View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4063_high_24 (Length: 231)
Name: NF4063_high_24
Description: NF4063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4063_high_24 |
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Alignment Details
Target: chr4 (Bit Score: 192; Significance: 1e-104; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 192; E-Value: 1e-104
Query Start/End: Original strand, 1 - 216
Target Start/End: Original strand, 1734949 - 1735164
Alignment:
| Q |
1 |
catgccaaaatgtggtatttatcaaggggacacaatgtctccttgtttgttctttgtatgaacttatgaaagcaggtagagagggtccatatatctccta |
100 |
Q |
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| T |
1734949 |
catgccaaaatgtggtatttatcaaggggacacaatgtctccttgtttgttctttgtatgaactgatgaaagcaggtagagagggtccatatatctccta |
1735048 |
T |
|
| Q |
101 |
tcttatgtttgcagaagaaataattgattttggtttggcgtattacattgtctcggtcgctcattcatactataccgatgtataatatgatgtgcatgag |
200 |
Q |
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|||||||||||||||||||| ||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |
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| T |
1735049 |
tcttatgtttgcagaagaaaaaattggttttggtttggcgtattacattgtctcggttgctcattcatactataccgatgtataatataatgtgcatgag |
1735148 |
T |
|
| Q |
201 |
tatttgatgattcctc |
216 |
Q |
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|||||||||| ||||| |
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| T |
1735149 |
tatttgatgactcctc |
1735164 |
T |
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