View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4060_low_15 (Length: 275)
Name: NF4060_low_15
Description: NF4060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4060_low_15 |
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Alignment Details
Target: chr8 (Bit Score: 153; Significance: 4e-81; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 51 - 265
Target Start/End: Original strand, 44070754 - 44070977
Alignment:
| Q |
51 |
ggaaacacaaaaaggtaggaagcgatcatacgtataatttcctccactaatttttctatcacaaaatggacaattatttcttcttccaaactaccannnn |
150 |
Q |
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| T |
44070754 |
ggaaacacaaaaaggtaggaagcgatcgtacgtataatttcctccactaatttttctatcacaaaatggacaattatttcttcttccaaactaccaattt |
44070853 |
T |
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| Q |
151 |
nnnnn---------aaacattcttcaaaactagtaatgatgtatgccaatattgttaattaggaacttttcaatcgagctttgtaacttctcaatttact |
241 |
Q |
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| T |
44070854 |
ttttatttttttttaaacattcttccaaactagtaatgatgtatgccaatattgttaattaggaacttttcaatcgagttttgtaacttctcaatttact |
44070953 |
T |
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| Q |
242 |
catctctatttccctaaacctttg |
265 |
Q |
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| T |
44070954 |
catctctatttccctaaacctttg |
44070977 |
T |
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