View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4060_low_2 (Length: 560)

Name: NF4060_low_2
Description: NF4060
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4060_low_2
NF4060_low_2
[»] chr5 (23 HSPs)
chr5 (116-327)||(34218397-34218608)
chr5 (373-543)||(34218655-34218825)
chr5 (8-82)||(34218289-34218363)
chr5 (148-309)||(5651158-5651328)
chr5 (149-303)||(4240095-4240258)
chr5 (149-259)||(1460828-1460938)
chr5 (210-326)||(7125119-7125244)
chr5 (149-262)||(39852780-39852893)
chr5 (468-543)||(29716608-29716683)
chr5 (160-253)||(16548881-16548974)
chr5 (209-298)||(25868820-25868909)
chr5 (192-265)||(29716815-29716888)
chr5 (154-262)||(40013384-40013492)
chr5 (192-265)||(21238783-21238856)
chr5 (192-265)||(21489904-21489977)
chr5 (149-250)||(29758667-29758768)
chr5 (157-303)||(37014272-37014426)
chr5 (149-262)||(4549937-4550050)
chr5 (149-262)||(13926341-13926454)
chr5 (209-253)||(2675110-2675154)
chr5 (209-265)||(33892866-33892922)
chr5 (259-310)||(28623137-28623188)
chr5 (209-264)||(34909613-34909668)
[»] chr1 (60 HSPs)
chr1 (407-541)||(32759810-32759944)
chr1 (407-543)||(3593494-3593630)
chr1 (407-538)||(47371281-47371412)
chr1 (157-307)||(47371547-47371706)
chr1 (416-520)||(49236727-49236831)
chr1 (409-509)||(48966231-48966331)
chr1 (149-264)||(5494772-5494887)
chr1 (409-543)||(25253787-25253921)
chr1 (147-265)||(5209391-5209509)
chr1 (424-538)||(42304093-42304207)
chr1 (407-515)||(28403700-28403808)
chr1 (192-303)||(9322144-9322254)
chr1 (155-265)||(35177233-35177344)
chr1 (208-326)||(42304453-42304580)
chr1 (210-326)||(9192067-9192192)
chr1 (149-262)||(15834710-15834823)
chr1 (445-537)||(35176981-35177073)
chr1 (210-326)||(4005110-4005235)
chr1 (209-310)||(18954507-18954608)
chr1 (418-543)||(49452766-49452884)
chr1 (192-309)||(32760069-32760195)
chr1 (149-262)||(8140909-8141022)
chr1 (160-324)||(25253486-25253659)
chr1 (210-326)||(41353464-41353588)
chr1 (210-326)||(51106935-51107060)
chr1 (154-309)||(28403916-28404080)
chr1 (149-265)||(45272976-45273092)
chr1 (149-308)||(48966462-48966630)
chr1 (149-303)||(46328395-46328558)
chr1 (147-265)||(49453083-49453202)
chr1 (179-253)||(49971631-49971705)
chr1 (149-265)||(49236989-49237105)
chr1 (210-265)||(1243329-1243384)
chr1 (154-265)||(3583579-3583690)
chr1 (190-265)||(27257881-27257956)
chr1 (192-263)||(34751597-34751668)
chr1 (149-303)||(38535772-38535935)
chr1 (149-303)||(38557990-38558153)
chr1 (192-265)||(3593271-3593344)
chr1 (149-262)||(6312985-6313098)
chr1 (160-265)||(15927292-15927397)
chr1 (149-262)||(25612501-25612614)
chr1 (149-262)||(29396110-29396223)
chr1 (209-265)||(7798542-7798598)
chr1 (192-252)||(8122214-8122274)
chr1 (209-265)||(33886883-33886939)
chr1 (209-265)||(33957311-33957367)
chr1 (259-310)||(8147418-8147469)
chr1 (259-310)||(26757716-26757767)
chr1 (210-252)||(8147360-8147402)
chr1 (192-262)||(18798904-18798974)
chr1 (211-253)||(52182370-52182412)
chr1 (216-265)||(34019168-34019217)
chr1 (373-414)||(49452935-49452976)
chr1 (259-296)||(49453043-49453080)
chr1 (149-262)||(51702004-51702117)
chr1 (259-291)||(11579088-11579120)
chr1 (259-303)||(25830876-25830919)
chr1 (259-303)||(48177069-48177112)
chr1 (210-262)||(49231477-49231529)
[»] chr2 (41 HSPs)
chr2 (407-543)||(38295431-38295567)
chr2 (407-543)||(34342501-34342637)
chr2 (407-543)||(31846874-31847010)
chr2 (407-539)||(40829891-40830022)
chr2 (149-253)||(15224191-15224295)
chr2 (149-259)||(379340-379450)
chr2 (149-260)||(214938-215049)
chr2 (154-309)||(40829600-40829766)
chr2 (149-298)||(13833053-13833211)
chr2 (149-262)||(10657840-10657953)
chr2 (180-307)||(2308687-2308823)
chr2 (209-324)||(38295674-38295798)
chr2 (209-275)||(12877707-12877773)
chr2 (206-307)||(18727620-18727730)
chr2 (192-262)||(32242233-32242303)
chr2 (160-265)||(3858446-3858551)
chr2 (149-262)||(25288573-25288686)
chr2 (209-265)||(13898497-13898553)
chr2 (209-265)||(14039114-14039170)
chr2 (408-543)||(18727349-18727484)
chr2 (193-264)||(37810908-37810979)
chr2 (149-262)||(33136028-33136139)
chr2 (210-310)||(18899898-18900007)
chr2 (149-262)||(28739973-28740086)
chr2 (209-265)||(24025869-24025925)
chr2 (149-252)||(7027313-7027416)
chr2 (206-253)||(15926396-15926443)
chr2 (149-252)||(18177681-18177784)
chr2 (210-265)||(31847242-31847297)
chr2 (192-262)||(1833733-1833803)
chr2 (211-253)||(11153386-11153428)
chr2 (381-414)||(9731236-9731269)
chr2 (192-265)||(19948542-19948615)
chr2 (192-265)||(35404343-35404416)
chr2 (259-303)||(3464131-3464174)
chr2 (209-253)||(3991794-3991838)
chr2 (259-303)||(6224206-6224250)
chr2 (491-543)||(9731286-9731338)
chr2 (407-451)||(35404105-35404149)
chr2 (209-265)||(38413478-38413534)
chr2 (217-265)||(41978866-41978914)
[»] chr4 (42 HSPs)
chr4 (407-550)||(46286968-46287111)
chr4 (407-543)||(24966199-24966335)
chr4 (417-543)||(32890144-32890269)
chr4 (407-509)||(53574047-53574149)
chr4 (418-515)||(46862666-46862763)
chr4 (416-543)||(33139061-33139188)
chr4 (417-543)||(29509769-29509894)
chr4 (206-288)||(33138818-33138900)
chr4 (206-326)||(50517211-50517340)
chr4 (149-253)||(23671412-23671516)
chr4 (149-303)||(49834462-49834625)
chr4 (206-326)||(24966475-24966604)
chr4 (149-265)||(29510092-29510208)
chr4 (149-265)||(32889857-32889973)
chr4 (149-303)||(5800374-5800537)
chr4 (154-303)||(28484310-28484469)
chr4 (149-299)||(49501165-49501324)
chr4 (149-299)||(49507230-49507389)
chr4 (149-259)||(32322476-32322586)
chr4 (147-265)||(55165484-55165602)
chr4 (160-265)||(871782-871886)
chr4 (206-326)||(26491079-26491208)
chr4 (192-303)||(29855969-29856089)
chr4 (209-276)||(41470341-41470408)
chr4 (159-262)||(41725533-41725636)
chr4 (210-310)||(29469185-29469294)
chr4 (209-265)||(6487344-6487400)
chr4 (259-303)||(37916318-37916362)
chr4 (461-515)||(35518229-35518283)
chr4 (192-262)||(37828108-37828178)
chr4 (231-284)||(12754539-12754592)
chr4 (149-262)||(27768474-27768587)
chr4 (149-262)||(50018602-50018715)
chr4 (210-309)||(8084231-8084339)
chr4 (259-326)||(46286789-46286856)
chr4 (419-474)||(55165803-55165858)
chr4 (192-262)||(5441855-5441925)
chr4 (149-262)||(30967021-30967134)
chr4 (149-262)||(48261488-48261601)
chr4 (149-262)||(51321266-51321379)
chr4 (209-265)||(9972794-9972850)
chr4 (209-253)||(51967298-51967342)
[»] chr7 (49 HSPs)
chr7 (416-550)||(16709804-16709938)
chr7 (416-550)||(17684040-17684174)
chr7 (419-543)||(43172335-43172459)
chr7 (154-326)||(42610583-42610764)
chr7 (407-505)||(23017256-23017354)
chr7 (407-515)||(21486408-21486516)
chr7 (161-303)||(21486115-21486266)
chr7 (149-303)||(32884179-32884333)
chr7 (148-253)||(43172114-43172219)
chr7 (149-303)||(41827736-41827899)
chr7 (149-303)||(44121567-44121730)
chr7 (147-265)||(23016951-23017069)
chr7 (149-303)||(29893380-29893543)
chr7 (156-262)||(44256439-44256545)
chr7 (180-265)||(26201813-26201898)
chr7 (417-540)||(5771824-5771947)
chr7 (149-299)||(29585922-29586081)
chr7 (149-303)||(37328315-37328478)
chr7 (149-262)||(7993565-7993678)
chr7 (149-262)||(18838818-18838931)
chr7 (210-291)||(37915893-37915974)
chr7 (149-262)||(37972561-37972674)
chr7 (157-265)||(12740786-12740894)
chr7 (192-303)||(48136862-48136982)
chr7 (208-263)||(11735215-11735270)
chr7 (407-477)||(27149104-27149174)
chr7 (149-265)||(16709396-16709510)
chr7 (149-265)||(17683632-17683746)
chr7 (149-262)||(28034532-28034645)
chr7 (192-265)||(33497116-33497189)
chr7 (149-262)||(33891918-33892031)
chr7 (154-262)||(40460398-40460506)
chr7 (224-310)||(37392603-37392688)
chr7 (149-262)||(510054-510167)
chr7 (210-326)||(4639828-4639952)
chr7 (210-310)||(14741448-14741557)
chr7 (149-262)||(28342719-28342832)
chr7 (149-262)||(39784515-39784628)
chr7 (259-303)||(21067907-21067951)
chr7 (149-252)||(29614489-29614592)
chr7 (157-251)||(8675747-8675841)
chr7 (192-265)||(27148849-27148922)
chr7 (149-238)||(33383082-33383171)
chr7 (259-303)||(8675859-8675903)
chr7 (209-265)||(14732318-14732374)
chr7 (209-265)||(21024087-21024143)
chr7 (290-326)||(23017093-23017129)
chr7 (192-264)||(35313561-35313633)
chr7 (259-303)||(39028614-39028657)
[»] chr3 (42 HSPs)
chr3 (407-519)||(16155406-16155518)
chr3 (407-541)||(43173160-43173294)
chr3 (416-543)||(4962417-4962543)
chr3 (158-307)||(33693226-33693384)
chr3 (411-525)||(33693527-33693641)
chr3 (154-305)||(7437546-7437706)
chr3 (407-543)||(49458628-49458759)
chr3 (149-303)||(48379558-48379721)
chr3 (190-307)||(16155166-16155292)
chr3 (149-326)||(4962685-4962871)
chr3 (149-262)||(52617651-52617764)
chr3 (149-253)||(7665552-7665656)
chr3 (149-303)||(44905484-44905647)
chr3 (149-303)||(54629259-54629422)
chr3 (154-303)||(20833310-20833468)
chr3 (416-477)||(7667175-7667236)
chr3 (210-326)||(8598681-8598806)
chr3 (149-262)||(51737366-51737479)
chr3 (149-253)||(21386520-21386624)
chr3 (154-264)||(43172893-43173003)
chr3 (407-543)||(7437255-7437380)
chr3 (157-262)||(23753068-23753173)
chr3 (149-262)||(39038498-39038611)
chr3 (209-307)||(49458379-49458486)
chr3 (149-303)||(52810766-52810929)
chr3 (149-301)||(26107737-26107898)
chr3 (209-265)||(9818588-9818644)
chr3 (407-543)||(21386195-21386331)
chr3 (192-264)||(25049875-25049947)
chr3 (210-310)||(49296138-49296247)
chr3 (192-303)||(50902938-50903058)
chr3 (208-310)||(22489454-22489565)
chr3 (149-262)||(37455255-37455368)
chr3 (154-262)||(17946641-17946749)
chr3 (149-252)||(18750051-18750154)
chr3 (195-262)||(36673831-36673898)
chr3 (210-276)||(2118450-2118516)
chr3 (157-262)||(31645940-31646045)
chr3 (149-262)||(40897539-40897652)
chr3 (373-414)||(49458544-49458585)
chr3 (149-262)||(50761779-50761892)
chr3 (259-291)||(53836042-53836074)
[»] chr6 (29 HSPs)
chr6 (418-539)||(16438970-16439090)
chr6 (407-513)||(31534820-31534926)
chr6 (407-519)||(31975371-31975483)
chr6 (418-543)||(2607176-2607301)
chr6 (418-543)||(33640980-33641104)
chr6 (192-326)||(28900810-28900934)
chr6 (149-326)||(16438667-16438853)
chr6 (424-538)||(28900543-28900661)
chr6 (149-307)||(2606856-2607023)
chr6 (209-309)||(33641267-33641367)
chr6 (210-326)||(1463624-1463749)
chr6 (210-326)||(6788122-6788247)
chr6 (209-276)||(7835376-7835443)
chr6 (420-519)||(24194742-24194841)
chr6 (192-265)||(13461377-13461450)
chr6 (206-265)||(31975675-31975734)
chr6 (149-262)||(7497507-7497620)
chr6 (149-262)||(14262115-14262228)
chr6 (209-265)||(31996271-31996327)
chr6 (210-265)||(10113803-10113858)
chr6 (149-262)||(4200130-4200243)
chr6 (261-326)||(24194496-24194561)
chr6 (149-262)||(31067841-31067954)
chr6 (192-265)||(31535083-31535156)
chr6 (206-309)||(3000258-3000370)
chr6 (209-265)||(8779604-8779660)
chr6 (149-262)||(34758758-34758871)
chr6 (209-265)||(21199575-21199631)
chr6 (194-262)||(31896091-31896159)
[»] chr8 (44 HSPs)
chr8 (418-540)||(27878321-27878443)
chr8 (418-540)||(28018502-28018624)
chr8 (417-543)||(42423473-42423598)
chr8 (419-541)||(12522114-12522236)
chr8 (418-543)||(6387805-6387930)
chr8 (149-309)||(8029811-8029980)
chr8 (407-512)||(41394198-41394302)
chr8 (421-540)||(27915265-27915384)
chr8 (421-540)||(27961684-27961803)
chr8 (407-515)||(8029571-8029679)
chr8 (154-265)||(12522531-12522642)
chr8 (159-307)||(24082183-24082331)
chr8 (149-299)||(31625718-31625877)
chr8 (416-509)||(44976998-44977091)
chr8 (149-265)||(6388149-6388265)
chr8 (192-264)||(37131311-37131383)
chr8 (149-262)||(9288172-9288285)
chr8 (210-326)||(19484237-19484361)
chr8 (149-262)||(19717552-19717665)
chr8 (157-262)||(32497959-32498064)
chr8 (468-539)||(12737794-12737865)
chr8 (179-265)||(17234705-17234791)
chr8 (210-303)||(26856576-26856678)
chr8 (149-262)||(10295017-10295130)
chr8 (149-262)||(16364116-16364229)
chr8 (149-262)||(18958405-18958518)
chr8 (419-510)||(27974728-27974819)
chr8 (419-510)||(28031997-28032088)
chr8 (187-253)||(1527940-1528006)
chr8 (187-265)||(41393955-41394033)
chr8 (259-307)||(27915551-27915599)
chr8 (259-307)||(27961970-27962018)
chr8 (417-472)||(24082472-24082527)
chr8 (206-265)||(27878658-27878717)
chr8 (206-265)||(28018839-28018898)
chr8 (373-414)||(12522291-12522332)
chr8 (157-262)||(18305654-18305759)
chr8 (192-253)||(24067110-24067171)
chr8 (149-262)||(42305282-42305395)
chr8 (193-262)||(44725469-44725538)
chr8 (259-303)||(14781761-14781804)
chr8 (209-265)||(41252185-41252241)
chr8 (259-307)||(42423270-42423318)
chr8 (154-262)||(43308186-43308294)
[»] scaffold0013 (2 HSPs)
scaffold0013 (407-546)||(89541-89680)
scaffold0013 (147-265)||(89239-89357)
[»] scaffold1128 (1 HSPs)
scaffold1128 (149-296)||(888-1044)
[»] scaffold0573 (2 HSPs)
scaffold0573 (192-326)||(8860-8984)
scaffold0573 (424-538)||(9133-9251)
[»] scaffold0543 (1 HSPs)
scaffold0543 (149-262)||(10934-11047)
[»] scaffold0042 (1 HSPs)
scaffold0042 (147-303)||(57693-57858)
[»] scaffold0110 (1 HSPs)
scaffold0110 (157-265)||(39311-39419)
[»] scaffold0037 (1 HSPs)
scaffold0037 (409-465)||(36968-37024)
[»] scaffold0263 (1 HSPs)
scaffold0263 (259-326)||(422-489)
[»] scaffold0421 (1 HSPs)
scaffold0421 (216-265)||(1727-1776)
[»] scaffold1504 (1 HSPs)
scaffold1504 (149-262)||(1276-1389)


Alignment Details
Target: chr5 (Bit Score: 168; Significance: 9e-90; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 168; E-Value: 9e-90
Query Start/End: Original strand, 116 - 327
Target Start/End: Original strand, 34218397 - 34218608
Alignment:
Q  116 aatcatttattgggcccaagctagccttgccaccaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatc 215  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| ||||| |||||| |||||||||||    
T  34218397 aatcatttattgggcccaagctagccttgccaccaatattccgcaaattgagtgttaacactctgagtttaccaagtttacgtttttagataccaaaatc 34218496  T
Q  216 gtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttaccatgtt 315  Q
    ||||||||||| ||||||| ||| ||| || ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||    
T  34218497 gtgttaattcgaaggtaaattcggtttctgctaaaatcagaaggtttgaccgagttaatactcagtaaattcgtgtaaactcgaccgagtttaccgtgtt 34218596  T
Q  316 ttacgagtttaa 327  Q
    ||||||||||||    
T  34218597 ttacgagtttaa 34218608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 143; E-Value: 7e-75
Query Start/End: Original strand, 373 - 543
Target Start/End: Original strand, 34218655 - 34218825
Alignment:
Q  373 caaaacctaattcattttctacaaattcaaagactgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagtta 472  Q
    |||||||||||| |||||||||||| ||||||| |||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||    
T  34218655 caaaacctaatttattttctacaaactcaaagaatgaaacgtgtctttttctctcttctctgagttctcaaaccatgaataggggagcacatatcagtta 34218754  T
Q  473 gggttgcaatttcgacagtggaaattcagatttcgacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    ||||||||||| |||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  34218755 gggttgcaattccgacggtggaaattcagatttcgacgccggtgattgtgacgtcagttagggttgcggtg 34218825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 8 - 82
Target Start/End: Original strand, 34218289 - 34218363
Alignment:
Q  8 cataagcaagctagtagattgcaaatcatatcttcaactttttaacttctcccatgcaccaccattgccccaaac 82  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34218289 cataagcaagctagtagattgcaaatcatatcttcaactttttaacttctcccatgcaccaccattgccccaaac 34218363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 148 - 309
Target Start/End: Complemental strand, 5651328 - 5651158
Alignment:
Q  148 ccaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggt 247  Q
    ||||| |||||||||| |||||||||||||| ||||||| | | ||||| | ||||  ||||||||||||||||| ||||||||||||||||||| ||||    
T  5651328 ccaatgttccgcaaatcgagtgttaacacttcgagtttatcgattttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggt 5651229  T
Q  248 -aaaatcagaag--------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttac 309  Q
     ||| | | |||        |||||||||||||||||||||||||| ||||||||| ||| ||||||||||    
T  5651228 gaaattgaaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggccgagtttac 5651158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 4240258 - 4240095
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||||||||||||||||| || |||| ||||| | ||||| ||||||  | | ||||||||||||| || |||||||||||  ||| |||||    
T  4240258 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtgcaaaaatcgtgttaactctgaggtaaactccgtttctggta 4240159  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         |||||||  ||||||||||| ||||| ||||||||||||||||||    
T  4240158 aaatcggaaggtttaacgagtttgacaaagttaacactcggtaaactcgtgtaaactcgaccga 4240095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 259
Target Start/End: Complemental strand, 1460938 - 1460828
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||||||| ||||| | ||||| ||||||  ||| ||||| ||||||| || |||||||||||| ||| |||||    
T  1460938 caatgttccgcaaatcgagtgttaactctttgagattaccgagtttacgtttttaggtacaaaaattgtgttaactcagaggtaaactcggtttctggta 1460839  T
Q  249 aaatcagaagg 259  Q
    ||||| |||||    
T  1460838 aaatcggaagg 1460828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 210 - 326
Target Start/End: Complemental strand, 7125244 - 7125119
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac---------cgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| ||| |||||||         ||||||||||||||||||| ||||||||| |||      
T  7125244 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggg 7125145  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||| ||||||||    
T  7125144 cgagtttaccgttttttgcgagttta 7125119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 39852780 - 39852893
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| |||||||||||||    
T  39852780 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 39852879  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  39852880 aaattggaaggttt 39852893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 468 - 543
Target Start/End: Complemental strand, 29716683 - 29716608
Alignment:
Q  468 agttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    |||||||||||| |||||||| |||||||||||| ||||||| ||| |||||  |||||||||||||||| |||||    
T  29716683 agttagggttgcgatttcgacggtggaaattcagttttcgacaccgatgattacgacgtcggttagggttacggtg 29716608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 253
Target Start/End: Complemental strand, 16548974 - 16548881
Alignment:
Q  160 aaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||| |||||||||| | ||||||||| | | ||||| ||||||  |||||||||||||| || |||||||||||||| |||| ||||||||||    
T  16548974 aaatcgagtgttaactcattgagtttatcgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcaatttctggtaaaatc 16548881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 209 - 298
Target Start/End: Original strand, 25868820 - 25868909
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgtaaactcg 298  Q
    ||||| |||||||| ||||||||||||||| |||||||| ||||| ||| |||||||||||| |||||    |||| |||||||||||||    
T  25868820 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgaccgagtgaacacgtgttaaactcgtgtaaactcg 25868909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 29716888 - 29716815
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| ||||||  || |||||||||||||| ||| ||||||||| ||||| ||||||||||||||||||||||    
T  29716888 tttacgtttttaggtatcaaaatcgtgttaactcgaaggtaaacttgatttctggtaaaatcagaaggtttgac 29716815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 40013492 - 40013384
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||| ||  ||| ||||| | ||||||||||||| ||  ||||||||||||| || |||||||| ||| ||| |||||||||     
T  40013492 ttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtataaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaatt 40013393  T
Q  254 agaaggttt 262  Q
     ||||||||    
T  40013392 ggaaggttt 40013384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 21238856 - 21238783
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||| ||  ||||| |||||||| ||||||||||||||| |||||||||||||| ||| |||||||    
T  21238856 tttacgtttttagatggcaaaaacgtgttaactcggaggtaaactcggtttttggtaaaatcggaaagtttgac 21238783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 21489904 - 21489977
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||||||||  |||||||||||||| |||||| || |||||| ||||| |||||||||| ||| |||||||    
T  21489904 tttacatttttaggtaccaaaatcgtgtcaattcgaagataaacttgatttctggtaaaatctgaatgtttgac 21489977  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 250
Target Start/End: Original strand, 29758667 - 29758768
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||||||||| ||||||||||||||| | || |||||| | | ||||| ||||||  || |||||||||||||| ||||||||| | | ||||| |||||    
T  29758667 caatattccgtaaattgagtgttaactcgttaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaactcggaggtagatttgatttctggta 29758766  T
Q  249 aa 250  Q
    ||    
T  29758767 aa 29758768  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 157 - 303
Target Start/End: Original strand, 37014272 - 37014426
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga 256  Q
    ||||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||   |    
T  37014272 cgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgaa 37014371  T
Q  257 aggttt---------gaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||         |||||||||||||||| ||||| |||||| |||||||||||    
T  37014372 aggtttaacgagtttgaccgagttaacactcggtaaactcgtgt-aactcgaccga 37014426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 4550050 - 4549937
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||| | ||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  4550050 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtgtttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 4549951  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  4549950 aaattggaaggttt 4549937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 13926341 - 13926454
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||| | | ||||| ||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  13926341 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 13926440  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  13926441 aaattggaaggttt 13926454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 253
Target Start/End: Complemental strand, 2675154 - 2675110
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    ||||| |||||||| |||||||||||||||||||||||| |||||    
T  2675154 caaaaacgtgttaactcggaggtaaactcgatttttggtgaaatc 2675110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 33892922 - 33892866
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| |||||||||||||||||||||| | ||||| ||| |||||||    
T  33892922 caaaaacgtgttaactcggaggtaaactcgatttttgatgaaatcggaaagtttgac 33892866  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Complemental strand, 28623188 - 28623137
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttacc 310  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||||||    
T  28623188 gtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttacc 28623137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 209 - 264
Target Start/End: Original strand, 34909613 - 34909668
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttga 264  Q
    ||||| |||||||||||||||||||||||| | |||||| ||||| ||| ||||||    
T  34909613 caaaaacgtgttaattcggaggtaaactcggtctttggtgaaatcggaaagtttga 34909668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 95; Significance: 3e-46; HSPs: 60)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 95; E-Value: 3e-46
Query Start/End: Original strand, 407 - 541
Target Start/End: Complemental strand, 32759944 - 32759810
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||| | |||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||| ||| |||| ||| |||||||||||||    
T  32759944 tgaaacatttctttttctttcttctctgagttctcaaaccatgaacaagggagcacatatcagttagggttgcgattccgacggtgaaaattcagatttc 32759845  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcgg 541  Q
    |||||||||||||| ||| ||||||||||||||||    
T  32759844 gacgccggtgattgcgacatcggttagggttgcgg 32759810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 407 - 543
Target Start/End: Original strand, 3593494 - 3593630
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    ||||| || |||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||| ||||  |||  |||||||||||||||||||||    
T  3593494 tgaaatgtttctttttctttcttctctaagttctcaatccatgaataggggagcacatatcagttagtgttgtgattctgacagtggaaattcagatttc 3593593  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    ||||||  |||||| |||  |||||||||||||||||    
T  3593594 gacgccaatgattgcgacaccggttagggttgcggtg 3593630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 76; E-Value: 7e-35
Query Start/End: Original strand, 407 - 538
Target Start/End: Complemental strand, 47371412 - 47371281
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    ||||| || |||||||||||||||||||||||||||||||| ||| | ||||||||||| || ||||||||||||||||||| ||||||| | |||||||    
T  47371412 tgaaatgtttctttttctttcttctctgagttctcaaaccacgaacatgggagcacataccaattagggttgcaatttcgacggtggaaacttagatttc 47371313  T
Q  507 gacgccggtgattgtgacgtcggttagggttg 538  Q
    ||||||||||||||  | | ||||||||||||    
T  47371312 gacgccggtgattgcaatgccggttagggttg 47371281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 157 - 307
Target Start/End: Complemental strand, 47371706 - 47371547
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga 256  Q
    ||||||| ||||||||||||| |||||||| | | ||||| |  |||  ||||||||||||||||| ||||||||||||||||||| |||||||||| ||    
T  47371706 cgcaaatcgagtgttaacactctgagtttatcgagtttacgtacttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcgga 47371607  T
Q  257 ag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttt 307  Q
    ||         |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  47371606 aggtttgccgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttt 47371547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 416 - 520
Target Start/End: Complemental strand, 49236831 - 49236727
Alignment:
Q  416 tctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggt 515  Q
    |||||||||||||||||| ||||||||||||||||| | ||||||||||| || |||||||||| |||||||| ||| ||||||||||||||||| || |    
T  49236831 tctttttctttcttctctaagttctcaaaccatgaacatgggagcacataccaattagggttgcgatttcgacggtgaaaattcagatttcgacgtcgat 49236732  T
Q  516 gattg 520  Q
    |||||    
T  49236731 gattg 49236727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 409 - 509
Target Start/End: Complemental strand, 48966331 - 48966231
Alignment:
Q  409 aaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcga 508  Q
    |||||| |||||||||||||||||| ||||||||||||||||| | |||||||||||  ||||| |||||||||| |||| ||||||||||| |||||||    
T  48966331 aaacgtttctttttctttcttctctaagttctcaaaccatgaacatgggagcacatactagttatggttgcaattccgacggtggaaattcaaatttcga 48966232  T
Q  509 c 509  Q
    |    
T  48966231 c 48966231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 149 - 264
Target Start/End: Complemental strand, 5494887 - 5494772
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||||||||||||||||| ||  ||| ||||| | ||||| ||||||  ||||||||||||||||| || |||||||||||| ||| |||||    
T  5494887 caatgttccgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctggta 5494788  T
Q  249 aaatcagaaggtttga 264  Q
    ||||||||||||||||    
T  5494787 aaatcagaaggtttga 5494772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 409 - 543
Target Start/End: Original strand, 25253787 - 25253921
Alignment:
Q  409 aaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcga 508  Q
    |||||| |||||||||||||| |  ||||||||||||| |||||| ||||| ||||| | ||||||||||| | | | || ||||||||||| |||||||    
T  25253787 aaacgtttctttttctttctttttcgagttctcaaaccttgaataagggagtacataccggttagggttgcgaatccaacggtggaaattcatatttcga 25253886  T
Q  509 cgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    |||||||||||| ||||||   |||||||||||||    
T  25253887 cgccggtgattgcgacgtcaaatagggttgcggtg 25253921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 5209509 - 5209391
Alignment:
Q  147 accaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttgg 246  Q
    |||||| |||||||||| ||||||||||||| |||||||| |   ||||| | ||||  ||||||||||||||||| |||||||| |||||||||| |||    
T  5209509 accaatgttccgcaaatcgagtgttaacactctgagtttatcgtttttacgtgtttaggtaccaaaatcgtgttaactcggaggtcaactcgatttctgg 5209410  T
Q  247 taaaatcagaaggtttgac 265  Q
    | ||||||||| |||||||    
T  5209409 tgaaatcagaaagtttgac 5209391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 424 - 538
Target Start/End: Complemental strand, 42304207 - 42304093
Alignment:
Q  424 tttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgattgtga 523  Q
    |||||| ||| ||||||||||||||||| ||||||||||||| || |||||||||  |||  ||| ||||||||||| ||||| ||||||||||||||||    
T  42304207 tttcttttctaagttctcaaaccatgaacaggggagcacataccatttagggttgtgattcagacggtggaaattcatatttcaacgccggtgattgtga 42304108  T
Q  524 cgtcggttagggttg 538  Q
    |   |||||||||||    
T  42304107 cactggttagggttg 42304093  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 407 - 515
Target Start/End: Complemental strand, 28403808 - 28403700
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| ||||||| ||||||| |||||||||||||||||||| |||||||||||||  ||||||||||   ||| ||||  || |||||||||||||    
T  28403808 tgaaacgtttctttttatttcttcactgagttctcaaaccatgaacaggggagcacataaaagttagggttatgattccgactatgaaaattcagatttc 28403709  T
Q  507 gacgccggt 515  Q
     ||||||||    
T  28403708 aacgccggt 28403700  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 9322254 - 9322144
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgt 291  Q
    ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||||||||||| |||||||||||| ||||| ||||||    
T  9322254 tttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggtttgactgagttaacactcggtaaactcgtgt 9322155  T
Q  292 aaactcgaccga 303  Q
     |||||||||||    
T  9322154 -aactcgaccga 9322144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 155 - 265
Target Start/End: Complemental strand, 35177344 - 35177233
Alignment:
Q  155 tccgcaaattgagtgtt-aacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    ||||||||| ||||||| ||||||  ||||||| ||||||||  ||||||  |||||||||||||||||||| |||||||||||||||| || |||||||    
T  35177344 tccgcaaatcgagtgtttaacactccgagtttatcaaatttatgtttttaggtaccaaaatcgtgttaattcagaggtaaactcgatttctgataaaatc 35177245  T
Q  254 agaaggtttgac 265  Q
     ||||| |||||    
T  35177244 ggaaggattgac 35177233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 208 - 326
Target Start/End: Complemental strand, 42304580 - 42304453
Alignment:
Q  208 ccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcagtaaattcgtgtaaactcg 298  Q
    |||||||| |||||||||||||||||||||| ||| |||||||||  ||||||||         |||||||||||||||  ||||| |||||||||||||    
T  42304580 ccaaaatcatgttaattcggaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgaccgagttaacactaggtaaactcgtgtaaactcg 42304481  T
Q  299 accgagtttaccatgttttacgagttta 326  Q
    |||||||||||   ||||||||||||||    
T  42304480 accgagtttactgagttttacgagttta 42304453  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 9192067 - 9192192
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaa---------ggtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| ||||||||||||||          |||||||||||||||||||||||||| ||||||||| |||      
T  9192067 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcagaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggg 9192166  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||| ||||||||    
T  9192167 cgagtttaccgttttttgcgagttta 9192192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 15834823 - 15834710
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| ||||||||||||| || |||||||| |||||||||||||    
T  15834823 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 15834724  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  15834723 aaattggaaggttt 15834710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 445 - 537
Target Start/End: Complemental strand, 35177073 - 35176981
Alignment:
Q  445 ccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgattgtgacgtcggttagggtt 537  Q
    ||||||| || ||||| |||| |||| |||||||| ||| |||| ||||||||||||||||||||| ||||||||| |||| |||||||||||    
T  35177073 ccatgaacagaggagcgcataccagtgagggttgcgattccgacggtggaaattcagatttcgacgtcggtgattgcgacgccggttagggtt 35176981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 4005110 - 4005235
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| ||| ||||         |||||||||||||||||||||| ||||||||| |||      
T  4005110 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggg 4005209  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||| ||||||||    
T  4005210 cgagtttaccgttttttgcgagttta 4005235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 209 - 310
Target Start/End: Original strand, 18954507 - 18954608
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttta 308  Q
    ||||| |||||||| ||||| ||||||||| |||||||| ||||| ||| |||||||||||||||||     |||| ||||||||||||| |||||||||    
T  18954507 caaaaacgtgttaactcggacgtaaactcggtttttggtgaaatcggaaagtttgaccgagttaacatgtgttaaactcgtgtaaactcgtccgagttta 18954606  T
Q  309 cc 310  Q
    ||    
T  18954607 cc 18954608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 418 - 543
Target Start/End: Complemental strand, 49452884 - 49452766
Alignment:
Q  418 tttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtga 517  Q
    |||||||||||||||| ||||||| |||       ||||||||| ||| ||||||||||||| ||| | || ||||||| ||| |||||||||||| | |    
T  49452884 tttttctttcttctctaagttctcgaac-------aggggagcatataccagttagggttgcgattccaacggtggaaagtcatatttcgacgccgttta 49452792  T
Q  518 ttgtgacgtcggttagggttgcggtg 543  Q
    ||| |||| |||||||||||||||||    
T  49452791 ttgcgacgccggttagggttgcggtg 49452766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 192 - 309
Target Start/End: Complemental strand, 32760195 - 32760069
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaagg---------tttgaccgagttaacactcagta 282  Q
    ||||| ||||||  ||||||||||||||||| || |||||||||||| ||| | |||||||| | |||         |||||||||||||||||||| ||    
T  32760195 tttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgggaggcttaacgagtttgaccgagttaacactcacta 32760096  T
Q  283 aattcgtgtaaactcgaccgagtttac 309  Q
    || |||||||||||||| |||||||||    
T  32760095 aactcgtgtaaactcgatcgagtttac 32760069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 8141022 - 8140909
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||| | | ||||| ||||||  ||| ||||||||||||| || |||||||| ||||||| |||||    
T  8141022 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 8140923  T
Q  249 aaatcagaaggttt 262  Q
    |||| |||||||||    
T  8140922 aaattagaaggttt 8140909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 324
Target Start/End: Original strand, 25253486 - 25253659
Alignment:
Q  160 aaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaag- 258  Q
    |||| |||||||||  || |||||||||| | ||||  ||||||  |||||||||||||||||| | |||||||| ||| ||| ||||||| || ||||     
T  25253486 aaatcgagtgttaattctctgagtttaccgagtttatgtttttaggtaccaaaatcgtgttaatactgaggtaaattcggtttctggtaaactcggaaga 25253585  T
Q  259 --------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttaccatgttttacgagtt 324  Q
            ||||||| ||||||||| || ||||| || ||||||||||| ||||||||||  ||||||||||||    
T  25253586 tttgacgagtttgactgagttaacattcggtaaactcttgtaaactcgatcgagtttaccgagttttacgagtt 25253659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 41353464 - 41353588
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaa---------ggtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| |||          |||||||||||||||||||||||||| |||||| || |||      
T  41353464 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcggg 41353563  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||||||||||||    
T  41353564 cgagtttaccgt-ttttacgagttta 41353588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 51106935 - 51107060
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||| ||||||||||| |||||||||| ||| ||||         |||||||||||||||||||||| ||||||||| |||      
T  51106935 aaaaacgtgttaactcggaggaaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggg 51107034  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||| ||||||||    
T  51107035 cgagtttaccgttttttgcgagttta 51107060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 154 - 309
Target Start/End: Complemental strand, 28404080 - 28403916
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||| ||| || |||||  | ||||||||||||  ||||||||||||||||| | | ||||||| ||| ||| |  |||||||    
T  28404080 ttccgcaaatcgagtgttaactcttcgaatttactgagtttacatttttaggtaccaaaatcgtgttaacttgaaggtaaattcggtttctaataaaatc 28403981  T
Q  254 agaaggtttgac---------cgagttaacactcagtaaattcgtgtaaactcgaccgagtttac 309  Q
      || |||||||         ||||||||||||| ||||| || |||||||||||||||||||||    
T  28403980 gaaatgtttgacgaatttgaccgagttaacactcggtaaactcatgtaaactcgaccgagtttac 28403916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 45272976 - 45273092
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||| | | ||||| ||||||  ||| ||||| ||||||| || |||||||||||| ||| |||||    
T  45272976 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 45273075  T
Q  249 aaatcagaaggtttgac 265  Q
    ||||| |||||||||||    
T  45273076 aaatcggaaggtttgac 45273092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 149 - 308
Target Start/End: Complemental strand, 48966630 - 48966462
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| ||| |||||| ||| ||||||||  | ||||| | ||||  ||||||||||||||||| || |||||||||| ||||| || |     
T  48966630 caatgttccgcaaatcgagggttaactcttcgagtttactgagtttacgtgtttaggtaccaaaatcgtgttaactctgaggtaaacttgatttctgatg 48966531  T
Q  249 aaatcagaaggtt---------tgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttta 308  Q
    ||||  |||||||         |||||||||||| |||| ||||| |||||||||||| ||||||||||    
T  48966530 aaattggaaggtttgacgagtttgaccgagttaatactcggtaaactcgtgtaaactctaccgagttta 48966462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 46328395 - 46328558
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| || ||    
T  46328395 caatgttccgcaaatcgagtgttaattctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctgtta 46328494  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         ||||||  |||||||||||| ||||| ||||||||||||||||||    
T  46328495 aaatcggaaggtttaacgagtttgattgagttaacactcggtaaactcgtgtaaactcgaccga 46328558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 147 - 265
Target Start/End: Complemental strand, 49453202 - 49453083
Alignment:
Q  147 accaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaa-tcgtgttaattcggaggtaaactcgatttttg 245  Q
    |||||| |||||||||| ||||||||||  |  ||||||||| | ||||  | ||||  |||||||| ||||||||| || |||||||||||||||| ||    
T  49453202 accaatgttccgcaaatcgagtgttaactgtccgagtttacctagtttatgtgtttaggtaccaaaaatcgtgttaactctgaggtaaactcgatttctg 49453103  T
Q  246 gtaaaatcagaaggtttgac 265  Q
    | ||||||| ||||||||||    
T  49453102 gaaaaatcataaggtttgac 49453083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 179 - 253
Target Start/End: Complemental strand, 49971705 - 49971631
Alignment:
Q  179 tgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| | ||||| ||||||  |||||||||||||| || ||||||||||||||| ||| ||||||||||    
T  49971705 tgagtttaccgagtttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgttttctggtaaaatc 49971631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 49237105 - 49236989
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||| |||| ||||||||| |||| ||||||| | | ||||  | ||||  |||||||| ||||||||||||||| ||| |||| ||| |||||    
T  49237105 caatgttccgtaaatcgagtgttaatacttcgagtttatcgagtttatgtgtttaggtaccaaaaccgtgttaattcggagttaagctcggtttctggta 49237006  T
Q  249 aaatcagaaggtttgac 265  Q
    |||||  ||||||||||    
T  49237005 aaatcgaaaggtttgac 49236989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 1243384 - 1243329
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| ||| |||||||    
T  1243384 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgac 1243329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 3583690 - 3583579
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||| ||  ||||||||| | ||||| ||||||  |||| |||||||||||| |  || ||||||||| ||| | ||||||||    
T  3583690 ttccgcaaatcgagtgttaactctccgagtttaccgagtttacgtttttaggtaccgaaatcgtgttaacttagaagtaaactcggtttctagtaaaatc 3583591  T
Q  254 agaaggtttgac 265  Q
     ||| |||||||    
T  3583590 ggaaagtttgac 3583579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 190 - 265
Target Start/End: Complemental strand, 27257956 - 27257881
Alignment:
Q  190 aatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||| ||||||  |||||||||||||| || || |||||||||| |||||| ||||||||| ||| |||||||    
T  27257956 aatttacgtttttaggtaccaaaatcgtgtcaactccgaggtaaacttgattttcggtaaaatcggaatgtttgac 27257881  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 192 - 263
Target Start/End: Complemental strand, 34751668 - 34751597
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttg 263  Q
    ||||| |||||||||  ||||| |||||||| ||||||||||||||| |||||||| ||||| ||| |||||    
T  34751668 tttacgtttttaaatggcaaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttg 34751597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 38535935 - 38535772
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||| ||||| ||   || ||||| | ||||| ||||||  ||| ||||| ||||||| || |||||||||| | ||| |||||    
T  38535935 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38535836  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  38535835 aaatcggaagacttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 38535772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 38558153 - 38557990
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||| ||||| ||   || ||||| | ||||| ||||||  ||| ||||| ||||||| || |||||||||| | ||| |||||    
T  38558153 caatgttccgcaaatcgagttttaactctccaagattaccgagtttacgtttttagttacaaaaattgtgttaactctgaggtaaactgggtttctggta 38558054  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  38558053 aaatcggaagacttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 38557990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 3593271 - 3593344
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    |||| |||||||  || |||||||||||||| ||||||||||| ||||||| |  ||||||| |||||||||||    
T  3593271 tttatatttttaggtatcaaaatcgtgttaactcggaggtaaattcgatttctaataaaatcggaaggtttgac 3593344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 6312985 - 6313098
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  6312985 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 6313084  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  6313085 aaattggaaggttt 6313098  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 15927292 - 15927397
Alignment:
Q  160 aaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaagg 259  Q
    |||| ||||||||| |||||||||||| | | ||||  | ||||| ||||||||| ||||||| || |||||||| ||| ||| || ||||||| ||| |    
T  15927292 aaatcgagtgttaatactttgagtttatcgagtttaagtgtttaagtaccaaaattgtgttaactctgaggtaaattcggtttctgataaaatcggaaag 15927391  T
Q  260 tttgac 265  Q
    ||||||    
T  15927392 tttgac 15927397  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 25612501 - 25612614
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  25612501 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 25612600  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  25612601 aaattggaaggttt 25612614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 29396223 - 29396110
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  29396223 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29396124  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  29396123 aaattggaaggttt 29396110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 7798542 - 7798598
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| ||||||||||||||| |||||||| ||||| ||| |||||||    
T  7798542 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 7798598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 192 - 252
Target Start/End: Original strand, 8122214 - 8122274
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaat 252  Q
    ||||| |||||||||||||||||||||| || ||| |  |||||||| |||||||||||||    
T  8122214 tttacgtttttaaataccaaaatcgtgtaaactcgaacttaaactcgttttttggtaaaat 8122274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 33886939 - 33886883
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| ||||||||||||||| |||||||| ||||| ||| |||||||    
T  33886939 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 33886883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 33957311 - 33957367
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| ||||||||||||||| |||||||| ||||| ||| |||||||    
T  33957311 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 33957367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 8147418 - 8147469
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttacc 310  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||||||    
T  8147418 gtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttacc 8147469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 310
Target Start/End: Original strand, 26757716 - 26757767
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttacc 310  Q
    |||||||||||||||||||||||||| |||||| || |||  ||||||||||    
T  26757716 gtttgaccgagttaacactcagtaaactcgtgtgaaatcgggcgagtttacc 26757767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 252
Target Start/End: Original strand, 8147360 - 8147402
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaat 252  Q
    |||| |||||||| ||||||||||||||||||| |||||||||    
T  8147360 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaat 8147402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 262
Target Start/End: Original strand, 18798904 - 18798974
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||||||||    
T  18798904 tttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggttt 18798974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Original strand, 52182370 - 52182412
Alignment:
Q  211 aaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    ||||||||| |||||||||||||| ||||||| ||||||||||    
T  52182370 aaatcgtgtcaattcggaggtaaattcgatttctggtaaaatc 52182412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 34019168 - 34019217
Alignment:
Q  216 gtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||| ||||||||||| |||||||||||| ||||| ||| |||||||    
T  34019168 gtgttaactcggaggtaaattcgatttttggtgaaatcggaaagtttgac 34019217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 49452976 - 49452935
Alignment:
Q  373 caaaacctaattcattttctacaaattcaaagactgaaacgt 414  Q
    ||||||| |||||||||||||||| | |||||||||||||||    
T  49452976 caaaaccaaattcattttctacaagtccaaagactgaaacgt 49452935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #55
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 259 - 296
Target Start/End: Complemental strand, 49453080 - 49453043
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaact 296  Q
    |||||||||||||||||||| ||||| |||||||||||    
T  49453080 gtttgaccgagttaacactcggtaaactcgtgtaaact 49453043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #56
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 51702004 - 51702117
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||| ||||||| || |||||||| ||| ||| |||||    
T  51702004 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaaatcggtttctggta 51702103  T
Q  249 aaatcagaaggttt 262  Q
    |||| | |||||||    
T  51702104 aaattaaaaggttt 51702117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #57
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 291
Target Start/End: Complemental strand, 11579120 - 11579088
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgt 291  Q
    |||||||||||||||||||||||||| ||||||    
T  11579120 gtttgaccgagttaacactcagtaaactcgtgt 11579088  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #58
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 25830919 - 25830876
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||    
T  25830919 gtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 25830876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #59
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 48177112 - 48177069
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||    
T  48177112 gtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 48177069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #60
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 210 - 262
Target Start/End: Original strand, 49231477 - 49231529
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    ||||||||||||| || |||||||||||| ||| ||||| |||| ||||||||    
T  49231477 aaaatcgtgttaactctgaggtaaactcggtttctggtataatcggaaggttt 49231529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 93; Significance: 5e-45; HSPs: 41)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 93; E-Value: 5e-45
Query Start/End: Original strand, 407 - 543
Target Start/End: Complemental strand, 38295567 - 38295431
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||| |||| ||||||||||| |||||    
T  38295567 tgaaacgtttctttttctttcttctctgagttctcaaaccataaacaggggagcacataccagttagggttgcgattccgactgtggaaattcatatttc 38295468  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    || | |||||||||||||| |||||||||||||||||    
T  38295467 gatgtcggtgattgtgacgccggttagggttgcggtg 38295431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 85; E-Value: 3e-40
Query Start/End: Original strand, 407 - 543
Target Start/End: Original strand, 34342501 - 34342637
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||| | || ||||||||||| |||||    
T  34342501 tgaaacgtttctttttctttcttctccgagttctcaaaccatgaataagggagcacataccagttagggttgcgattccaacggtggaaattcatatttc 34342600  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    ||||| ||| |||| ||||||||||||||||| ||||    
T  34342601 gacgctggtaattgcgacgtcggttagggttgtggtg 34342637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 407 - 543
Target Start/End: Complemental strand, 31847010 - 31846874
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| ||||||||||| ||||||||||||||||||||| || ||||||||||||| ||||||||||||| ||| ||||  |||||||| |||||||    
T  31847010 tgaaacgtttctttttcttttttctctgagttctcaaaccataaacaggggagcacataccagttagggttgcgattccgacgatggaaatttagatttc 31846911  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
     ||||| ||||||| ||||   |||||||||||||||    
T  31846910 aacgccagtgattgcgacgcttgttagggttgcggtg 31846874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 407 - 539
Target Start/End: Original strand, 40829891 - 40830022
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| |||||||||||||||||| ||||||||||||||||| |||||||||  || ||||||||||||| |||| ||| |||||||||||||||||    
T  40829891 tgaaacgtttctttttctttcttctctaagttctcaaaccatgaacaggggagcatgtaccagttagggttgcgattttgacggtggaaattcagatttc 40829990  T
Q  507 gacgccggtgattgtgacgtcggttagggttgc 539  Q
     |||| | |||||| |||| |||||||||||||    
T  40829991 cacgctgatgattgcgacg-cggttagggttgc 40830022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 149 - 253
Target Start/End: Original strand, 15224191 - 15224295
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||||||  ||||||||||| ||||| | ||||  ||||||||||||||||| || |||||||||||||||| ||||     
T  15224191 caatgttccgcaaatcgagtgttaacactccgagtttaccaattttacgtgtttaggtaccaaaatcgtgttaactcagaggtaaactcgatttctggtg 15224290  T
Q  249 aaatc 253  Q
    |||||    
T  15224291 aaatc 15224295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 379340 - 379450
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||||||| ||||| ||||||| ||||||  ||| ||||||||||||| || |||||||| ||| |||||| ||    
T  379340 caatgttccgcaaatcgagtgttaactctttgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttttgata 379439  T
Q  249 aaatcagaagg 259  Q
    ||||| |||||    
T  379440 aaatcggaagg 379450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 260
Target Start/End: Complemental strand, 215049 - 214938
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||||||||||||||  |  ||| ||||| ||||||| ||||||  ||||||||||||||||| ||  ||||||||||  ||| |||||    
T  215049 caatgttccgcaaattgagtgttaactttccgagattaccgaatttacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcagtttctggta 214950  T
Q  249 aaatcagaaggt 260  Q
    ||||||||||||    
T  214949 aaatcagaaggt 214938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 154 - 309
Target Start/End: Original strand, 40829600 - 40829766
Alignment:
Q  154 ttccgcaaattgagtgttaacact--ttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaa 251  Q
    ||||| ||||||||||||||| ||    ||||||||| | | ||||||||||  || |||||||||||||| ||||||||||||||| ||| ||||||||    
T  40829600 ttccgtaaattgagtgttaactctccgagagtttaccgagtctacatttttaggtatcaaaatcgtgttaactcggaggtaaactcggtttctggtaaaa 40829699  T
Q  252 tcagaagg---------tttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttac 309  Q
    |   ||||         |||||||||||||||||||| |||| || |||||||||||||||||||||    
T  40829700 tagaaaggtttgacgaatttgaccgagttaacactcaataaactcatgtaaactcgaccgagtttac 40829766  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 149 - 298
Target Start/End: Complemental strand, 13833211 - 13833053
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||||||||| ||||||| ||| ||| ||| | | ||||| ||||||  ||| ||||||||||||| || ||||||||||| |||| | |||    
T  13833211 caatgttccgcaaattgaatgttaactcttcgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcaatttctagta 13833112  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcg 298  Q
    ||||||||||         ||||||| |||||||||||| ||||| |||||||||||||    
T  13833111 aaatcagaagatttaacaagtttgactgagttaacactcggtaaactcgtgtaaactcg 13833053  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 10657840 - 10657953
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||| |||| |||||||||| || |||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||| |||||||||||||    
T  10657840 caatgttccgtaaatcgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttttggta 10657939  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  10657940 aaattggaaggttt 10657953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 180 - 307
Target Start/End: Complemental strand, 2308823 - 2308687
Alignment:
Q  180 gagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga---------aggtttgaccgagt 270  Q
    |||||||  |||||||| ||||||  ||||||||||||||||| ||||||||||| ||| ||| ||||||||||| |         | |||||||| |||    
T  2308823 gagtttattaaatttacgtttttatgtaccaaaatcgtgttaactcggaggtaaattcggtttgtggtaaaatcaaaaagtttgacaagtttgaccaagt 2308724  T
Q  271 taacactcagtaaattcgtgtaaactcgaccgagttt 307  Q
    |||||||| ||||| |||||||||||||| |||||||    
T  2308723 taacactcggtaaaatcgtgtaaactcgatcgagttt 2308687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 209 - 324
Target Start/End: Complemental strand, 38295798 - 38295674
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac---------cgagttaacactcagtaaattcgtgtaaactcga 299  Q
    |||||| ||||||||||||||| ||| | | ||| ||||||||||||||||||||||         ||||||||||||| ||||| ||||||||||||||    
T  38295798 caaaattgtgttaattcggaggaaaatttggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcga 38295699  T
Q  300 ccgagtttaccatgttttacgagtt 324  Q
    | |  ||||||| ||||||| ||||    
T  38295698 ctgtttttaccaagttttacaagtt 38295674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 209 - 275
Target Start/End: Original strand, 12877707 - 12877773
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaaca 275  Q
    ||||| |||||||| ||||||||||||||| |||||| | ||||| ||| |||||||||||||||||    
T  12877707 caaaaacgtgttaactcggaggtaaactcggtttttgatgaaatcggaaagtttgaccgagttaaca 12877773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 206 - 307
Target Start/End: Complemental strand, 18727730 - 18727620
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttg---------accgagttaacactcagtaaattcgtgtaaact 296  Q
    |||||||| |||||||| |||||||||||||||| || ||||||||||| || |||||         |||||||||||| ||  |||| |||||||||||    
T  18727730 taccaaaaccgtgttaactcggaggtaaactcgaattctggtaaaatcaaaaagtttgacgagtttcaccgagttaacattcgataaactcgtgtaaact 18727631  T
Q  297 cgaccgagttt 307  Q
    |||||||||||    
T  18727630 cgaccgagttt 18727620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 32242303 - 32242233
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    |||||||||| | |||||||||||||||||| || |||||||||| ||||| | |||||||||||| ||||    
T  32242303 tttacattttgagataccaaaatcgtgttaactctgaggtaaacttgatttcttgtaaaatcagaatgttt 32242233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 160 - 265
Target Start/End: Complemental strand, 3858551 - 3858446
Alignment:
Q  160 aaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaagg 259  Q
    ||||||||||||||| |   ||||| ||| ||||||| ||||||| |  |||||| |||| || | | |||||||||||||||||||||||||| ||| |    
T  3858551 aaattgagtgttaactcgccgagttaaccgaatttacgtttttaagtgtcaaaattgtgtcaacttgaaggtaaactcgatttttggtaaaatcggaatg 3858452  T
Q  260 tttgac 265  Q
    ||||||    
T  3858451 tttgac 3858446  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 25288573 - 25288686
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| || | ||||| ||  ||| ||||| | ||||||||||||  ||| ||||||||||||| || |||||||||||| ||| | |||    
T  25288573 caatgttccgcaaatcgaatattaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 25288672  T
Q  249 aaatcagaaggttt 262  Q
    ||||| ||||||||    
T  25288673 aaatcggaaggttt 25288686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 13898497 - 13898553
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||| ||| |||||||    
T  13898497 caaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 13898553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 14039114 - 14039170
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||| ||| |||||||    
T  14039114 caaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 14039170  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 408 - 543
Target Start/End: Complemental strand, 18727484 - 18727349
Alignment:
Q  408 gaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcg 507  Q
    ||||||| | |||| ||| ||| |||||||||| |||||||||| | | ||||||||| || |||||||||| ||| |||  | | |||||  |||| ||    
T  18727484 gaaacgttttttttacttccttatctgagttcttaaaccatgaacaagagagcacataccaattagggttgcgattccgatggggtaaatttcgattgcg 18727385  T
Q  508 acgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    || ||| |||||||||||  |||| |||||||||||    
T  18727384 acaccgatgattgtgacgctggttggggttgcggtg 18727349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 193 - 264
Target Start/End: Complemental strand, 37810979 - 37810908
Alignment:
Q  193 ttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttga 264  Q
    |||| |||||| || |||||| |||||||| ||||||||||||| |||||||||| |||||| || ||||||    
T  37810979 ttacgtttttagatgccaaaaacgtgttaaatcggaggtaaacttgatttttggtgaaatcataatgtttga 37810908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 33136028 - 33136139
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| || ||||   ||| | ||||  ||||||  ||| ||||||||||||| || |||||||||||||||| |||||    
T  33136028 caatgttccgcaaatcgagtgttaactctctgaga--accgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggta 33136125  T
Q  249 aaatcagaaggttt 262  Q
     |||| ||||||||    
T  33136126 taatcggaaggttt 33136139  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 310
Target Start/End: Complemental strand, 18900007 - 18899898
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac---------cgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| | |||||||| ||| |||||||         ||||||||||||||||||| |||||| || |||      
T  18900007 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcggg 18899908  T
Q  301 cgagtttacc 310  Q
    ||||||||||    
T  18899907 cgagtttacc 18899898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 28740086 - 28739973
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||  ||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  28740086 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttatgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28739987  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  28739986 aaattggaaggttt 28739973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 24025869 - 24025925
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| | |||| |||||||| |||||||||||||||||| |||||||    
T  24025869 caaaaacgtgttaacttggagataaactcggtttttggtaaaatcagaatgtttgac 24025925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 7027313 - 7027416
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  7027313 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 7027412  T
Q  249 aaat 252  Q
    ||||    
T  7027413 aaat 7027416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 253
Target Start/End: Original strand, 15926396 - 15926443
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||||||| || |||||||| |||||||||| ||||||||||    
T  15926396 taccaaaatcgtgtcaactcggaggttaactcgatttctggtaaaatc 15926443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 18177681 - 18177784
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||| |||| |||||||||  ||| ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  18177681 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18177780  T
Q  249 aaat 252  Q
    ||||    
T  18177781 aaat 18177784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 31847297 - 31847242
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    |||||| || ||| |||||||||||||| |||| || |||||||||||||||||||    
T  31847297 aaaatcatggtaactcggaggtaaactctatttctgataaaatcagaaggtttgac 31847242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 1833803 - 1833733
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    ||||| ||||||  || ||||||||||| |||| ||||||||| ||||||| ||||||||| |||| ||||    
T  1833803 tttacgtttttaggtaacaaaatcgtgtcaatttggaggtaaattcgatttctggtaaaataagaatgttt 1833733  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 211 - 253
Target Start/End: Complemental strand, 11153428 - 11153386
Alignment:
Q  211 aaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||||| ||||||||||||||| ||| ||||||||||    
T  11153428 aaatcgtgttaactcggaggtaaactcggtttctggtaaaatc 11153386  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 381 - 414
Target Start/End: Original strand, 9731236 - 9731269
Alignment:
Q  381 aattcattttctacaaattcaaagactgaaacgt 414  Q
    ||||||||||||||||| ||||||||||||||||    
T  9731236 aattcattttctacaaactcaaagactgaaacgt 9731269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 19948542 - 19948615
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||||||||  |  ||||| |||||||| ||||||||||||||  |||||||| ||||| ||| |||||||    
T  19948542 tttacatttttaggtggcaaaaacgtgttaactcggaggtaaactcagtttttggtgaaatcggaaagtttgac 19948615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 35404416 - 35404343
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| ||||||  |||| |||||||||||| |  |||||||||||| |||||||||||||  ||| |||||||    
T  35404416 tttacgtttttaggtaccgaaatcgtgttaacttagaggtaaactcggtttttggtaaaattggaaagtttgac 35404343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 3464131 - 3464174
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||    
T  3464131 gtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 3464174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 3991794 - 3991838
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    ||||| |||||||| ||||||||||||||| |||||||| |||||    
T  3991794 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaatc 3991838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 6224250 - 6224206
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| |||||||||||| ||||| || |||||||||||||||    
T  6224250 gtttgactgagttaacactcggtaaactcatgtaaactcgaccga 6224206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 491 - 543
Target Start/End: Original strand, 9731286 - 9731338
Alignment:
Q  491 tggaaattcagatttcgacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    ||||||||||||||| |||| || |||||| |||| || ||||||||||||||    
T  9731286 tggaaattcagattttgacgtcgatgattgcgacgccgattagggttgcggtg 9731338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 407 - 451
Target Start/End: Complemental strand, 35404149 - 35404105
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaa 451  Q
    |||||||| |||||||||||  |||| ||||||||||||||||||    
T  35404149 tgaaacgtttctttttcttttgtctccgagttctcaaaccatgaa 35404105  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 38413534 - 38413478
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| ||||| || ||||||||||||||| |||||||| ||||| ||| |||||||    
T  38413534 caaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 38413478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 217 - 265
Target Start/End: Original strand, 41978866 - 41978914
Alignment:
Q  217 tgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    |||||||||||||||||||||| |||||| | ||||| ||| |||||||    
T  41978866 tgttaattcggaggtaaactcggtttttgatgaaatcggaaagtttgac 41978914  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 88; Significance: 5e-42; HSPs: 42)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 88; E-Value: 5e-42
Query Start/End: Original strand, 407 - 550
Target Start/End: Original strand, 46286968 - 46287111
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| ||||||||||||||||| |||||||||||||||||||| ||||||||||| ||||||||||||| ||| | ||  |||||||||| |||||    
T  46286968 tgaaacgtttctttttctttcttctccgagttctcaaaccatgaataagggagcacataccagttagggttgcgattccaacgatggaaattcaaatttc 46287067  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtgatgatgt 550  Q
    ||| || ||||||| |||||||||||||||||||||| ||||||    
T  46287068 gactcccgtgattgcgacgtcggttagggttgcggtggtgatgt 46287111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 69; E-Value: 1e-30
Query Start/End: Original strand, 407 - 543
Target Start/End: Complemental strand, 24966335 - 24966199
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    ||||| || |||||||||||||||||||||||||||||||| ||| | ||||| ||||| || |||||||||| |||||||| ||||||| | |||||||    
T  24966335 tgaaatgtttctttttctttcttctctgagttctcaaaccacgaacatgggagtacataccaattagggttgcgatttcgacggtggaaacttagatttc 24966236  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    |||||||| |||||  | | |||||||||||||||||    
T  24966235 gacgccggagattgcaatgccggttagggttgcggtg 24966199  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 543
Target Start/End: Original strand, 32890144 - 32890269
Alignment:
Q  417 ctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtg 516  Q
    |||||||||||||| ||||||| |||||||||||| | ||||||||||| |||||| |||||| ||| | || ||||||||||| ||||||||| |||||    
T  32890144 ctttttctttcttccctgagttttcaaaccatgaacatgggagcacataccagttatggttgc-attccaacggtggaaattcatatttcgacgtcggtg 32890242  T
Q  517 attgtgacgtcggttagggttgcggtg 543  Q
    |||| |||| |||||||||||||||||    
T  32890243 attgcgacgccggttagggttgcggtg 32890269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 407 - 509
Target Start/End: Complemental strand, 53574149 - 53574047
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| |||||||||||||||||||||||||||||||||||| |||| |||| ||| |||||||||||   ||| |||| |||||||||| ||||||    
T  53574149 tgaaacgtttctttttctttcttctctgagttctcaaaccatgaacagggtagcatataccagttagggttctgattccgacggtggaaattccgatttc 53574050  T
Q  507 gac 509  Q
    |||    
T  53574049 gac 53574047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 418 - 515
Target Start/End: Complemental strand, 46862763 - 46862666
Alignment:
Q  418 tttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggt 515  Q
    ||||| |||||| ||||||||||||||||||||| |||||||||||||  |||||||||||| ||| |||| || |||||||||||||||||| ||||    
T  46862763 tttttttttcttttctgagttctcaaaccatgaacaggggagcacatactagttagggttgcgattccgacggtagaaattcagatttcgacgtcggt 46862666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 416 - 543
Target Start/End: Original strand, 33139061 - 33139188
Alignment:
Q  416 tctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggt 515  Q
    |||||||||||||| | ||||||||||||| | ||| | ||||||| ||| || |||||||||  ||| |||| |||||||||||||||||||| ||| |    
T  33139061 tctttttctttcttatatgagttctcaaactaagaacatgggagcagataccaattagggttgtgattccgacggtggaaattcagatttcgactccgat 33139160  T
Q  516 gattgtgacgtcggttagggttgcggtg 543  Q
    |||||  ||| |||||||||||||||||    
T  33139161 gattgcaacgccggttagggttgcggtg 33139188  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 417 - 543
Target Start/End: Complemental strand, 29509894 - 29509769
Alignment:
Q  417 ctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtg 516  Q
    ||||||||||||||  |||||| |||||||||||| | |||||||| || |||||| ||||||| || | || ||||||||||||| ||| |||||||||    
T  29509894 ctttttctttcttccttgagttttcaaaccatgaacatgggagcacgtaccagttatggttgca-ttccaacggtggaaattcagagttcaacgccggtg 29509796  T
Q  517 attgtgacgtcggttagggttgcggtg 543  Q
    |||| |||| | |||||||||||||||    
T  29509795 attgcgacgccagttagggttgcggtg 29509769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 206 - 288
Target Start/End: Original strand, 33138818 - 33138900
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcg 288  Q
    ||||||||||||||||| ||||||||||||||||||| |||||||||| ||||||||||| ||||||||| |  |||||||||    
T  33138818 taccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaaggtttgactgagttaacatttggtaaattcg 33138900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 54; E-Value: 9e-22
Query Start/End: Original strand, 206 - 326
Target Start/End: Original strand, 50517211 - 50517340
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcagtaaattcgtgtaaact 296  Q
    ||||||||||||||||| |  |||||||||||||||| |||||||||  ||||||||         |||||||||||||||| ||||| |||||||||||    
T  50517211 taccaaaatcgtgttaactttgaggtaaactcgatttctggtaaaattggaaggtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaact 50517310  T
Q  297 cgaccgagtttaccatgttttacgagttta 326  Q
    ||||||| ||||||  ||||||||||||||    
T  50517311 cgaccgattttaccgagttttacgagttta 50517340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 23671516 - 23671412
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||| |||| ||||||||||   ||||| | ||||  ||||||||||||||||| ||||||||||||||||||| ||||     
T  23671516 caatgttccgcaaatcgagtgttagcactctgagtttaccggttttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcgatttctggtg 23671417  T
Q  249 aaatc 253  Q
    |||||    
T  23671416 aaatc 23671412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 49834625 - 49834462
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||| ||||||||||||||| || | || ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| |||||    
T  49834625 caatgttccgtaaattgagtgttaactctctaagattaccgagtttacgtttttagctacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49834526  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         ||||||| ||||||| |||| ||||| ||||||||||||||||||    
T  49834525 aaatcggaaggtttaacgagtttgactgagttaatactcggtaaactcgtgtaaactcgaccga 49834462  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 206 - 326
Target Start/End: Complemental strand, 24966604 - 24966475
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttg---------accgagttaacactcagtaaattcgtgtaaact 296  Q
    ||||||||||||||||| ||||| ||||| ||| |||||||||||||  |||||||||         ||| ||||||||||  ||||| |||||||||||    
T  24966604 taccaaaatcgtgttaactcggaagtaaattcggtttttggtaaaatgggaaggtttgccgagtttgaccaagttaacacttggtaaactcgtgtaaact 24966505  T
Q  297 cgaccgagtttaccatgttttacgagttta 326  Q
    ||||||||||||||  ||||||||| ||||    
T  24966504 cgaccgagtttaccgagttttacgaattta 24966475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 29510208 - 29510092
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||||||| | | ||||| | ||||  || |||||||||||||| || || |||||||| |||| |||||    
T  29510208 caatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtgtttaggtatcaaaatcgtgttaactctgatgtaaactcaatttctggta 29510109  T
Q  249 aaatcagaaggtttgac 265  Q
    |||||||||||||||||    
T  29510108 aaatcagaaggtttgac 29510092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 32889857 - 32889973
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  || |||||| | ||||| | ||||  ||||||||||||||||| |  || |||||||| |||| |||||    
T  32889857 caatgttccgcaaatcgagtgttaactctccgaatttaccgagtttacgtgtttaggtaccaaaatcgtgttaactttgatgtaaactcaatttctggta 32889956  T
Q  249 aaatcagaaggtttgac 265  Q
    |||||||||||||||||    
T  32889957 aaatcagaaggtttgac 32889973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 5800374 - 5800537
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  5800374 caatgttccgcaaatcgagtgttaactctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcggtttctggta 5800473  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    | ||||||||         ||||||| ||||||||||||  |||| ||||||||||||||||||    
T  5800474 acatcagaaggtttaacgagtttgactgagttaacactcgataaactcgtgtaaactcgaccga 5800537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 28484310 - 28484469
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaa-tcgtgttaattcggaggtaaactcgatttttggtaaaat 252  Q
    ||||||||||||||||||||| || |||| ||||| | ||||| ||||||  ||| |||| ||||||||| || |||||||||||| ||| |||||||||    
T  28484310 ttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaagtcgtgttaactctgaggtaaactcggtttctggtaaaat 28484409  T
Q  253 cagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
      ||||         ||||||| ||||||||||||  |||| ||||||||||||||||||    
T  28484410 tggaaggtttaacgagtttgactgagttaacactcgataaactcgtgtaaactcgaccga 28484469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 149 - 299
Target Start/End: Complemental strand, 49501324 - 49501165
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||| |||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| |||||    
T  49501324 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49501225  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcga 299  Q
    ||||| ||||         ||||||| |||||||||||| ||||| ||||||||||||||    
T  49501224 aaatcggaaggtttaacgagtttgacggagttaacactcggtaaactcgtgtaaactcga 49501165  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 149 - 299
Target Start/End: Complemental strand, 49507389 - 49507230
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||| |||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| |||||    
T  49507389 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 49507290  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcga 299  Q
    ||||| ||||         ||||||| |||||||||||| ||||| ||||||||||||||    
T  49507289 aaatcggaaggtttaacgagtttgacggagttaacactcggtaaactcgtgtaaactcga 49507230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 149 - 259
Target Start/End: Original strand, 32322476 - 32322586
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||| | |||||||||| ||  ||| ||||| | ||||| ||||||  ||| |||||||||||||||| |||||||||||| ||| |||||    
T  32322476 caatgttccgcaagtcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcggtttctggta 32322575  T
Q  249 aaatcagaagg 259  Q
    ||||| |||||    
T  32322576 aaatcggaagg 32322586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 55165484 - 55165602
Alignment:
Q  147 accaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttgg 246  Q
    |||||| |||| ||||| ||||| |||| | | ||||||||  | ||||| ||||||  |||||||||||| |||| | ||||||||||| ||||| |||    
T  55165484 accaatgttccacaaatcgagtgctaactcgtcgagtttactgagtttacgtttttacgtaccaaaatcgtattaacttggaggtaaacttgatttatgg 55165583  T
Q  247 taaaatcagaaggtttgac 265  Q
    ||||||||||| |||||||    
T  55165584 taaaatcagaatgtttgac 55165602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 160 - 265
Target Start/End: Original strand, 871782 - 871886
Alignment:
Q  160 aaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaagg 259  Q
    |||| |||||||||| | | ||||||||| | ||||| ||||||  ||||||| |||||| || ||||||||||||||||||| |||||||||| ||| |    
T  871782 aaatcgagtgttaactcgtcgagtttaccgagtttacgtttttaggtaccaaa-tcgtgtcaactcggaggtaaactcgatttctggtaaaatcggaatg 871880  T
Q  260 tttgac 265  Q
    ||||||    
T  871881 tttgac 871886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 206 - 326
Target Start/End: Complemental strand, 26491208 - 26491079
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtt---------tgaccgagttaacactcagtaaattcgtgtaaact 296  Q
    ||||||||||||||||| |  |||||||||||| ||| ||||||||||||||||||         |||||||||||||| |  ||||| ||||||||| |    
T  26491208 taccaaaatcgtgttaaatttgaggtaaactcggtttctggtaaaatcagaaggtttgacgagtttgaccgagttaacatttggtaaactcgtgtaaatt 26491109  T
Q  297 cgaccgagtttaccatgttttacgagttta 326  Q
    |||  |||||||||  ||||||||||||||    
T  26491108 cgattgagtttaccgagttttacgagttta 26491079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 303
Target Start/End: Original strand, 29855969 - 29856089
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaag---------gtttgaccgagttaacactcagta 282  Q
    ||||| ||||||  ||| ||||||||||||| || |||||||||||||||| |||||||||  ||||         ||||||| |||||||||||| |||    
T  29855969 tttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggta 29856068  T
Q  283 aattcgtgtaaactcgaccga 303  Q
    || ||||||||||||||||||    
T  29856069 aactcgtgtaaactcgaccga 29856089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 41470408 - 41470341
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacac 276  Q
    ||||| |||||||| ||||||||||||||| |||||||| ||||  ||| ||||||||||||||||||    
T  41470408 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaattggaaagtttgaccgagttaacac 41470341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 159 - 262
Target Start/End: Original strand, 41725533 - 41725636
Alignment:
Q  159 caaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaag 258  Q
    ||||| |||||||||| ||  | | ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||||||||||| |||||||||| ||||    
T  41725533 caaatcgagtgttaactctccgtgattacctagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaag 41725632  T
Q  259 gttt 262  Q
    ||||    
T  41725633 gttt 41725636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 210 - 310
Target Start/End: Original strand, 29469185 - 29469294
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaa---------ggtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| |||          |||||||||||||||||||||||||| |||||| || |||      
T  29469185 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcggg 29469284  T
Q  301 cgagtttacc 310  Q
    ||||||||||    
T  29469285 cgagtttacc 29469294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 6487400 - 6487344
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||| ||| |||||||    
T  6487400 caaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 6487344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 37916318 - 37916362
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| |||||||||||||||||| ||||||||||||||||||    
T  37916318 gtttgactgagttaacactcagtaaactcgtgtaaactcgaccga 37916362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 461 - 515
Target Start/End: Complemental strand, 35518283 - 35518229
Alignment:
Q  461 acatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggt 515  Q
    ||||| ||||||||||||| |||||||| ||||||||||||||||| ||| ||||    
T  35518283 acataccagttagggttgcgatttcgaccgtggaaattcagatttcaacgtcggt 35518229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 192 - 262
Target Start/End: Complemental strand, 37828178 - 37828108
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    |||||||||||| |||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||||||||    
T  37828178 tttacatttttagatacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggttt 37828108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 231 - 284
Target Start/End: Original strand, 12754539 - 12754592
Alignment:
Q  231 taaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaa 284  Q
    |||||||  ||| |||||||||||||| |||||||||||||||||||| |||||    
T  12754539 taaactctgtttctggtaaaatcagaaagtttgaccgagttaacactcggtaaa 12754592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 27768474 - 27768587
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  27768474 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 27768573  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  27768574 aaattggaaggttt 27768587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 50018602 - 50018715
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||| |||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| |||||| |||||| || |||||||| ||| ||| |||||    
T  50018602 caatgttctgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 50018701  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  50018702 aaattggaaggttt 50018715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 210 - 309
Target Start/End: Original strand, 8084231 - 8084339
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaa---------ggtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| | |||||||| |||          |||||||||||||||||||||||||| |||||| || |||      
T  8084231 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcggg 8084330  T
Q  301 cgagtttac 309  Q
    |||||||||    
T  8084331 cgagtttac 8084339  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 259 - 326
Target Start/End: Original strand, 46286789 - 46286856
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttaccatgttttacgagttta 326  Q
    ||||||||||||||||||||  |||| || ||||||||||| | ||||||||  |||||| |||||||    
T  46286789 gtttgaccgagttaacactcgataaactcttgtaaactcgatcaagtttaccgagttttatgagttta 46286856  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 419 - 474
Target Start/End: Original strand, 55165803 - 55165858
Alignment:
Q  419 ttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagg 474  Q
    ||||||||||||| |||||| |||||||||||| ||  ||||||||| ||||||||    
T  55165803 ttttctttcttctttgagttatcaaaccatgaaaagatgagcacataccagttagg 55165858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 192 - 262
Target Start/End: Original strand, 5441855 - 5441925
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||||||||    
T  5441855 tttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggttt 5441925  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 30967134 - 30967021
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||||||||||| || ||| |||| | | ||| |||||    
T  30967134 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgagataaaattggtttctggta 30967035  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  30967034 aaattggaaggttt 30967021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 48261488 - 48261601
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | || |||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  48261488 caatgttccgcaaatcgagtgttaaatctccgagattatcgagttgacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 48261587  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  48261588 aaattggaaggttt 48261601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 51321266 - 51321379
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||  ||| | | ||||||||||||  ||| ||||||||||||| || || ||||| ||| ||| |||||    
T  51321266 caatgttccgcaaatcgagtgttaactctccgatattatcgagtttacatttttaggtacaaaaatcgtgttaactctgacgtaaaatcggtttctggta 51321365  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  51321366 aaattggaaggttt 51321379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 9972794 - 9972850
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| ||||| || ||||||||||||||| |||||||| ||||| ||| |||||||    
T  9972794 caaaaacgtgtaaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 9972850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 253
Target Start/End: Original strand, 51967298 - 51967342
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    ||||| |||||||| ||||||||||||||| |||||||| |||||    
T  51967298 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaatc 51967342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 87; Significance: 2e-41; HSPs: 49)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 416 - 550
Target Start/End: Original strand, 16709804 - 16709938
Alignment:
Q  416 tctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggt 515  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||| ||||||||||||||||| ||| ||||    
T  16709804 tctttttctttcttctctgagttctcaaaccatgaacaggggagcacataccagttagggttgcgattccgacggtggaaattcagatttcaacgtcggt 16709903  T
Q  516 gattgtgacgtcggttagggttgcggtgatgatgt 550  Q
    ||||| |||  | ||||||||||||||| ||||||    
T  16709904 gattgcgacaccagttagggttgcggtggtgatgt 16709938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 87; E-Value: 2e-41
Query Start/End: Original strand, 416 - 550
Target Start/End: Original strand, 17684040 - 17684174
Alignment:
Q  416 tctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggt 515  Q
    |||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||| ||||||||||||||||| ||| ||||    
T  17684040 tctttttctttcttctctgagttctcaaaccatgaacaggggagcacataccagttagggttgcgattccgacggtggaaattcagatttcaacgtcggt 17684139  T
Q  516 gattgtgacgtcggttagggttgcggtgatgatgt 550  Q
    ||||| |||  | ||||||||||||||| ||||||    
T  17684140 gattgcgacaccagttagggttgcggtggtgatgt 17684174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 77; E-Value: 2e-35
Query Start/End: Original strand, 419 - 543
Target Start/End: Original strand, 43172335 - 43172459
Alignment:
Q  419 ttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgat 518  Q
    ||||||||||||||| ||||||||| ||||||||||||||||||||| ||||||||||||| |||  |||  ||||||||||||||||||||||| ||||    
T  43172335 ttttctttcttctctaagttctcaatccatgaataggggagcacataccagttagggttgcgattctgacgatggaaattcagatttcgacgccgatgat 43172434  T
Q  519 tgtgacgtcggttagggttgcggtg 543  Q
    || |||  |||||||||||||||||    
T  43172435 tgcgacaccggttagggttgcggtg 43172459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 66; E-Value: 7e-29
Query Start/End: Original strand, 154 - 326
Target Start/End: Original strand, 42610583 - 42610764
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    ||||||||||||||||||||| || |||||||||| ||||||| | ||||  ||||||||||||||||| |  |||||||||| | ||| ||||||||||    
T  42610583 ttccgcaaattgagtgttaactctctgagtttaccgaatttacgtgtttaggtaccaaaatcgtgttaaatttgaggtaaacttggtttctggtaaaatc 42610682  T
Q  254 agaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttaccatgttttacgagttta 326  Q
    |||||         |||||||||||||||||||  ||||| ||||||||| ||||  |||||||||  ||||||||||||||    
T  42610683 agaaggtttgacgagtttgaccgagttaacactgggtaaactcgtgtaaattcgattgagtttaccgagttttacgagttta 42610764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 407 - 505
Target Start/End: Original strand, 23017256 - 23017354
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagattt 505  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | |||| |||||| ||||||||||||| |||  ||| ||||||||||||||||    
T  23017256 tgaaacgtttctttttctttcttctctgagttctcaaaccatgaacatgggaccacataccagttagggttgcgattctgacggtggaaattcagattt 23017354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 407 - 515
Target Start/End: Original strand, 21486408 - 21486516
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| |||||||||||||||||| ||| ||||||||||||| |||| ||||||||  |||||||||||  ||| ||||  ||||||||||||||||    
T  21486408 tgaaacgtttctttttctttcttctctaagtcctcaaaccatgaacagggaagcacatactagttagggttgtgattccgacgatggaaattcagatttc 21486507  T
Q  507 gacgccggt 515  Q
    |||||||||    
T  21486508 gacgccggt 21486516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 161 - 303
Target Start/End: Original strand, 21486115 - 21486266
Alignment:
Q  161 aattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaag-- 258  Q
    |||||||||||||| ||||||||||| | | |||||| ||||| ||| |||||||||||||| | | |||||||||||| |||||||||||| |||||      
T  21486115 aattgagtgttaactctttgagtttatcgagtttacacttttagatatcaaaatcgtgttaacttgaaggtaaactcgaattttggtaaaattagaaggt 21486214  T
Q  259 -------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
           |||||| ||||||||||||| ||||| ||||||||||||||||||    
T  21486215 ttgatgagtttgatcgagttaacactcggtaaactcgtgtaaactcgaccga 21486266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 32884179 - 32884333
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||| |||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||||| ||||| || |||||||||||  ||| |||||    
T  32884179 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgagttaactctgaggtaaactctgtttctggta 32884278  T
Q  249 aaatcagaaggtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||||||||| |||||||||||| ||||| |||||||||||| |||||    
T  32884279 aaatcggaaggtttgactgagttaacactcggtaaactcgtgtaaactcaaccga 32884333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 148 - 253
Target Start/End: Original strand, 43172114 - 43172219
Alignment:
Q  148 ccaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggt 247  Q
    ||||| |||||||||| |||||||||| || |||||||||| | ||||||||||||  || ||||||| |||||| ||||||||||||||||||| ||||    
T  43172114 ccaatgttccgcaaatcgagtgttaactctctgagtttaccgagtttacatttttaggtatcaaaatcatgttaactcggaggtaaactcgatttctggt 43172213  T
Q  248 aaaatc 253  Q
    ||||||    
T  43172214 aaaatc 43172219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 41827736 - 41827899
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||||||||||||||||| || |||| |||   | ||||| ||||||  ||| ||||||||||||| || |||||||||||  ||| |||||    
T  41827736 caatgttccgcaaattgagtgttaactctctgagattattgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggta 41827835  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||||||         ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  41827836 aaatcagaagatttaacaagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 41827899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 44121730 - 44121567
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    ||||||||||||||| |||||||||| || |||| ||||| ||||||| ||||||  ||| ||||||||||||| |  |||||||| ||| ||| |||||    
T  44121730 caatattccgcaaatcgagtgttaactctctgagattaccgaatttacgtttttaggtacaaaaatcgtgttaactatgaggtaaattcggtttctggta 44121631  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         ||||||| |||||||||||  ||||| ||||||||||||||||||    
T  44121630 aaatcggaaggcttaacgagtttgactgagttaacacttggtaaactcgtgtaaactcgaccga 44121567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 23016951 - 23017069
Alignment:
Q  147 accaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttgg 246  Q
    |||||| ||||  |||| ||||||||||| ||||||||||||||| |||| |||||| ||| |||||| ||||||| | ||||||||||||||||| | |    
T  23016951 accaatgttccataaatcgagtgttaacattttgagtttaccaaacttacgtttttacatatcaaaattgtgttaacttggaggtaaactcgatttctcg 23017050  T
Q  247 taaaatcagaaggtttgac 265  Q
    ||||||  |||| ||||||    
T  23017051 taaaattggaagatttgac 23017069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 29893380 - 29893543
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||||||||||| ||| ||||||||||||| || |||||||||||  ||| ||||     
T  29893380 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaagtacaaaaatcgtgttaactctgaggtaaactcagtttctggtg 29893479  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    |||||  |||         ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  29893480 aaatcgaaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 29893543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 156 - 262
Target Start/End: Complemental strand, 44256545 - 44256439
Alignment:
Q  156 ccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcag 255  Q
    |||||||| |||||||||| ||  ||| ||| | | ||||| |||||| |||| ||||||||||||| || |||||||||||||||| |||||||||| |    
T  44256545 ccgcaaatcgagtgttaactctccgagattatcgagtttacgtttttagatacaaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcgg 44256446  T
Q  256 aaggttt 262  Q
    |||||||    
T  44256445 aaggttt 44256439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 180 - 265
Target Start/End: Complemental strand, 26201898 - 26201813
Alignment:
Q  180 gagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||||| ||||||||||||||  |||||||||||||| || |||||||||||||| ||| ||| ||||||| ||| |||||||    
T  26201898 gagtttaccgaatttacatttttaggtaccaaaatcgtgtaaactcggaggtaaactcaattattgctaaaatcggaatgtttgac 26201813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 417 - 540
Target Start/End: Complemental strand, 5771947 - 5771824
Alignment:
Q  417 ctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtg 516  Q
    ||||||||||||| ||||||||||||||  ||||| | | ||||||||| ||||||||||| | ||| |||||| |||||||| || | | || ||||||    
T  5771947 ctttttctttcttatctgagttctcaaaagatgaacatgagagcacataccagttagggttacgattccgacaggggaaattctgactgcaacaccggtg 5771848  T
Q  517 attgtgacgtcggttagggttgcg 540  Q
    || ||||||  |||||| ||||||    
T  5771847 atcgtgacgctggttagagttgcg 5771824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 29585922 - 29586081
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||| ||||||||||||| || |||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||| ||| |||  ||||    
T  29585922 caatgttccgcagattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaagtcggtttcgggta 29586021  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcga 299  Q
    ||||| ||||         ||||||| |||||||||||| ||||| ||||||||||||||    
T  29586022 aaatcggaaggtttaatgagtttgactgagttaacactcggtaaactcgtgtaaactcga 29586081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 37328315 - 37328478
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| ||||||| || ||  ||| ||| | | ||||| ||||||  ||| ||||||||||||| ||  ||||||||||||||| |||||    
T  37328315 caatgttccgcaaatcgagtgttgactctccgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaactcgatttctggta 37328414  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  37328415 aaatcggaaggtttaacgtgtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 37328478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 7993565 - 7993678
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | | || |||||||| ||| ||||||||||||| |  |||||||||||| ||| |||||    
T  7993565 caatgttccgcaaatcgagtgttaactctccgagattaccgagtatatatttttaagtacaaaaatcgtgttaactatgaggtaaactcggtttctggta 7993664  T
Q  249 aaatcagaaggttt 262  Q
    ||||| ||||||||    
T  7993665 aaatcggaaggttt 7993678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 18838818 - 18838931
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  18838818 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 18838917  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  18838918 aaattggaaggttt 18838931  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 291
Target Start/End: Complemental strand, 37915974 - 37915893
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgt 291  Q
    |||| ||| |||| || |||||||||||||||| ||||||||||  |  |||||||||||||||||||||||||| ||||||    
T  37915974 aaaagcgttttaactcagaggtaaactcgatttatggtaaaatcgaacagtttgaccgagttaacactcagtaaactcgtgt 37915893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 37972674 - 37972561
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| ||||||||||  | |||| ||||| | ||||| ||||||  ||||||||||||||||| || ||| |||||||  ||| |||||    
T  37972674 caatgttccgcaaatcgagtgttaactttctgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgagataaactcagtttctggta 37972575  T
Q  249 aaatcagaaggttt 262  Q
    ||||| ||||||||    
T  37972574 aaatcggaaggttt 37972561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 157 - 265
Target Start/End: Original strand, 12740786 - 12740894
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga 256  Q
    ||||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||||||||||||||||| || |||||||||||| | | |||||||||  ||    
T  12740786 cgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtgtctggtaaaattgga 12740885  T
Q  257 aggtttgac 265  Q
    |||||||||    
T  12740886 aggtttgac 12740894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 48136982 - 48136862
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtt---------tgaccgagttaacactcagta 282  Q
    ||||| ||||||  ||||||||||||||||| || |||||||||||  ||| ||||||||| ||||||||         |||| ||||||||||||  ||    
T  48136982 tttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcagtttctggtaaaattagaaggtttgacgagtttgactgagttaacactcgata 48136883  T
Q  283 aattcgtgtaaactcgaccga 303  Q
    |||||||||||||||||||||    
T  48136882 aattcgtgtaaactcgaccga 48136862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 208 - 263
Target Start/End: Complemental strand, 11735270 - 11735215
Alignment:
Q  208 ccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttg 263  Q
    ||||||||||||||| ||||||||||||||||||| |||||||||| ||| |||||    
T  11735270 ccaaaatcgtgttaactcggaggtaaactcgatttctggtaaaatcggaatgtttg 11735215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 407 - 477
Target Start/End: Original strand, 27149104 - 27149174
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggtt 477  Q
    |||| ||| ||||| |||||||||| ||||||||||||||||||| || | |||||||| |||||||||||    
T  27149104 tgaagcgtttctttctctttcttctttgagttctcaaaccatgaacagtgaagcacataccagttagggtt 27149174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 16709396 - 16709510
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||||||  |||||||||| | |||||||||| | ||||| ||||||  ||||||||||||| ||| || |||||||||||    |||||||    
T  16709396 caatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactc--agtttggta 16709493  T
Q  249 aaatcagaaggtttgac 265  Q
    || || |||||||||||    
T  16709494 aactcggaaggtttgac 16709510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 265
Target Start/End: Original strand, 17683632 - 17683746
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||||||  |||||||||| | |||||||||| | ||||| ||||||  ||||||||||||| ||| || |||||||||||    |||||||    
T  17683632 caatgttccgcaaatcaagtgttaacattatgagtttaccgagtttacgtttttaggtaccaaaatcgtggtaactctgaggtaaactc--agtttggta 17683729  T
Q  249 aaatcagaaggtttgac 265  Q
    || || |||||||||||    
T  17683730 aactcggaaggtttgac 17683746  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 28034645 - 28034532
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| || |||| ||||| | ||||| ||||||  ||| ||||||||||||| || || ||||| ||| ||| |||||    
T  28034645 caatgttccgcaaatcgagtgttaactctctgagattaccgagtttacgtttttatgtacaaaaatcgtgttaactctgatgtaaaatcggtttctggta 28034546  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  28034545 aaattggaaggttt 28034532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 33497189 - 33497116
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||||||||| || ||||||||||| || ||||||||||||||||||| || ||||||  ||| |||||||    
T  33497189 tttacatttttaagtatcaaaatcgtgtcaactcggaggtaaactcgatttctgataaaattggaatgtttgac 33497116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 33892031 - 33891918
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||||| ||||| ||||||  ||| ||||||||||||| ||  ||||||| ||| ||| |||||    
T  33892031 caatgttccgcaaatcgagtgttaactctccgagattaccaagtttacgtttttaggtacaaaaatcgtgttaactctaaggtaaaatcggtttctggta 33891932  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  33891931 aaattggaaggttt 33891918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 40460506 - 40460398
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||| ||| ||| ||||| | |||||  |||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||     
T  40460506 ttccgcaaatcgagtgttaactcttcgagattaccgagtttacgcttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaatt 40460407  T
Q  254 agaaggttt 262  Q
     ||||||||    
T  40460406 ggaaggttt 40460398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 224 - 310
Target Start/End: Complemental strand, 37392688 - 37392603
Alignment:
Q  224 tcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttacc 310  Q
    |||||| |||||| |||||||||| ||||||||| |||||| |||||||||||    |||| ||| ||||||||| |||||||||||    
T  37392688 tcggagataaacttgatttttggtgaaatcagaaagtttgatcgagttaacacgtgttaaactcg-gtaaactcgtccgagtttacc 37392603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 510054 - 510167
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  510054 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 510153  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  510154 aaattggaaggttt 510167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 326
Target Start/End: Complemental strand, 4639952 - 4639828
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| |||||||||||||| |||| |||||||||| |||          |||||||||||||||||||||||||| || ||| || |||      
T  4639952 aaaaacgtgttaactcggaggtaaactctatttctggtaaaatcggaaattttgacgagtttgaccgagttaacactcagtaaactcatgtgaaatcggg 4639853  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||||||||||||    
T  4639852 cgagtttaccgt-ttttacgagttta 4639828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 210 - 310
Target Start/End: Original strand, 14741448 - 14741557
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaa---------ggtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| | |||||||| |||          |||||||||||||||||||||||||| |||||| || |||      
T  14741448 aaaaacgtgttaactcggaggtaaactcgatttctagtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcggg 14741547  T
Q  301 cgagtttacc 310  Q
    ||||||||||    
T  14741548 cgagtttacc 14741557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 28342719 - 28342832
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  28342719 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 28342818  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  28342819 aaattggaaggttt 28342832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 39784515 - 39784628
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||| |||| |||||||||  ||| ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  39784515 caatgttccgtaaatcgagtgttaaatcttcgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 39784614  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  39784615 aaattggaaggttt 39784628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 21067907 - 21067951
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  21067907 gtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 21067951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 252
Target Start/End: Complemental strand, 29614592 - 29614489
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  29614592 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 29614493  T
Q  249 aaat 252  Q
    ||||    
T  29614492 aaat 29614489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 157 - 251
Target Start/End: Original strand, 8675747 - 8675841
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaa 251  Q
    ||||||| |||||||||| ||  ||| ||||| | || || ||||||  ||||||||||||||||| ||  ||||||||||| ||| ||||||||    
T  8675747 cgcaaatcgagtgttaactctccgagattaccgagttaacgtttttaggtaccaaaatcgtgttaactctaaggtaaactcggtttctggtaaaa 8675841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 27148849 - 27148922
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| ||||||  || |||||||||||||| |||||||||| ||| ||||  | ||||||||||| |||||||    
T  27148849 tttacgtttttaggtatcaaaatcgtgttaaatcggaggtaacctcaatttcagctaaaatcagaatgtttgac 27148922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 238
Target Start/End: Original strand, 33383082 - 33383171
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcg 238  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||||||||||||| ||| || ||| ||||||||    
T  33383082 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtggtaactctgagataaactcg 33383171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 8675859 - 8675903
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| ||||||||||||  |||| ||||||||||||||||||    
T  8675859 gtttgactgagttaacactcgataaactcgtgtaaactcgaccga 8675903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 14732374 - 14732318
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| ||||||||||||| | |||||||| ||||| ||| |||||||    
T  14732374 caaaaacgtgttaactcggaggtaaacttggtttttggtgaaatcggaaagtttgac 14732318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 21024087 - 21024143
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| ||| ||||||||||| |||||||| ||||| ||| |||||||    
T  21024087 caaaaacgtgttaactcgaaggtaaactcggtttttggtgaaatcggaaagtttgac 21024143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 290 - 326
Target Start/End: Original strand, 23017093 - 23017129
Alignment:
Q  290 gtaaactcgaccgagtttaccatgttttacgagttta 326  Q
    |||||||||||||||||||| | ||||||||||||||    
T  23017093 gtaaactcgaccgagtttacaaagttttacgagttta 23017129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 35313561 - 35313633
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttga 264  Q
    ||||| |||||| ||  ||||| |||||||| ||||||||||| ||| |||||||| ||||| ||| ||||||    
T  35313561 tttacgtttttagatggcaaaaccgtgttaactcggaggtaaattcggtttttggtgaaatcggaaagtttga 35313633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 303
Target Start/End: Original strand, 39028614 - 39028657
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||    
T  39028614 gtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 39028657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 81; Significance: 7e-38; HSPs: 42)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 81; E-Value: 7e-38
Query Start/End: Original strand, 407 - 519
Target Start/End: Original strand, 16155406 - 16155518
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    ||||| || ||||||||||||||||||||||||||||||||| || ||||||||||||| ||||||||||||||||| |||||||||||||| |||||||    
T  16155406 tgaaatgtttctttttctttcttctctgagttctcaaaccatcaacaggggagcacataccagttagggttgcaattccgacagtggaaatttagatttc 16155505  T
Q  507 gacgccggtgatt 519  Q
    ||| |||||||||    
T  16155506 gacaccggtgatt 16155518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 407 - 541
Target Start/End: Original strand, 43173160 - 43173294
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| |||||||||||||||||| |||| |||||||||||||||||||||||||| ||||||| ||||| ||| ||||  | |||| ||| |||||    
T  43173160 tgaaacgtttctttttctttcttctctaagttttcaaaccatgaataggggagcacataccagttagagttgcgattccgacgatagaaactcatatttc 43173259  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcgg 541  Q
    ||||| |||||||| || | |||||||||||||||    
T  43173260 gacgctggtgattgcgatgccggttagggttgcgg 43173294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 416 - 543
Target Start/End: Complemental strand, 4962543 - 4962417
Alignment:
Q  416 tctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggt 515  Q
    |||||||||| ||||||||||||||||||||||||| ||||||||||||||||||||||| ||| |||  ||| |||||||||||  |||||||  || |    
T  4962543 tctttttctt-cttctctgagttctcaaaccatgaacaggggagcacatatcagttagggctgcgattcagacggtggaaattcatgtttcgacatcgat 4962445  T
Q  516 gattgtgacgtcggttagggttgcggtg 543  Q
    ||||| ||||| ||||||||||||||||    
T  4962444 gattgcgacgttggttagggttgcggtg 4962417  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 158 - 307
Target Start/End: Original strand, 33693226 - 33693384
Alignment:
Q  158 gcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaa 257  Q
    |||||| || ||||||| ||  ||||||||| | ||||   ||||| |||||||||||||||||| | ||||||||||||||||| ||||||||||||||    
T  33693226 gcaaatcgaatgttaactctccgagtttaccgagtttatgattttacataccaaaatcgtgttaacttggaggtaaactcgatttctggtaaaatcagaa 33693325  T
Q  258 g---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttt 307  Q
    |         |||||||||||||||||||| ||||| ||||||||||||||||||||||    
T  33693326 ggtttgacgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagttt 33693384  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 411 - 525
Target Start/End: Original strand, 33693527 - 33693641
Alignment:
Q  411 acgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacg 510  Q
    |||| |||||||||||||||||||| ||||||||||||||| |||| |||||||| |||||| ||||| ||||||||| | | ||||||||||||| | |    
T  33693527 acgtttctttttctttcttctctgaattctcaaaccatgaacagggaagcacataccagttatggttgtaatttcgacggggaaaattcagatttcaatg 33693626  T
Q  511 ccggtgattgtgacg 525  Q
    || ||||||| ||||    
T  33693627 cctgtgattgcgacg 33693641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 154 - 305
Target Start/End: Complemental strand, 7437706 - 7437546
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||| ||  ||||||||  | ||||| | ||||  |||||||||||||||||  ||||| |||||||| ||||||||||||||    
T  7437706 ttccgcaaatcgagtgttaactctccgagtttactgagtttacttgtttaggtaccaaaatcgtgttaacacggagataaactcggtttttggtaaaatc 7437607  T
Q  254 agaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagt 305  Q
     ||||         |||||||||||||||||||| ||||| ||||||||||||||||||||    
T  7437606 ggaaggtatggtgagtttgaccgagttaacactcggtaaactcgtgtaaactcgaccgagt 7437546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 543
Target Start/End: Original strand, 49458628 - 49458759
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||| | |||||||||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||     |||| ||||||||||| || ||    
T  49458628 tgaaacatttctttttctttcctctctgagttctcaaaccatgaaaatggaagcacataccagttagggttgc-----cgacggtggaaattcatatatc 49458722  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    |||| ||||||||| | || |||||||||||| ||||    
T  49458723 gacgtcggtgattgcgtcgccggttagggttgtggtg 49458759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 48379558 - 48379721
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| |||||||||||||||| |||||||||||||||| |||||    
T  48379558 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaattctgaggtaaactcgatttctggta 48379657  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         ||||||| |||||||||||| ||||| ||||||||||| ||||||    
T  48379658 aaatcggaaggcttaacgagtttgactgagttaacactcggtaaactcgtgtaaacttgaccga 48379721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 190 - 307
Target Start/End: Original strand, 16155166 - 16155292
Alignment:
Q  190 aatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcag 280  Q
    ||||||| ||||||  ||||||||||||||||| || |||||||||||| |||||| ||||||  ||||||||         ||||||||||||||||||    
T  16155166 aatttacgtttttaggtaccaaaatcgtgttaactctgaggtaaactcggtttttgataaaattggaaggtttgacgagtttgaccgagttaacactcag 16155265  T
Q  281 taaattcgtgtaaactcgaccgagttt 307  Q
    |||| ||||||||||||||||||||||    
T  16155266 taaactcgtgtaaactcgaccgagttt 16155292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 6e-20
Query Start/End: Original strand, 149 - 326
Target Start/End: Complemental strand, 4962871 - 4962685
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||||||| |||||| || | |||||| | | ||||| ||||||  || |||||||||||||| | |||||||||||||||||   |||    
T  4962871 caatgttccgcaaattgagcgttaactctctaagtttatcgagtttacgtttttaggtatcaaaatcgtgttaacttggaggtaaactcgatttcaagta 4962772  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttaccatgttttacgagttta 326  Q
    |||||  |||         |||||||||||||||||||| ||||| || |||||||||||||||||||| |  |||||| |||||||    
T  4962771 aaatcgaaaggtttgacgagtttgaccgagttaacactcggtaaactcatgtaaactcgaccgagtttatcgagttttatgagttta 4962685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 52617764 - 52617651
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| || |||| ||| | ||||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| |||||    
T  52617764 caatgttccgcaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 52617665  T
Q  249 aaatcagaaggttt 262  Q
    ||||| ||||||||    
T  52617664 aaatcggaaggttt 52617651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 149 - 253
Target Start/End: Original strand, 7665552 - 7665656
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||| ||||| |||||||||| |   || |||||| | ||||| ||||||  ||||||||||||||||| |||||||||||||||||||||||||    
T  7665552 caatgttccacaaatcgagtgttaactcgccgaatttacctagtttacgtttttagctaccaaaatcgtgttaactcggaggtaaactcgatttttggta 7665651  T
Q  249 aaatc 253  Q
    |||||    
T  7665652 aaatc 7665656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 303
Target Start/End: Complemental strand, 44905647 - 44905484
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||| || |||  ||| |||||||||||||||| ||||||| |||| ||| |||||    
T  44905647 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgttcttaggtacaaaaatcgtgttaattctgaggtaatctcggtttctggta 44905548  T
Q  249 aaatcagaagg---------tttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    |||||||||||         |||||| |||||||||||| ||||| |||| |||||||||||||    
T  44905547 aaatcagaaggcttaacgaatttgactgagttaacactcggtaaactcgtataaactcgaccga 44905484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 54629259 - 54629422
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||||||||||||||||| || |||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||||||||||| || ||    
T  54629259 caatgttccgcaaattgagtgttaactctctgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcgatttctgata 54629358  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||| |  |||         ||||||   ||||||||||||||||| ||||||||||||||||||    
T  54629359 aaagcgaaaggtttaacgagtttgattcagttaacactcagtaaactcgtgtaaactcgaccga 54629422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 154 - 303
Target Start/End: Original strand, 20833310 - 20833468
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||| || |||| ||| | | ||||| ||||||  ||| ||||||||||||| || |||||||||||  ||| ||||||||||    
T  20833310 ttccgcaaatcgagtgttaactctctgagattatcgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcagtttctggtaaaatc 20833409  T
Q  254 agaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
     ||||         ||||||| |||||||||||| ||||| ||||||||||||||||||    
T  20833410 ggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgaccga 20833468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 416 - 477
Target Start/End: Original strand, 7667175 - 7667236
Alignment:
Q  416 tctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggtt 477  Q
    |||||||||||||||||| ||||||||||||||||| ||| ||||||||| |||||||||||    
T  7667175 tctttttctttcttctcttagttctcaaaccatgaacaggagagcacataccagttagggtt 7667236  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 8598681 - 8598806
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| ||| ||||         |||||||||||||||||||||| ||||||||| |||      
T  8598681 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggg 8598780  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||| ||||||||    
T  8598781 cgagtttaccgttttttgcgagttta 8598806  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 51737479 - 51737366
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| || |||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||||||| ||| | |||    
T  51737479 caatgttccgcaaatcgagtgttaactctctgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagta 51737380  T
Q  249 aaatcagaaggttt 262  Q
    ||||| ||||||||    
T  51737379 aaatcggaaggttt 51737366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 253
Target Start/End: Complemental strand, 21386624 - 21386520
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||| ||||| |||||||||| ||  ||||||||| | ||||||||||||  || |||||||||||||| |  |||||||||||||||| |||||    
T  21386624 caatgttccccaaatcgagtgttaactctccgagtttaccgagtttacatttttaggtatcaaaatcgtgttaacttagaggtaaactcgatttctggta 21386525  T
Q  249 aaatc 253  Q
    |||||    
T  21386524 aaatc 21386520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 154 - 264
Target Start/End: Original strand, 43172893 - 43173003
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| || ||||||| |||| |||||| | | ||||  | ||||  ||||||||||||||| | ||||||||||||||||||| ||||||||||    
T  43172893 ttccgcaaatcgaatgttaactctttaagtttatcgagtttatgtgtttaggtaccaaaatcgtgttgactcggaggtaaactcgatttctggtaaaatc 43172992  T
Q  254 agaaggtttga 264  Q
      |||||||||    
T  43172993 gaaaggtttga 43173003  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 407 - 543
Target Start/End: Complemental strand, 7437380 - 7437255
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| |||||||||||||||||| |||||||||| |||||| ||||||||||||  |||||| ||||          | |||||||||||||||||    
T  7437380 tgaaacgtttctttttctttcttctct-agttctcaaatcatgaacaggggagcacatgccagttaaggtt----------cggtggaaattcagatttc 7437292  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    |||| | ||||||| ||||  |||||| |||||||||    
T  7437291 gacgtcagtgattgcgacgctggttagagttgcggtg 7437255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 23753173 - 23753068
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga 256  Q
    ||||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| ||||||||||||| || |||||||| ||| |||||||||||||  ||    
T  23753173 cgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttttggtaaaattgga 23753074  T
Q  257 aggttt 262  Q
    ||||||    
T  23753073 aggttt 23753068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 39038498 - 39038611
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||| ||||| |||||||||| || |||| ||| | ||||||| ||||||  ||| ||||| ||||||| || |||||||||||| ||| |||||    
T  39038498 caatgttccacaaatcgagtgttaactctctgagattatcgaatttacgtttttaggtacaaaaatggtgttaactctgaggtaaactcggtttctggta 39038597  T
Q  249 aaatcagaaggttt 262  Q
    ||||| ||||||||    
T  39038598 aaatcggaaggttt 39038611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 209 - 307
Target Start/End: Original strand, 49458379 - 49458486
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac---------cgagttaacactcagtaaattcgtgtaaactcga 299  Q
    |||||| ||||||| || || ||||||||||||| |||||||||| |||||||||||         | | ||||||||||||||| ||||||||||||||    
T  49458379 caaaattgtgttaactctgaagtaaactcgatttctggtaaaatcggaaggtttgacgagtttgaccaaattaacactcagtaaactcgtgtaaactcga 49458478  T
Q  300 ccgagttt 307  Q
    ||||||||    
T  49458479 ccgagttt 49458486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 149 - 303
Target Start/End: Original strand, 52810766 - 52810929
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||| ||||||| || ||||||||||||  || |||||    
T  52810766 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaattgtgttaactctgaggtaaactcgggttctggta 52810865  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||| ||||         ||||||| |||||||||||| ||||| | ||||||||||||||||    
T  52810866 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaacttgtgtaaactcgaccga 52810929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 301
Target Start/End: Original strand, 26107737 - 26107898
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| ||||| |||| ||  ||| ||| | | ||||| ||||||  ||| |||||| |||||| || |||||||||||||||| |||||    
T  26107737 caatgttccgcaaatcgagtgataactctccgagattaacgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcgatttctggta 26107836  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgacc 301  Q
     |||| ||||         ||||||| |||||||||||| ||||| ||||||||||||||||    
T  26107837 caatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcgacc 26107898  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 9818644 - 9818588
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||| ||| |||||||    
T  9818644 caaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 9818588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 407 - 543
Target Start/End: Complemental strand, 21386331 - 21386195
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    ||||| || ||||||||||| || |||||||||| ||| ||| || | | ||||||||| ||||||||||| | ||| |||| | |||||||| |||| |    
T  21386331 tgaaatgtttctttttcttttttatctgagttcttaaaacataaacatgagagcacataccagttagggttacgattccgacgggggaaattccgattgc 21386232  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtg 543  Q
    |||| ||||| |   || || ||||||||||||||||    
T  21386231 gacgtcggtgttaaggatgttggttagggttgcggtg 21386195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 264
Target Start/End: Original strand, 25049875 - 25049947
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttga 264  Q
    ||||| ||||||  |||||||||||||| || ||||||||||||||||||| | |||||||| ||| ||||||    
T  25049875 tttacgtttttaggtaccaaaatcgtgtcaactcggaggtaaactcgatttctagtaaaatcggaatgtttga 25049947  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 210 - 310
Target Start/End: Original strand, 49296138 - 49296247
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc-agaag--------gtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| | |||        |||||||||||||||||||||||||| |||||| || |||      
T  49296138 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcgaaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcggg 49296237  T
Q  301 cgagtttacc 310  Q
    ||||||||||    
T  49296238 cgagtttacc 49296247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 192 - 303
Target Start/End: Complemental strand, 50903058 - 50902938
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcagta 282  Q
    ||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| |||||||||  ||||||||         ||| |||||||||||| |||    
T  50903058 tttacgtttttatgtacaaaaatcgtgttaactctgaggtaaactcggtttctggtaaaattggaaggtttaacgagtttgactgagttaacactcggta 50902959  T
Q  283 aattcgtgtaaactcgaccga 303  Q
    || ||||||||||||||||||    
T  50902958 aactcgtgtaaactcgaccga 50902938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 208 - 310
Target Start/End: Complemental strand, 22489565 - 22489454
Alignment:
Q  208 ccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcagtaaattcgtgtaaactcg 298  Q
    |||||| |||||||| || || ||||||||||||| |||||||||| ||||||||         |||||||||||||||||||||| |||| | || |||    
T  22489565 ccaaaaacgtgttaaatcagatgtaaactcgatttctggtaaaatcggaaggtttaacgagtttgaccgagttaacactcagtaaactcgtatgaagtcg 22489466  T
Q  299 accgagtttacc 310  Q
    | ||||||||||    
T  22489465 agcgagtttacc 22489454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 37455255 - 37455368
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| |  |||| ||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  37455255 caatgttccgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 37455354  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  37455355 aaattggaaggttt 37455368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 154 - 262
Target Start/End: Original strand, 17946641 - 17946749
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||  ||  ||| ||| | | ||||| ||||||  ||| |||||| |||||| || |||||||||||| ||| ||||||||||    
T  17946641 ttccgcaaatcgagtgttaattctccgagattatcgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggtaaaatc 17946740  T
Q  254 agaaggttt 262  Q
     ||||||||    
T  17946741 ggaaggttt 17946749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 149 - 252
Target Start/End: Original strand, 18750051 - 18750154
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| || |||  ||||  | ||||| ||||||  ||| |||||| |||||| || |||||||||||| ||| |||||    
T  18750051 caatgttccgcaaatcgagtgttaactctctgatattactgagtttacgtttttaggtacaaaaatcatgttaactctgaggtaaactcggtttctggta 18750150  T
Q  249 aaat 252  Q
    ||||    
T  18750151 aaat 18750154  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 195 - 262
Target Start/End: Complemental strand, 36673898 - 36673831
Alignment:
Q  195 acatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    |||||||||| ||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||||||||    
T  36673898 acatttttaagtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggttt 36673831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000005
Query Start/End: Original strand, 210 - 276
Target Start/End: Complemental strand, 2118516 - 2118450
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacac 276  Q
    |||| |||||||| ||| ||||||||||||||||| || |||||  ||  |||||||||||||||||    
T  2118516 aaaaacgtgttaactcgaaggtaaactcgattttttgtgaaatcgaaatatttgaccgagttaacac 2118450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 31646045 - 31645940
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga 256  Q
    ||||||| |||||||||| ||  ||| ||||| |  |||| ||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||    
T  31646045 cgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgga 31645946  T
Q  257 aggttt 262  Q
    ||||||    
T  31645945 aggttt 31645940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 40897539 - 40897652
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||||| || |||||||||| ||  ||| ||||| |||||||  |||||  ||| ||||||||||||| || |||||||| ||| ||| || ||    
T  40897539 caatgttccgcagatcgagtgttaactctccgagattaccgaatttacgattttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 40897638  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  40897639 aaattggaaggttt 40897652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Original strand, 49458544 - 49458585
Alignment:
Q  373 caaaacctaattcattttctacaaattcaaagactgaaacgt 414  Q
    ||||||| |||||||||||||||| | |||||||||||||||    
T  49458544 caaaaccaaattcattttctacaagtccaaagactgaaacgt 49458585  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 50761892 - 50761779
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||| |||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||| | ||||| ||||     
T  50761892 caatgttcagcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatagatttctggtg 50761793  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  50761792 aaattggaaggttt 50761779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 291
Target Start/End: Original strand, 53836042 - 53836074
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgt 291  Q
    |||||||||||||||||||||||||| ||||||    
T  53836042 gtttgaccgagttaacactcagtaaactcgtgt 53836074  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 78; Significance: 4e-36; HSPs: 29)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 78; E-Value: 4e-36
Query Start/End: Original strand, 418 - 539
Target Start/End: Original strand, 16438970 - 16439090
Alignment:
Q  418 tttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtga 517  Q
    ||||||||||||||| |||||||||||||||||| | ||||||||||| ||||||||||||| || | ||||||||||||| ||||||||||||||||||    
T  16438970 tttttctttcttctcggagttctcaaaccatgaacatgggagcacataccagttagggttgcgatct-gacagtggaaatttagatttcgacgccggtga 16439068  T
Q  518 ttgtgacgtcggttagggttgc 539  Q
    ||| ||||| ||||||||||||    
T  16439069 ttgcgacgttggttagggttgc 16439090  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 75; E-Value: 3e-34
Query Start/End: Original strand, 407 - 513
Target Start/End: Complemental strand, 31534926 - 31534820
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||| | |||||| ||||||||||||||||||||||||||||| | | ||||||||||||||||||||||| |||||||| |||||||||||||||||    
T  31534926 tgaaacctttcttttactttcttctctgagttctcaaaccatgaacaagagagcacatatcagttagggttgcgatttcgacggtggaaattcagatttc 31534827  T
Q  507 gacgccg 513  Q
    |||||||    
T  31534826 gacgccg 31534820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 65; E-Value: 3e-28
Query Start/End: Original strand, 407 - 519
Target Start/End: Complemental strand, 31975483 - 31975371
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| | |||||||||||||||| ||||||||||||||||| ||||||||||||| ||||||||||||| ||| |||  ||||||||||| ||||     
T  31975483 tgaaacgtttttttttctttcttctctaagttctcaaaccatgaacaggggagcacataccagttagggttgcgattccgaaggtggaaattcatatttt 31975384  T
Q  507 gacgccggtgatt 519  Q
    ||| |||||||||    
T  31975383 gacaccggtgatt 31975371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 543
Target Start/End: Original strand, 2607176 - 2607301
Alignment:
Q  418 tttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtga 517  Q
    |||||||||||||| ||||||||||||||||||| | | ||||||||| |||||||  |||| ||| |||| ||||||||||| ||||||||  ||||||    
T  2607176 tttttctttcttctatgagttctcaaaccatgaacatgagagcacataccagttagcattgcgattccgacggtggaaattcatatttcgacatcggtga 2607275  T
Q  518 ttgtgacgtcggttagggttgcggtg 543  Q
    ||| |||| |||||||||||| ||||    
T  2607276 ttgcgacgccggttagggttgtggtg 2607301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 543
Target Start/End: Complemental strand, 33641104 - 33640980
Alignment:
Q  418 tttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtga 517  Q
    ||||||||||||| ||||||| |||||||||||| | ||||||||||| |||||| |||||| ||| | || ||||||||||||||||||||| ||||||    
T  33641104 tttttctttcttccctgagttttcaaaccatgaacatgggagcacataccagttatggttgc-attccaacggtggaaattcagatttcgacgtcggtga 33641006  T
Q  518 ttgtgacgtcggttagggttgcggtg 543  Q
    ||| ||||   |||||||||||||||    
T  33641005 ttgcgacgcaagttagggttgcggtg 33640980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 326
Target Start/End: Complemental strand, 28900934 - 28900810
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgt 291  Q
    ||||||| ||||  ||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||| ||||||||||||||           ||    
T  28900934 tttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttggccgagttaacactc----------ggt 28900845  T
Q  292 aaactcgaccgagtttaccatgttttacgagttta 326  Q
    |||||||||||||||||||| ||||||||||||||    
T  28900844 aaactcgaccgagtttaccaagttttacgagttta 28900810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 59; E-Value: 1e-24
Query Start/End: Original strand, 149 - 326
Target Start/End: Original strand, 16438667 - 16438853
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||||||| | | ||||| ||||||  ||| ||||||||||||| | |||||||||||||| || |||||    
T  16438667 caatgttccgcaaatcgagtgttaactctccgagtttatcgagtttacgtttttaggtacaaaaatcgtgttaacttggaggtaaactcgacttctggta 16438766  T
Q  249 aaatcagaaggtttgac---------cgagttaacactcagtaaattcgtgtaaactcgaccgagtttaccatgttttacgagttta 326  Q
    ||||| |||||||||||         ||||||| ||||| ||||| |||||||||||||| |||||||| |  ||||||||||||||    
T  16438767 aaatcggaaggtttgacgagtttaatcgagttagcactcggtaaactcgtgtaaactcgatcgagtttagcgagttttacgagttta 16438853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 424 - 538
Target Start/End: Complemental strand, 28900661 - 28900543
Alignment:
Q  424 tttcttctctgagttctcaaaccatgaataggggagcacatat----cagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgatt 519  Q
    |||||||||||||||||||||||||||| ||||||||||||||    ||||||||||||  |||||||| ||||||||||| ||||| |||||| | |||    
T  28900661 tttcttctctgagttctcaaaccatgaacaggggagcacatatataccagttagggttgtgatttcgacggtggaaattcatatttcaacgccgtttatt 28900562  T
Q  520 gtgacgtcggttagggttg 538  Q
    | |||  ||||||||||||    
T  28900561 gcgacaccggttagggttg 28900543  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 149 - 307
Target Start/End: Original strand, 2606856 - 2607023
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| || ||||||| ||||||||||||  | ||||| | ||||   ||||||||||| |||| || |||||||||||||||| |||||    
T  2606856 caatgttccgcaaatcgaatgttaactctttgagtttactgagtttacgtgtttaggcaccaaaatcgttttaactctgaggtaaactcgatttctggta 2606955  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttt 307  Q
    ||||||||||         ||||||||||||||||||||| |||| || | |||||||||||||||||    
T  2606956 aaatcagaaggtttgatgagtttgaccgagttaacactcaataaactcttataaactcgaccgagttt 2607023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 53; E-Value: 4e-21
Query Start/End: Original strand, 209 - 309
Target Start/End: Complemental strand, 33641367 - 33641267
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttta 308  Q
    |||||||||||||| || || |||||||| |||  ||||||||||| |||||||||||||||||||||||  |||| ||||| |||||| ||||||||||    
T  33641367 caaaatcgtgttaactctgatgtaaactcaattaatggtaaaatcataaggtttgaccgagttaacactcgataaactcgtgcaaactctaccgagttta 33641268  T
Q  309 c 309  Q
    |    
T  33641267 c 33641267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 210 - 326
Target Start/End: Complemental strand, 1463749 - 1463624
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac---------cgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| ||| |||||||         ||||||||||||||||||| ||||||||| |||      
T  1463749 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggg 1463650  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||| ||||||||    
T  1463649 cgagtttaccgttttttgcgagttta 1463624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 6788122 - 6788247
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt---------gaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| ||| ||||         |||||||||||||||||||||| ||||||||| |||      
T  6788122 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtaaaatcggg 6788221  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||| ||||||||    
T  6788222 cgagtttaccgttttttgcgagttta 6788247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 209 - 276
Target Start/End: Complemental strand, 7835443 - 7835376
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacac 276  Q
    ||||| |||||||| ||||||||||||||| |||||||| ||||| ||| ||||||||||||||||||    
T  7835443 caaaaacgtgttaagtcggaggtaaactcggtttttggtgaaatcggaaagtttgaccgagttaacac 7835376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 44; E-Value: 9e-16
Query Start/End: Original strand, 420 - 519
Target Start/End: Original strand, 24194742 - 24194841
Alignment:
Q  420 tttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgatt 519  Q
    |||| ||||||| | ||||||||||||||||| | ||||||| ||| ||||||||||||| | | |||| ||||||||||| |||| |||| ||||||||    
T  24194742 tttccttcttctataagttctcaaaccatgaacatgggagcatataccagttagggttgcgactccgacggtggaaattcatattttgacgtcggtgatt 24194841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 192 - 265
Target Start/End: Original strand, 13461377 - 13461450
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| ||||||  || ||||||||||| || ||||||||||||||| |||||||||||||||||| |||||||    
T  13461377 tttacgtttttatgtatcaaaatcgtgtcaactcggaggtaaactcggtttttggtaaaatcagaatgtttgac 13461450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 31975734 - 31975675
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||||||||||||| || |||||||||||||||| | |||||||| |||||||||||    
T  31975734 taccaaaatcgtgttaactctgaggtaaactcgatttcttgtaaaatcggaaggtttgac 31975675  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 7497507 - 7497620
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| || ||||||| ||  ||| ||| ||| ||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| |||||    
T  7497507 caatgttccgcaaatcgaatgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctggta 7497606  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  7497607 aaattggaaggttt 7497620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 14262228 - 14262115
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||| | | ||||| ||||||  ||| ||||||||||||| || |||||||| ||||||| |||||    
T  14262228 caatgttccgcaaatcgagtgttaactctccgagattatctagtttacttttttaggtacaaaaatcgtgttaactctgaggtaaaatcgatttctggta 14262129  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  14262128 aaattggaaggttt 14262115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 31996327 - 31996271
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| |||||||||||||||||||||||| ||||| ||| |||||||    
T  31996327 caaaaacgtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 31996271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 210 - 265
Target Start/End: Complemental strand, 10113858 - 10113803
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    |||| |||||||| ||||||||||||||| |||||||||||||| ||| |||||||    
T  10113858 aaaaacgtgttaactcggaggtaaactcgttttttggtaaaatcggaaagtttgac 10113803  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 4200243 - 4200130
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||| ||| |||||| |||||| || |||||||| ||| ||| |||||    
T  4200243 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaagtacaaaaatcatgttaactctgaggtaaaatcggtttctggta 4200144  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  4200143 aaattggaaggttt 4200130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 261 - 326
Target Start/End: Original strand, 24194496 - 24194561
Alignment:
Q  261 ttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttaccatgttttacgagttta 326  Q
    |||||||||||||||||| ||||| ||||||||| || | ||||||||||  | ||||||||||||    
T  24194496 ttgaccgagttaacactcggtaaactcgtgtaaattcaatcgagtttaccgagctttacgagttta 24194561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 31067841 - 31067954
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||  ||  ||| ||| | | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  31067841 caatgttccgcaaatcgagtgttaaatctccgagattatcgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 31067940  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  31067941 aaattggaaggttt 31067954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 192 - 265
Target Start/End: Complemental strand, 31535156 - 31535083
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||||||||  || |||||| ||||||| || |||| ||||||||||| ||||||||||  ||||||||||    
T  31535156 tttacatttttaggtatcaaaattgtgttaactctgaggcaaactcgatttctggtaaaatcgaaaggtttgac 31535083  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 206 - 309
Target Start/End: Original strand, 3000258 - 3000370
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac---------cgagttaacactcagtaaattcgtgtaaact 296  Q
    ||||||||||||||||| |||| |||||| ||||||| |||||||||| | | |||||||         |||||||||||||| |||| ||||||||| |    
T  3000258 taccaaaatcgtgttaactcgggggtaaattcgatttatggtaaaatcgggaagtttgacgagtttgatcgagttaacactcaataaactcgtgtaaaat 3000357  T
Q  297 cgaccgagtttac 309  Q
    || | ||||||||    
T  3000358 cggctgagtttac 3000370  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 209 - 265
Target Start/End: Complemental strand, 8779660 - 8779604
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| ||||||||||||||| |||||||| ||||| ||| |||||||    
T  8779660 caaaaacgtgttaactcggaggtaaactcggtttttggtgaaatcggaaagtttgac 8779604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 34758871 - 34758758
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| ||| |||||| ||  ||| ||| ||| ||||| ||||||  ||| ||||||||||||| || |||||||| ||| ||| || ||    
T  34758871 caatgttccgcaaatcgagcgttaactctccgagattatcaagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctgata 34758772  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  34758771 aaattggaaggttt 34758758  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 21199575 - 21199631
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| ||  |||||||||||||||||||| ||||| ||| |||||||    
T  21199575 caaaaccgtgttaactccaaggtaaactcgatttttggtgaaatcggaaagtttgac 21199631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 194 - 262
Target Start/End: Original strand, 31896091 - 31896159
Alignment:
Q  194 tacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    ||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||||||||    
T  31896091 tacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggttt 31896159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 71; Significance: 7e-32; HSPs: 44)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 418 - 540
Target Start/End: Complemental strand, 27878443 - 27878321
Alignment:
Q  418 tttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtga 517  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||||| || | |||||||  ||| ||| |||||||||| ||||||||||||||||||    
T  27878443 tttttctttcttctctgagttctgaaaccatgaacatgggagcacataccaatcagggttgtcattccgaaagtggaaatttagatttcgacgccggtga 27878344  T
Q  518 ttgtgacgtcggttagggttgcg 540  Q
    |||| | ||||||||||||||||    
T  27878343 ttgttatgtcggttagggttgcg 27878321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 71; E-Value: 7e-32
Query Start/End: Original strand, 418 - 540
Target Start/End: Complemental strand, 28018624 - 28018502
Alignment:
Q  418 tttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtga 517  Q
    ||||||||||||||||||||||| |||||||||| | ||||||||||| || | |||||||  ||| ||| |||||||||| ||||||||||||||||||    
T  28018624 tttttctttcttctctgagttctgaaaccatgaacatgggagcacataccaatcagggttgtcattccgaaagtggaaatttagatttcgacgccggtga 28018525  T
Q  518 ttgtgacgtcggttagggttgcg 540  Q
    |||| | ||||||||||||||||    
T  28018524 ttgttatgtcggttagggttgcg 28018502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 67; E-Value: 2e-29
Query Start/End: Original strand, 417 - 543
Target Start/End: Original strand, 42423473 - 42423598
Alignment:
Q  417 ctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtg 516  Q
    |||||||||||||| ||||||| |||||||||||| | | ||||||||| |||||| ||||||| || | || |||||||||||||||||||||||||||    
T  42423473 ctttttctttcttccctgagttttcaaaccatgaacatgagagcacataccagttatggttgca-ttccaacggtggaaattcagatttcgacgccggtg 42423571  T
Q  517 attgtgacgtcggttagggttgcggtg 543  Q
    |||| |||| | |||||||||||||||    
T  42423572 attgcgacgccagttagggttgcggtg 42423598  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 63; E-Value: 4e-27
Query Start/End: Original strand, 419 - 541
Target Start/End: Complemental strand, 12522236 - 12522114
Alignment:
Q  419 ttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgat 518  Q
    ||||||||||||||| ||||||||||| ||||| ||||||||||||| ||||||||||||| ||| || | ||||||||||||||| |||||||| ||||    
T  12522236 ttttctttcttctctaagttctcaaacgatgaacaggggagcacataccagttagggttgcgattccggcggtggaaattcagattgcgacgccgatgat 12522137  T
Q  519 tgtgacgtcggttagggttgcgg 541  Q
    || |  |||| || |||||||||    
T  12522136 tgcgttgtcgatttgggttgcgg 12522114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 418 - 543
Target Start/End: Complemental strand, 6387930 - 6387805
Alignment:
Q  418 tttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtga 517  Q
    ||||| |||||| ||||||||||||||||||||| | | |||||||||| |||||||||||| |||||||  | |||||||| |||| | ||||||||||    
T  6387930 tttttttttcttatctgagttctcaaaccatgaacatgagagcacatattagttagggttgcgatttcgatgggggaaattccgattgcaacgccggtga 6387831  T
Q  518 ttgtgacgtcggttagggttgcggtg 543  Q
    ||| || || ||||||||||||||||    
T  6387830 ttgcgatgttggttagggttgcggtg 6387805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 149 - 309
Target Start/End: Complemental strand, 8029980 - 8029811
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||| |||| |||||||||| ||| ||||||| | | ||||| | ||||  ||||||||||||||||| || ||| |||||||||||| |||||    
T  8029980 caatgttccgtaaatcgagtgttaactcttcgagtttatcgagtttacgtgtttaggtaccaaaatcgtgttaactctgagataaactcgatttctggta 8029881  T
Q  249 aaatcagaaggtt---------tgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttac 309  Q
    ||||| |||||||         ||||||||||||||||| ||||| ||||||||||||||||||||||||    
T  8029880 aaatcggaaggtttgacgagtttgaccgagttaacactcggtaaaatcgtgtaaactcgaccgagtttac 8029811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 62; E-Value: 2e-26
Query Start/End: Original strand, 407 - 512
Target Start/End: Original strand, 41394198 - 41394302
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    ||||| || |||||||||||||||||| |||||||||| |||||| ||||||||||||| ||||||||||||| ||| ||||| | ||||||||||||||    
T  41394198 tgaaaggtttctttttctttcttctctaagttctcaaatcatgaacaggggagcacataccagttagggttgcgattccgacaat-gaaattcagatttc 41394296  T
Q  507 gacgcc 512  Q
    ||||||    
T  41394297 gacgcc 41394302  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 421 - 540
Target Start/End: Complemental strand, 27915384 - 27915265
Alignment:
Q  421 ttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgattg 520  Q
    |||||||||||||||||||| |||||||||| | ||||||||||| || | |||||||  ||| ||| || | ||||| |||||||||||||||||||||    
T  27915384 ttctttcttctctgagttctgaaaccatgaacatgggagcacataccaatcagggttgtgattccgaaagcgaaaatttagatttcgacgccggtgattg 27915285  T
Q  521 tgacgtcggttagggttgcg 540  Q
    | | ||||||||||||||||    
T  27915284 ttatgtcggttagggttgcg 27915265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 421 - 540
Target Start/End: Complemental strand, 27961803 - 27961684
Alignment:
Q  421 ttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgattg 520  Q
    |||||||||||||||||||| |||||||||| | ||||||||||| || | |||||||  ||| ||| || | ||||| |||||||||||||||||||||    
T  27961803 ttctttcttctctgagttctgaaaccatgaacatgggagcacataccaatcagggttgtgattccgaaagcgaaaatttagatttcgacgccggtgattg 27961704  T
Q  521 tgacgtcggttagggttgcg 540  Q
    | | ||||||||||||||||    
T  27961703 ttatgtcggttagggttgcg 27961684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 57; E-Value: 2e-23
Query Start/End: Original strand, 407 - 515
Target Start/End: Complemental strand, 8029679 - 8029571
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| |||||||||||||||||||| ||||||||| ||||| ||||||||||||| ||||||  ||||| ||| |||| || |||||||| |||||    
T  8029679 tgaaacgtttctttttctttcttctctgaattctcaaactatgaacaggggagcacataccagttaatgttgcgattccgacggtagaaattcatatttc 8029580  T
Q  507 gacgccggt 515  Q
     ||||||||    
T  8029579 cacgccggt 8029571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 56; E-Value: 6e-23
Query Start/End: Original strand, 154 - 265
Target Start/End: Complemental strand, 12522642 - 12522531
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||| ||  |||||||| || ||| ||||||||  ||||||||||||||||| || |||||||||||| ||| ||||||||||    
T  12522642 ttccgcaaatcgagtgttaactctccgagtttactaagtttgcatttttaggtaccaaaatcgtgttaactcagaggtaaactcggtttctggtaaaatc 12522543  T
Q  254 agaaggtttgac 265  Q
     |||||||||||    
T  12522542 ggaaggtttgac 12522531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 49; E-Value: 9e-19
Query Start/End: Original strand, 159 - 307
Target Start/End: Original strand, 24082183 - 24082331
Alignment:
Q  159 caaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaag 258  Q
    |||||||||||||||| |   |||||||| || ||||   |||||  ||||||||| |||||||| | |||||||| ||| ||| ||||||||||  |||    
T  24082183 caaattgagtgttaactcgacgagtttactaagtttatgattttaggtaccaaaattgtgttaatactgaggtaaattcggtttctggtaaaatcgaaag 24082282  T
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttt 307  Q
    |||||||| ||||||||||| ||||| |||| ||||||  |||||||||    
T  24082283 gtttgaccaagttaacactcggtaaactcgtataaactaaaccgagttt 24082331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 48; E-Value: 4e-18
Query Start/End: Original strand, 149 - 299
Target Start/End: Original strand, 31625718 - 31625877
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| ||||| ||||||| || |||||||||||| ||| |||||    
T  31625718 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaattgtgttaactctgaggtaaactcggtttctggta 31625817  T
Q  249 aaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcga 299  Q
    ||||| ||||         ||||||| |||||||||||| ||||| ||||||||||||||    
T  31625818 aaatcggaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaactcga 31625877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 46; E-Value: 6e-17
Query Start/End: Original strand, 416 - 509
Target Start/End: Original strand, 44976998 - 44977091
Alignment:
Q  416 tctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgac 509  Q
    ||||||||||||| || ||||||||||||||||||| ||||||||||||| | ||||| ||| | |||  ||| ||| ||||||||||||||||    
T  44976998 tctttttctttctactatgagttctcaaaccatgaacaggggagcacatacctgttagagttacgattctgacggtgaaaattcagatttcgac 44977091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 149 - 265
Target Start/End: Complemental strand, 6388265 - 6388149
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||||||||| |||| |   ||||||| | ||||||  ||||||  ||||||||||||||||| ||||||||||||||  ||| |||||    
T  6388265 caatgttccgcaaattgagtggtaactcgccgagtttatcgaatttatgtttttaggtaccaaaatcgtgttaactcggaggtaaactctgtttatggta 6388166  T
Q  249 aaatcagaaggtttgac 265  Q
    ||||| ||| |||||||    
T  6388165 aaatcggaaagtttgac 6388149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 192 - 264
Target Start/End: Complemental strand, 37131383 - 37131311
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttga 264  Q
    ||||||||||||  |||||||||||||| || |||||||||||||||| || |||||||||||||| ||||||    
T  37131383 tttacatttttaggtaccaaaatcgtgtcaactcggaggtaaactcgacttctggtaaaatcagaatgtttga 37131311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 9288285 - 9288172
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||| ||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  9288285 caatgttccgcaaatcgagtgttaactcttcgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 9288186  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  9288185 aaattggaaggttt 9288172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 210 - 326
Target Start/End: Original strand, 19484237 - 19484361
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaa---------ggtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    |||| |||||||| ||||||||||||||||||| |||||||||| |||          |||||||||||||||||||||||||| |||||| || |||      
T  19484237 aaaaacgtgttaactcggaggtaaactcgatttctggtaaaatcggaaagtttgacgagtttgaccgagttaacactcagtaaactcgtgtgaaatcggg 19484336  T
Q  301 cgagtttaccatgttttacgagttta 326  Q
    |||||||||| | |||||||||||||    
T  19484337 cgagtttaccgt-ttttacgagttta 19484361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 19717665 - 19717552
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||    
T  19717665 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggta 19717566  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  19717565 aaattggaaggttt 19717552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 157 - 262
Target Start/End: Original strand, 32497959 - 32498064
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga 256  Q
    |||||||||||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| | |||||||| ||    
T  32497959 cgcaaattgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctagtaaaatcgga 32498058  T
Q  257 aggttt 262  Q
    ||||||    
T  32498059 aggttt 32498064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 468 - 539
Target Start/End: Complemental strand, 12737865 - 12737794
Alignment:
Q  468 agttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgattgtgacgtcggttagggttgc 539  Q
    |||||||||||| ||| |||| ||| ||||||||||||||| |||| |||||| ||||| ||||||||||||    
T  12737865 agttagggttgcgattccgacggtgaaaattcagatttcgatgccgatgattgcgacgttggttagggttgc 12737794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 179 - 265
Target Start/End: Original strand, 17234705 - 17234791
Alignment:
Q  179 tgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    |||||||||||| ||| | ||||||  |||||||||| | | || ||||||||||||||||||| |||||||||| ||| |||||||    
T  17234705 tgagtttaccaagtttgcgtttttaggtaccaaaatcctatcaactcggaggtaaactcgatttctggtaaaatcggaatgtttgac 17234791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 39; E-Value: 0.0000000000008
Query Start/End: Original strand, 210 - 303
Target Start/End: Original strand, 26856576 - 26856678
Alignment:
Q  210 aaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgac 300  Q
    ||||||||||||| || |||||||||||| ||| |||||||||||||||         ||||||| |||||||||||| ||||| ||||||||| |||||    
T  26856576 aaaatcgtgttaactctgaggtaaactcggtttctggtaaaatcagaaggtttaacgagtttgactgagttaacactcggtaaactcgtgtaaattcgac 26856675  T
Q  301 cga 303  Q
    |||    
T  26856676 cga 26856678  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 10295130 - 10295017
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| ||||| |||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| | ||||||||||| || |||||||||||| ||| |||||    
T  10295130 caatgttccgtaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaacaatcgtgttaactctgaggtaaactcggtttctggta 10295031  T
Q  249 aaatcagaaggttt 262  Q
    ||||| ||||||||    
T  10295030 aaatcggaaggttt 10295017  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 16364116 - 16364229
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| || |||| ||| | ||||||| ||||||  ||| ||||||||||||| ||  ||||||| ||| ||| | |||    
T  16364116 caatgttccgcaaatcgagtgttaactctatgagattatcgaatttacgtttttaggtacaaaaatcgtgttaactctaaggtaaattcggtttctagta 16364215  T
Q  249 aaatcagaaggttt 262  Q
    ||||| ||||||||    
T  16364216 aaatcggaaggttt 16364229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 18958518 - 18958405
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| ||||||||||||| || |||||||| | | ||| |||||    
T  18958518 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaaattggtttctggta 18958419  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  18958418 aaattggaaggttt 18958405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 27974819 - 27974728
Alignment:
Q  419 ttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacg 510  Q
    ||||||||||||||| |||||| |||| ||||| | ||||||||||| || |||||||||  |||  ||| ||||||||| ||||| |||||    
T  27974819 ttttctttcttctctaagttctgaaactatgaacatgggagcacataccaattagggttgtgattctgacggtggaaatttagattccgacg 27974728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 419 - 510
Target Start/End: Complemental strand, 28032088 - 28031997
Alignment:
Q  419 ttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttcgacg 510  Q
    ||||||||||||||| |||||| |||| ||||| | ||||||||||| || |||||||||  |||  ||| ||||||||| ||||| |||||    
T  28032088 ttttctttcttctctaagttctgaaactatgaacatgggagcacataccaattagggttgtgattctgacggtggaaatttagattccgacg 28031997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 253
Target Start/End: Complemental strand, 1528006 - 1527940
Alignment:
Q  187 ccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||| ||||| ||||||| |  ||||| |||||||| |||||||||||||||||||||||| |||||    
T  1528006 ccaattttacgtttttaagtggcaaaaacgtgttaactcggaggtaaactcgatttttggtgaaatc 1527940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 187 - 265
Target Start/End: Original strand, 41393955 - 41394033
Alignment:
Q  187 ccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    |||| ||||| ||||||  || |||||||||||||||||||||||||||||  ||| || |||||||  ||||||||||    
T  41393955 ccaagtttacgtttttaggtatcaaaatcgtgttaattcggaggtaaactcagtttctgataaaatcgaaaggtttgac 41394033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 27915599 - 27915551
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttt 307  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||    
T  27915599 gtttgaccgagttaacactcgatgaactcgtgtaaactcgaccgagttt 27915551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 259 - 307
Target Start/End: Complemental strand, 27962018 - 27961970
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttt 307  Q
    ||||||||||||||||||||  | || ||||||||||||||||||||||    
T  27962018 gtttgaccgagttaacactcgatgaactcgtgtaaactcgaccgagttt 27961970  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 417 - 472
Target Start/End: Original strand, 24082472 - 24082527
Alignment:
Q  417 ctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagtta 472  Q
    ||||||||||||| ||| |||||||||| |||||| ||| ||||||||| ||||||    
T  24082472 ctttttctttcttatctaagttctcaaatcatgaacaggagagcacataacagtta 24082527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 27878717 - 27878658
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||||||||||||| ||||| ||||| ||| ||| |||||||||| | |||||||||    
T  27878717 taccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgac 27878658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 206 - 265
Target Start/End: Complemental strand, 28018898 - 28018839
Alignment:
Q  206 taccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||||||||||||| ||||| ||||| ||| ||| |||||||||| | |||||||||    
T  28018898 taccaaaatcgtgttaactcggatgtaaattcggtttctggtaaaatcggtaggtttgac 28018839  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 373 - 414
Target Start/End: Complemental strand, 12522332 - 12522291
Alignment:
Q  373 caaaacctaattcattttctacaaattcaaagactgaaacgt 414  Q
    ||||||| |||||||||||||||||  |||||||||||||||    
T  12522332 caaaacccaattcattttctacaaacccaaagactgaaacgt 12522291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 157 - 262
Target Start/End: Complemental strand, 18305759 - 18305654
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga 256  Q
    ||||||| |||||||||| ||  ||| ||||| |  |||| ||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||    
T  18305759 cgcaaatcgagtgttaactctccgagattaccgagcttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattgga 18305660  T
Q  257 aggttt 262  Q
    ||||||    
T  18305659 aggttt 18305654  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 192 - 253
Target Start/End: Original strand, 24067110 - 24067171
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    ||||| ||||||  |||||||||||||| || |||||||| ||||| |||| ||||||||||    
T  24067110 tttacgtttttaggtaccaaaatcgtgtcaactcggaggtgaactcaatttctggtaaaatc 24067171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Complemental strand, 42305395 - 42305282
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||| ||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||  ||||||||||||| || |||||||| ||| ||| |||||    
T  42305395 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacctttttaggtataaaaatcgtgttaactctgaggtaaaatcggtttctggta 42305296  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  42305295 aaattggaaggttt 42305282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 193 - 262
Target Start/End: Complemental strand, 44725538 - 44725469
Alignment:
Q  193 ttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggttt 262  Q
    |||||||||||  ||| ||||||||||||| || |||||||| ||| ||| |||||||||  ||||||||    
T  44725538 ttacatttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttctggtaaaattggaaggttt 44725469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 303
Target Start/End: Complemental strand, 14781804 - 14781761
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||| |||||||||||||||||| |||||| |||||||||||    
T  14781804 gtttgactgagttaacactcagtaaactcgtgt-aactcgaccga 14781761  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 209 - 265
Target Start/End: Original strand, 41252185 - 41252241
Alignment:
Q  209 caaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||| |||||||| ||||| |||||||||||||||| | ||||| ||| |||||||    
T  41252185 caaaaacgtgttaactcggaagtaaactcgatttttgatgaaatcggaaagtttgac 41252241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 259 - 307
Target Start/End: Original strand, 42423270 - 42423318
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagttt 307  Q
    |||||||||||||||||||  ||||| || ||||||||| |||||||||    
T  42423270 gtttgaccgagttaacactgggtaaactcctgtaaactctaccgagttt 42423318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 29; E-Value: 0.0000008
Query Start/End: Original strand, 154 - 262
Target Start/End: Complemental strand, 43308294 - 43308186
Alignment:
Q  154 ttccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatc 253  Q
    |||||||||| |||||||||| ||| ||| ||| | | ||| | ||||||  ||||||||||||||||| || ||  |||| ||| ||| |||||||||     
T  43308294 ttccgcaaatcgagtgttaactcttcgagattatcgagtttgcgtttttaggtaccaaaatcgtgttaactctgatataaaatcggtttctggtaaaatt 43308195  T
Q  254 agaaggttt 262  Q
     ||||||||    
T  43308194 ggaaggttt 43308186  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013 (Bit Score: 68; Significance: 4e-30; HSPs: 2)
Name: scaffold0013
Description:

Target: scaffold0013; HSP #1
Raw Score: 68; E-Value: 4e-30
Query Start/End: Original strand, 407 - 546
Target Start/End: Original strand, 89541 - 89680
Alignment:
Q  407 tgaaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacatatcagttagggttgcaatttcgacagtggaaattcagatttc 506  Q
    |||||||| |||||||||||||||||||||||||||||||||||| | || |||| ||| ||||||||||||| ||| |||| ||||||||||| |||||    
T  89541 tgaaacgtttctttttctttcttctctgagttctcaaaccatgaacatggaagcatataacagttagggttgcgattccgacggtggaaattcatatttc 89640  T
Q  507 gacgccggtgattgtgacgtcggttagggttgcggtgatg 546  Q
    | ||  || ||||  |||| ||||||||||||| ||||||    
T  89641 gccgtaggcgattacgacgccggttagggttgcagtgatg 89680  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0013; HSP #2
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 147 - 265
Target Start/End: Original strand, 89239 - 89357
Alignment:
Q  147 accaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttgg 246  Q
    |||||| ||||| |||| |||||||||| || |||||||| | | ||||  ||||||  |||||| |||||||||| | | ||||||||||||||| |||    
T  89239 accaatgttccgtaaatcgagtgttaactctgtgagtttatcgagtttaagtttttaggtaccaatatcgtgttaacttgaaggtaaactcgatttctgg 89338  T
Q  247 taaaatcagaaggtttgac 265  Q
    ||||||  |||||||||||    
T  89339 taaaattggaaggtttgac 89357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1128 (Bit Score: 61; Significance: 6e-26; HSPs: 1)
Name: scaffold1128
Description:

Target: scaffold1128; HSP #1
Raw Score: 61; E-Value: 6e-26
Query Start/End: Original strand, 149 - 296
Target Start/End: Complemental strand, 1044 - 888
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| ||||||||||||| |||||||||| | ||||| | ||||  ||||||||||||||||| ||||||||||||||| ||| |||||    
T  1044 caatgttccgcaaatcgagtgttaacactctgagtttaccgagtttacgtgtttaggtaccaaaatcgtgttaactcggaggtaaactcggtttctggta 945  T
Q  249 aaatcagaa---------ggtttgaccgagttaacactcagtaaattcgtgtaaact 296  Q
    ||||| |||          ||||||||||||||||||| |||||| |||||||||||    
T  944 aaatcggaaagtttgatgagtttgaccgagttaacacttagtaaactcgtgtaaact 888  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573 (Bit Score: 60; Significance: 2e-25; HSPs: 2)
Name: scaffold0573
Description:

Target: scaffold0573; HSP #1
Raw Score: 60; E-Value: 2e-25
Query Start/End: Original strand, 192 - 326
Target Start/End: Original strand, 8860 - 8984
Alignment:
Q  192 tttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgaccgagttaacactcagtaaattcgtgt 291  Q
    ||||||| ||||  ||||||||||||||||| || |||||||||||||||| |||||||||| ||||||||| ||||||||||||||           ||    
T  8860 tttacatgtttaggtaccaaaatcgtgttaactctgaggtaaactcgatttctggtaaaatcggaaggtttggccgagttaacactc----------ggt 8949  T
Q  292 aaactcgaccgagtttaccatgttttacgagttta 326  Q
    |||||||||||||||||||| ||||||||||||||    
T  8950 aaactcgaccgagtttaccaagttttacgagttta 8984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0573; HSP #2
Raw Score: 58; E-Value: 4e-24
Query Start/End: Original strand, 424 - 538
Target Start/End: Original strand, 9133 - 9251
Alignment:
Q  424 tttcttctctgagttctcaaaccatgaataggggagcacatat----cagttagggttgcaatttcgacagtggaaattcagatttcgacgccggtgatt 519  Q
    |||||||||||||||||||||||||||| ||||||||||||||    ||||||||||||  |||||||| ||||||||||| ||||| |||||| | |||    
T  9133 tttcttctctgagttctcaaaccatgaacaggggagcacatatataccagttagggttgtgatttcgacggtggaaattcatatttcaacgccgtttatt 9232  T
Q  520 gtgacgtcggttagggttg 538  Q
    | |||  ||||||||||||    
T  9233 gcgacaccggttagggttg 9251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0543 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 10934 - 11047
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||||||||| |||||||||| ||  ||| ||||| | ||||||||||||  ||| ||||||||||||| || |||||||| |||||||||||||    
T  10934 caatgttccgcaaatcgagtgttaactctccgagattaccgagtttacatttttaggtacaaaaatcgtgttaactctgaggtaaattcgatttttggta 11033  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  11034 aaattggaaggttt 11047  T

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Target: scaffold0042 (Bit Score: 50; Significance: 2e-19; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 147 - 303
Target Start/End: Complemental strand, 57858 - 57693
Alignment:
Q  147 accaatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttgg 246  Q
    |||||| |||||||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||||||| ||| | |    
T  57858 accaatgttccgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaactcggtttctag 57759  T
Q  247 taaaatcagaag---------gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccga 303  Q
    ||||||||||||         ||||||  |||||||||||| ||||| ||||||||||||||||||    
T  57758 taaaatcagaaggtttaatgagtttgattgagttaacactcggtaaactcgtgtaaactcgaccga 57693  T

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Target: scaffold0110 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0110
Description:

Target: scaffold0110; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 157 - 265
Target Start/End: Complemental strand, 39419 - 39311
Alignment:
Q  157 cgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggtaaaatcaga 256  Q
    ||||||| |||||||||| ||  ||| ||||| | ||||| ||||||  |||||||||||||||||  | ||||| |||||| ||| ||||||||||  |    
T  39419 cgcaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtaccaaaatcgtgttaaccctgaggtcaactcggtttctggtaaaatcgaa 39320  T
Q  257 aggtttgac 265  Q
    |||||||||    
T  39319 aggtttgac 39311  T

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Target: scaffold0037 (Bit Score: 37; Significance: 0.00000000001; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 409 - 465
Target Start/End: Complemental strand, 37024 - 36968
Alignment:
Q  409 aaacgtgtctttttctttcttctctgagttctcaaaccatgaataggggagcacata 465  Q
    |||||| |||||||||||||||||| ||||||||||||||||| | ||||| |||||    
T  37024 aaacgtttctttttctttcttctctaagttctcaaaccatgaacatgggagtacata 36968  T

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Target: scaffold0263 (Bit Score: 36; Significance: 0.00000000005; HSPs: 1)
Name: scaffold0263
Description:

Target: scaffold0263; HSP #1
Raw Score: 36; E-Value: 0.00000000005
Query Start/End: Original strand, 259 - 326
Target Start/End: Complemental strand, 489 - 422
Alignment:
Q  259 gtttgaccgagttaacactcagtaaattcgtgtaaactcgaccgagtttaccatgttttacgagttta 326  Q
    ||||||||||||||||||||| |||| ||||||||| |||  |||||||||| | |||| ||||||||    
T  489 gtttgaccgagttaacactcactaaactcgtgtaaaatcgggcgagtttaccgttttttgcgagttta 422  T

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Target: scaffold0421 (Bit Score: 34; Significance: 0.0000000008; HSPs: 1)
Name: scaffold0421
Description:

Target: scaffold0421; HSP #1
Raw Score: 34; E-Value: 0.0000000008
Query Start/End: Original strand, 216 - 265
Target Start/End: Original strand, 1727 - 1776
Alignment:
Q  216 gtgttaattcggaggtaaactcgatttttggtaaaatcagaaggtttgac 265  Q
    ||||||| |||||||||||||||||||||||| ||||| ||| |||||||    
T  1727 gtgttaactcggaggtaaactcgatttttggtgaaatcggaaagtttgac 1776  T

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Target: scaffold1504 (Bit Score: 30; Significance: 0.0000002; HSPs: 1)
Name: scaffold1504
Description:

Target: scaffold1504; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 149 - 262
Target Start/End: Original strand, 1276 - 1389
Alignment:
Q  149 caatattccgcaaattgagtgttaacactttgagtttaccaaatttacatttttaaataccaaaatcgtgttaattcggaggtaaactcgatttttggta 248  Q
    |||| |||| ||||| |||||||||| ||  ||| ||||| | ||||| ||||||  ||| ||||||||||||| || |||||||| ||| ||| | |||    
T  1276 caatgttccacaaatcgagtgttaactctccgagattaccgagtttacgtttttaggtacaaaaatcgtgttaactctgaggtaaaatcggtttcttgta 1375  T
Q  249 aaatcagaaggttt 262  Q
    ||||  ||||||||    
T  1376 aaattggaaggttt 1389  T

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