View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4062_high_9 (Length: 239)
Name: NF4062_high_9
Description: NF4062
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4062_high_9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 6 - 239
Target Start/End: Original strand, 36128732 - 36128961
Alignment:
| Q |
6 |
attaagaatatacattagttacgatttataaatatctagctcatatatgaatttatttattaattattggtatgattgttaatgacttgattaaatggat |
105 |
Q |
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| T |
36128732 |
attaagaatatacattagttacgatttataaatatctagctcatatatgaattt----attaattattggtatgattgttaatgacttgattaaatggat |
36128827 |
T |
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| Q |
106 |
gaagtgaaggagatgttagaattacaatgatatatttgtatgtataccttgagacatgttcccaagtgaaatctgggaaccaactctccatgctggatct |
205 |
Q |
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| T |
36128828 |
gaagtgaaggagatgttagaattacaatgatatatttgtatgtataccttgagacatgttcccaagtgaaatctgggaaccaactctccatgctggatct |
36128927 |
T |
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| Q |
206 |
gatcttcaaaagtgcaagaacttcatcattagtc |
239 |
Q |
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| T |
36128928 |
gatcttcaaaagtgcaagaacttcatcattagtc |
36128961 |
T |
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