View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4063_high_9 (Length: 399)
Name: NF4063_high_9
Description: NF4063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4063_high_9 |
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| [»] chr1 (1 HSPs) |
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Alignment Details
Target: chr1 (Bit Score: 370; Significance: 0; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 370; E-Value: 0
Query Start/End: Original strand, 18 - 399
Target Start/End: Complemental strand, 51342352 - 51341971
Alignment:
| Q |
18 |
ggtatgaccccaatagaattgttttatgaaaaacacaaacgatcatctgaaaaagctgtagaagaagtgaatggaatatcaaatacttttatagtagttg |
117 |
Q |
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| T |
51342352 |
ggtatgaccccaatagaattgttttatgaaaaacacaaacgatcgtctgaaaaagctgtagaagaagtgaatggaatatcaaatacttttatagtagttg |
51342253 |
T |
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| Q |
118 |
caacacttattatcacattagggatcactggagcgctcacaattcgtactaatcctgtcggtccaaagtcaatattattttgtgatgacatatggtacat |
217 |
Q |
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| T |
51342252 |
caacacttattatcacattagggatcactggagcgctcacaattcgtactaatcctgtcggtccaaagtcaatattattttgtgatgacatatggtacat |
51342153 |
T |
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| Q |
218 |
gatattcattctatcaattggagttggagtgagtttttgtgcatcatcagtacttttattcacctcagttattctcccttcaacttggaggttaacagga |
317 |
Q |
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| T |
51342152 |
gatattcattctatcaattggagttggagtgagtttttgtgcatcatcggtacttttattcacctcagttattctcccttcaacttggaggttaacagga |
51342053 |
T |
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| Q |
318 |
ggttatgtgtattcgaggataacaaggatgacaataggatacttgttcctttatgcctctgctttggtcatgggtctgtttt |
399 |
Q |
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| T |
51342052 |
ggttatgtgtattcgaggataacaaggatgacaataggatacttgttcctttatgcctctgctttggtcatgggtttgtttt |
51341971 |
T |
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