View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4061_low_24 (Length: 305)
Name: NF4061_low_24
Description: NF4061
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4061_low_24 |
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Alignment Details
Target: chr8 (Bit Score: 285; Significance: 1e-160; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 285; E-Value: 1e-160
Query Start/End: Original strand, 7 - 291
Target Start/End: Complemental strand, 37279581 - 37279297
Alignment:
| Q |
7 |
aagaaaatggtgagttggagcgctttctgattaacaccatgccactctttaagggcatggagaaacaacgaaaaccatgatgatgattacaacatacctg |
106 |
Q |
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| T |
37279581 |
aagaaaatggtgagttggagcgctttctgattaacaccatgccactctttaagggcatggagaaacaacgaaaaccatgatgatgattacaacatacctg |
37279482 |
T |
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| Q |
107 |
aaaatgcatggaaaaagaatcaaggaagctgcaaataattactttcaagcaatggaaataaggtgcatagagtgtggtggtttccgcctcatgaggggtg |
206 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37279481 |
aaaatgcatggaaaaagaatcaaggaagctgcaaataattactttcaagcaatggaaataaggtgcatagagtgtggtggtttccgcctcatgaggggtg |
37279382 |
T |
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| Q |
207 |
ggagaagttaaacactgatggtacttgtaaaaagggttcattggcaaggtgtggtggtttgatttgtgattctatgggtagttgg |
291 |
Q |
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| T |
37279381 |
ggagaagttaaacactgatggtacttgtaaaaagggttcattggcaaggtgtggtggtttgatttgtgattctatgggtagttgg |
37279297 |
T |
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