View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4058_low_2 (Length: 571)
Name: NF4058_low_2
Description: NF4058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4058_low_2 |
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Alignment Details
Target: chr7 (Bit Score: 538; Significance: 0; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 538; E-Value: 0
Query Start/End: Original strand, 10 - 559
Target Start/End: Original strand, 25302062 - 25302611
Alignment:
| Q |
10 |
acatcatcactgctaaaccctatgtattacagaaggaaaaccaaaccaccttaaatttcccatgattcattcacccttggttttccctttgagcatcctt |
109 |
Q |
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| T |
25302062 |
acatcatcactgctaaaccctatgtattacagaaggaaaaccaaaccaccttaaatttcccatgattcattcacccttggttttccctctgagcatcctt |
25302161 |
T |
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| Q |
110 |
atcaaaacccaaagacctaaccttgagctgaagctcagcaacagcaacaaaaaagttgagaacctgagctggtttcagtatctgcacaactctcaaagct |
209 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25302162 |
atcaaaacccaaagacctaaccttgagctgaagctcagcaacagcaacaaaaaagttgagaacctgagctggtttcagtatctgcacaactctcaaagct |
25302261 |
T |
|
| Q |
210 |
gtctcagtcctcaaagcatcagcatttgtcaccaaattctccaatgtttccttgaatgaactagaaactgtaccctcttctgccatgaatgacctactca |
309 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25302262 |
gtctcagtcctcaaagcatcagcatttgtcaccaaattctccaatgtttccttgaatgaactagaaactgtaccctcttctgccatgaatgacctactca |
25302361 |
T |
|
| Q |
310 |
aacacactcttccatggcttctaacattgtcaagaaccggtggcgccgccatactctcatgaaccttagccaattcatcattgagttctctctccttcat |
409 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |
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| T |
25302362 |
aacacactcttccatggcttctaacattgtcaagaaccggtggcgccgccatactctcatgaaccttagccaattcatcatttagttctctctccttcat |
25302461 |
T |
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| Q |
410 |
cttagtctcttgtttgagctcactcaacctctgcctctgatcctctgacaaatcctctaaagttttgtttacaagatgaaatgttaaccctggtttgaac |
509 |
Q |
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|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
25302462 |
cttaatctcttgtttgagctcactcaacctctgcctctgatcctctgacaaatcctctaaagttttgtttacaagatgaaatgttaaccctggtttgaac |
25302561 |
T |
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| Q |
510 |
cctgccacccagagaaaagatttttccaatgaactgaaccatggtggtga |
559 |
Q |
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| T |
25302562 |
cctgccacccagagaaaagatttttccaatgaactgaaccatggtggtga |
25302611 |
T |
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