View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4059_high_2 (Length: 273)
Name: NF4059_high_2
Description: NF4059
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4059_high_2 |
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Alignment Details
Target: chr2 (Bit Score: 259; Significance: 1e-144; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 259; E-Value: 1e-144
Query Start/End: Original strand, 1 - 263
Target Start/End: Original strand, 2109557 - 2109819
Alignment:
| Q |
1 |
ttatggaaatagattttcaaattaaatcatctgcaagtaaagtagtagcaagcttcattggcggagaataaacaatcttaatgttgcaactccacaccca |
100 |
Q |
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| T |
2109557 |
ttatggaaatagattttcaaattaaatcatctgcaagtaaagtagtagcaagcttcattggcggagaataaacaatcttaatgttgcaactccacactca |
2109656 |
T |
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| Q |
101 |
agttcttacgtagtttctgctaaatatcatagtacaaaacagcggcaaaaacatgaaaatgttgaatcctttcattaattaactaacttaagagcgatga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2109657 |
agttcttacgtagtttctgctaaatatcatagtacaaaacagcggcaaaaacatgaaaatgttgaatcctttcattaattaactaacttaagagcgatga |
2109756 |
T |
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| Q |
201 |
gagcgtatgaataactcaactctaattcaatctataatagcataaaatagttgcaaggaaaat |
263 |
Q |
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||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2109757 |
gagcgtatgaataactcaactctaattcaatctataatagcataaaatagttgcaaggaaaat |
2109819 |
T |
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