgatggtattggcttgggacctgagagtgtgctcct 24191891  T

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Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 30808725 - 30808648
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||| |||||  | ||| |||||||||| ||||||| | | || |||| ||||||||||||| |||||||    
T  30808725 taaacccacttgggttggtctggtgatattggcttgagacctgagaatatgctcctcctcaaggtctcagtttcgatt 30808648  T

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Target: chr2; HSP #31
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 13803513 - 13803577
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||| |||||||||| ||| |   |||||| |||| ||||||||||||| ||||||||||||||    
T  13803513 tagtgatattggcttgagacttaggagtgtgctcctcctcaaggtctcaggttcgattatctctg 13803577  T

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Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 300 - 372
Target Start/End: Original strand, 19322761 - 19322833
Alignment:
Q  300 caagttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctc 372  Q
    |||| |||||||||||| ||||   |||||||||||| ||||||||||  |||||| ||||  ||||||||||    
T  19322761 caaggtaaacccacttgggttgatctagtggtattggtttgggacctgggagtgtgctcctcttcaaggtctc 19322833  T

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Target: chr2; HSP #33
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Complemental strand, 21195753 - 21195677
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||| ||| |||| | ||||||||| ||||||| || ||  |||||| |||| ||||||||||||| |||||||    
T  21195753 aaacccatttgggttgccctagtggtataggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgatt 21195677  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 385
Target Start/End: Original strand, 28846709 - 28846769
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatc 385  Q
    ||||||||||| |||||||||||  |||||| |||| ||| | ||||||| ||||||||||    
T  28846709 tagtggtattgacttgggacctgggagtgtgctcctcctcgatgtctcaggttcgattatc 28846769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 30410607 - 30410543
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||||||||||   |||||| |||| ||||||| ||||  ||||||| ||||||    
T  30410607 tagtggtattggcttgggacctaggagtgtgctcctcctcaaggactcatgttcgattttctctg 30410543  T

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Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 326 - 382
Target Start/End: Original strand, 42420288 - 42420344
Alignment:
Q  326 agtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||||| |||||||| |||||| || | ||||||||||||  |||||||    
T  42420288 agtggtattggcttaggacctgagagtgtgctcttactcaaggtctcatgttcgatt 42420344  T

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Target: chr3 (Bit Score: 48; Significance: 2e-18; HSPs: 25)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 305 - 388
Target Start/End: Complemental strand, 32651515 - 32651433
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||||| ||||||| |||||||||||||||||||||||  |||||| |||| |||||| |||||||||||||| |||||    
T  32651515 taaacccactt-agttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaagatctcagattcgattctctct 32651433  T

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Target: chr3; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 15048138 - 15048055
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||| ||||||||| |||||| ||||||||| |||  | |||| |||| ||||||||||||| ||||||||||||||    
T  15048138 aaacccacttgggttggcttaatggtataggcttgggatctgggaatgtgctcctcctcaaggtctcaggttcgattatctctg 15048055  T

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Target: chr3; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 4222141 - 4222223
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||||||||||||||||||||||| |||  |||||| |||| ||||| |||| || ||||||| ||||||    
T  4222141 aacccacttgggttggcttagtggtattggcttgggatctgggagtgtgctcctcctcaaagtcttaggttcgattctctctg 4222223  T

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Target: chr3; HSP #4
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 16354968 - 16354886
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| ||||||||||||||||| |||||  |||||| |||| |||| |||||||| ||||||| ||||||    
T  16354968 aacccacttgggttggcctagtggtattggcttggaacctgtgagtgtgctcctcctcagggtctcaggttcgattctctctg 16354886  T

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Target: chr3; HSP #5
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 14186648 - 14186727
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||| |||||| ||||||||||| |||||||||||  |||||| |||| ||||||||||||| ||||||| ||||    
T  14186648 aacccacttgggttggcctagtggtattgtcttgggacctg-gagtgtgctcctcctcaaggtctcaggttcgattctctc 14186727  T

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Target: chr3; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 327 - 387
Target Start/End: Original strand, 21960571 - 21960631
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||||||||||||||| |||||| |||| ||| ||||||||||||||||| ||||    
T  21960571 gtggtattggcttgggacctgagagtgtgctcctcctcgaggtctcagattcgattctctc 21960631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 389
Target Start/End: Complemental strand, 27093438 - 27093355
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||| |||||| ||||||||||||||||| || ||  |||||| |||| ||||||||||||| || |||| ||||||    
T  27093438 aaacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggtttgattctctctg 27093355  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 46518627 - 46518710
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||| |||||| ||||||||||||||||||| |||  |||||| |||| |||||||| |||| || |||| ||||||    
T  46518627 aaacccacttgggttggcatagtggtattggcttgggatctgggagtgtgctcctcctcaaggtttcaggtttgattctctctg 46518710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 30311303 - 30311381
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| || |||||| ||||||||| ||||||||| |||  |||||| |||| ||||||||||||| |||||||    
T  30311303 ttaaacccacctgggttggcctagtggtataggcttgggatctgggagtgtgctcctcctcaaggtctcaggttcgatt 30311381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 10445216 - 10445133
Alignment:
Q  307 aacccacttgagttggcttagtggta-ttggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||||| | |||||||||||||||  |||||| |||| ||| ||||||||| ||||||| ||||||    
T  10445216 aacccacttgggttggcctagtggcaattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 10445133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 305 - 387
Target Start/End: Original strand, 24481579 - 24481660
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||||||||||  |||||||||||| ||||||| ||| |||||| |  ||||| | ||||||| ||||||||||||    
T  24481579 taaacccacttgagttggtctagtggtattggtttgggacttgagagtgtgctttttctcgacgtctcag-ttcgattatctc 24481660  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 37788541 - 37788460
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||| ||||||  |||||||||| ||||| ||||   |||||| |||| ||||||||||||| ||||||| |||||    
T  37788541 aacccacttgggttggcccagtggtattgacttggaacctaggagtgtgctcctcctcaaggtctcaggttcgattctctct 37788460  T

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Target: chr3; HSP #13
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 304 - 373
Target Start/End: Complemental strand, 39976510 - 39976441
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    ||||||||||||  ||||| |  ||||||||| |||||||| ||| |||||| |||||||||||||||||    
T  39976510 ttaaacccacttaggttggttcggtggtattgacttgggacttgagagtgtgctccttctcaaggtctca 39976441  T

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Target: chr3; HSP #14
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 19154630 - 19154706
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||| ||| |||||| |||| ||||||||||| | ||||| |||||| |||| || |||||||||| |||||||    
T  19154630 aaacccatttgggttggcctagttgtattggcttgaggcctgagagtgtgctcctcctaaaggtctcaggttcgatt 19154706  T

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Target: chr3; HSP #15
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 26481927 - 26482007
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||| ||| |||| |||||| ||||||||||||||| |||||| |||| ||||| || | || ||||||| ||||    
T  26481927 aacccacttgggttagcttggtggtaatggcttgggacctgagagtgtgctcctcctcaaagttttaggttcgattctctc 26482007  T

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Target: chr3; HSP #16
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 40063619 - 40063699
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||| |||| |||||| |||||||||||||| |||| ||| || |||| || |||||||||  ||||||| ||||    
T  40063619 aacccacttgggttgacttagtagtattggcttgggatctgagagtatgctcctccttaaggtctcaagttcgattctctc 40063699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 8170672 - 8170747
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||| ||| |||||| ||||||||||||||||  || ||  |||||| |||| ||||||||||||| |||||||    
T  8170672 aacccatttgggttggcctagtggtattggcttgaaacttgggagtgtgctcctactcaaggtctcaggttcgatt 8170747  T

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Target: chr3; HSP #18
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Complemental strand, 27923119 - 27923044
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||  |||||| | |||||||||||||||||| || ||||||| |||| ||||  ||||||| |||||||    
T  27923119 aacccacttaggttggcctggtggtattggcttgggacatggaagtgtgctcctcctcatagtctcaggttcgatt 27923044  T

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Target: chr3; HSP #19
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 310 - 389
Target Start/End: Original strand, 53412948 - 53413027
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||| |||||  ||||||||||||||||  |||||  |||||| |||| ||||||||||||| ||| ||| ||||||    
T  53412948 ccacttgggttggtctagtggtattggcttgtaacctgggagtgtgctcctcctcaaggtctcaggttcaattctctctg 53413027  T

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Target: chr3; HSP #20
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 318 - 388
Target Start/End: Original strand, 2667873 - 2667943
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||| | ||||||||||||||||| |||  |||||| || | ||| ||||||||| |||||||||||||    
T  2667873 gttggcctggtggtattggcttgggatctgggagtgtgctcttcctcgaggtctcaggttcgattatctct 2667943  T

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Target: chr3; HSP #21
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 305 - 347
Target Start/End: Original strand, 8051212 - 8051254
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctg 347  Q
    |||||||||||| |||||| | |||||||||||||||||||||    
T  8051212 taaacccacttgggttggcctggtggtattggcttgggacctg 8051254  T

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Target: chr3; HSP #22
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 31789046 - 31788964
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| ||||| ||||||||||||| |||  |||||| |||| ||| |||| | || || |||||||||||    
T  31789046 aacccacttgggttggcctagtgttattggcttgggatctgggagtgtgctcctcctcgaggttttaggtttgattatctctg 31788964  T

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Target: chr3; HSP #23
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 386
Target Start/End: Complemental strand, 11642287 - 11642206
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatct 386  Q
    ||||||||||||  ||||| || ||||||   ||||||| |||| | |||| |||| ||||||||||||| |||||||||||    
T  11642287 taaacccacttggattggcctactggtataaacttgggatctgagattgtgatcctcctcaaggtctcaggttcgattatct 11642206  T

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Target: chr3; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 310 - 366
Target Start/End: Complemental strand, 28928952 - 28928896
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaa 366  Q
    |||||||  ||||| ||||||||||||||||||| |||| |||||| |||| |||||    
T  28928952 ccacttggattggcctagtggtattggcttgggatctgagagtgtgctcctcctcaa 28928896  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 304 - 388
Target Start/End: Original strand, 36720378 - 36720462
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||||||| |||||  | |||||||||||||||||  ||  |||||| |||| ||| |||| |||| ||||||| |||||    
T  36720378 ttaaacccacttgggttggtctggtggtattggcttgggatatgggagtgtgctcctcctcgaggtttcaggttcgattctctct 36720462  T

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Target: scaffold0002 (Bit Score: 44; Significance: 6e-16; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 310 - 389
Target Start/End: Complemental strand, 95044 - 94965
Alignment:
Q  310 ccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||| |||||| ||||||||||||||||| |||||  |||||| |||| ||||||||||||| ||| ||||||||||    
T  95044 ccacttgggttggcctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcaattatctctg 94965  T

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Target: chr6 (Bit Score: 44; Significance: 6e-16; HSPs: 14)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 20744588 - 20744505
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||||||||||||||| |||||||||| ||  ||  || |||||||||||| ||||||||||||  ||||||||||||    
T  20744588 ttaaacccacttgagttggcttcgtggtattggattttgatatggaagtgtgttcctcctcaaggtctcatgttcgattatctc 20744505  T

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Target: chr6; HSP #2
Raw Score: 44; E-Value: 6e-16
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 28363948 - 28364019
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||| |||||||||||| |||||| |||  |||||| |||| ||||||||||||||||||||||||||||    
T  28363948 gttggcatagtggtattggtttgggatctgcgagtgtgctcctcctcaaggtctcagattcgattatctctg 28364019  T

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Target: chr6; HSP #3
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 306 - 388
Target Start/End: Complemental strand, 12188380 - 12188298
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||||| |||||| |||||||||||||||||||||||  |||||| |||| |||||||| |||  ||||||| |||||    
T  12188380 aaacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtttcaagttcgattctctct 12188298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 304 - 382
Target Start/End: Complemental strand, 10338253 - 10338175
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||| |||||| |||||| | ||||||||||||||||||||   |||||| |||| ||||||||||||| |||||||    
T  10338253 ttaaactcacttgggttggcatggtggtattggcttgggacctaggagtgtgctcctcctcaaggtctcaggttcgatt 10338175  T

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Target: chr6; HSP #5
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 306 - 387
Target Start/End: Original strand, 33549103 - 33549184
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||| |||||  | |||||||||||||||||||||  |||||| |||| ||| ||||||||| ||||||| ||||    
T  33549103 aaacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 33549184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 325 - 389
Target Start/End: Original strand, 3925762 - 3925826
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||| |||| | |||| ||||||||||||||||| ||||||||||| ||| ||||||    
T  3925762 tagtggtattggtttggaatctgagagtgtgttccttctcaaagtctcagattcaattctctctg 3925826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 378
Target Start/End: Original strand, 3779339 - 3779410
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattc 378  Q
    |||||||||  |||| | |||||||||||||||| ||| ||  |||||| ||||||||||||||||||||||    
T  3779339 aacccacttaggttgacctagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcagattc 3779410  T

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Target: chr6; HSP #8
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 304 - 387
Target Start/End: Complemental strand, 12234586 - 12234503
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||||||||||  |||||| | ||||||||| |||||||||||  |||||| ||| |||| ||||||||| ||||||| ||||    
T  12234586 ttaaacccacttaggttggcctggtggtattgacttgggacctgggagtgtgctccctctcgaggtctcaggttcgattctctc 12234503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 382
Target Start/End: Original strand, 14557962 - 14558037
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||| |||||  | ||||| ||||||||||||||| ||||||| |||| |||  |||||||| |||||||    
T  14557962 aacccacttgggttggtctggtggtgttggcttgggacctggaagtgtgctcctcctccgggtctcaggttcgatt 14558037  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 303 - 374
Target Start/End: Complemental strand, 31623071 - 31623000
Alignment:
Q  303 gttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    |||||||||||||| |||||    |||||||||||||||||||||  |||||| |||| ||| |||||||||    
T  31623071 gttaaacccacttgggttggtccggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcag 31623000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 313 - 382
Target Start/End: Original strand, 34444809 - 34444878
Alignment:
Q  313 cttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||| |||||| | ||||||||| |||||||||| | |||||| |||| | ||||||||||| |||||||    
T  34444809 cttgggttggcctggtggtattgacttgggaccttagagtgtgctcctccccaaggtctcaggttcgatt 34444878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 331 - 387
Target Start/End: Complemental strand, 6519222 - 6519166
Alignment:
Q  331 tattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    ||||| |||||||| |||||||||| | |||| |||||||| || ||||||||||||    
T  6519222 tattgacttgggacttgaaagtgtgcttcttcacaaggtcttaggttcgattatctc 6519166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 371
Target Start/End: Complemental strand, 21943503 - 21943440
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtct 371  Q
    |||||||||| |||||||| ||| ||||| |||||||||||| ||||||||| | ||| ||||||    
T  21943503 aacccacttg-gttggcttcgtgatattgacttgggacctgagagtgtgttcttcctcgaggtct 21943440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 330 - 382
Target Start/End: Complemental strand, 31847138 - 31847086
Alignment:
Q  330 gtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||| |||| | |||||||| || |||||||||||| ||||||||    
T  31847138 gtattggcttggaaccttagagtgtgttactcctcaaggtctcaaattcgatt 31847086  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 43; Significance: 0.000000000000002; HSPs: 24)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 25627057 - 25627139
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| ||||||||||||||||| || ||  |||||| |||| ||||||||||||| ||||||| ||||||    
T  25627057 aacccacttgggttggcctagtggtattggcttggaacttgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 25627139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 305 - 373
Target Start/End: Complemental strand, 30883276 - 30883208
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    |||||||||||| |||||  |||||||||||||||||||||||  |||||| |||| ||||||||||||    
T  30883276 taaacccacttgggttggtctagtggtattggcttgggacctgggagtgtgctcctcctcaaggtctca 30883208  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 14285160 - 14285243
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||| ||||||  ||||| |||||||||| |||||  |||||| |||| ||||||||||||| ||||||| ||||||    
T  14285160 aaacccacttgggttggccgagtggaattggcttggaacctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 14285243  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 306 - 389
Target Start/End: Original strand, 34984805 - 34984888
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||| |||||  ||||||||||||||||| |||||  |||||| |||| |||||||||| || ||||||| ||||||    
T  34984805 aaacccacttgggttggtctagtggtattggcttggaacctgggagtgtgctcctcctcaaggtcttaggttcgattctctctg 34984888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 39; E-Value: 0.0000000000006
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 16773807 - 16773889
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||||  | ||||||||| |||||||||||  |||||| |||| ||| ||||||||| ||||||| ||||||    
T  16773807 aacccacttgagttggtctggtggtattgacttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 16773889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 21549213 - 21549132
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||| |||||| |||||||||||||||||||||||  |||||| |||| || || ||||||  ||||||| |||||    
T  21549213 aacccacttgggttggcctagtggtattggcttgggacctgggagtgtgctcctccttaaagtctcaagttcgattttctct 21549132  T

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Target: chr5; HSP #7
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 305 - 382
Target Start/End: Complemental strand, 30109386 - 30109309
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||| |||||||| |||||||||||||| ||||||  |||||| |||| ||  ||||||||| |||||||    
T  30109386 taaacccacttgggttggcttggtggtattggcttgtgacctgggagtgtgctcctccttgaggtctcaggttcgatt 30109309  T

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Target: chr5; HSP #8
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 22737081 - 22737157
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||||||| |||||  |||||||||||||||||||| || ||||||| |||| | ||| ||||||| |||||||    
T  22737081 aaacccacttgggttggtctagtggtattggcttgggacttggaagtgtgctcctccccaatgtctcaggttcgatt 22737157  T

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Target: chr5; HSP #9
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 307 - 374
Target Start/End: Complemental strand, 892550 - 892483
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    |||||| ||| |||||| |||||||||||||||||||||| | |||||  |||| |||||||||||||    
T  892550 aacccatttgggttggcctagtggtattggcttgggacctcagagtgtactcctcctcaaggtctcag 892483  T

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Target: chr5; HSP #10
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 7918545 - 7918463
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| ||||||||||||||||| |||||  ||||   |||| |||||||||| || ||||||| ||||||    
T  7918545 aacccacttgggttggcctagtggtattggcttggaacctgggagtgcactcctcctcaaggtcttaggttcgattctctctg 7918463  T

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Target: chr5; HSP #11
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 304 - 382
Target Start/End: Original strand, 16436615 - 16436692
Alignment:
Q  304 ttaaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||| |||||| |||||| |||||||||||||||||||| ||  |||||| |||| ||||||||||||  |||||||    
T  16436615 ttaaactcacttgggttggcctagtggtattggcttgggacttg-gagtgtgctcctcctcaaggtctcatgttcgatt 16436692  T

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Target: chr5; HSP #12
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 307 - 374
Target Start/End: Original strand, 19043458 - 19043525
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    |||||||||| |||||| ||||| ||||| ||||| || ||  ||||||||||||||||| |||||||    
T  19043458 aacccacttgggttggcctagtgctattgacttggaacttgggagtgtgttccttctcaaagtctcag 19043525  T

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Target: chr5; HSP #13
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 318 - 389
Target Start/End: Original strand, 43442207 - 43442278
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||| |||||||||||| ||| || |||  |||||| |||| ||||||||||||| ||||||| ||||||    
T  43442207 gttggcatagtggtattggtttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctctg 43442278  T

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Target: chr5; HSP #14
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 373
Target Start/End: Original strand, 16457810 - 16457876
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctca 373  Q
    |||||||||  |||||| | ||||||||||||||||||||   |||||| |||| ||||||||||||    
T  16457810 aacccacttaggttggcctggtggtattggcttgggaccttggagtgtgctcctcctcaaggtctca 16457876  T

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Target: chr5; HSP #15
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 388
Target Start/End: Complemental strand, 26078128 - 26078046
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    ||||||||||| |||||| |||||||||||| ||||||| ||  ||| || | ||  |||||||||||| ||||||| |||||    
T  26078128 aaacccacttgggttggcctagtggtattggtttgggacttgggagtatgcttctcttcaaggtctcaggttcgattctctct 26078046  T

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Target: chr5; HSP #16
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 306 - 360
Target Start/End: Original strand, 26598523 - 26598577
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttcct 360  Q
    |||||||||||  ||||| ||||||||||||||||||| |||| |||||| ||||    
T  26598523 aaacccacttggattggcctagtggtattggcttgggatctgagagtgtgctcct 26598577  T

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Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 307 - 389
Target Start/End: Original strand, 29075781 - 29075863
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| ||| || ||||||||||||||||||| |||  |||||| |||| ||| || |||||  ||||||| ||||||    
T  29075781 aacccacttgggtttgcctagtggtattggcttgggatctgggagtgtgctcctcctcgagatctcatgttcgattctctctg 29075863  T

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Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 305 - 374
Target Start/End: Complemental strand, 87501 - 87432
Alignment:
Q  305 taaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcag 374  Q
    |||||||||||  |||||| ||||||||||| ||||| | |||  |||||| |||| |||||||||||||    
T  87501 taaacccacttcggttggcctagtggtattgccttggaatctgggagtgtgctcctcctcaaggtctcag 87432  T

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Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 306 - 387
Target Start/End: Complemental strand, 22020939 - 22020858
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||| |||| |||||| |||||||||| |||||||| |||  |||||| |||| ||  | ||||||||||||||| ||||    
T  22020939 aaaccctcttgggttggcatagtggtattagcttgggatctgggagtgtgctcctccttgaagtctcagattcgattctctc 22020858  T

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Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 320 - 389
Target Start/End: Complemental strand, 37258429 - 37258360
Alignment:
Q  320 tggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||| |||||||| ||   |||||| |||| |||||||| |||| ||||||| ||||||    
T  37258429 tggcttagtggtattagcttgggatctaggagtgtgctcctcctcaaggtttcaggttcgattctctctg 37258360  T

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Target: chr5; HSP #21
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 306 - 382
Target Start/End: Original strand, 12877568 - 12877644
Alignment:
Q  306 aaacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||||| |||||||||  |||||||||||| | |||| |||  |  |||||||||||||| ||||||| |||||||    
T  12877568 aaacccatttgagttggtctagtggtattggttcgggatctgggaacgtgttccttctcaatgtctcaggttcgatt 12877644  T

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Target: chr5; HSP #22
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 18596059 - 18595995
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||||||| ||||||  | |||| |||| |||||||||| || ||||||| ||||||    
T  18596059 tagtggtattggcttgtgacctgggaatgtgctcctcctcaaggtcttaggttcgattttctctg 18595995  T

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Target: chr5; HSP #23
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 347
Target Start/End: Original strand, 21589288 - 21589328
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctg 347  Q
    |||||||||| |||||| | |||||||||||||||||||||    
T  21589288 aacccacttgggttggcctggtggtattggcttgggacctg 21589328  T

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Target: chr5; HSP #24
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 307 - 388
Target Start/End: Complemental strand, 43230852 - 43230769
Alignment:
Q  307 aacccacttgagttggcttagtggtat--tggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctct 388  Q
    |||||||||| |||||| |||||||||  |||||||||  |||| |||||| |||| || ||| |||||||||| ||| |||||    
T  43230852 aacccacttgggttggcctagtggtatattggcttgggttctgagagtgtgctcctccttaagatctcagattcaattctctct 43230769  T

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Target: scaffold0126 (Bit Score: 41; Significance: 0.00000000000004; HSPs: 1)
Name: scaffold0126
Description:

Target: scaffold0126; HSP #1
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 325 - 389
Target Start/End: Complemental strand, 25405 - 25341
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||||||||| ||| ||  |||||| |||||||||||||||||| ||||||||||||||    
T  25405 tagtggtattggcttgagacttgggagtgtgctccttctcaaggtctcaggttcgattatctctg 25341  T

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Target: scaffold0258 (Bit Score: 37; Significance: 0.000000000009; HSPs: 1)
Name: scaffold0258
Description:

Target: scaffold0258; HSP #1
Raw Score: 37; E-Value: 0.000000000009
Query Start/End: Original strand, 307 - 387
Target Start/End: Complemental strand, 15399 - 15319
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||||| |||||  | |||||||||||||||||||||  |||||| |||| ||| ||||||||| ||||||| ||||    
T  15399 aacccacttgggttggtctggtggtattggcttgggacctgggagtgtgctcctcctcgaggtctcaggttcgattctctc 15319  T

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Target: scaffold0180 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0180
Description:

Target: scaffold0180; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 318 - 389
Target Start/End: Complemental strand, 20027 - 19956
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||| ||||||||||||||||| |||||  ||| || |||| ||||||||||||| ||||||| ||||||    
T  20027 gttggcctagtggtattggcttggaacctgggagtatgctcctcctcaaggtctcaggttcgattctctctg 19956  T

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Target: scaffold0118 (Bit Score: 35; Significance: 0.0000000001; HSPs: 1)
Name: scaffold0118
Description:

Target: scaffold0118; HSP #1
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 307 - 389
Target Start/End: Complemental strand, 41709 - 41627
Alignment:
Q  307 aacccacttgagttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    |||||||||| |||||| |||||||||||||||| || |||| ||| || |||| ||| ||||||||| ||| ||| ||||||    
T  41709 aacccacttgggttggcctagtggtattggcttgagatctgagagtatgctcctcctcgaggtctcaggttcaattctctctg 41627  T

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Target: scaffold0194 (Bit Score: 34; Significance: 0.0000000006; HSPs: 1)
Name: scaffold0194
Description:

Target: scaffold0194; HSP #1
Raw Score: 34; E-Value: 0.0000000006
Query Start/End: Original strand, 318 - 387
Target Start/End: Complemental strand, 13111 - 13042
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctc 387  Q
    |||||||| |||||||||||||| || |||  |||||| |||| ||||||||||||| ||||||| ||||    
T  13111 gttggcttggtggtattggcttgagatctgggagtgtgctcctcctcaaggtctcaggttcgattctctc 13042  T

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Target: scaffold0101 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0101
Description:

Target: scaffold0101; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 318 - 382
Target Start/End: Complemental strand, 43397 - 43333
Alignment:
Q  318 gttggcttagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||| | |||||||||||||||||| ||  |||||||||||||| |||||||||  |||||||    
T  43397 gttggcatggtggtattggcttgggacttgggagtgtgttccttcttaaggtctcatgttcgatt 43333  T

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Target: scaffold0517 (Bit Score: 32; Significance: 0.000000009; HSPs: 1)
Name: scaffold0517
Description:

Target: scaffold0517; HSP #1
Raw Score: 32; E-Value: 0.000000009
Query Start/End: Original strand, 327 - 382
Target Start/End: Complemental strand, 7782 - 7727
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    |||||||||||||| |||||||||||||| |||| || |||||||||  |||||||    
T  7782 gtggtattggcttgagacctgaaagtgtgctcctccttaaggtctcaagttcgatt 7727  T

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Target: scaffold0299 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0299
Description:

Target: scaffold0299; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 327 - 389
Target Start/End: Original strand, 11548 - 11610
Alignment:
Q  327 gtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgattatctctg 389  Q
    ||||||||||||||||| |||  |||||| |||| ||| ||||||||| ||||||| ||||||    
T  11548 gtggtattggcttgggatctgggagtgtgctcctcctcgaggtctcaggttcgattctctctg 11610  T

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Target: scaffold0004 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0004
Description:

Target: scaffold0004; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 325 - 382
Target Start/End: Complemental strand, 81622 - 81565
Alignment:
Q  325 tagtggtattggcttgggacctgaaagtgtgttccttctcaaggtctcagattcgatt 382  Q
    ||||| |||||| |||| | ||| ||||||| |||| |||||||||||||||||||||    
T  81622 tagtgatattggtttggaatctggaagtgtgctcctcctcaaggtctcagattcgatt 81565  T

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