View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4058_low_4 (Length: 349)
Name: NF4058_low_4
Description: NF4058
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4058_low_4 |
 | |
|
| [»] scaffold0294 (1 HSPs) |
| | |
|
| [»] scaffold0286 (1 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 300; Significance: 1e-169; HSPs: 22)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 300; E-Value: 1e-169
Query Start/End: Original strand, 19 - 330
Target Start/End: Complemental strand, 5261698 - 5261387
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
5261698 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
5261599 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5261598 |
aattggaatggaccgaaatgatgttatactcgtattaaatgactgtggacttcatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
5261499 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
318 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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|
| T |
5261498 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
5261399 |
T |
|
| Q |
319 |
ggttgtgcgatc |
330 |
Q |
| |
|
||||||| |||| |
|
|
| T |
5261398 |
ggttgtgtgatc |
5261387 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 256; E-Value: 1e-142
Query Start/End: Original strand, 31 - 325
Target Start/End: Complemental strand, 5285683 - 5285391
Alignment:
| Q |
31 |
atcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttcttaattggaatgga |
130 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||| ||||||| ||||||||||||||||||||||| |
|
|
| T |
5285683 |
atcaagtgcagaagaagttaagaataagttatgatgatttgaaagataatgatgagcaagaaatattccttgaca--gcttgtttcttaattggaatgga |
5285586 |
T |
|
| Q |
131 |
ccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataag |
230 |
Q |
| |
|
| | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5285585 |
cagaaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataag |
5285486 |
T |
|
| Q |
231 |
aacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtg |
325 |
Q |
| |
|
|||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
5285485 |
aacatgcttggaatgcatggtttgctgcgagatatgggaagaggaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgtg |
5285391 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 19 - 330
Target Start/End: Original strand, 5445530 - 5445838
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
|||||||| ||||||||||||||||||||||||| || |||||||||| ||| || ||| |||| |||||||||| ||| |||| ||||||||||| |
|
|
| T |
5445530 |
gaattccttatgatcaagtgcagaagaagttaaggatgagttatgatggtttaaatcatgc---tgagaaagaaatattccttcacattgcttgtttctt |
5445626 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
| || ||||||| |||||||||||||| |||||||||| || ||||||| |||||||||||||||||| |||||||||| |||||||||||| | |
|
|
| T |
5445627 |
tgtcgggatggaccaaaatgatgttatacttttattaaatgattgcggactttctgcagaaattggaataagtgtccttgttgctcgaagccttgtgact |
5445726 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
318 |
Q |
| |
|
||||||||||||||||||||||||||||||||| | |||||||||||||||||| ||| ||| |||||||||||||||||||||||||||||||||| | |
|
|
| T |
5445727 |
gttgatgataagaacatgcttggaatgcatggtcagctgcgagatatgggaagaggaatcgtttgtgaggaatcaccaaggaggcctgagaaacgtagta |
5445826 |
T |
|
| Q |
319 |
ggttgtgcgatc |
330 |
Q |
| |
|
||||||| |||| |
|
|
| T |
5445827 |
ggttgtgggatc |
5445838 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 296
Target Start/End: Original strand, 5094491 - 5094768
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||| ||||| | |||||||||||||||||||| ||||||| ||| || |||||| |||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
5094491 |
gaattcctaataatcaattacagaagaagttaagaataagctatgatgctttaaatgatgacattgagaaagaaatattccttgatgtagcttgtttctt |
5094590 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||||| ||||| |||| ||| ||||||||| |||||||||| ||| |||||||||||||| ||||||||||| | || ||||| | | |
|
|
| T |
5094591 |
tattgggatggaccgaaatgacgttacacttatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcgtagtcttgtaact |
5094690 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacca |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
5094691 |
gttgatgataagaacaaacttggaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcacca |
5094768 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 296
Target Start/End: Original strand, 5368910 - 5369187
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||| ||||||| |||||||||||||||||||| ||||||| ||| || ||||| ||||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
5368910 |
gaattcctaataatcaagtacagaagaagttaagaataagctatgatgctttaaatgatgattatgagaaagaaatattccttgatgtagcttgtttctt |
5369009 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| | |||||| |||||||||| ||| ||||| ||| |||||||||| ||| |||||||||||||| ||||||||||| |||| ||||| | | |
|
|
| T |
5369010 |
tattgggaaggaccgaaatgatgttacacttatattagatggatgtggactttttgctgaaattggaataagtatccttgttgagcgaagtcttgtcact |
5369109 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacca |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
5369110 |
gttgatgataagaacaaacttggaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcacca |
5369187 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 130; E-Value: 3e-67
Query Start/End: Original strand, 19 - 296
Target Start/End: Original strand, 5424203 - 5424480
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||| ||||||| ||| |||||||||||||||| ||||||| ||| || ||||| |||| |||||||||| |||||||||||||||||||| |
|
|
| T |
5424203 |
gaattcctaataatcaagtacaggagaagttaagaataagctatgatgctttaaatgatgatactgagaaagaaatattccttgacatagcttgtttctt |
5424302 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
|||||||||||| | |||||||||| ||| ||||||||| |||||||||| ||| |||||||||||||| ||||||||||| | || ||||| | | |
|
|
| T |
5424303 |
tattggaatggacagaaatgatgttacacttatattaaatggatgtggactttttgctgaaattggaataagtatccttgttgagcggagtcttgtcact |
5424402 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacca |
296 |
Q |
| |
|
||||||||||| |||| ||||||||||||| ||||||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
5424403 |
gttgatgataataacaaacttggaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcacca |
5424480 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 126; E-Value: 6e-65
Query Start/End: Original strand, 19 - 296
Target Start/End: Complemental strand, 5068626 - 5068349
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||| ||||||| ||| |||||||||||||||| ||||||| ||| || ||||| |||| |||||||||| |||||||||||||||||||| |
|
|
| T |
5068626 |
gaattcctaataatcaagtacaggagaagttaagaataagctatgatgctttaaatgatgatactgagaaagaaatattccttgacatagcttgtttctt |
5068527 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||||| |||||||||| ||| ||||||||| || ||||||| ||| |||||||||||||| ||||||||||| |||| || || | | |
|
|
| T |
5068526 |
tattgggatggaccgaaatgatgttacacttatattaaatggatgcggactttttgctgaaattggaataagtatccttgttgagcgaagtctggttatt |
5068427 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacca |
296 |
Q |
| |
|
|||||| | ||||||| ||||||||||||| ||||||||||||||||||||||||||| ||||||| | |||||||| |
|
|
| T |
5068426 |
gttgataaaaagaacaaacttggaatgcatgatttgttgcgagatatgggaagagaaatcgttcgtgggaaatcacca |
5068349 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 124; E-Value: 1e-63
Query Start/End: Original strand, 19 - 326
Target Start/End: Original strand, 5342144 - 5342451
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
|||||||||| ||||||| || |||||||||| |||||| ||||||| ||| || || || |||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5342144 |
gaattcctaacaatcaagtacaaaagaagttaaaaataagctatgatggtttaaatgacgagactgagaaagaaatatttcttgacatagcttgtttctt |
5342243 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||||| |||||||| |||| ||||||||| ||||||||||| |||||||||||||||||| || ||||||||| |||||||||| | | |
|
|
| T |
5342244 |
tattgggatggaccgaaatgatgtcatacaaatattaaatggctgtggactttttgcagaaattggaataagtgttcttgttgagcgaagccttgtaatt |
5342343 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
318 |
Q |
| |
|
||||| ||||||| ||||||||||| | |||| |||||||||||||||||||||| ||||||||| ||||||||| | || || | | ||||||| |
|
|
| T |
5342344 |
gttgacagcaagaacaaacttggaatgcacgatttgctgcgagatatgggaagagaaatcgttcgtgagaaatcaccaaaggagcttggggagcgtagca |
5342443 |
T |
|
| Q |
319 |
ggttgtgc |
326 |
Q |
| |
|
|||||||| |
|
|
| T |
5342444 |
ggttgtgc |
5342451 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 19 - 296
Target Start/End: Complemental strand, 5104424 - 5104147
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||| ||||||| || ||||||||||||||||| || |||| ||| || |||||| |||| |||||||||| || || ||||||||||||| |
|
|
| T |
5104424 |
gaattcctaataatcaagtacaaaagaagttaagaataagctacgatggtttaaatgatgacattgagaaagaaatattcctcgatgtagcttgtttctt |
5104325 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||||| ||||| |||| ||| ||||| ||| |||||||||| |||||||||||||||||| ||||||||||| |||| ||| | | | |
|
|
| T |
5104324 |
tattgggatggaccgaaatgacgttacacttatattagatggatgtggactttttgcagaaattggaataagtatccttgttgagcgaagtcttataact |
5104225 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacca |
296 |
Q |
| |
|
|||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
5104224 |
gttgatgataagaacaaacttggaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcacca |
5104147 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 19 - 297
Target Start/End: Complemental strand, 5148511 - 5148233
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||| ||||||||||||||||||||||||| |||||| ||||| ||||| || |||| || | |||||||||| |||||||||||||||||||| |
|
|
| T |
5148511 |
gaattcccaatgatcaagtgcagaagaagttaaaaataagctatgacgatttaaatgatgttcttgtgaaagaaatattccttgacatagcttgtttctt |
5148412 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||||| |||||||| |||| ||||||||| ||||| ||||||||||||||||||||||| ||||| | ||| |||||||||||| | |
|
|
| T |
5148411 |
tattgggatggaccgaaatgatgtcatacatatattaaatggctgtgaactttatgcagaaattggaataaatgtcctactggagcgaagccttgtgact |
5148312 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaa |
297 |
Q |
| |
|
|||||||||| ||| |||||||||||||| |||||||||||| |||| ||||||||| | || ||||||||||||| |
|
|
| T |
5148311 |
gttgatgatatgaatcggcttggaatgcatgatttgttgcgagacatggcaagagaaatcatacgcgaggaatcaccaa |
5148233 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 116; E-Value: 6e-59
Query Start/End: Original strand, 19 - 286
Target Start/End: Complemental strand, 5075283 - 5075016
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||| |||||| ||||||| ||| || |||||| |||| | ||||||| || ||||||||||||||||| |
|
|
| T |
5075283 |
gaattcctaatgatcaagtgcagaagaagttaaaaataagctatgatggtttaaacgatgacactgagaagaaaatattcctcgacatagcttgtttctt |
5075184 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| ||||| || |||||||||| ||| ||||||||| |||| ||||| ||| ||||||||| |||| || ||||||||| |||||||||| | | |
|
|
| T |
5075183 |
tattgggatggatcgaaatgatgttacacttatattaaatggatgtgaactttttgctgaaattggagtaagtgtacttgttgagcgaagccttgtaact |
5075084 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtga |
286 |
Q |
| |
|
|| ||||||| ||||| |||||||||||||| |||| |||| ||||||||||||||||| ||||||| |
|
|
| T |
5075083 |
gtcgatgataggaacaagcttggaatgcatgatttgctgcgtgatatgggaagagaaatcattcgtga |
5075016 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 5395493 - 5395771
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||||||||||| || |||||||||| |||||| ||||||| ||| || |||||| |||| |||||||||| ||||||||||||||||| || |
|
|
| T |
5395493 |
gaattcctaatgatcaagttcaaaagaagttaaaaataagctatgatgctttaaatgatgacactgagaaagaaatattccttgacatagcttgtttttt |
5395592 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||| | ||||||||||||| ||||||||| | | ||||| ||||||||||||| |||| |||||||||||| |||||||||| | | |
|
|
| T |
5395593 |
tattgggatggacaggaatgatgttatacatatattaaatggtagcgaactttttgcagaaattggagtaagtgtccttgttgagcgaagccttgtaact |
5395692 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaa |
297 |
Q |
| |
|
|||||||||| ||||| |||| |||||||| |||| | ||||||||||||||||||| ||||||||| | ||||||| |
|
|
| T |
5395693 |
gttgatgataggaacagacttgcaatgcatgatttgctaagagatatgggaagagaaatcgttcgtgagaagtcaccaa |
5395771 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 113; E-Value: 4e-57
Query Start/End: Original strand, 19 - 296
Target Start/End: Original strand, 5348825 - 5349104
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||| ||||||| ||| | |||||||||||||| || |||| |||||| ||||| |||| |||||||||| |||||||||||||||||||| |
|
|
| T |
5348825 |
gaattcctaataatcaagtacaggaaaagttaagaataagctacgatgctttgaatgatgatactgagaaagaaatattccttgacatagcttgtttctt |
5348924 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||||| |||||||||| ||| ||||||||| |||| ||||| ||| |||||||||||||| || ||||||| |||| ||||| | | |
|
|
| T |
5348925 |
tattgggatggaccgaaatgatgttacacttatattaaatggatgtgaactttttgctgaaattggaataagtatctttgttgatcgaagtcttgtcact |
5349024 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgc--atggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacca |
296 |
Q |
| |
|
|||||||||||||||| |||||||||| ||| ||||||||||||||||||||||||||| |||||| | |||||||| |
|
|
| T |
5349025 |
gttgatgataagaacaaacttggaatgcatatgatttgttgcgagatatgggaagagaaatcattcgtgggaaatcacca |
5349104 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 19 - 296
Target Start/End: Complemental strand, 5159053 - 5158776
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||| ||||||| || ||||||||| ||||||| || |||| ||| || |||||| |||| |||||||||| ||||| ||||||||||||| |
|
|
| T |
5159053 |
gaattcctaataatcaagtacataagaagttacgaataagctacgatgctttaaatgatgactttgagaaagaaatattccttgatgtagcttgtttctt |
5158954 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
|| || |||||||| ||||| |||| ||| ||||||||| |||| ||||| || ||||||||||||||| ||||||||||| | || ||||| | | |
|
|
| T |
5158953 |
tatagggatggaccgaaatgacgttacacttatattaaatggatgtgaactttttggtgaaattggaataagcatccttgttgagcgtagtcttgttact |
5158854 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacca |
296 |
Q |
| |
|
||||||| |||||||| ||||||||||||| ||||||||||||||||||||||||||| |||||||| |||||||| |
|
|
| T |
5158853 |
gttgatggtaagaacaaacttggaatgcatgatttgttgcgagatatgggaagagaaatcattcgtgagaaatcacca |
5158776 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 109; E-Value: 9e-55
Query Start/End: Original strand, 19 - 295
Target Start/End: Complemental strand, 5356168 - 5355892
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
|||||||||| | ||||| || ||||| ||| |||||| ||||||| ||| || ||||| | ||| ||||||||||||||||||||||||||||||| |
|
|
| T |
5356168 |
gaattcctaacaaccaagtacaaaagaaactaaaaataagctatgatggtttaaatgatgatgccgagaaagaaatatttcttgacatagcttgtttctt |
5356069 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| || ||||| ||||||| || ||| ||||||||| |||||||||||||| |||||||||||||| | ||||||||| |||||||||| | | |
|
|
| T |
5356068 |
tattgggatcgaccgaaatgatgctacactaatattaaatggatgtggactttatgctgaaattggaataagtattcttgttgagcgaagccttgtaact |
5355969 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacc |
295 |
Q |
| |
|
|||||||||||||| | |||| ||||||||| |||| | |||||||||||||||||| | ||||||||| ||||||| |
|
|
| T |
5355968 |
gttgatgataagaataggcttagaatgcatgatttgctacgagatatgggaagagaagtcgttcgtgagaaatcacc |
5355892 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 101; E-Value: 5e-50
Query Start/End: Original strand, 19 - 295
Target Start/End: Complemental strand, 5133457 - 5133181
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||| ||||||| || |||||| ||| |||||| ||||||| ||| || || || |||| |||||||||| ||| ||||||||||||| || |
|
|
| T |
5133457 |
gaattcctaataatcaagtacaaaagaagctaaaaataagctatgatgctttaaatgaagatattgagaaagaaatattccttaacatagcttgtttttt |
5133358 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
|||| |||||| |||||||||| || ||||||||| |||||||||| ||| |||||||||||||| | ||| |||||||||||||||| | | |
|
|
| T |
5133357 |
tattgatatggacacaaatgatgttacacatatattaaatggttgtggactttttgccgaaattggaataagtattcttattgagagaagccttgtaact |
5133258 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcacc |
295 |
Q |
| |
|
||||||| |||| ||| |||||||||||||| ||||||| |||||||||||||||||||| ||||||| |||||||| |
|
|
| T |
5133257 |
gttgatgctaaggacaggcttggaatgcatgatttgttgagagatatgggaagagaaattattcgtgaagaatcacc |
5133181 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 5183504 - 5183198
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||||||||||| || |||||||||| |||||| || |||| | | | |||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
5183504 |
gaattcctaatgatcaagtacaaaagaagttaaaaataagctacgatgctctaagtgatgacaccgagaaagaaatattccttgacatagcttgtttctt |
5183405 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||| | ||||||||||||| ||||||||| | | | ||| ||||||||||||| |||| ||||||||||||||||||||||| | | |
|
|
| T |
5183404 |
tattgggatggacaggaatgatgttatacatatattaaatggtagcgaattttttgcagaaattggagtaagtgtccttgttgagagaagccttgtaact |
5183305 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
318 |
Q |
| |
|
|||||||||| ||||| || |||||||| |||| | ||||||||||||||||||| ||||||||| | ||||||| ||||||| | ||||||| |
|
|
| T |
5183304 |
gttgatgataggaacaaactgcaaatgcatgatttgctaagagatatgggaagagaaatcgttcgtgagaagtcaccaaaagagcctgaggagcgtagca |
5183205 |
T |
|
| Q |
319 |
ggttgtg |
325 |
Q |
| |
|
||||||| |
|
|
| T |
5183204 |
ggttgtg |
5183198 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 20 - 292
Target Start/End: Complemental strand, 5691662 - 5691390
Alignment:
| Q |
20 |
aattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctta |
119 |
Q |
| |
|
|||||||||| ||||||| || || |||||||||||||| ||||||| ||| | ||| | ||| |||||||||| |||||| | ||||||||||| |
|
|
| T |
5691662 |
aattcctaatcatcaagtacaaaaaaagttaagaataagctatgatggtttaagtgattatacggagaaagaaatattccttgacgtggcttgtttcttt |
5691563 |
T |
|
| Q |
120 |
attggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtg |
219 |
Q |
| |
|
||||| |||| || ||||||||| ||| ||||| ||| |||| |||||||||| ||||||||||| |||||||| ||| |||||||||||| || |
|
|
| T |
5691562 |
attgggatggttcgaaatgatgttgtacatatattagatggttgtgatctttatgcaggaattggaataaatgtccttgtggagcgaagccttgtgactg |
5691463 |
T |
|
| Q |
220 |
ttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatc |
292 |
Q |
| |
|
||||||||| ||||| |||| ||||||||| ||||||||||||||||||||||||||| ||||||||| |||| |
|
|
| T |
5691462 |
ttgatgataggaacaggcttagaatgcatgatttgttgcgagatatgggaagagaaatcgttcgtgagaaatc |
5691390 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 83; E-Value: 3e-39
Query Start/End: Original strand, 88 - 322
Target Start/End: Original strand, 5382168 - 5382401
Alignment:
| Q |
88 |
aagaaatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaat |
187 |
Q |
| |
|
|||||||||| |||||||||||||||||||| |||||| ||||||| || ||||||| || ||||||||| ||||| |||| ||| || || ||||| |
|
|
| T |
5382168 |
aagaaatattccttgacatagcttgtttctttattgga-tggaccgaaacgatgttacacaaatattaaatgggtgtgggctttttgctgatatcggaat |
5382266 |
T |
|
| Q |
188 |
aagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgag |
287 |
Q |
| |
|
||| ||||||||||||||||||||||| | ||| ||||||||||| | ||||||||||||| |||||| | ||||||||||||||||| ||||||| |
|
|
| T |
5382267 |
aagtgtccttgttgagagaagccttgtaactgtcgatgataagaatacacttggaatgcatgatttgttaagggatatgggaagagaaatcattcgtgaa |
5382366 |
T |
|
| Q |
288 |
gaatcaccaaggaggcctgagaaacgtagcaggtt |
322 |
Q |
| |
|
||||||||| | |||||| | ||||||||||| |
|
|
| T |
5382367 |
aaatcaccaaaggatcctgaggagcgtagcaggtt |
5382401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 79; E-Value: 7e-37
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 5277143 - 5277401
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||||| |||| || |||||||||| |||||| ||||||| ||| | ||||| | || || |||||| || ||| ||||||||||||| |
|
|
| T |
5277143 |
gaattcctaatgacaaagtacaaaagaagttaaaaataagctatgatggtttagacgatgattaccagaaatcaatattcctcgacgtagcttgtttctt |
5277242 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||| | ||||||||||||| ||||||||| ||||||| ||| ||||||| ||||||||| |||||||||||| ||||| | || | |
|
|
| T |
5277243 |
tattgggatggacagaaatgatgttatacatatattaaatggctgtggattttttgcagaagatggaataagtgtccttgttgagcgaagcttagtaacg |
5277342 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaat |
277 |
Q |
| |
|
|||||| |||| |||| ||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
5277343 |
gttgataataaaaacaagcttggaatgcataatttgttgcgggatatgggaagagaaat |
5277401 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 19 - 277
Target Start/End: Original strand, 5175316 - 5175574
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||||| |||| || |||||||||| |||||| ||||||| ||| | ||||| | || || |||||| || ||| ||||||||||||| |
|
|
| T |
5175316 |
gaattcctaatgacaaagtacaaaagaagttaaaaataagctatgatggtttagacgatgattaccagaaatcaatattcctcgacgtagcttgtttctt |
5175415 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||| | ||||||||||||| ||||||||| ||||||| ||| ||||||| ||||||||| ||||| |||||| ||||| | || | |
|
|
| T |
5175416 |
tattgggatggacagaaatgatgttatacatatattaaatggctgtggattttttgcagaagatggaataagtgtcctggttgagcgaagcttagtaacg |
5175515 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaat |
277 |
Q |
| |
|
|||||| |||| |||| ||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
5175516 |
gttgataataaaaacaagcttggaatgcataatttgttgcgggatatgggaagagaaat |
5175574 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 92 - 277
Target Start/End: Original strand, 5431930 - 5432115
Alignment:
| Q |
92 |
aatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagc |
191 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| | ||| || ||||||||||||| || |||||| |||| || | | ||| ||| ||||||||| |
|
|
| T |
5431930 |
aatattccttgacatagcttgtttctttattggtaaggagcgaaatgatgttatacatatactaaatggctgtcgattgtttgctgaagatggaataaga |
5432029 |
T |
|
| Q |
192 |
gtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaat |
277 |
Q |
| |
|
|||||||||||| | ||| | || | |||||||| | |||| |||||||||||||| ||||||||| ||||||||||||||||| |
|
|
| T |
5432030 |
gtccttgttgagcgtagcttagtatatattgatgatgataacaagcttggaatgcatgatttgttgcgggatatgggaagagaaat |
5432115 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr2 (Bit Score: 238; Significance: 1e-132; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 238; E-Value: 1e-132
Query Start/End: Original strand, 19 - 324
Target Start/End: Complemental strand, 22585873 - 22585568
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||||||||||| |||||| |
|
|
| T |
22585873 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttggaagatactgatgagcaagaaatattccttgacatagcttttttctt |
22585774 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||||||||||||| ||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
|
|
| T |
22585773 |
aattggaatggaccgaaatgatgttatactcatattaaatgactgtggacttcatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
22585674 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
318 |
Q |
| |
|
|||||||||||||||| |||||||||||||| |||| |||||||||||||||||| |||||||| |||||||||||||| ||| |||||||| ||||||| |
|
|
| T |
22585673 |
gttgatgataagaacaggcttggaatgcatgatttgctgcgagatatgggaagaggaattgttcttgaggaatcaccaaagagtcctgagaagcgtagca |
22585574 |
T |
|
| Q |
319 |
ggttgt |
324 |
Q |
| |
|
|||||| |
|
|
| T |
22585573 |
ggttgt |
22585568 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4 (Bit Score: 131; Significance: 6e-68; HSPs: 18)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 19 - 297
Target Start/End: Original strand, 4358860 - 4359138
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||| |||||||||||||| |||||||||| |||||||||||||| ||| || ||||| || |||||||||| ||||||||| |||||||||| |
|
|
| T |
4358860 |
gaattcccaatgatcaagtgcataagaagttaaaaataagttatgatggtttaaatgatgatacacagaaagaaatattccttgacatatcttgtttctt |
4358959 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
|||||||||||||| ||||||||||| | ||||| ||| ||||||| ||| ||||| |||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
4358960 |
tattggaatggaccggaatgatgttattcgtatattagatggctgtggattttttgcaggaattggaataagtgtccttgttgagagaagccttgtaacg |
4359059 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaa |
297 |
Q |
| |
|
|||||||||||||||| |||||| ||||||| |||| | |||||||||||||||||||| |||||||| ||||||||| |
|
|
| T |
4359060 |
gttgatgataagaacaagcttggcatgcatgatttgctccgagatatgggaagagaaatcattcgtgagaaatcaccaa |
4359138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #2
Raw Score: 122; E-Value: 2e-62
Query Start/End: Original strand, 20 - 325
Target Start/End: Original strand, 4334003 - 4334308
Alignment:
| Q |
20 |
aattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctta |
119 |
Q |
| |
|
|||||| ||||||||||| || |||||||||| |||||| ||||||| ||| || ||||| |||| || |||||| |||||||||||||||||||| |
|
|
| T |
4334003 |
aattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgatgatactgagaaatcaatattccttgacatagcttgtttcttt |
4334102 |
T |
|
| Q |
120 |
attggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtg |
219 |
Q |
| |
|
||||| |||||||| ||||||||||| | ||||||||| ||||||||||| || |||||||||||||| |||||||||||| |||||||||| | | |
|
|
| T |
4334103 |
attgggatggaccgaaatgatgttattcaaatattaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgagcgaagccttgtaacgg |
4334202 |
T |
|
| Q |
220 |
ttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcag |
319 |
Q |
| |
|
| |||| |||||||| |||||| ||||||| |||| | |||||||||||||||||||| |||||||| ||||||||| | ||||||| ||||||| || |
|
|
| T |
4334203 |
tcgatggtaagaacaagcttggcatgcatgatttgcttcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagtag |
4334302 |
T |
|
| Q |
320 |
gttgtg |
325 |
Q |
| |
|
|||||| |
|
|
| T |
4334303 |
gttgtg |
4334308 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #3
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 4125989 - 4125686
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||| ||||||||||| || |||||||||| |||||| ||||||| ||| || ||| || || || |||||| |||||||||||||||||||| |
|
|
| T |
4125989 |
gaattcccaatgatcaagtacataagaagttaaaaataagctatgatggtttaaatgat-aca--gaaaaatcaatattccttgacatagcttgtttctt |
4125893 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
|||||| |||||||| ||||||||||| || | ||||||| ||||||||||| || |||||||||||||| ||||||||||| |||||||||| | |
|
|
| T |
4125892 |
aattgggatggaccgaaatgatgttattcttattttaaatggctgtggacttttcgctgaaattggaataagtgtccttgttgaacgaagccttgtaaca |
4125793 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
318 |
Q |
| |
|
|||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||| |||||||| ||||||||| | ||||||| ||||||| | |
|
|
| T |
4125792 |
gttgatgataagaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagta |
4125693 |
T |
|
| Q |
319 |
ggttgtg |
325 |
Q |
| |
|
||||||| |
|
|
| T |
4125692 |
ggttgtg |
4125686 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #4
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 20 - 325
Target Start/End: Original strand, 4343392 - 4343697
Alignment:
| Q |
20 |
aattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctta |
119 |
Q |
| |
|
|||||| |||||| ||||||| |||||||||| |||||| || |||| ||| || ||||| || |||||||||| || |||||| |||||||||| |
|
|
| T |
4343392 |
aattcccaatgatgaagtgcataagaagttaaaaataagctacgatggtttaaatgatgatacacagaaagaaatattcctcgacatatcttgtttcttt |
4343491 |
T |
|
| Q |
120 |
attggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtg |
219 |
Q |
| |
|
||||| ||||| || ||||||||||| | || |||||| ||||||| ||| |||||||| || ||||| ||||||||||||||||||||||| | | |
|
|
| T |
4343492 |
attgggatggatcgaaatgatgttattcgtatactaaatggctgtggatttttcgcagaaatcggcataagtgtccttgttgagagaagccttgtaatgg |
4343591 |
T |
|
| Q |
220 |
ttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcag |
319 |
Q |
| |
|
||||||||||||||| |||||| ||||||| |||| |||||||||||||||||||||| |||||||| |||| |||| | ||||||| ||| ||| || |
|
|
| T |
4343592 |
ttgatgataagaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaatcgccaaaggagcctgaggaacatagtag |
4343691 |
T |
|
| Q |
320 |
gttgtg |
325 |
Q |
| |
|
|||||| |
|
|
| T |
4343692 |
gttgtg |
4343697 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #5
Raw Score: 99; E-Value: 8e-49
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 4322654 - 4322348
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||| ||||||||||| || ||||||||| |||||| || |||| || || ||||| ||| || |||||| |||||||| ||||||||||| |
|
|
| T |
4322654 |
gaattcccaatgatcaagtacatcagaagttaaaaataagctacgatggcttaaatgatgatacagagaaatcaatattccttgacattgcttgtttctt |
4322555 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| ||||| || |||||||| || | ||||||||| | |||| ||| ||||||||||||||||| ||||||||||||||||||||||| | |
|
|
| T |
4322554 |
tattgggatggatcgaaatgatgtcattcatatattaaatggttctggatttttcgcagaaattggaataagtgtccttgttgagagaagccttgtaacg |
4322455 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
318 |
Q |
| |
|
|||||||||||||||| |||||| ||||||| |||| |||||||||||||||| ||||| |||||||| ||||||||| | ||||||| ||||||| | |
|
|
| T |
4322454 |
gttgatgataagaacaagcttggcatgcatgatttgctgcgagatatgggaagggaaatcattcgtgagaaatcaccaatggagcctgaggaacgtagta |
4322355 |
T |
|
| Q |
319 |
ggttgtg |
325 |
Q |
| |
|
||||||| |
|
|
| T |
4322354 |
ggttgtg |
4322348 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #6
Raw Score: 86; E-Value: 5e-41
Query Start/End: Original strand, 92 - 325
Target Start/End: Original strand, 4351752 - 4351985
Alignment:
| Q |
92 |
aatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagc |
191 |
Q |
| |
|
|||||| |||||||||||||||||||| ||||| || ||| | ||||||||||| |||||||| ||| |||||| ||||||||||||||| |
|
|
| T |
4351752 |
aatattccttgacatagcttgtttctttattgggatagacagaaatgatgttatttgtatattaaatagctgcagacttttcacagaaattggaataaag |
4351851 |
T |
|
| Q |
192 |
gtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaat |
291 |
Q |
| |
|
|| |||||||||||||||||||| | ||||||||||| |||| |||||| ||||||| |||| |||||||||||||||||||||| |||||||| ||| |
|
|
| T |
4351852 |
gttcttgttgagagaagccttgtaatcgttgatgataaaaacaagcttggcatgcatgatttgctgcgagatatgggaagagaaatcattcgtgagaaat |
4351951 |
T |
|
| Q |
292 |
caccaaggaggcctgagaaacgtagcaggttgtg |
325 |
Q |
| |
|
|||||| | ||||||| ||||||| |||||||| |
|
|
| T |
4351952 |
caccaaaggagcctgaggaacgtagtaggttgtg |
4351985 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #7
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 27 - 274
Target Start/End: Complemental strand, 4135326 - 4135079
Alignment:
| Q |
27 |
aatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttcttaattggaa |
126 |
Q |
| |
|
|||||||||||||| |||||||| | |||||| ||||||| ||| || |||||| ||| ||| ||||| |||||||| |||| |||||| ||||| | |
|
|
| T |
4135326 |
aatgatcaagtgcaaaagaagttgaaaataagctatgatggtttaaatgatgacaccgagagagatatattccttgacattgcttttttctttattggga |
4135227 |
T |
|
| Q |
127 |
tggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatga |
226 |
Q |
| |
|
||||||| || |||||||| ||||||||| ||||| |||| ||| ||||| |||||||| |||||||||||| |||||||||| | | ||||||| |
|
|
| T |
4135226 |
tggaccgaaacgatgttatggatatattaaatggttgtggtctttttgctgaaatcggaataagtgtccttgttgagcgaagccttgtaactattgatga |
4135127 |
T |
|
| Q |
227 |
taagaacatgcttggaatgcatggtttgttgcgagatatgggaagaga |
274 |
Q |
| |
|
||| |||| |||||||||||||| |||| | ||||||||||||||||| |
|
|
| T |
4135126 |
taaaaacaagcttggaatgcatgatttgctacgagatatgggaagaga |
4135079 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #8
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 19 - 262
Target Start/End: Original strand, 25568444 - 25568688
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
|||||||||| | |||||| || |||||||| | |||||| ||||||| | | || ||||| | || |||| ||||| || |||||||||||||||| |
|
|
| T |
25568444 |
gaattcctaacggtcaagtacaaaagaagttgaaaataagctatgatgctctaaatgatgatactcaggaagatatattcctcaacatagcttgtttctt |
25568543 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| ||| ||| ||| |||| |||| |||| |||| |||| ||||||||||||||||||||||| ||||||||||||| |||||||||||| | |
|
|
| T |
25568544 |
tattgggttggtccgaaataatgtaatacatatattgaatggttgtgaactttatgcagaaattggaataaacgtccttgttgagcgaagccttgtgact |
25568643 |
T |
|
| Q |
219 |
gttgatg-ataagaacatgcttggaatgcatggtttgttgcgaga |
262 |
Q |
| |
|
|||||| || ||||| ||||||||||||| |||||||||||| |
|
|
| T |
25568644 |
attgatgaattggaacagacttggaatgcatgatttgttgcgaga |
25568688 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #9
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 91 - 296
Target Start/End: Original strand, 6649555 - 6649760
Alignment:
| Q |
91 |
aaatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataag |
190 |
Q |
| |
|
||||||| ||||| || ||||||||||| |||||||||||||| ||||||| |||| ||||||||| ||||| ||| ||| || |||||||| | |
|
|
| T |
6649555 |
aaatattccttgatattgcttgtttctttattggaatggaccgaaatgatgcaatacaaatattaaatgggagtggattttttgctgatattggaattaa |
6649654 |
T |
|
| Q |
191 |
cgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaa |
290 |
Q |
| |
|
|||||||| |||||||||||||| | |||||| ||| ||||| |||| ||||||||| |||||| |||| |||||| || |||| ||| ||||||| |
|
|
| T |
6649655 |
agtccttgtagagagaagccttgtaactgttgacaataggaacaagcttagaatgcatgatttgttaagagacatgggacgacaaatagtttatgaggaa |
6649754 |
T |
|
| Q |
291 |
tcacca |
296 |
Q |
| |
|
|||||| |
|
|
| T |
6649755 |
tcacca |
6649760 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #10
Raw Score: 51; E-Value: 4e-20
Query Start/End: Original strand, 93 - 271
Target Start/End: Complemental strand, 6499812 - 6499634
Alignment:
| Q |
93 |
atatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcg |
192 |
Q |
| |
|
||||| ||||| |||||||| ||||| ||||| |||||||| |||||||| |||| ||||||||| |||||| ||| ||| || |||||||| | | |
|
|
| T |
6499812 |
atattccttgatatagcttgcttctttattgggatggaccgaaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattggaattaaag |
6499713 |
T |
|
| Q |
193 |
tccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaag |
271 |
Q |
| |
|
||||||| ||| |||||||| | | | |||| ||| ||||| |||| ||||||||| ||||||| ||||||||||||| |
|
|
| T |
6499712 |
tccttgtagagcgaagccttttaattattgacaataggaacaagcttagaatgcatgatttgttgagagatatgggaag |
6499634 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #11
Raw Score: 47; E-Value: 9e-18
Query Start/End: Original strand, 91 - 277
Target Start/End: Complemental strand, 6547370 - 6547184
Alignment:
| Q |
91 |
aaatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataag |
190 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||| |||||| ||||||| |||| ||||||||| ||| || ||| ||| || |||||||| | |
|
|
| T |
6547370 |
aaatattccttgatatagcttgtttctttattgggatggacaaaaatgatgcaatacaaatattaaatgggtgtagattttttgctgatattggaattaa |
6547271 |
T |
|
| Q |
191 |
cgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaat |
277 |
Q |
| |
|
|||||||| ||| |||||||||| | |||||| ||| ||||| |||| ||||||||| ||||||| |||| ||||||||| |||| |
|
|
| T |
6547270 |
agtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgcatgatttgttgagagacatgggaagacaaat |
6547184 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #12
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 91 - 296
Target Start/End: Original strand, 6814274 - 6814479
Alignment:
| Q |
91 |
aaatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataag |
190 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||| | |||||| |||||||| |||| ||||||||| |||||| || ||| || |||||||| | |
|
|
| T |
6814274 |
aaatattccttgatatagcttgtttctttattgggagggaccgaaatgatgtaatacgaatattaaatgggtgtggatattttgctgatattggaattaa |
6814373 |
T |
|
| Q |
191 |
cgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaa |
290 |
Q |
| |
|
|||||||||||| || |||||| | |||||| ||| ||||| |||| ||||||||| ||||| |||| ||||||||| |||| || ||||||| |
|
|
| T |
6814374 |
agtccttgttgagcgagcccttgtaactgttgacaataggaacaagcttagaatgcatgatttgtgaagagacatgggaagacaaataatttatgaggaa |
6814473 |
T |
|
| Q |
291 |
tcacca |
296 |
Q |
| |
|
|||||| |
|
|
| T |
6814474 |
tcacca |
6814479 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #13
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 91 - 277
Target Start/End: Original strand, 6756965 - 6757151
Alignment:
| Q |
91 |
aaatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataag |
190 |
Q |
| |
|
||||||| ||||| |||||||||||||| ||||| | |||| | |||||||| |||| ||||||||| |||||| ||| ||| || |||||||| | |
|
|
| T |
6756965 |
aaatattccttgatatagcttgtttctttattgggaaggacagaaatgatgtaatacaaatattaaatgggtgtggattttttgctgatattggaattaa |
6757064 |
T |
|
| Q |
191 |
cgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaat |
277 |
Q |
| |
|
|| ||||| ||| ||| |||||| | ||||| | | ||||| |||| ||||||||||||||||| |||| ||||||||| |||| |
|
|
| T |
6757065 |
agttcttgtagagtgaacccttgtaaccgttgacaacaggaacaagcttagaatgcatggtttgttgagagacatgggaagacaaat |
6757151 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #14
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 84 - 271
Target Start/End: Complemental strand, 6623903 - 6623716
Alignment:
| Q |
84 |
gagcaagaaatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattg |
183 |
Q |
| |
|
|||||| ||||||| ||||| ||||| |||||||| ||||||||||| ||||||| ||| ||||||||| ||||| ||| ||| || |||| |
|
|
| T |
6623903 |
gagcaacaaatattccttgatatagcctgtttcttgattggaatggataaaaatgatgcaataaaaatattaaatgggtgtgggttttttgcggatattg |
6623804 |
T |
|
| Q |
184 |
gaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaag |
271 |
Q |
| |
|
|||| | |||||||| ||| |||||||||| | |||||| ||| ||||| |||| ||||||||| |||||| ||||||||||||| |
|
|
| T |
6623803 |
gaattaaagtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgcatgacttgttgagagatatgggaag |
6623716 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #15
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 28 - 130
Target Start/End: Complemental strand, 6535182 - 6535080
Alignment:
| Q |
28 |
atgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttcttaattggaat |
127 |
Q |
| |
|
|||||||||| || |||||| |||||||||||| ||||| ||| ||||||| |||||| ||||||| ||||| ||||| |||||||| |||||||| |
|
|
| T |
6535182 |
atgatcaagtacaaaagaagctaagaataagttttgatggtttaaaagatgttacagagcaacaaatattccttgatatagcctgtttcttgattggaat |
6535083 |
T |
|
| Q |
128 |
gga |
130 |
Q |
| |
|
||| |
|
|
| T |
6535082 |
gga |
6535080 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #16
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 91 - 296
Target Start/End: Original strand, 6751347 - 6751552
Alignment:
| Q |
91 |
aaatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataag |
190 |
Q |
| |
|
||||||| ||||| ||||| |||||||| |||||||||||||| |||||||| || | ||||||||| ||||| ||| ||| || |||||| | |
|
|
| T |
6751347 |
aaatattccttgatatagcctgtttctttattggaatggaccgaaatgatgtaattcaaatattaaatgggtgtgggttttttgctgattctggaatgaa |
6751446 |
T |
|
| Q |
191 |
cgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaa |
290 |
Q |
| |
|
|||||| | ||| |||| ||||| | |||||| || ||||| |||| ||||||||| ||||||| |||| ||||||||| |||| || ||||||| |
|
|
| T |
6751447 |
agtccttttagagcgaagtcttgtaactgttgacaatgggaacaagcttagaatgcatgatttgttgagagacatgggaagacaaataatttatgaggaa |
6751546 |
T |
|
| Q |
291 |
tcacca |
296 |
Q |
| |
|
|||||| |
|
|
| T |
6751547 |
tcacca |
6751552 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #17
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 91 - 131
Target Start/End: Original strand, 6726433 - 6726473
Alignment:
| Q |
91 |
aaatatttcttgacatagcttgtttcttaattggaatggac |
131 |
Q |
| |
|
||||||||||||| |||||||||||||| ||||| |||||| |
|
|
| T |
6726433 |
aaatatttcttgatatagcttgtttctttattgggatggac |
6726473 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr4; HSP #18
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 192 - 296
Target Start/End: Original strand, 6726534 - 6726638
Alignment:
| Q |
192 |
gtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaat |
291 |
Q |
| |
|
||||||||||||||| |||||| | |||||| || |||||| ||| ||||||||| ||||||| |||| |||||||| |||| || |||||||| |
|
|
| T |
6726534 |
gtccttgttgagagagcccttgtaactgttgacaatgagaacaaacttagaatgcatgatttgttgagagacatgggaaggcaaatcatttttgaggaat |
6726633 |
T |
|
| Q |
292 |
cacca |
296 |
Q |
| |
|
||||| |
|
|
| T |
6726634 |
cacca |
6726638 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 107; Significance: 1e-53; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 19 - 325
Target Start/End: Complemental strand, 36215444 - 36215138
Alignment:
| Q |
19 |
gaattcctaatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttctt |
118 |
Q |
| |
|
||||||| ||||| ||||| || |||||||||| ||| || ||||| | | | || |||||| ||| |||||||||| |||||||||||||||||||| |
|
|
| T |
36215444 |
gaattcccaatgaccaagtacaaaagaagttaaaaatgagctatgaaggtctaaatgatgacacggagaaagaaatattccttgacatagcttgtttctt |
36215345 |
T |
|
| Q |
119 |
aattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagt |
218 |
Q |
| |
|
||||| |||||| | ||||||||||||| ||||||||| ||| ||||| ||||||||||||| |||| || ||||| ||| |||||||||| | | |
|
|
| T |
36215344 |
tattgggatggacagaaatgatgttatacatatattaaatggaagtgaactttttgcagaaattggagtaagtgttcttgtagagcgaagccttgtaact |
36215245 |
T |
|
| Q |
219 |
gttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagca |
318 |
Q |
| |
|
|||||||||| ||||| |||||||||||||| |||| ||||||||||||||||||| || |||||||| ||||||||| | || |||| | ||||||| |
|
|
| T |
36215244 |
gttgatgataggaacaggcttggaatgcatgatttgctgcgagatatgggaagagagatcattcgtgagaaatcaccaaaggagcttgaggagcgtagca |
36215145 |
T |
|
| Q |
319 |
ggttgtg |
325 |
Q |
| |
|
||||||| |
|
|
| T |
36215144 |
ggttgtg |
36215138 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 90; Significance: 2e-43; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 27 - 325
Target Start/End: Original strand, 8876259 - 8876559
Alignment:
| Q |
27 |
aatgatcaagtgcagaagaagttaagaataagttatgatgatttgaaagatgacgatgagcaagaaatatttcttgacatagcttgtttcttaattggaa |
126 |
Q |
| |
|
||||||||||| || ||||||||| |||||| ||||||| | | || ||||| || | |||||||||| |||||||||||||||||||| ||||| | |
|
|
| T |
8876259 |
aatgatcaagtacatgagaagttaaaaataagctatgatggtctaaatgatgatattgcgaaagaaatattccttgacatagcttgtttctttattggga |
8876358 |
T |
|
| Q |
127 |
tggaccgtaatgatgttatactcgta--ttaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgat |
224 |
Q |
| |
|
||||||| ||||||||||||| || ||||||| |||| ||||||| | |||||||||||||| || |||||||| |||||||||| | | ||| |
|
|
| T |
8876359 |
tggaccgaaatgatgttatacatatattttaaatgggtgtgaactttatcctgaaattggaataagtgttcttgttgaacgaagccttgtaaccatggat |
8876458 |
T |
|
| Q |
225 |
gataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgaggaatcaccaaggaggcctgagaaacgtagcaggttgt |
324 |
Q |
| |
|
|| | ||| |||||||||||||||| ||||||| |||||||||||||||||| |||||||| ||||||||| | |||||| | ||||||||||||| |
|
|
| T |
8876459 |
gaaaggaatatgcttggaatgcatgatttgttgacagatatgggaagagaaatcattcgtgagaaatcaccaaaggatcctgaggagcgtagcaggttgt |
8876558 |
T |
|
| Q |
325 |
g |
325 |
Q |
| |
|
| |
|
|
| T |
8876559 |
g |
8876559 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 231 - 286
Target Start/End: Original strand, 15801829 - 15801884
Alignment:
| Q |
231 |
aacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtga |
286 |
Q |
| |
|
|||| |||||||||||||| | || | ||||| ||||||||||||||||||||||| |
|
|
| T |
15801829 |
aacaagcttggaatgcatgctctgctacgagacatgggaagagaaattgttcgtga |
15801884 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0294 (Bit Score: 76; Significance: 4e-35; HSPs: 1)
Name: scaffold0294
Description:
Target: scaffold0294; HSP #1
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 88 - 299
Target Start/End: Complemental strand, 10151 - 9940
Alignment:
| Q |
88 |
aagaaatatttcttgacatagcttgtttcttaattggaatggaccgtaatgatgttatactcgtattaaatgactgtggactttatgcagaaattggaat |
187 |
Q |
| |
|
|||| ||||| |||||||||||||||||||| ||||| |||||||| || ||||||| || ||||||||| |||||||||| ||| | || ||||| |
|
|
| T |
10151 |
aagatatattccttgacatagcttgtttctttattgggatggaccgaaacgatgttacacaaatattaaatggatgtggactttttgctaatatcggaat |
10052 |
T |
|
| Q |
188 |
aagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtgag |
287 |
Q |
| |
|
||| |||||||||||| |||||||| | | ||| ||||||||||| | ||||||||||||| ||| || |||||||||||||| ||||| ||||||| |
|
|
| T |
10051 |
aagtgtccttgttgagcgaagccttctaactgtcgatgataagaatacacttggaatgcatgatttattacgagatatgggaagggaaatcattcgtgaa |
9952 |
T |
|
| Q |
288 |
gaatcaccaagg |
299 |
Q |
| |
|
||||||||||| |
|
|
| T |
9951 |
aaatcaccaagg |
9940 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 38; Significance: 0.000000000002; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 162 - 283
Target Start/End: Complemental strand, 7165968 - 7165847
Alignment:
| Q |
162 |
tgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatggtttgttgcgag |
261 |
Q |
| |
|
|||||||||||||| || |||||||||| ||||| || ||| | |||||||||| |||| | || |||| |||||||||||||| |||| | ||| |
|
|
| T |
7165968 |
tgtggactttatgctgacattggaataacggtcctcgtagagcggagccttgtgaaaattgaaaagaataacaagcttggaatgcatgatttgcttagag |
7165869 |
T |
|
| Q |
262 |
atatgggaagagaaattgttcg |
283 |
Q |
| |
|
| |||||||||||||||||||| |
|
|
| T |
7165868 |
acatgggaagagaaattgttcg |
7165847 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 286
Target Start/End: Original strand, 3363070 - 3363120
Alignment:
| Q |
236 |
gcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtga |
286 |
Q |
| |
|
|||||||||||||| |||| | ||||| |||||||| |||||||||||||| |
|
|
| T |
3363070 |
gcttggaatgcatgctttgctacgagacatgggaagggaaattgttcgtga |
3363120 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 236 - 286
Target Start/End: Complemental strand, 3392813 - 3392763
Alignment:
| Q |
236 |
gcttggaatgcatggtttgttgcgagatatgggaagagaaattgttcgtga |
286 |
Q |
| |
|
|||||||||||||| |||| | ||||| |||||||| |||||||||||||| |
|
|
| T |
3392813 |
gcttggaatgcatgatttgctacgagacatgggaagggaaattgttcgtga |
3392763 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0286 (Bit Score: 33; Significance: 0.000000002; HSPs: 1)
Name: scaffold0286
Description:
Target: scaffold0286; HSP #1
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 151 - 271
Target Start/End: Original strand, 5266 - 5386
Alignment:
| Q |
151 |
tattaaatgactgtggactttatgcagaaattggaataagcgtccttgttgagagaagccttgtgagtgttgatgataagaacatgcttggaatgcatgg |
250 |
Q |
| |
|
||||||||| ||||| ||| ||| || |||||||| | |||||||| ||| |||||||||| | |||||| ||| ||||| |||| ||||||||| |
|
|
| T |
5266 |
tattaaatgggtgtgggttttttgcggatattggaattaaagtccttgtagagcgaagccttgtaactgttgacaataggaacaagcttagaatgcatga |
5365 |
T |
|
| Q |
251 |
tttgttgcgagatatgggaag |
271 |
Q |
| |
|
|||||| ||||||||||||| |
|
|
| T |
5366 |
cttgttgagagatatgggaag |
5386 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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