View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4063_low_26 (Length: 250)

Name: NF4063_low_26
Description: NF4063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4063_low_26
NF4063_low_26
[»] chr3 (49 HSPs)
chr3 (22-240)||(36750050-36750268)
chr3 (14-240)||(52492104-52492330)
chr3 (16-165)||(36750337-36750486)
chr3 (18-173)||(38922744-38922900)
chr3 (15-165)||(32490094-32490245)
chr3 (16-165)||(41755498-41755648)
chr3 (17-165)||(19132711-19132860)
chr3 (17-165)||(38923564-38923713)
chr3 (18-165)||(45242067-45242215)
chr3 (16-165)||(41756331-41756481)
chr3 (16-165)||(44687062-44687212)
chr3 (19-165)||(3970994-3971141)
chr3 (17-135)||(19132563-19132681)
chr3 (16-165)||(44686254-44686403)
chr3 (17-165)||(45242886-45243035)
chr3 (19-165)||(3998740-3998887)
chr3 (16-165)||(3971801-3971951)
chr3 (16-165)||(3997927-3998077)
chr3 (17-165)||(52491891-52492035)
chr3 (17-135)||(32489946-32490064)
chr3 (41-165)||(45500497-45500620)
chr3 (44-156)||(8436574-8436685)
chr3 (41-156)||(8440119-8440233)
chr3 (17-64)||(31556217-31556264)
chr3 (15-66)||(37105076-37105127)
chr3 (16-66)||(14667296-14667345)
chr3 (76-165)||(8653622-8653709)
chr3 (17-66)||(49757181-49757230)
chr3 (18-66)||(42145277-42145325)
chr3 (77-148)||(8427276-8427346)
chr3 (17-63)||(17226968-17227014)
chr3 (16-66)||(49756274-49756324)
chr3 (100-165)||(11267588-11267651)
chr3 (17-64)||(21811879-21811926)
chr3 (77-148)||(25025234-25025304)
chr3 (17-64)||(31556188-31556235)
chr3 (19-66)||(32994927-32994974)
chr3 (193-240)||(41756194-41756241)
chr3 (15-66)||(46719659-46719710)
chr3 (77-148)||(47737629-47737699)
chr3 (28-66)||(37104363-37104401)
chr3 (17-51)||(38923438-38923472)
chr3 (17-51)||(45242307-45242341)
chr3 (17-58)||(17227955-17227996)
chr3 (16-65)||(43638078-43638127)
chr3 (16-65)||(49749124-49749173)
chr3 (120-165)||(50305167-50305212)
chr3 (24-64)||(38337478-38337518)
chr3 (17-65)||(39901846-39901894)
[»] chr7 (43 HSPs)
chr7 (17-240)||(38072116-38072339)
chr7 (19-240)||(7677635-7677855)
chr7 (21-240)||(4261209-4261428)
chr7 (17-165)||(17145622-17145772)
chr7 (16-165)||(38071897-38072047)
chr7 (17-165)||(668179-668328)
chr7 (16-165)||(37864206-37864356)
chr7 (17-165)||(669002-669151)
chr7 (16-165)||(4261495-4261645)
chr7 (16-134)||(38778853-38778971)
chr7 (17-131)||(38779498-38779611)
chr7 (21-165)||(7677421-7677566)
chr7 (16-165)||(41194512-41194659)
chr7 (17-135)||(17145802-17145920)
chr7 (17-98)||(37468972-37469053)
chr7 (41-165)||(32859257-32859380)
chr7 (16-74)||(37468909-37468967)
chr7 (17-117)||(24322299-24322399)
chr7 (15-115)||(44909309-44909409)
chr7 (16-66)||(29006346-29006396)
chr7 (24-65)||(20890206-20890247)
chr7 (31-135)||(42607095-42607198)
chr7 (16-64)||(45887981-45888029)
chr7 (16-64)||(47331954-47332002)
chr7 (16-66)||(29007198-29007248)
chr7 (16-66)||(41224842-41224892)
chr7 (31-108)||(40257759-40257836)
chr7 (16-64)||(4985395-4985443)
chr7 (16-64)||(4989493-4989541)
chr7 (17-109)||(27599211-27599303)
chr7 (14-66)||(29314578-29314630)
chr7 (24-64)||(45887286-45887326)
chr7 (77-148)||(27855625-27855695)
chr7 (16-119)||(29315257-29315360)
chr7 (102-157)||(41195275-41195329)
chr7 (17-64)||(41533896-41533943)
chr7 (17-119)||(27600041-27600143)
chr7 (18-51)||(668420-668453)
chr7 (17-66)||(44896046-44896095)
chr7 (22-63)||(48259820-48259861)
chr7 (16-64)||(24321424-24321472)
chr7 (24-64)||(24322429-24322469)
chr7 (31-135)||(40257594-40257697)
[»] chr8 (36 HSPs)
chr8 (17-240)||(5035102-5035324)
chr8 (15-165)||(34992163-34992314)
chr8 (16-163)||(41859309-41859457)
chr8 (24-165)||(37639718-37639860)
chr8 (17-165)||(32536708-32536857)
chr8 (16-135)||(5034897-5035016)
chr8 (17-165)||(38023624-38023773)
chr8 (17-135)||(34992015-34992133)
chr8 (16-165)||(41859995-41860145)
chr8 (16-165)||(32537387-32537534)
chr8 (103-165)||(38024430-38024492)
chr8 (16-65)||(25876520-25876569)
chr8 (25-89)||(37640538-37640601)
chr8 (16-65)||(61453-61502)
chr8 (17-66)||(27918046-27918095)
chr8 (17-65)||(1365829-1365877)
chr8 (16-54)||(44098432-44098470)
chr8 (100-157)||(10501822-10501877)
chr8 (17-66)||(41092172-41092221)
chr8 (17-65)||(39254787-39254835)
chr8 (77-148)||(7818534-7818604)
chr8 (77-148)||(10806008-10806078)
chr8 (193-240)||(37639929-37639976)
chr8 (77-148)||(39852759-39852829)
chr8 (19-66)||(41348146-41348193)
chr8 (17-64)||(43924490-43924537)
chr8 (16-118)||(30272903-30273005)
chr8 (77-147)||(38778752-38778821)
chr8 (24-65)||(4364046-4364087)
chr8 (16-65)||(7424562-7424611)
chr8 (17-118)||(36936644-36936745)
chr8 (16-65)||(39255752-39255801)
chr8 (16-65)||(44751607-44751656)
chr8 (17-65)||(62240-62288)
chr8 (17-65)||(36936418-36936466)
chr8 (17-65)||(42345166-42345214)
[»] scaffold0041 (2 HSPs)
scaffold0041 (17-230)||(27221-27433)
scaffold0041 (17-94)||(27546-27623)
[»] chr5 (34 HSPs)
chr5 (16-173)||(33001931-33002087)
chr5 (16-165)||(33002715-33002865)
chr5 (17-165)||(686417-686565)
chr5 (17-165)||(15183916-15184065)
chr5 (16-163)||(8204119-8204267)
chr5 (16-165)||(8040194-8040344)
chr5 (17-165)||(15183088-15183238)
chr5 (16-145)||(12190078-12190207)
chr5 (16-135)||(36626560-36626679)
chr5 (18-165)||(687247-687395)
chr5 (16-135)||(8040374-8040493)
chr5 (178-240)||(33002584-33002646)
chr5 (16-117)||(33283971-33284072)
chr5 (17-64)||(39950404-39950451)
chr5 (21-117)||(33283169-33283265)
chr5 (17-64)||(2319266-2319313)
chr5 (23-66)||(4607470-4607513)
chr5 (17-119)||(16970979-16971081)
chr5 (17-66)||(4608589-4608638)
chr5 (16-65)||(13654932-13654981)
chr5 (16-64)||(2319968-2320016)
chr5 (16-64)||(26268343-26268391)
chr5 (44-96)||(33685772-33685824)
chr5 (17-53)||(39950444-39950480)
chr5 (16-67)||(13404701-13404752)
chr5 (17-64)||(26269022-26269069)
chr5 (17-51)||(686667-686701)
chr5 (16-66)||(2458353-2458403)
chr5 (16-65)||(8226641-8226690)
chr5 (17-66)||(31148444-31148493)
chr5 (22-63)||(39167442-39167483)
chr5 (76-156)||(42518811-42518891)
chr5 (17-65)||(26688166-26688214)
chr5 (17-65)||(26957897-26957945)
[»] chr4 (71 HSPs)
chr4 (17-173)||(39523164-39523319)
chr4 (16-165)||(11417686-11417836)
chr4 (16-165)||(26611182-26611332)
chr4 (16-165)||(10424958-10425108)
chr4 (16-165)||(21166274-21166424)
chr4 (16-165)||(29651231-29651381)
chr4 (17-165)||(10424123-10424272)
chr4 (21-173)||(38143628-38143781)
chr4 (17-165)||(45230365-45230514)
chr4 (17-165)||(36865616-36865765)
chr4 (17-135)||(11417867-11417985)
chr4 (22-165)||(26610350-26610495)
chr4 (17-165)||(38694850-38695002)
chr4 (17-165)||(45235859-45236008)
chr4 (15-135)||(31836390-31836510)
chr4 (18-165)||(29650416-29650564)
chr4 (17-135)||(38694702-38694820)
chr4 (17-165)||(21165447-21165596)
chr4 (16-135)||(9939301-9939420)
chr4 (16-165)||(39522374-39522524)
chr4 (17-165)||(31835148-31835297)
chr4 (18-135)||(36864818-36864935)
chr4 (16-163)||(9939124-9939269)
chr4 (35-135)||(38143506-38143606)
chr4 (31-165)||(25970120-25970250)
chr4 (31-165)||(36451327-36451461)
chr4 (55-173)||(11806129-11806244)
chr4 (34-165)||(23383327-23383457)
chr4 (44-165)||(17648044-17648165)
chr4 (31-159)||(36450742-36450871)
chr4 (16-166)||(25970701-25970852)
chr4 (15-66)||(47377597-47377648)
chr4 (178-240)||(39522593-39522655)
chr4 (17-109)||(30808621-30808713)
chr4 (22-65)||(3847891-3847934)
chr4 (15-65)||(47198603-47198653)
chr4 (16-65)||(42544487-42544536)
chr4 (17-70)||(47376852-47376905)
chr4 (17-117)||(38014870-38014970)
chr4 (22-65)||(3848578-3848621)
chr4 (24-66)||(11680283-11680325)
chr4 (24-66)||(11688562-11688604)
chr4 (22-64)||(25370511-25370553)
chr4 (16-66)||(28684231-28684281)
chr4 (17-66)||(37275088-37275137)
chr4 (15-64)||(46765169-46765218)
chr4 (16-65)||(52757812-52757861)
chr4 (76-146)||(5825393-5825459)
chr4 (17-65)||(25371545-25371593)
chr4 (16-118)||(12589286-12589388)
chr4 (193-240)||(29651115-29651162)
chr4 (14-65)||(55159177-55159228)
chr4 (17-51)||(10424385-10424419)
chr4 (24-66)||(12590202-12590244)
chr4 (17-51)||(21166137-21166171)
chr4 (16-66)||(23425206-23425256)
chr4 (24-66)||(25655638-25655680)
chr4 (17-51)||(29650655-29650689)
chr4 (17-51)||(31836221-31836255)
chr4 (16-66)||(31910553-31910603)
chr4 (17-51)||(45235733-45235767)
chr4 (16-65)||(30478308-30478357)
chr4 (17-66)||(42545562-42545611)
chr4 (16-65)||(47199395-47199444)
chr4 (16-65)||(48013316-48013365)
chr4 (16-65)||(55160067-55160115)
chr4 (16-64)||(11681275-11681323)
chr4 (16-64)||(11689554-11689602)
chr4 (100-148)||(20822706-20822754)
chr4 (17-61)||(23865321-23865365)
chr4 (18-66)||(52758709-52758757)
[»] chr6 (30 HSPs)
chr6 (19-165)||(3542816-3542963)
chr6 (17-173)||(33480519-33480676)
chr6 (17-135)||(3542993-3543111)
chr6 (17-165)||(15083217-15083366)
chr6 (17-165)||(22579935-22580084)
chr6 (17-165)||(33018167-33018316)
chr6 (19-165)||(33479698-33479846)
chr6 (22-165)||(15082402-15082546)
chr6 (15-135)||(33018346-33018466)
chr6 (16-155)||(7193337-7193474)
chr6 (21-161)||(22587213-22587354)
chr6 (16-135)||(7193508-7193627)
chr6 (21-124)||(22582420-22582523)
chr6 (17-66)||(24125972-24126021)
chr6 (17-70)||(24126713-24126766)
chr6 (16-65)||(7159341-7159390)
chr6 (17-65)||(7531829-7531877)
chr6 (193-240)||(22580153-22580200)
chr6 (22-64)||(10607406-10607448)
chr6 (24-66)||(10608319-10608361)
chr6 (15-65)||(14337557-14337607)
chr6 (17-51)||(15082638-15082672)
chr6 (17-51)||(22580597-22580631)
chr6 (17-51)||(22587083-22587117)
chr6 (17-51)||(33479938-33479972)
chr6 (16-117)||(1035351-1035452)
chr6 (16-65)||(7532440-7532489)
chr6 (42-90)||(4311163-4311211)
chr6 (17-65)||(9574571-9574619)
chr6 (31-119)||(25067796-25067884)
[»] scaffold0311 (1 HSPs)
scaffold0311 (15-165)||(58-210)
[»] chr2 (26 HSPs)
chr2 (17-165)||(21471853-21472002)
chr2 (16-165)||(21471016-21471166)
chr2 (15-165)||(38834385-38834536)
chr2 (16-135)||(37547997-37548116)
chr2 (17-131)||(14573261-14573374)
chr2 (17-165)||(4479603-4479750)
chr2 (16-135)||(38834566-38834685)
chr2 (17-135)||(13134318-13134436)
chr2 (16-134)||(14573930-14574048)
chr2 (17-65)||(33433160-33433208)
chr2 (42-97)||(30486909-30486964)
chr2 (15-65)||(5276463-5276513)
chr2 (16-53)||(1164788-1164825)
chr2 (17-66)||(16426553-16426602)
chr2 (17-66)||(40992222-40992271)
chr2 (16-64)||(41984726-41984774)
chr2 (15-66)||(2650227-2650278)
chr2 (102-157)||(4478936-4478990)
chr2 (77-148)||(11256696-11256766)
chr2 (16-66)||(24727820-24727870)
chr2 (17-59)||(24741811-24741853)
chr2 (16-66)||(30545434-30545484)
chr2 (16-65)||(4478850-4478899)
chr2 (16-65)||(19521917-19521966)
chr2 (15-64)||(41043329-41043378)
chr2 (17-69)||(30544727-30544779)
[»] chr1 (53 HSPs)
chr1 (17-165)||(43737729-43737878)
chr1 (17-165)||(16270207-16270357)
chr1 (17-135)||(23440795-23440913)
chr1 (16-163)||(48972346-48972494)
chr1 (17-165)||(9947995-9948144)
chr1 (17-145)||(9948807-9948935)
chr1 (17-165)||(23440617-23440765)
chr1 (16-165)||(51974436-51974586)
chr1 (17-165)||(16271047-16271196)
chr1 (31-173)||(6075988-6076127)
chr1 (16-135)||(43737908-43738027)
chr1 (17-173)||(48971705-48971862)
chr1 (17-165)||(51975126-51975275)
chr1 (17-165)||(193850-193997)
chr1 (17-163)||(50826992-50827138)
chr1 (17-173)||(38930312-38930469)
chr1 (41-165)||(12925897-12926020)
chr1 (31-165)||(6076767-6076901)
chr1 (41-165)||(20794313-20794436)
chr1 (35-165)||(47334217-47334347)
chr1 (52-165)||(17050488-17050600)
chr1 (41-165)||(31390726-31390847)
chr1 (19-165)||(38931145-38931293)
chr1 (17-166)||(47334798-47334948)
chr1 (47-111)||(27888701-27888765)
chr1 (178-229)||(6076636-6076687)
chr1 (16-66)||(1012546-1012596)
chr1 (52-116)||(40649516-40649580)
chr1 (16-65)||(51987826-51987875)
chr1 (44-132)||(46133720-46133807)
chr1 (76-165)||(27418222-27418311)
chr1 (16-65)||(35616775-35616824)
chr1 (16-65)||(45064685-45064734)
chr1 (18-63)||(49611562-49611607)
chr1 (17-65)||(8560839-8560887)
chr1 (17-65)||(49610706-49610754)
chr1 (17-65)||(51988464-51988512)
chr1 (77-148)||(7219068-7219138)
chr1 (77-148)||(51247888-51247958)
chr1 (77-148)||(51248439-51248509)
chr1 (16-66)||(1013471-1013521)
chr1 (17-51)||(16270901-16270935)
chr1 (17-51)||(38930574-38930608)
chr1 (16-66)||(45065385-45065435)
chr1 (23-65)||(48870753-48870795)
chr1 (75-148)||(37725437-37725509)
chr1 (17-65)||(194701-194749)
chr1 (16-64)||(8561737-8561785)
chr1 (16-108)||(11032176-11032268)
chr1 (24-64)||(14924681-14924721)
chr1 (24-64)||(14925343-14925383)
chr1 (17-65)||(37874064-37874112)
chr1 (15-63)||(48869767-48869815)
[»] scaffold0332 (1 HSPs)
scaffold0332 (17-160)||(9162-9306)
[»] scaffold0700 (1 HSPs)
scaffold0700 (42-156)||(5344-5457)
[»] scaffold0155 (1 HSPs)
scaffold0155 (17-66)||(17339-17388)


Alignment Details
Target: chr3 (Bit Score: 191; Significance: 1e-104; HSPs: 49)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 191; E-Value: 1e-104
Query Start/End: Original strand, 22 - 240
Target Start/End: Original strand, 36750050 - 36750268
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 121  Q
    |||||||||||||||||||||||| ||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  36750050 catttaatttgggaaaggagagttcttttccaccatggaaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 36750149  T
Q  122 ctagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccgaca 221  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||    
T  36750150 ctagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttccggca 36750249  T
Q  222 gcaaccatgatggtctgtg 240  Q
    ||||||||| |||| ||||    
T  36750250 gcaaccatggtggtgtgtg 36750268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 183; E-Value: 4e-99
Query Start/End: Original strand, 14 - 240
Target Start/End: Complemental strand, 52492330 - 52492104
Alignment:
Q  14 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactct 113  Q
    ||||||| |||||||||||||||| ||||||| ||| ||||||||| ||||||| |||||| ||||||||||||||||||||||||||||||||||||||    
T  52492330 ggaggtgtcatttaatttgggaaatgagagttcttttccaccatggaaaagttgttcatgtccattagattaaatgaggaatacattcttatcatactct 52492231  T
Q  114 ctcaaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagtt 213  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  52492230 ctcaaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagtt 52492131  T
Q  214 ttccgacagcaaccatgatggtctgtg 240  Q
    ||||| ||||||||||| |||| ||||    
T  52492130 ttccggcagcaaccatggtggtgtgtg 52492104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 36750486 - 36750337
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  36750486 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctct 36750387  T
Q  116 caaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  36750386 caaccactagattattttttatactatctttcacactctctctttcatgt 36750337  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 18 - 173
Target Start/End: Original strand, 38922744 - 38922900
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 117  Q
    |||||||||||||||||||||||||||| ||||| |||||||||||||||||||| | |||||||||||||||| || | |||| |||||||||||||||    
T  38922744 gtgccatttaatttgggaaaggagagttatttcctaccatgggaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctctca 38922843  T
Q  118 accactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 173  Q
    |||||||||||| ||||||| |||||||| ||| ||||||||||||||| |||||||    
T  38922844 accactagattatttttttatactatctttcacactctctctttcatgtcctcacac 38922900  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 32490245 - 32490094
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 114  Q
    ||||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  32490245 gaggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 32490146  T
Q  115 tcaaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||||| ||||| |||||||| ||| ||| |||||||||||    
T  32490145 tcaaccactagattatttttttatactatctttcacactccctctttcatgt 32490094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 41755498 - 41755648
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||| | |||  |||||||||||||    
T  41755498 aggtgtcatttaatttgggaaaggagagttttttcccaccatgagaaaattgatcatgttcattagattaaatgaggaacatatttctatcatactctct 41755597  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  41755598 caaccactatattatttttttatactatctttcacactctctctttcatgt 41755648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 19132860 - 19132711
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||||| |||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  19132860 ggtgccatttaatttgggaaaggaaagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcttatcatactctctc 19132761  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||| ||||||| ||||| | |||||| |||  ||||||||||||||    
T  19132760 aaccactggattatttttttatattatctttcacattctctctttcatgt 19132711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 38923713 - 38923564
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||| ||||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| | |||  ||||||||||||||    
T  38923713 ggtgccatttaatttgggaaatgagagttctttcccaccatggaaaagttgataatgttcattagattaaatgaggaacatatttctatcatactctctc 38923614  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  38923613 aaccactagattatttttttatactatctttcacactctctctttcatgt 38923564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 45242067 - 45242215
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 117  Q
    |||||||||||||||||||| ||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||    
T  45242067 gtgccatttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 45242166  T
Q  118 accactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  45242167 accactagattatttttttatactatctttcacactctctctttcatgt 45242215  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 41756481 - 41756331
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||| ||||||| || ||||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||| | |||| |||||||||||||    
T  41756481 aggtgtcatttaagttaggaaaggagagttctttcccatcatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctct 41756382  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  41756381 caaccattagattatttttttatactatctttcacactctctctttcatgt 41756331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 44687212 - 44687062
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||||||||||||| || ||| ||||||||| |||||||||||| ||||||||||||||||||||| | |||| |||||||||||||    
T  44687212 aggtgccatttaatttgggaaaggagaattcttttccaccatggaaaagttgatcatattcattagattaaatgaggaaaatattcctatcatactctct 44687113  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  44687112 caaccattagattatttttttatactatctttcacactctctctttcatgt 44687062  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 3970994 - 3971141
Alignment:
Q  19 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 118  Q
    ||||||||||||||||||| |||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  3970994 tgccatttaatttgggaaatgagagttttttttcaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 3971093  T
Q  119 ccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||| ||||| ||||||| |||||||| ||| |||||||||||||||    
T  3971094 ccacttgattatttttttatactatctttcacactctctctttcatgt 3971141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 19132563 - 19132681
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||||| || ||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  19132563 ggtgccatttaatttgggaaaggagagttctttcctactatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 19132662  T
Q  117 aaccactagattatttttt 135  Q
    |||||||||||||||||||    
T  19132663 aaccactagattatttttt 19132681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 44686254 - 44686403
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||| ||||||||||||||| | |||||| ||||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  44686254 aggtgccatttaatttggaaaaggagagtttttttc-accatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 44686352  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  44686353 caaccactagattatttttttatactatctttcacactctctctttcatgt 44686403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 45243035 - 45242886
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||| |||||| ||| |||||||||||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  45243035 ggtgccatttaatttgggaaagaagagttcttttccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 45242936  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| | |||||| ||| |||||||||||||||    
T  45242935 aaccactagattatttttttatattatctttcacactctctctttcatgt 45242886  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 3998887 - 3998740
Alignment:
Q  19 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 118  Q
    ||||||||||||||||||| |||||||||||  |||||||| |||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||    
T  3998887 tgccatttaatttgggaaatgagagttttttttcaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaa 3998788  T
Q  119 ccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||| ||||||| ||||| ||||||||  || |||||||||||||||    
T  3998787 ccacttgattatttttttatactatcttttacactctctctttcatgt 3998740  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 3971951 - 3971801
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||| ||||| || |||| |||||||  ||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  3971951 aggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctct 3971852  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  3971851 caaccactagattatttttttatactatctttcacactctctctttcatgt 3971801  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 3997927 - 3998077
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||| ||||| || |||| |||||||  ||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  3997927 aggtgccatttaatttaggaaatgaaagttctttcccatgatgggaaagttgatcatatccattagattaaatgaggaacatatttctatcatactctct 3998026  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  3998027 caaccactagattatttttttatactatctttcacactctctctttcatgt 3998077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 52491891 - 52492035
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||     ||| |||||||||||||| ||||||||||||| ||||| | |||  ||||||||||||||    
T  52491891 ggtgccatttaatttgggaaaggagagttctttcc-----tggaaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 52491985  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  52491986 aaccactagattatttttttatactatctttcacactctctctttcatgt 52492035  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 32489946 - 32490064
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||||||| || ||| |||||||||||||||||||||||| ||||||||||||| ||||| | |||  ||||||||||||||    
T  32489946 ggtgccatttaatttgggaaaggagaattcttttccaccatgggaaagttgatcatgtccattagattaaataaggaacatatttctatcatactctctc 32490045  T
Q  117 aaccactagattatttttt 135  Q
    |||||||  ||||||||||    
T  32490046 aaccactgaattatttttt 32490064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 45500497 - 45500620
Alignment:
Q  41 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 140  Q
    |||||| || |||| |||||||||||||| |||| ||||||||||||||||||| ||||||||||  ||||||||||| |||||||||||| |||   ||    
T  45500497 gagtttgtttccacaatgggaaagttgattatgtccattagattaaatgaggaacacattcttattctactctctcaa-cactagattattgttttatct 45500595  T
Q  141 atcttccaccctctctctttcatgt 165  Q
    |||||||||||||||||||||||||    
T  45500596 atcttccaccctctctctttcatgt 45500620  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 44 - 156
Target Start/End: Complemental strand, 8436685 - 8436574
Alignment:
Q  44 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatc 143  Q
    |||||| ||||||||  ||||||||| |||| |||| ||||||||| |||| ||||| ||||  |||| ||||||| | |||||||||||||||||||||    
T  8436685 tttttttccaccatgaaaaagttgataatgtgcatttgattaaatgtggaacacatttttatactactttctcaac-attagattattttttacactatc 8436587  T
Q  144 ttccaccctctct 156  Q
    |||||| ||||||    
T  8436586 ttccactctctct 8436574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 41 - 156
Target Start/End: Complemental strand, 8440233 - 8440119
Alignment:
Q  41 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 140  Q
    |||||||||  |||||||  ||||||||| |||| |||| ||||||||| |||| ||||| ||||  ||||||||||| || ||||||||||||||||||    
T  8440233 gagttttttttcaccatgaaaaagttgataatgtgcatttgattaaatgtggaacacattattatactactctctcaa-cattagattattttttacact 8440135  T
Q  141 atcttccaccctctct 156  Q
    ||||| ||| ||||||    
T  8440134 atctttcactctctct 8440119  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 31556264 - 31556217
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||    
T  31556264 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaag 31556217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 37105127 - 37105076
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  37105127 gaggtgccgtttaatttgggaaacgagacttttttcccaccatgggaaagtt 37105076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 14667296 - 14667345
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  14667296 aggtgccgtttaatttgggaaaggaga-ttttttcccaccatgggaaagtt 14667345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 76 - 165
Target Start/End: Complemental strand, 8653709 - 8653622
Alignment:
Q  76 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
    |||| ||| ||||||| || ||| |||||||||| || |||||| ||||||| ||||| ||||||||||||| |||||||||||||||||    
T  8653709 catttgatcaaatgagaaacacactcttatcatattccctcaac-actagatcattttctacactatcttcc-ccctctctctttcatgt 8653622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 49757230 - 49757181
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||| ||||||||||||||||||| |||||||| ||||||||||||||    
T  49757230 ggtgccgtttaatttgggaaaggagacttttttcctaccatgggaaagtt 49757181  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 42145325 - 42145277
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||||||||||| |||||| ||||||| ||||||||    
T  42145325 gtgccatttaatttgggaaaggagactttttttccaccataggaaagtt 42145277  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 8427276 - 8427346
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||||||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  8427276 attagattaaatgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 8427346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 17226968 - 17227014
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 63  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||    
T  17226968 ggtggcatttaatttgggaaaggagatttctttcccaccatgggaaa 17227014  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 49756274 - 49756324
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||||| ||||||  ||| ||||||||||||||||||||    
T  49756274 aggtgccatttaatttggaaaaggaatgttatttcccaccatgggaaagtt 49756324  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 165
Target Start/End: Complemental strand, 11267651 - 11267588
Alignment:
Q  100 tcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||  ||| |||||| |||||||||||||||||||||| ||||||||||| |||||    
T  11267651 tcttatcatactccatca-ccactatattattttttacactatcttcc-ccctctctcttccatgt 11267588  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 21811879 - 21811926
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    |||||| |||||||||||||| |||| |||||||| ||||||||||||    
T  21811879 ggtgccgtttaatttgggaaatgagacttttttcctaccatgggaaag 21811926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 25025234 - 25025304
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||| ||| ||| | ||||||| ||| |||||||||| |||||||| ||||| |||||||||||||    
T  25025234 attagattaagtgaagaacatattcttaacatgctctctcaac-actagattttttttcacactatcttcca 25025304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 31556188 - 31556235
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||| ||||||||||| |||||||  |||||||||    
T  31556188 ggtgccatttaatttggaaaaggagagttctttcccatgatgggaaag 31556235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 32994927 - 32994974
Alignment:
Q  19 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||||||| | | |||||||||| ||||||||||||    
T  32994927 tgccatttaatttgggaaagcacatttttttcccatcatgggaaagtt 32994974  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 41756194 - 41756241
Alignment:
Q  193 aaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 240  Q
    ||||| |||| ||||||||||||||| |||||||||||||||| ||||    
T  41756194 aaaatcgtacgctaacaagttttccggcagcaaccatgatggtgtgtg 41756241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 46719659 - 46719710
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||||||||| |  ||||||||| || ||||||||||||    
T  46719659 gaggtgccatttaatttgggaaatgctagttttttctcatcatgggaaagtt 46719710  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 47737699 - 47737629
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  47737699 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 47737629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 28 - 66
Target Start/End: Original strand, 37104363 - 37104401
Alignment:
Q  28 atttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||| |||||| ||||||||||||||||    
T  37104363 atttgggaaaggagactttttttccaccatgggaaagtt 37104401  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 38923438 - 38923472
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  38923438 ggtgccatttaatttgggaaaggagagttctttcc 38923472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 45242341 - 45242307
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  45242341 ggtgccatttaatttgggaaaggagagttctttcc 45242307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 58
Target Start/End: Complemental strand, 17227996 - 17227955
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatg 58  Q
    |||| ||||||||||||||||||||| || ||||||||||||    
T  17227996 ggtggcatttaatttgggaaaggagacttctttcccaccatg 17227955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 43638127 - 43638078
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  43638127 aggtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 43638078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 49749124 - 49749173
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||| ||||||||||| | |||||||||| ||| |||||||    
T  49749124 aggtgccatttaacttgggaaaggaaatttttttcccatcataggaaagt 49749173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 120 - 165
Target Start/End: Complemental strand, 50305212 - 50305167
Alignment:
Q  120 cactagattattttttacactatcttccaccctctctctttcatgt 165  Q
    ||||| |||||| ||||| ||||||||||||||||||||| |||||    
T  50305212 cactatattattctttacgctatcttccaccctctctcttccatgt 50305167  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 38337518 - 38337478
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  38337518 tttaatttgggaaagggaagttgtttcccaccatgggaaag 38337478  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 39901846 - 39901894
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||| |||||  ||||||| ||||||| |||||||||||||||||||    
T  39901846 ggtgccgtttaacctgggaaatgagagttctttcccaccatgggaaagt 39901894  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 188; Significance: 1e-102; HSPs: 43)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 188; E-Value: 1e-102
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 38072339 - 38072116
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||| ||||||| ||| |||||||||||||||||||||||| ||||||||||||||| |||||||||||||||||||||||||    
T  38072339 ggtgccatttaatttgggaaatgagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgatgaatacattcttatcatactctctc 38072240  T
Q  117 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 216  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  38072239 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttc 38072140  T
Q  217 cgacagcaaccatgatggtctgtg 240  Q
    || ||||||||||| |||| ||||    
T  38072139 cggcagcaaccatggtggtgtgtg 38072116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 19 - 240
Target Start/End: Complemental strand, 7677855 - 7677635
Alignment:
Q  19 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 118  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||    
T  7677855 tgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacacattcttatcatattctctcaa 7677756  T
Q  119 ccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccg 218  Q
    | |||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||    
T  7677755 c-actaaattattttttacaatatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacgctaacaagttttccg 7677657  T
Q  219 acagcaaccatgatggtctgtg 240  Q
    |||||||||||| |||| ||||    
T  7677656 acagcaaccatggtggtgtgtg 7677635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 172; E-Value: 2e-92
Query Start/End: Original strand, 21 - 240
Target Start/End: Original strand, 4261209 - 4261428
Alignment:
Q  21 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 120  Q
    ||||||||||| ||||||||||||| ||| | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||    
T  4261209 ccatttaatttaggaaaggagagttcttttctaccatgggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctcaacc 4261308  T
Q  121 actagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttccgac 220  Q
    |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||  ||||||||||||||| |    
T  4261309 actagattattttttacactatcttccaacctctctctttcatgttctcacactatatttgtttgatccttgaaaatggtatgctaacaagttttccggc 4261408  T
Q  221 agcaaccatgatggtctgtg 240  Q
    |||||||||| |||| ||||    
T  4261409 agcaaccatggtggtgtgtg 4261428  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 17145622 - 17145772
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  17145622 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 17145721  T
Q  117 aaccactagatta--ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||  ||||||| |||||||| ||| |||||||||||||||    
T  17145722 aaccactagattattttttttatactatctttcacactctctctttcatgt 17145772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 38071897 - 38072047
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||| ||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  38071897 aggtgccatttaatttaggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 38071996  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38071997 caaccactagattatttttttatactatctttcacactctctctttcatgt 38072047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 668179 - 668328
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| ||||||||||||||    
T  668179 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctctc 668278  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||| |||||| ||||||| |||||||| ||| |||||||||||||||    
T  668279 aaccaccagattatttttttatactatctttcacactctctctttcatgt 668328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 37864356 - 37864206
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||||||||  |||||| |||||||||||||||||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  37864356 aggtgccatttaatttgggaaataagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 37864257  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  37864256 caaccactagattatttttttatactatctttcacactctctctttcatgt 37864206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 669151 - 669002
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||| | |||||||| |||||||||| | |||| ||||||||||||||    
T  669151 ggtgccatttaatttgggaaatgagagttttttcccaccataggaaagttgatcatatccattagatcaaatgaggaacatattcctatcatactctctc 669052  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  669051 aaccactagattatttttttatactatctttcacactctctctttcatgt 669002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 4261645 - 4261495
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||  |||||||||||||    
T  4261645 aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatatttctatcatactctct 4261546  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||| ||||||||| ||||| |||||||| ||| |||||||||||||||    
T  4261545 caaccattagattatttttttatactatctttcacactctctctttcatgt 4261495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 16 - 134
Target Start/End: Original strand, 38778853 - 38778971
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||  | |||| |||||||||||||    
T  38778853 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggagcatattcctatcatactctct 38778952  T
Q  116 caaccactagattattttt 134  Q
    |||||||||||||||||||    
T  38778953 caaccactagattattttt 38778971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 131
Target Start/End: Complemental strand, 38779611 - 38779498
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||| ||||||||||    
T  38779611 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcttataatactctctc 38779512  T
Q  117 aaccactagattatt 131  Q
    || ||||||||||||    
T  38779511 aa-cactagattatt 38779498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 21 - 165
Target Start/End: Original strand, 7677421 - 7677566
Alignment:
Q  21 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 120  Q
    |||||||||||||||||||||| || ||||||||||||  |||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||||||    
T  7677421 ccatttaatttgggaaaggagaattctttcccaccatgaaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaacc 7677520  T
Q  121 actagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||| |||| ||||||| ||||||||  || |||||||||||||||    
T  7677521 actaaattatttttttatactatcttttacactctctctttcatgt 7677566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 41194512 - 41194659
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||| ||||| ||| ||||||||| | |||||||||||||||| |    
T  41194512 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttaatcatgtccattaaatt-aatgaggaacatattcttatcatactcttt 41194610  T
Q  116 caaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
    | | ||||| ||||||||||| | |||||| || | ||||||||||||||    
T  41194611 cca-cactaaattattttttatattatctttcatcatctctctttcatgt 41194659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 17145920 - 17145802
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||   || ||||||||||||||||||| |||||||||||||||  || | |||| ||||||||||||||    
T  17145920 ggtgccatttaatttgggaaaggagagttcttttttactatgggaaagttgatcatgtccattagattaaatgaataacatattcctatcatactctctc 17145821  T
Q  117 aaccactagattatttttt 135  Q
    |||||||||||||||||||    
T  17145820 aaccactagattatttttt 17145802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 74; E-Value: 5e-34
Query Start/End: Original strand, 17 - 98
Target Start/End: Complemental strand, 37469053 - 37468972
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaataca 98  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  37469053 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaataca 37468972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 57; E-Value: 7e-24
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 32859257 - 32859380
Alignment:
Q  41 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 140  Q
    |||||||||  || || ||||||||||||  | | |||||||||||||| |||| ||||||||||  |||||||||||| | || |||||||||||||||    
T  32859257 gagttttttttcatcacgggaaagttgatagtatgcattagattaaatgtggaacacattcttatactactctctcaac-attaaattattttttacact 32859355  T
Q  141 atcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| |||||||||    
T  32859356 atcttccaccctctcactttcatgt 32859380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 55; E-Value: 1e-22
Query Start/End: Original strand, 16 - 74
Target Start/End: Original strand, 37468909 - 37468967
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgt 74  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||    
T  37468909 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgt 37468967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 9e-17
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 24322399 - 24322299
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||||  |||||| |||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| |||||||||||||||    
T  24322399 ggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacatttttatcatactctctc 24322300  T
Q  117 a 117  Q
    |    
T  24322299 a 24322299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 15 - 115
Target Start/End: Complemental strand, 44909409 - 44909309
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 114  Q
    |||||||| ||||||||||||||||  ||||||||||||||||||||||| |  |  ||  | || ||| |||||||||||||||| | |||||||||||    
T  44909409 gaggtgccgtttaatttgggaaaggtaagttttttcccaccatgggaaaggtttttttggccgttggatcaaatgaggaatacattttaatcatactctc 44909310  T
Q  115 t 115  Q
    |    
T  44909309 t 44909309  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 29006346 - 29006396
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||||||||||   ||||||||||||||||||||||||    
T  29006346 aggtgccatttaatttgggaaaggcttgttttttcccaccatgggaaagtt 29006396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 20890206 - 20890247
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||| ||||||||||||||||||||||||    
T  20890206 tttaatttgggaaaggacagttttttcccaccatgggaaagt 20890247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 42607095 - 42607198
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 130  Q
    ||||||||| || || ||||||||||||||||||||| |  ||| |||||||| ||||||| || ||| |||||||||  ||| |||| |||| ||||||    
T  42607095 tgggaaaggggaattgtttcccaccatgggaaagttgtttttgtccattagatcaaatgagaaacacaatcttatcatgatctatcaa-cacttgattat 42607193  T
Q  131 ttttt 135  Q
    |||||    
T  42607194 ttttt 42607198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 45888029 - 45887981
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  45888029 aggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 45887981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 47332002 - 47331954
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  47332002 aggtgacatttaatttgggaaaggctagttttttcccaccatgggaaag 47331954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 29007248 - 29007198
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||| ||||||||||||||||||   ||||||||||||||||||||||||    
T  29007248 aggtgtcatttaatttgggaaaggcttgttttttcccaccatgggaaagtt 29007198  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 41224892 - 41224842
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||||||||||    |||||||||||||||||||||||    
T  41224892 aggtgccatttaatttgggaaaggcttattttttcccaccatgggaaagtt 41224842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 31 - 108
Target Start/End: Complemental strand, 40257836 - 40257759
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcat 108  Q
    ||||||| | ||||| |||||||||||| |||||||| |  ||| |||||||| ||||||| || |||||||||||||    
T  40257836 tgggaaatgggagttgtttcccaccatgagaaagttgtttttgtccattagatcaaatgagaaacacattcttatcat 40257759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 4985443 - 4985395
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  4985443 aggtgacatttaatttgggaaatgctagttttttcccaccatgggaaag 4985395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 4989541 - 4989493
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  4989541 aggtgacatttaatttgggaaatgctagttttttcccaccatgggaaag 4989493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 27599211 - 27599303
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcata 109  Q
    |||| |||||||  ||||||||| ||||| |||||||||||||||||||| |   ||  ||||||||||| | | ||| ||||||||||||||    
T  27599211 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaacacattcttatcata 27599303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 14 - 66
Target Start/End: Original strand, 29314578 - 29314630
Alignment:
Q  14 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||||| ||||||   ||||||| ||||||||||||||||    
T  29314578 ggaggtgccatttaatttgagaaaggcttgtttttttccaccatgggaaagtt 29314630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 45887286 - 45887326
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||  |||||||||||||||||||||||    
T  45887286 tttaatttgggaaaggctagttttttcccaccatgggaaag 45887326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 27855625 - 27855695
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  27855625 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 27855695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 119
Target Start/End: Complemental strand, 29315360 - 29315257
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||| ||||||||||||||||   |||||||||||| |||||||||||   |  |   ||||||||  ||||| ||||||| ||||||||||||| ||    
T  29315360 aggtgcaatttaatttgggaaagactagttttttcccatcatgggaaagtaagttttaaccattagatctaatgaagaatacactcttatcatactccct 29315261  T
Q  116 caac 119  Q
    ||||    
T  29315260 caac 29315257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Complemental strand, 41195329 - 41195275
Alignment:
Q  102 ttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 157  Q
    ||||||||||||||| || |||||||||||||||| |||||||| || ||||||||    
T  41195329 ttatcatactctctccac-actagattattttttatactatctttcatcctctctc 41195275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 41533896 - 41533943
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    |||||| ||||||||||||||||  |||||||| ||||||||||||||    
T  41533896 ggtgccgtttaatttgggaaaggtaagtttttttccaccatgggaaag 41533943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 27600143 - 27600041
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||| |||||||  ||||||||| ||||| |||||||||||||||||||| |   ||  || |||||||| | | ||| ||||||||||||||  |||||    
T  27600143 ggtggcatttaaaatgggaaaggggagttgtttcccaccatgggaaagttaaatttgaccactagattaagtaatgaacacattcttatcatagactctc 27600044  T
Q  117 aac 119  Q
    |||    
T  27600043 aac 27600041  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 18 - 51
Target Start/End: Complemental strand, 668453 - 668420
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcc 51  Q
    |||||||||||||||||||||||||||| |||||    
T  668453 gtgccatttaatttgggaaaggagagttctttcc 668420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 44896046 - 44896095
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||| |||||||||||||||   ||||||| |||||||||||||||||    
T  44896046 ggtgccgtttaatttgggaaagactagtttttccccaccatgggaaagtt 44896095  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 48259861 - 48259820
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaa 63  Q
    |||||||||||||||| |  ||||||||||||||||||||||    
T  48259861 catttaatttgggaaatgttagttttttcccaccatgggaaa 48259820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 24321424 - 24321472
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||||||||||  |||||| ||||| ||| ||||||    
T  24321424 aggtgccatttaatttgggaaaggttagttttatcccatcataggaaag 24321472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 24322429 - 24322469
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||| | |||||||||| ||||||||||    
T  24322429 tttaatttgggaaaggaaacttttttcccatcatgggaaag 24322469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 135
Target Start/End: Original strand, 40257594 - 40257697
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 130  Q
    ||||||| ||||||| ||| | ||||||| ||||||  |  ||| |||||||| ||||||| || |||||||||||||  ||| |||| |||| ||||||    
T  40257594 tgggaaatgagagttgttttcgaccatggaaaagttatttttgtccattagatcaaatgagaaacacattcttatcatgatctatcaa-cacttgattat 40257692  T
Q  131 ttttt 135  Q
    |||||    
T  40257693 ttttt 40257697  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 180; Significance: 3e-97; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 17 - 240
Target Start/End: Complemental strand, 5035324 - 5035102
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||| ||||||| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  5035324 ggtgccatttaatttgggaaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaatacattcttatcatactctctc 5035225  T
Q  117 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 216  Q
    ||| |||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5035224 aac-actaaattatgttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 5035126  T
Q  217 cgacagcaaccatgatggtctgtg 240  Q
    || ||||||||||| |||| ||||    
T  5035125 cggcagcaaccatggtggtgtgtg 5035102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 34992314 - 34992163
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 114  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||    
T  34992314 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctc 34992215  T
Q  115 tcaaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  34992214 tcaaccactaaattatttttttatactatctttcacactctctctttcatgt 34992163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 41859309 - 41859457
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| | ||||||||||||| ||| | |||| |||||||||||||    
T  41859309 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccgttagattaaatgaagaacatattcatatcatactctct 41859408  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcat 163  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  41859409 caaccactagattatttttttatactatctttcacactctctctttcat 41859457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 99; E-Value: 6e-49
Query Start/End: Original strand, 24 - 165
Target Start/End: Original strand, 37639718 - 37639860
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccact 123  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||| |||||||||||||||||    
T  37639718 tttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatgatactctctcaaccact 37639817  T
Q  124 agatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||| ||||||| |||||||| ||| |||||||||||||||    
T  37639818 agattatttttttatactatctttcacactctctctttcatgt 37639860  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 32536708 - 32536857
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||| ||||| ||||||| |||||||||||||||||||||||||||| |||||||||||||| |||| | |||| ||||||||||||||    
T  32536708 ggtgccatttaatttaggaaatgagagttctttcccaccatgggaaagttgatcatgtccattagattaaatggggaacatattcctatcatactctctc 32536807  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  32536808 aaccactagattatttttttatactatctttcacactctctctttcatgt 32536857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 5034897 - 5035016
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||| ||||||||| | |||| |||||||||||||    
T  5034897 aggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattgaatgaggaacatattcatatcatactctct 5034996  T
Q  116 caaccactagattatttttt 135  Q
    ||||||||||||||||||||    
T  5034997 caaccactagattatttttt 5035016  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 38023624 - 38023773
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||| ||||||||||||||||||||| || ||| ||| ||||| |||||||||||||||||||||||||||||||||| | |||  ||||||||||||||    
T  38023624 ggtgtcatttaatttgggaaaggagaattcttttccatcatggaaaagttgatcatgttcattagattaaatgaggaacatatttctatcatactctctc 38023723  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38023724 aaccactagattatttttttatactatctttcacactctctctttcatgt 38023773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 34992015 - 34992133
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||| ||||||| ||| ||||||||| |||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  34992015 ggtgccatttaatttgggaaacgagagttattttccaccatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 34992114  T
Q  117 aaccactagattatttttt 135  Q
    |||||||| ||||||||||    
T  34992115 aaccactaaattatttttt 34992133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 41860145 - 41859995
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||||||||| |||||| |||   || |||| |||||||||||||| ||||||||||||||||||| | |||  ||||||||| |||    
T  41860145 aggtgccatttaatttgggaaagaagagttattttttactatggaaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactttct 41860046  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  41860045 caaccactatattatttttttatactatctttcacactctctctttcatgt 41859995  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 69; E-Value: 5e-31
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 32537534 - 32537387
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||| ||||||||||||||||| ||||||| ||| |||   || ||||||| ||||||| ||||| ||||||| ||||| | ||||||||||||||||||    
T  32537534 aggtaccatttaatttgggaaatgagagttcttttcca---tgagaaagttaatcatgtccattatattaaataaggaacatattcttatcatactctct 32537438  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||| ||||| |||||||| | | |||||||||||||||    
T  32537437 caaccactagattatttttttatactatctttcgcactctctctttcatgt 32537387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 103 - 165
Target Start/End: Complemental strand, 38024492 - 38024430
Alignment:
Q  103 tatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  38024492 tatcatactctctcaaccactagattattttttatactatctttcacactctctctttcatgt 38024430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 42; E-Value: 0.000000000000006
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 25876520 - 25876569
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| ||| ||||||||||||||||||||||    
T  25876520 aggtgccatttaatttgggaaagaagatttttttcccaccatgggaaagt 25876569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 25 - 89
Target Start/End: Complemental strand, 37640601 - 37640538
Alignment:
Q  25 ttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatg 89  Q
    |||||||||||||||||||||||||  ||| ||||| |||||||||||||| |||||||||||||    
T  37640601 ttaatttgggaaaggagagtttttttacactatggg-aagttgatcatgtttattagattaaatg 37640538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 61453 - 61502
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  61453 aggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 61502  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 27918095 - 27918046
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||| |||||||||||||| |||| |||||||||||||||||||||||    
T  27918095 ggtgccgtttaatttgggaaatgagacttttttcccaccatgggaaagtt 27918046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 1365829 - 1365877
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||||||||||||||||| || |||||||||||||||||||    
T  1365829 ggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 1365877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 54
Target Start/End: Complemental strand, 44098470 - 44098432
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccac 54  Q
    |||||||||||||||||||||||||||||| ||||||||    
T  44098470 aggtgccatttaatttgggaaaggagagttctttcccac 44098432  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 100 - 157
Target Start/End: Complemental strand, 10501877 - 10501822
Alignment:
Q  100 tcttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 157  Q
    ||||||||||||| |||||| ||||||||||||||||||||||| || ||||||||||    
T  10501877 tcttatcatactc-ctcaac-actagattattttttacactatcatcaaccctctctc 10501822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 41092172 - 41092221
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  41092172 ggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaagtt 41092221  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 39254787 - 39254835
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||||||||||||||||| || ||||||||||| |||||||    
T  39254787 ggtggcatttaatttgggaaaggagacttctttcccaccataggaaagt 39254835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 7818534 - 7818604
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||| ||| ||| | ||||||||||| ||||||||| ||||||||| || || |||||||||||||    
T  7818534 attagattaagtgaagaacatattcttatcatgctctctcaa-cactagatttttcttcacactatcttcca 7818604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 10806008 - 10806078
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||||||| ||| | ||||||| ||| ||||||||| ||||||||| || || |||||||||||||    
T  10806008 attagattaaatgaagaacatattcttaacatgctctctcaa-cactagatttttcttcacactatcttcca 10806078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 37639976 - 37639929
Alignment:
Q  193 aaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 240  Q
    ||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  37639976 aaaatcgtacgctaacaagttttccgacagcaaccatggtggtgtgtg 37639929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 39852829 - 39852759
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  39852829 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 39852759  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 19 - 66
Target Start/End: Original strand, 41348146 - 41348193
Alignment:
Q  19 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||| ||||||||||||||||  ||||||| |||||||||||||||||    
T  41348146 tgccgtttaatttgggaaaggttagtttttccccaccatgggaaagtt 41348193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 43924490 - 43924537
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    |||| ||||||||||||||||||  |||| ||||||||||||||||||    
T  43924490 ggtggcatttaatttgggaaagggaagttgtttcccaccatgggaaag 43924537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 118
Target Start/End: Complemental strand, 30273005 - 30272903
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||| ||||||||||||||| | | |||||||||| |||||||||||   |  |   ||||||||| ||||| ||||||| | ||||||||||| ||    
T  30273005 aggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagtaagttttaaccattagattcaatgaagaatacacttttatcatactccct 30272906  T
Q  116 caa 118  Q
    |||    
T  30272905 caa 30272903  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 77 - 147
Target Start/End: Complemental strand, 38778821 - 38778752
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcc 147  Q
    |||||||||| ||| ||||| ||| ||| ||||||||||||| ||||||||| || || ||||||||||||    
T  38778821 attagattaagtgaagaatatatttttaacatactctctcaa-cactagatttttcttcacactatcttcc 38778752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 24 - 65
Target Start/End: Original strand, 4364046 - 4364087
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||| | |||||||||| |||||||||||    
T  4364046 tttaatttgggaaaggaaacttttttcccatcatgggaaagt 4364087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 7424611 - 7424562
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||| |||||||||| ||||| ||| |||||| |||||||||||||||    
T  7424611 aggtgcaatttaatttgagaaagaagactttttttccaccatgggaaagt 7424562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 36936745 - 36936644
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||| ||||||||||||||| | | |||||||||| |||||||||||  ||  |   ||||||||| ||| | ||||||| | ||||||||||| |||    
T  36936745 ggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagtaaattttaaccattagattcaataaagaatacacttttatcatactccctc 36936646  T
Q  117 aa 118  Q
    ||    
T  36936645 aa 36936644  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 39255801 - 39255752
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| ||||||| |||||||| |||| || |||||||||||||||||||    
T  39255801 aggtggcatttaacttgggaaatgagacttctttcccaccatgggaaagt 39255752  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 44751607 - 44751656
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| ||||||| ||||||||||||| || ||||||| |||||||||||    
T  44751607 aggtggcatttaacttgggaaaggagacttctttcccatcatgggaaagt 44751656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 62288 - 62240
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||||||| ||||||||| || ||||||||||| |||||||    
T  62288 ggtgacatttaatttgagaaaggagacttctttcccaccataggaaagt 62240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 36936466 - 36936418
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||| ||||||||||||||| | | |||||||||| |||||||||||    
T  36936466 ggtgccgtttaatttgggaaagcaaacttttttcccatcatgggaaagt 36936418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 42345166 - 42345214
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  42345166 ggtgccatttaatttgggaaagtaaacttctttcccatcatgggaaagt 42345214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041 (Bit Score: 174; Significance: 1e-93; HSPs: 2)
Name: scaffold0041
Description:

Target: scaffold0041; HSP #1
Raw Score: 174; E-Value: 1e-93
Query Start/End: Original strand, 17 - 230
Target Start/End: Original strand, 27221 - 27433
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||||||    
T  27221 ggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacacattcttatcatactctctc 27320  T
Q  117 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacactaaatttgtttgatccttgaaaatggtacactaacaagttttc 216  Q
    ||| |||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| |||||||||||||    
T  27321 aac-actaaattattttttacactatcttccaccctctctctttcatgttctcatactaaatttgtttgatccttgaaaatggtacgctaacaagttttc 27419  T
Q  217 cgacagcaaccatg 230  Q
    || |||||||||||    
T  27420 cggcagcaaccatg 27433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0041; HSP #2
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 17 - 94
Target Start/End: Complemental strand, 27623 - 27546
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaa 94  Q
    ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| | |||||||||||||||||||    
T  27623 ggtgccatttaatttggaaaaggagagttttttcccaccatgggaaagttgatcatatccattagattaaatgaggaa 27546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 126; Significance: 4e-65; HSPs: 34)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 126; E-Value: 4e-65
Query Start/End: Original strand, 16 - 173
Target Start/End: Original strand, 33001931 - 33002087
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||| ||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| |||||    
T  33001931 aggtaccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaatacattcttatcatattctct 33002030  T
Q  116 caaccactagattattttttacactatcttccaccctctctctttcatgttctcacac 173  Q
    ||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  33002031 caa-cactaaattattttttacactatcttccaccctctctctttcatgttctcacac 33002087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 33002865 - 33002715
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  33002865 aggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 33002766  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  33002765 caaccactagattatttttttatactatctttcacactctctctttcatgt 33002715  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 686417 - 686565
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||| ||||||    
T  686417 ggtgccatttaatttgggaaaggagagtttt-tcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatattctctc 686515  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  686516 aaccactagattatttttttatactatctttcacactctctctttcatgt 686565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 15184065 - 15183916
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  15184065 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 15183966  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| |||||  ||||||| ||| |||||||||||||||    
T  15183965 aaccactagattatttttttatgctatctttcacactctctctttcatgt 15183916  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 105; E-Value: 1e-52
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 8204119 - 8204267
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||| |||    
T  8204119 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactatct 8204218  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcat 163  Q
    |||||||||||||| ||||||| |||||||| ||| |||||||||||||    
T  8204219 caaccactagattatttttttatactatctttcacactctctctttcat 8204267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 8040194 - 8040344
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||||||||||| |||| ||||||| | |||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||    
T  8040194 aggtgccatttaatttgggaaaggacagttctttcccatcgtgggaaagttgatcatgtccattagattaaatgaggaatatattcttatcatactctct 8040293  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  8040294 caaccactacattatttttttatactatctttcacactctctctttcatgt 8040344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 15183088 - 15183238
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttt-tttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||| | |||  |||||||||||||    
T  15183088 ggtgccatttaatttgggaaaggagagtttatttcccatcatgagaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 15183187  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||| ||||||| |||||||| ||| ||||| |||||||||    
T  15183188 caaccactagattatttttttatactatctttcacactctcactttcatgt 15183238  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 16 - 145
Target Start/End: Complemental strand, 12190207 - 12190078
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||  |||||||||||||    
T  12190207 aggtgccatttaatttgggaaaagagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctct 12190108  T
Q  116 caaccactagattattttttacactatctt 145  Q
    ||| || |||||||||||||| | ||||||    
T  12190107 caatcattagattattttttatattatctt 12190078  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 36626679 - 36626560
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||| ||||||| |||||||||||||||||||||||||||| | ||| ||||||| ||||||| ||||||||||||||||||    
T  36626679 aggtgccatttaatttgggaaatgagagttctttcccaccatgggaaagttgatcatgtccgttatattaaataaggaatatattcttatcatactctct 36626580  T
Q  116 caaccactagattatttttt 135  Q
    ||||||||||||||| ||||    
T  36626579 caaccactagattatatttt 36626560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 18 - 165
Target Start/End: Complemental strand, 687395 - 687247
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 117  Q
    |||||||||||||||||||||||||||| ||| |||| |||| ||||||||| |||| ||||||||||||||||||| | |||| |||||||||||||||    
T  687395 gtgccatttaatttgggaaaggagagttcttttccactatggaaaagttgattatgtccattagattaaatgaggaacatattcctatcatactctctca 687296  T
Q  118 accactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    | ||||| |||| ||||||| |||||||| ||| |||||||||||||||    
T  687295 atcactaaattatttttttatactatctttcacactctctctttcatgt 687247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 8040493 - 8040374
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||||||||||| | || ||||||||| |||||||||| ||||||| |||||||||||||  |||| | |||  |||||||||||||    
T  8040493 aggtgccatttaatttgggaaaggaaatttctttcccaccgtgggaaagttaatcatgtccattagattaaatagggaacatatttctatcatactctct 8040394  T
Q  116 caaccactagattatttttt 135  Q
    ||||||||||||||||||||    
T  8040393 caaccactagattatttttt 8040374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 47; E-Value: 6e-18
Query Start/End: Original strand, 178 - 240
Target Start/End: Original strand, 33002584 - 33002646
Alignment:
Q  178 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 240  Q
    ||||||||||||||||||||||||| ||||||||||||||| ||||||||||| |||| ||||    
T  33002584 tttgtttgatccttgaaaatggtacgctaacaagttttccggcagcaaccatggtggtgtgtg 33002646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 33284072 - 33283971
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||||||||||  |||||| |||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| ||||||||||||||    
T  33284072 aggtgccatttaatttgggaaaggttagttttatcccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacatttttatcatactctct 33283973  T
Q  116 ca 117  Q
    ||    
T  33283972 ca 33283971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 39950404 - 39950451
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||||    
T  39950404 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaag 39950451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 21 - 117
Target Start/End: Original strand, 33283169 - 33283265
Alignment:
Q  21 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 117  Q
    |||||||||||||||||||  |||||| ||||| |||||||||| |  |  ||  |||||||| |||||||||| ||||| ||||||||||||||||    
T  33283169 ccatttaatttgggaaaggttagttttatcccatcatgggaaaggtttttttgaccattagatcaaatgaggaacacatttttatcatactctctca 33283265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 17 - 64
Target Start/End: Original strand, 2319266 - 2319313
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    |||| ||||||||||||||||||  |||||||||||||||||||||||    
T  2319266 ggtggcatttaatttgggaaaggctagttttttcccaccatgggaaag 2319313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 23 - 66
Target Start/End: Original strand, 4607470 - 4607513
Alignment:
Q  23 atttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||| ||| |||||||||||||||||||||||    
T  4607470 atttaatttgggaaagtagacttttttcccaccatgggaaagtt 4607513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 17 - 119
Target Start/End: Complemental strand, 16971081 - 16970979
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||   |||||||||||| |||||||||||   |  |   ||||||||  ||||| ||||||| ||||||||||||| |||    
T  16971081 ggtgccatttaatttgggaaagactagttttttcccatcatgggaaagtaagttttaaccattagatctaatgaagaatacactcttatcatactccctc 16970982  T
Q  117 aac 119  Q
    |||    
T  16970981 aac 16970979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 4608638 - 4608589
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||| ||||||||||  ||| ||||||||||||||||||||    
T  4608638 ggtgccatttaatctgggaaaggaatgttatttcccaccatgggaaagtt 4608589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 13654932 - 13654981
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| ||||||||||||||||||||| || ||||||||||| |||||||    
T  13654932 aggtgacatttaatttgggaaaggagacttctttcccaccataggaaagt 13654981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 2320016 - 2319968
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| ||||||||||||||||||  |||||||||||||||| ||||||    
T  2320016 aggtggcatttaatttgggaaaggctagttttttcccaccataggaaag 2319968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 26268343 - 26268391
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| |||||||||||||||| |  |||||||||||||||||||||||    
T  26268343 aggtggcatttaatttgggaaatgttagttttttcccaccatgggaaag 26268391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 44 - 96
Target Start/End: Original strand, 33685772 - 33685824
Alignment:
Q  44 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaata 96  Q
    |||||||||||||||  ||||||||| |||| ||||||||||||||| |||||    
T  33685772 ttttttcccaccatgtaaaagttgattatgtccattagattaaatgaagaata 33685824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 53
Target Start/End: Complemental strand, 39950480 - 39950444
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttccca 53  Q
    ||||||||||||||||||||||||||||| |||||||    
T  39950480 ggtgccatttaatttgggaaaggagagttctttccca 39950444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 67
Target Start/End: Complemental strand, 13404752 - 13404701
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttg 67  Q
    ||||| ||||||||||||||| |||   ||||||||||||||||||||||||    
T  13404752 aggtggcatttaatttgggaacggactcttttttcccaccatgggaaagttg 13404701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 26269069 - 26269022
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    |||| ||||||||||||||||||  |||||||||||| ||||||||||    
T  26269069 ggtggcatttaatttgggaaaggttagttttttcccatcatgggaaag 26269022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 686701 - 686667
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  686701 ggtgccatttaatttgggaaaggagagttctttcc 686667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 2458403 - 2458353
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||| |||||||||||||| |||| |||||| ||||||||| ||||||    
T  2458403 aggtgccgtttaatttgggaaatgagactttttttccaccatggaaaagtt 2458353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 8226641 - 8226690
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||| ||||| ||| ||||||||| |||||| |||||    
T  8226641 aggtgccatttaatttgagaaagaagaattttttccctccatggaaaagt 8226690  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 31148493 - 31148444
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||| ||||||||||||||| | | |||||||||| ||||||||||||    
T  31148493 ggtgccgtttaatttgggaaagcacacttttttcccatcatgggaaagtt 31148444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 22 - 63
Target Start/End: Complemental strand, 39167483 - 39167442
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaa 63  Q
    ||||||||||||||||||||| || ||||||| |||||||||    
T  39167483 catttaatttgggaaaggagacttctttcccatcatgggaaa 39167442  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 76 - 156
Target Start/End: Original strand, 42518811 - 42518891
Alignment:
Q  76 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-ttttacactatcttccaccctctct 156  Q
    |||||||||||||||| || | ||||||||| |||| |||||| ||||| |||||| ||||| ||||| || ||||||||||    
T  42518811 cattagattaaatgagaaacaaattcttatcgtactatctcaa-cactaaattattgttttatactatttttcaccctctct 42518891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 26688166 - 26688214
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  26688166 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 26688214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 26957897 - 26957945
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  26957897 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 26957945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 121; Significance: 4e-62; HSPs: 71)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 39523319 - 39523164
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||| ||||||||||||||||||||||||  ||| |||||||||||    
T  39523319 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatgtccattagattaaatgaggaatacatctttaccatactctctc 39523220  T
Q  117 aaccactagattattttttacactatcttccaccctctctctttcatgttctcacac 173  Q
    || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||    
T  39523219 aa-cactaaattattttttacactatcttccaccctctctctttcatgttctcacac 39523164  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 111; E-Value: 4e-56
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 11417686 - 11417836
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  11417686 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 11417785  T
Q  116 caaccactagattat-tttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| |||||| |||||||| ||| |||||||||||||||    
T  11417786 caaccactagattatatttttatactatctttcacactctctctttcatgt 11417836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 26611332 - 26611182
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  26611332 aggtgtcatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 26611233  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||| ||||| ||||||||  || |||||||||||||||    
T  26611232 caaccactagattatttttttatactatcttttacactctctctttcatgt 26611182  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 10425108 - 10424958
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||| ||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||||| |||| |||||||||||||    
T  10425108 aggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaatatattcctatcatactctct 10425009  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||| ||||| | |||||| ||| |||||||||||||||    
T  10425008 caaccactagattatttttttatattatctttcacactctctctttcatgt 10424958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 21166424 - 21166274
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||| |||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  21166424 aggtgccatttaatttgagaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 21166325  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  21166324 caaccactagattatttttttatactatctttcacactctctctttcatgt 21166274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 165
Target Start/End: Complemental strand, 29651381 - 29651231
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |  |||||||||||||||||| | |||| |||||||||||||    
T  29651381 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctct 29651282  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  29651281 caaccactagattatttttttatactatctttcacactctctctttcatgt 29651231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 10424123 - 10424272
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||    
T  10424123 ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctc 10424222  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  10424223 aaccactagattatttttttatactatctttcacactctctctttcatgt 10424272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 21 - 173
Target Start/End: Complemental strand, 38143781 - 38143628
Alignment:
Q  21 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 120  Q
    ||||||||||||||||| ||||||| ||||||||||||||||||||| |||||| ||||||||||||||||||| | |||| ||||||||||||||||||    
T  38143781 ccatttaatttgggaaatgagagttctttcccaccatgggaaagttggtcatgtccattagattaaatgaggaacatattcctatcatactctctcaacc 38143682  T
Q  121 actagattatt-ttttacactatcttccaccctctctctttcatgttctcacac 173  Q
    ||||||||||| ||||| |||||||| ||| ||||||||||||||| |||||||    
T  38143681 actagattatttttttatactatctttcacactctctctttcatgtcctcacac 38143628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 102; E-Value: 9e-51
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 45230365 - 45230514
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||| |||||| ||||||| |||||||||||||||||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  45230365 ggtgccatttaattcgggaaaagagagttctttcccaccatgggaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 45230464  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  45230465 aaccactagattatttttttatactatctttcacactctctctttcatgt 45230514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 36865765 - 36865616
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  36865765 ggtgacatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 36865666  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| ||||||||  || |||||||||||||||    
T  36865665 aaccactagattatttttttatactatcttttacactctctctttcatgt 36865616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 11417985 - 11417867
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||| |||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  11417985 ggtgtcatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 11417886  T
Q  117 aaccactagattatttttt 135  Q
    |||||||||||||||||||    
T  11417885 aaccactagattatttttt 11417867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 26610350 - 26610495
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 121  Q
    |||||||||||||||| ||||||| ||||||||||||||||| |||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||    
T  26610350 catttaatttgggaaatgagagttctttcccaccatgggaaaattgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 26610449  T
Q  122 ctagatta--ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||  ||||||| |||||||| ||| |||||||||||||||    
T  26610450 ctagattattttttttatactatctttcacactctctctttcatgt 26610495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 38695002 - 38694850
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||| |||||||||||||||  |||||||||||||||||| | |||| ||||||||||||||    
T  38695002 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatgtctattagattaaatgaggaaaatattcatatcatactctctc 38694903  T
Q  117 aaccactagattatttttt---ac-actatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||||||   || |||||||| ||| |||||||||||||||    
T  38694902 aaccactagattatttttttatactactatctttcacactctctctttcatgt 38694850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 45236008 - 45235859
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||| ||||||||||| |||||||||||||||||||| ||||||| ||||||||||||||||||| | |||  ||||||| ||||||    
T  45236008 ggtgccatttaatttggaaaaggagagttctttcccaccatgggaaagttaatcatgtccattagattaaatgaggaacatatttctatcatattctctc 45235909  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  45235908 aaccactagattatttttttatactatctttcacactctctctttcatgt 45235859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 31836510 - 31836390
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 114  Q
    |||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  31836510 gaggtgccatttaatttgagaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctc 31836411  T
Q  115 tcaaccactagattatttttt 135  Q
    |||||||||||||||||||||    
T  31836410 tcaaccactagattatttttt 31836390  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 18 - 165
Target Start/End: Original strand, 29650416 - 29650564
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 117  Q
    |||||||||||||||||||| ||||||| ||| ||| | |||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||    
T  29650416 gtgccatttaatttgggaaatgagagttcttttccatcttgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctca 29650515  T
Q  118 accactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||| ||||||| |||||||| ||| |||||| ||||||||    
T  29650516 accactagattatttttttatactatctttcacactctctttttcatgt 29650564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 38694702 - 38694820
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  38694702 ggtgccatttaatttggaaaaggagagttctttcccagcatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 38694801  T
Q  117 aaccactagattatttttt 135  Q
    |||||||||||||||||||    
T  38694802 aaccactagattatttttt 38694820  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 21165447 - 21165596
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||| | |||| |||||||||||| ||||||||||||||| |||| |||||||||||||| | |||  ||||||||||||||    
T  21165447 ggtgccatttaatttgggaaagaatagttctttcccaccatgagaaagttgatcatgtccatttgattaaatgaggaacatatttctatcatactctctc 21165546  T
Q  117 aaccactagatt-attttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||| |||||||| |||||||| |||  ||||||||||||||    
T  21165547 aaccactagattaattttttatactatctttcacagtctctctttcatgt 21165596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 84; E-Value: 5e-40
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 9939420 - 9939301
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||| |||||| ||||| ||||||||||||| |||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  9939420 aggtgccatttaatttgagaaaggggagttctttcccaccatggaaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 9939321  T
Q  116 caaccactagattatttttt 135  Q
    ||||||||| ||||||||||    
T  9939320 caaccactatattatttttt 9939301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 39522374 - 39522524
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||| ||||||||||||||||||| |||| |||  ||||||||||||||||||||| | ||||||||||||||||||| | |||| |||||||||||||    
T  39522374 aggtgtcatttaatttgggaaaggatagttctttttcaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctct 39522473  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||| ||||||| |||||||| | | ||| |||||||||||    
T  39522474 caaccactagattatttttttatactatctttcgcactccctctttcatgt 39522524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 31835148 - 31835297
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||  |||| | |||| ||||||||||| ||||||||||| |||| |||||||||||| |||||| | |||| ||||||||||||||    
T  31835148 ggtgccatttaatttgaaaaagtatagttctttcccaccataggaaagttgattatgtccattagattaaacgaggaacatattcctatcatactctctc 31835247  T
Q  117 aaccactagattat-tttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||| |||||| |||||||| ||| |||||||||||||||    
T  31835248 aaccactagattatctttttatactatctttcacactctctctttcatgt 31835297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 82; E-Value: 8e-39
Query Start/End: Original strand, 18 - 135
Target Start/End: Original strand, 36864818 - 36864935
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctca 117  Q
    |||| ||||||||||||||||||||||| |||| ||||||| ||||||||||||||| |||||||||||||||| || | |||| |||||||||||||||    
T  36864818 gtgctatttaatttgggaaaggagagttctttctcaccatgagaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctctca 36864917  T
Q  118 accactagattatttttt 135  Q
    ||||||||||||||||||    
T  36864918 accactagattatttttt 36864935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 16 - 163
Target Start/End: Original strand, 9939124 - 9939269
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||| ||||||||||||||||| |||||| |||    | ||||||||||||||||||| |||||||||||||||| || | ||||||||||||||||||    
T  9939124 aggtgtcatttaatttgggaaagtagagttcttt---tctatgggaaagttgatcatgtccattagattaaatgagaaacatattcttatcatactctct 9939220  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcat 163  Q
    |||||||||||||| ||||||| |||||||| |||  ||||||||||||    
T  9939221 caaccactagattatttttttatactatctttcacattctctctttcat 9939269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 35 - 135
Target Start/End: Original strand, 38143506 - 38143606
Alignment:
Q  35 aaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttt 134  Q
    ||||||||||| ||| ||||||| |||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||||||||||||||||||||    
T  38143506 aaaggagagttcttttccaccataggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaaccactagattattttt 38143605  T
Q  135 t 135  Q
    |    
T  38143606 t 38143606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 67; E-Value: 7e-30
Query Start/End: Original strand, 31 - 165
Target Start/End: Original strand, 25970120 - 25970250
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 130  Q
    ||||||||| ||||| ||||||||||||||||||||||| |||| |||||||||||||||| || | ||  ||||||||||||||    |||||||||||    
T  25970120 tgggaaaggggagttgtttcccaccatgggaaagttgat-atgtccattagattaaatgagaaacaaatctttatcatactctct----cactagattat 25970214  T
Q  131 t-ttttacactatcttccaccctctctctttcatgt 165  Q
    | ||||||||||||||||||| ||||||||||||||    
T  25970215 tgttttacactatcttccaccatctctctttcatgt 25970250  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 36451461 - 36451327
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 130  Q
    ||||||||  ||||| |||| |||||||| ||||||||| |||| |||||||||||||||  || | || |||||| ||||||||||| |||||||||||    
T  36451461 tgggaaagaggagttgtttctcaccatggaaaagttgattatgtccattagattaaatgaaaaacaaatccttatcctactctctcaa-cactagattat 36451363  T
Q  131 t-ttttacactatcttccaccctctctctttcatgt 165  Q
    | ||||||||||||||||||| ||||||||||||||    
T  36451362 tgttttacactatcttccaccatctctctttcatgt 36451327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 55 - 173
Target Start/End: Original strand, 11806129 - 11806244
Alignment:
Q  55 catgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctct 154  Q
    |||||||||||| ||||||| ||||||||||||||||||| ||||| ||||| ||||||||||| |||||| |||||||||||| |||  | ||  ||||    
T  11806129 catgggaaagttaatcatgtccattagattaaatgaggaacacatttttatcctactctctcaa-cactagtttattttttacattattattca--ctct 11806225  T
Q  155 ctctttcatgttctcacac 173  Q
    |||||||||||||||||||    
T  11806226 ctctttcatgttctcacac 11806244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 34 - 165
Target Start/End: Original strand, 23383327 - 23383457
Alignment:
Q  34 gaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatttt 133  Q
    |||||||||||| |||||||||||||||||||| ||  | | |||| ||| |||||| ||| ||| |||||||||||||  ||||  ||||||||| |||    
T  23383327 gaaaggagagttgtttcccaccatgggaaagttaattttatccattcgatcaaatgaagaacacactcttatcatactccatcaat-actagattaattt 23383425  T
Q  134 ttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||||||||||||| |||||    
T  23383426 ttacactatcttccaccctctctcttccatgt 23383457  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 44 - 165
Target Start/End: Complemental strand, 17648165 - 17648044
Alignment:
Q  44 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-ttttacactat 142  Q
    |||||| |||| ||| |||||||||| || | ||||||||||||| || |||| ||||||||| ||||||||||| ||||| |||||| |||||||||||    
T  17648165 tttttttccactatgtgaaagttgattatatccattagattaaataagaaataaattcttatcttactctctcaa-cactatattattgttttacactat 17648067  T
Q  143 cttccaccctctctctttcatgt 165  Q
    |||||| ||||||||||||||||    
T  17648066 cttccatcctctctctttcatgt 17648044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 31 - 159
Target Start/End: Original strand, 36450742 - 36450871
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 130  Q
    ||||||||| ||||| ||| ||||||||||||||||||| |||| |||| ||||||||||| || | ||  ||||| ||||||||||  ||||||||| |    
T  36450742 tgggaaaggggagttgttttccaccatgggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctcatacactagattgt 36450841  T
Q  131 t-ttttacactatcttccaccctctctctt 159  Q
    | ||||||||||||||||||| ||||||||    
T  36450842 tgttttacactatcttccaccatctctctt 36450871  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 16 - 166
Target Start/End: Complemental strand, 25970852 - 25970701
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||| |||||| | ||||||| | ||||| |||||||||||| |||||||||| |||| ||||  |||||||||| || | ||  ||||| ||||||||    
T  25970852 aggtggcatttagtatgggaaaagggagttgtttcccaccatgagaaagttgattatgtccattgaattaaatgagtaacaaatctttatcctactctct 25970753  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcatgtt 166  Q
    ||  ||||||||| || ||||||||||||||||||| |||||||||| ||||    
T  25970752 catacactagattgttgttttacactatcttccaccatctctctttcttgtt 25970701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 15 - 66
Target Start/End: Complemental strand, 47377648 - 47377597
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||||||||||| ||||| ||||||||||||||||||||    
T  47377648 gaggtgccatttaatttgggaaaggggagttgtttcccaccatgggaaagtt 47377597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 178 - 240
Target Start/End: Complemental strand, 39522655 - 39522593
Alignment:
Q  178 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 240  Q
    ||||||||||||||||||||||||| |||||||||||| || ||||||||||| |||| ||||    
T  39522655 tttgtttgatccttgaaaatggtacgctaacaagtttttcggcagcaaccatggtggtgtgtg 39522593  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 17 - 109
Target Start/End: Original strand, 30808621 - 30808713
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcata 109  Q
    |||| |||||||  ||||||||||||||| |||||||||||||||||||| |   ||  ||||||||||| | | ||||||||||||||||||    
T  30808621 ggtggcatttaaaatgggaaaggagagttgtttcccaccatgggaaagttaaatttgaccattagattaagtaatgaatacattcttatcata 30808713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 40; E-Value: 0.00000000000009
Query Start/End: Original strand, 22 - 65
Target Start/End: Original strand, 3847891 - 3847934
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||| ||||||||||||||||||||||    
T  3847891 catttaatttgggaaaggagacttttttcccaccatgggaaagt 3847934  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 47198603 - 47198653
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  47198603 gaggtgacatttaatttgggaaaggagacttctttcccaccatgggaaagt 47198653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 42544487 - 42544536
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| ||| |||||||||||||||| |||||    
T  42544487 aggtgccatttaatttgggaaagaagacttttttcccaccatggaaaagt 42544536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Original strand, 47376852 - 47376905
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatc 70  Q
    |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  47376852 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc 47376905  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 117
Target Start/End: Complemental strand, 38014970 - 38014870
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||| ||||||||||||||||  ||||||| ||||||||||||||| |  |  ||  | |||||| |||||||||| ||||| | |||||||||||||    
T  38014970 ggtgccgtttaatttgggaaaggctagtttttccccaccatgggaaaggtttttttgaccgttagatcaaatgaggaacacattttaatcatactctctc 38014871  T
Q  117 a 117  Q
    |    
T  38014870 a 38014870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 22 - 65
Target Start/End: Complemental strand, 3848621 - 3848578
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||| || |||||||||||||||||||    
T  3848621 catttaatttgggaaaggagacttctttcccaccatgggaaagt 3848578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 11680283 - 11680325
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  11680283 tttaatttgggaaaggttagttttttcccaccatgggaaagtt 11680325  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 24 - 66
Target Start/End: Original strand, 11688562 - 11688604
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||  |||||||||||||||||||||||||    
T  11688562 tttaatttgggaaaggttagttttttcccaccatgggaaagtt 11688604  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 25370511 - 25370553
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  25370511 catttaatttgggaaaggctagttttttcccaccatgggaaag 25370553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 28684281 - 28684231
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||| ||||||||||||||||||||| |||||||| ||||| ||||||||    
T  28684281 aggtgacatttaatttgggaaaggagacttttttcctaccataggaaagtt 28684231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 37275088 - 37275137
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||| ||||||||||||||||||| || |||||||||||| |||||||    
T  37275088 ggtgccgtttaatttgggaaaggagacttctttcccaccatgagaaagtt 37275137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 46765218 - 46765169
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    |||||| |||||||||||||||||   |||||||||||||||||||||||    
T  46765218 gaggtggcatttaatttgggaaagactagttttttcccaccatgggaaag 46765169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 52757812 - 52757861
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| ||| ||||||||| |||| |||||||    
T  52757812 aggtgccatttaatttgggaaagaagacttttttccctccataggaaagt 52757861  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 76 - 146
Target Start/End: Original strand, 5825393 - 5825459
Alignment:
Q  76 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttc 146  Q
    |||||||| |||||||||| ||||| ||||| ||||||||||| ||||||   ||||||||||||||||||    
T  5825393 cattagatcaaatgaggaacacattattatcctactctctcaa-cactag---attttttacactatcttc 5825459  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 25371593 - 25371545
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||||||||||||||||| || |||||||||||| ||||||    
T  25371593 ggtgacatttaatttgggaaaggagacttctttcccaccatgagaaagt 25371545  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #50
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 16 - 118
Target Start/End: Original strand, 12589286 - 12589388
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtt-----cattagattaaatgaggaatacattcttatcatac 110  Q
    ||||| |||||||||||||||||   ||||||||||||| |||||||||     || |||     ||||||||||||||| |||||||||| ||||||||    
T  12589286 aggtgacatttaatttgggaaagattagttttttcccactatgggaaag-----caagtttcaaccattagattaaatgaagaatacattcatatcatac 12589380  T
Q  111 tctctcaa 118  Q
    || |||||    
T  12589381 tccctcaa 12589388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #51
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Original strand, 29651115 - 29651162
Alignment:
Q  193 aaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 240  Q
    ||||| |||| ||||||||||||||||||||||||||| |||| ||||    
T  29651115 aaaatcgtacgctaacaagttttccgacagcaaccatggtggtgtgtg 29651162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #52
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 14 - 65
Target Start/End: Original strand, 55159177 - 55159228
Alignment:
Q  14 ggaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||||  |||||||||||||||||||| || ||||| |||||||||||||    
T  55159177 ggaggtggtatttaatttgggaaaggagacttctttcctaccatgggaaagt 55159228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #53
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 10424419 - 10424385
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  10424419 ggtgccatttaatttgggaaaggagagttctttcc 10424385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #54
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 12590244 - 12590202
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||  |||||||| ||||||||||||||||    
T  12590244 tttaatttgggaaaggctagtttttttccaccatgggaaagtt 12590202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #55
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 21166137 - 21166171
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  21166137 ggtgccatttaatttgggaaaggagagttctttcc 21166171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #56
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 23425256 - 23425206
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||| |||||| | |||||| |||||||| ||||||||||||||||||||    
T  23425256 aggtggcatttagtatgggaatggagagttgtttcccaccatgggaaagtt 23425206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #57
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 25655680 - 25655638
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||   |||||||||||||||||||||||||    
T  25655680 tttaatttgggaaagactagttttttcccaccatgggaaagtt 25655638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #58
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 29650689 - 29650655
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  29650689 ggtgccatttaatttgggaaaggagagttctttcc 29650655  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #59
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 31836221 - 31836255
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  31836221 ggtgccatttaatttgggaaaggagagttctttcc 31836255  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #60
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 31910553 - 31910603
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||| |||||||||| |||||||   ||||||||||||||||||||||||    
T  31910553 aggtgtcatttaatttaggaaaggcttgttttttcccaccatgggaaagtt 31910603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #61
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 45235733 - 45235767
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  45235733 ggtgccatttaatttgggaaaggagagttctttcc 45235767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #62
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 30478308 - 30478357
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  30478308 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 30478357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #63
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 17 - 66
Target Start/End: Complemental strand, 42545611 - 42545562
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||||||||| | | |||||||||| ||| ||||||||    
T  42545611 ggtgccatttaatttgggaaagtacacttttttcccatcataggaaagtt 42545562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #64
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 47199444 - 47199395
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| |||||||||||||||| |||| || ||||||||||| |||||||    
T  47199444 aggtggcatttaatttgggaaaagagacttctttcccaccataggaaagt 47199395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #65
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 48013316 - 48013365
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  48013316 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 48013365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #66
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 55160115 - 55160067
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| |||||||||||||||||||||  |||||| ||||||||||||||    
T  55160115 aggtggcatttaatttgggaaaggaga-ctttttctcaccatgggaaagt 55160067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #67
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 11681323 - 11681275
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| |||||||||||| ||||   |||||||||||||||||||||||    
T  11681323 aggtggcatttaatttggaaaagactagttttttcccaccatgggaaag 11681275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #68
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 11689602 - 11689554
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| |||||||||||| ||||   |||||||||||||||||||||||    
T  11689602 aggtggcatttaatttggaaaagactagttttttcccaccatgggaaag 11689554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #69
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 100 - 148
Target Start/End: Complemental strand, 20822754 - 20822706
Alignment:
Q  100 tcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    ||||||| ||||||||  | ||||| |||||||||||||||||||||||    
T  20822754 tcttatcgtactctctttaacactatattattttttacactatcttcca 20822706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #70
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 61
Target Start/End: Complemental strand, 23865365 - 23865321
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatggga 61  Q
    |||||| ||||||||| ||||||||| || |||||||||||||||    
T  23865365 ggtgccgtttaatttgtgaaaggagacttgtttcccaccatggga 23865321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #71
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 18 - 66
Target Start/End: Complemental strand, 52758757 - 52758709
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||||||| |  ||||||||| || ||||||||||||    
T  52758757 gtgccatttaatttgggaaatgctagttttttctcatcatgggaaagtt 52758709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 116; Significance: 4e-59; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 116; E-Value: 4e-59
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 3542816 - 3542963
Alignment:
Q  19 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 118  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||| ||||||||||||||||    
T  3542816 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaacatattcctatcatactctctcaa 3542915  T
Q  119 ccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  3542916 ccactagattatttttttaaactatctttcacactctctctttcatgt 3542963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 114; E-Value: 6e-58
Query Start/End: Original strand, 17 - 173
Target Start/End: Complemental strand, 33480676 - 33480519
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  33480676 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 33480577  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgttctcacac 173  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||||||||| |||||    
T  33480576 aaccactagattatttttttatactatctttcacactctctctttcatgttcccacac 33480519  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 3543111 - 3542993
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  3543111 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 3543012  T
Q  117 aaccactagattatttttt 135  Q
    |||||||||||||||||||    
T  3543011 aaccactagattatttttt 3542993  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 15083366 - 15083217
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  15083366 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttgatcatatctattagattaaatgaggaacatattcctatcatactctctc 15083267  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  15083266 aaccactagattatttttttatactatctttcacactctctctttcatgt 15083217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 22579935 - 22580084
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||| |||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  22579935 ggtgccatttaatttgggaaaggagagttcttttccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 22580034  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    || |||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  22580035 aatcactagattatttttttatactatctttcacactctctctttcatgt 22580084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 33018167 - 33018316
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||||||| ||| |||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||||    
T  33018167 ggtgccatttaatttgggaaaggagagttctttcccatcattggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctctc 33018266  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||| ||||||| ||||||| |||||||| ||| |||||||||||||||    
T  33018267 aaccattagattatttttttatactatctttcacactctctctttcatgt 33018316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 19 - 165
Target Start/End: Original strand, 33479698 - 33479846
Alignment:
Q  19 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 118  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||||||    
T  33479698 tgccatttaatttgggaaaggagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctctcaa 33479797  T
Q  119 ccactagatta--ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||  ||||||| |||||||| ||| |||||| ||||||||    
T  33479798 ccactagattattttttttatactatctttcacactctctatttcatgt 33479846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 22 - 165
Target Start/End: Original strand, 15082402 - 15082546
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacca 121  Q
    |||||||||||||||| ||||||| ||| ||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||||||||    
T  15082402 catttaatttgggaaatgagagttcttttccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctcaacca 15082501  T
Q  122 ctagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||| ||||||| |||||||| ||| |||||||||||||||    
T  15082502 ctagattatttttttatactatctttcacactctctctttcatgt 15082546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 15 - 135
Target Start/End: Complemental strand, 33018466 - 33018346
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 114  Q
    |||||| | |||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||||||||||||    
T  33018466 gaggtgtcgtttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctatcatactctc 33018367  T
Q  115 tcaaccactagattatttttt 135  Q
    |||||||||||||||||||||    
T  33018366 tcaaccactagattatttttt 33018346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 87; E-Value: 8e-42
Query Start/End: Original strand, 16 - 155
Target Start/End: Original strand, 7193337 - 7193474
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | ||||||||||||||||||    
T  7193337 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatctccattagattaaatgaggaacatattcttatcatactctct 7193436  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctc 155  Q
    |||||   |||||| ||||||| |||||||| ||| |||||    
T  7193437 caacc---agattatttttttatactatctttcacactctc 7193474  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 21 - 161
Target Start/End: Complemental strand, 22587354 - 22587213
Alignment:
Q  21 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 120  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||| |||||| ||||| |    
T  22587354 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22587255  T
Q  121 actagattatt-ttttacactatcttccaccctctctctttc 161  Q
    ||||||||||| ||||| |||||||| ||| |||||||||||    
T  22587254 actagattatttttttatactatctttcacactctctctttc 22587213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 7193627 - 7193508
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    ||||||||||||||||| ||||| |||||| ||| ||| |||||||||||||||||| | ||||||||||||||||||||| |||  |||||||||||||    
T  7193627 aggtgccatttaatttgagaaagtagagttcttttccatcatgggaaagttgatcatatccattagattaaatgaggaatatatttctatcatactctct 7193528  T
Q  116 caaccactagattatttttt 135  Q
    ||||||||||||||||||||    
T  7193527 caaccactagattatttttt 7193508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 21 - 124
Target Start/End: Complemental strand, 22582523 - 22582420
Alignment:
Q  21 ccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaacc 120  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||  ||| |||||| ||||| |    
T  22582523 ccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatatttctattatactcactcaatc 22582424  T
Q  121 acta 124  Q
    ||||    
T  22582423 acta 22582420  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 24125972 - 24126021
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||| |||||||||||||||||| ||||| ||||||||||||||||||||    
T  24125972 ggtggcatttaatttgggaaaggggagttgtttcccaccatgggaaagtt 24126021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 17 - 70
Target Start/End: Complemental strand, 24126766 - 24126713
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatc 70  Q
    |||| |||||||||||||||||| ||||| ||||||| ||||||||||||||||    
T  24126766 ggtggcatttaatttgggaaaggggagttgtttcccatcatgggaaagttgatc 24126713  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 7159390 - 7159341
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| | | |||||||||| |||||||||||    
T  7159390 aggtgccatttaatttgggaaagcaaacttttttcccatcatgggaaagt 7159341  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 7531829 - 7531877
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||||||||||||||||| || ||||| |||||||||||||    
T  7531829 ggtggcatttaatttgggaaaggagacttctttcctaccatgggaaagt 7531877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 193 - 240
Target Start/End: Complemental strand, 22580200 - 22580153
Alignment:
Q  193 aaaatggtacactaacaagttttccgacagcaaccatgatggtctgtg 240  Q
    ||||| |||| ||||||||||||||| |||||||||||||||| ||||    
T  22580200 aaaatcgtacgctaacaagttttccggcagcaaccatgatggtgtgtg 22580153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 22 - 64
Target Start/End: Original strand, 10607406 - 10607448
Alignment:
Q  22 catttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    |||||||||||||||||   |||||||||||||||||||||||    
T  10607406 catttaatttgggaaagactagttttttcccaccatgggaaag 10607448  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 24 - 66
Target Start/End: Complemental strand, 10608361 - 10608319
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||   ||||||||||||||||||||||||    
T  10608361 tttaatttgggaaaggctggttttttcccaccatgggaaagtt 10608319  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 15 - 65
Target Start/End: Complemental strand, 14337607 - 14337557
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  14337607 gaggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 14337557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 15082672 - 15082638
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  15082672 ggtgccatttaatttgggaaaggagagttctttcc 15082638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 22580597 - 22580631
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  22580597 ggtgccatttaatttgggaaaggagagttctttcc 22580631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 22587083 - 22587117
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  22587083 ggtgccatttaatttgggaaaggagagttctttcc 22587117  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 33479972 - 33479938
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  33479972 ggtgccatttaatttgggaaaggagagttctttcc 33479938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 117
Target Start/End: Complemental strand, 1035452 - 1035351
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||| |||||  | |||||||||| |||||||||| |  |  ||  | |||||| ||||||| || ||||| | ||||||||||||    
T  1035452 aggtgccatttaatttggaaaaggttaattttttcccatcatgggaaagatttttttgaccgttagatcaaatgagaaacacattttaatcatactctct 1035353  T
Q  116 ca 117  Q
    ||    
T  1035352 ca 1035351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 7532489 - 7532440
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| ||||||||||||||||||||| || |||  ||||||||||||||    
T  7532489 aggtggcatttaatttgggaaaggagacttctttttcaccatgggaaagt 7532440  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 42 - 90
Target Start/End: Complemental strand, 4311211 - 4311163
Alignment:
Q  42 agttttttcccaccatgggaaagttgatcatgttcattagattaaatga 90  Q
    |||||||||||||||||||| ||||||| |||| |||| ||| ||||||    
T  4311211 agttttttcccaccatgggagagttgattatgtgcattggatcaaatga 4311163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 9574619 - 9574571
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||| ||||||||||||| || ||||||||||| |||||||    
T  9574619 ggtggcatttaacttgggaaaggagacttctttcccaccataggaaagt 9574571  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 31 - 119
Target Start/End: Complemental strand, 25067884 - 25067796
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaac 119  Q
    |||||||||| | || ||||||||||| ||||||||| |  ||| |||| ||| |||| || |||||| |||||| ||| |||||||||    
T  25067884 tgggaaaggatatttgtttcccaccataggaaagttgtttttgtccattggatcaaataagaaatacaatcttattatagtctctcaac 25067796  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0311 (Bit Score: 110; Significance: 2e-55; HSPs: 1)
Name: scaffold0311
Description:

Target: scaffold0311; HSP #1
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 15 - 165
Target Start/End: Complemental strand, 210 - 58
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 114  Q
    ||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| | |||| ||||||||||||    
T  210 gaggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgattatgttcattagattaaatgaggaacatattcctatcatactctc 111  T
Q  115 tcaaccactagattatt--ttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||||  ||||| |||||||| ||| |||||||||||||||    
T  110 tcaaccactagattattttttttatactatctttcacactctctctttcatgt 58  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 106; Significance: 4e-53; HSPs: 26)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 21472002 - 21471853
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||| | ||||||||||||||||||| | |||| ||||||||||||||    
T  21472002 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatatccattagattaaatgaggaacatattcctatcatactctctc 21471903  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  21471902 aaccactagattatttttttatactatctttcacactctctctttcatgt 21471853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 21471016 - 21471166
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||| ||| | |||| |||||||||||||    
T  21471016 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaagaacatattcctatcatactctct 21471115  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    || ||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  21471116 cagccactagattatttttttatactatctttcacactctctctttcatgt 21471166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 100; E-Value: 1e-49
Query Start/End: Original strand, 15 - 165
Target Start/End: Original strand, 38834385 - 38834536
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctc 114  Q
    ||||||||||||||||||||||||||| ||  |||||||||| ||||||||||||||||| ||||||||||||||||||| | ||| |||||||||||||    
T  38834385 gaggtgccatttaatttgggaaaggagggtactttcccaccacgggaaagttgatcatgtccattagattaaatgaggaacatatttttatcatactctc 38834484  T
Q  115 tcaaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  38834485 tcaaccactagattatttttttatactatctttcacactctctctttcatgt 38834536  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 96; E-Value: 3e-47
Query Start/End: Original strand, 16 - 135
Target Start/End: Original strand, 37547997 - 37548116
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||||||    
T  37547997 aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctct 37548096  T
Q  116 caaccactagattatttttt 135  Q
    ||||||||||||||||||||    
T  37548097 caaccactagattatttttt 37548116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 17 - 131
Target Start/End: Original strand, 14573261 - 14573374
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  14573261 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctc 14573360  T
Q  117 aaccactagattatt 131  Q
    || ||||||||||||    
T  14573361 aa-cactagattatt 14573374  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 4479750 - 4479603
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||| ||||||||||||||| ||||||| ||||||||||||||||||| | |||||||||||||||||||    
T  4479750 ggtgccatttaatttgggaaaggagagttctttctcaccatgggaaagttaatcatgtccattagattaaatgaggaacatattcttatcatactctctc 4479651  T
Q  117 aaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
     | ||||| ||||||||||| | |||||| || | ||||||||||||||    
T  4479650 ca-cactaaattattttttatattatctttcatcatctctctttcatgt 4479603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 38834685 - 38834566
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||||||||| ||| | |||  |||||||||||||    
T  38834685 aggtgccatttaatttgggaaaggagagttttttcctaccgtgggaaagttgatcatgtccattagattaaatgaagaacatatttctatcatactctct 38834586  T
Q  116 caaccactagattatttttt 135  Q
    ||||||||||||||||||||    
T  38834585 caaccactagattatttttt 38834566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 17 - 135
Target Start/End: Original strand, 13134318 - 13134436
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||| ||||| ||||||||||||| | |||  ||||||||||| ||    
T  13134318 ggtgccatttaatttgggaaaggagagttctttcccaccataggaaagttgatcatgtccattaaattaaatgaggaacatatttctatcatactctatc 13134417  T
Q  117 aaccactagattatttttt 135  Q
    |||||||||||||||||||    
T  13134418 aaccactagattatttttt 13134436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 16 - 134
Target Start/End: Complemental strand, 14574048 - 14573930
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| |||||||||||  ||||||||||||| | |||||||||||||||| || | |||| |||||||||||||    
T  14574048 aggtgccatttaatttgggaaaggagagttctttcccaccataagaaagttgatcatatccattagattaaatgagaaacatattcctatcatactctct 14573949  T
Q  116 caaccactagattattttt 134  Q
    ||||||||||||| |||||    
T  14573948 caaccactagattgttttt 14573930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 33433208 - 33433160
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||| ||||||||| |||||||||||| |||||||||||||||||||    
T  33433208 ggtgccgtttaatttgagaaaggagagttctttcccaccatgggaaagt 33433160  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 42 - 97
Target Start/End: Complemental strand, 30486964 - 30486909
Alignment:
Q  42 agttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatac 97  Q
    |||||||||||||||||||||||||||| |||| |||| ||| |||||| ||||||    
T  30486964 agttttttcccaccatgggaaagttgattatgtgcattggatcaaatgaagaatac 30486909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 35; E-Value: 0.00000000009
Query Start/End: Original strand, 15 - 65
Target Start/End: Original strand, 5276463 - 5276513
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  5276463 gaggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagt 5276513  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 53
Target Start/End: Complemental strand, 1164825 - 1164788
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttccca 53  Q
    |||||||||||||||||||||||||||||| |||||||    
T  1164825 aggtgccatttaatttgggaaaggagagttctttccca 1164788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 16426553 - 16426602
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||||||||||   ||||||||||||||||| ||||||    
T  16426553 ggtgccatttaatttgggaaaggcttgttttttcccaccatggaaaagtt 16426602  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 40992222 - 40992271
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||||||||||   ||||||||| ||||||||||||||    
T  40992222 ggtgccatttaatttgggaaaggtttgttttttcctaccatgggaaagtt 40992271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 16 - 64
Target Start/End: Original strand, 41984726 - 41984774
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| ||||||||||||||||||  ||||||||| |||||||||||||    
T  41984726 aggtggcatttaatttgggaaaggctagttttttctcaccatgggaaag 41984774  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 15 - 66
Target Start/End: Original strand, 2650227 - 2650278
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||| |||||||||||||| |||| |||||||||| ||||| ||||||    
T  2650227 gaggtgccgtttaatttgggaaatgagacttttttcccatcatggaaaagtt 2650278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 102 - 157
Target Start/End: Original strand, 4478936 - 4478990
Alignment:
Q  102 ttatcatactctctcaaccactagattattttttacactatcttccaccctctctc 157  Q
    ||||||||||||||| || |||||||||||||||| |||||||| || ||||||||    
T  4478936 ttatcatactctctccac-actagattattttttatactatctttcatcctctctc 4478990  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 11256766 - 11256696
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  11256766 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 11256696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 24727820 - 24727870
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||||||||| | | |||||||||| ||||| ||||||    
T  24727820 aggtgccatttaatttgggaaagcacacttttttcccatcatggaaaagtt 24727870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 59
Target Start/End: Complemental strand, 24741853 - 24741811
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgg 59  Q
    |||||| ||||||||||||||| ||| ||||||||||||||||    
T  24741853 ggtgccgtttaatttgggaaagaagacttttttcccaccatgg 24741811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 30545484 - 30545434
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||||||||||  |||| |||||||  |||||||||||    
T  30545484 aggtgccatttaatttgggaaagggaagttgtttcccatgatgggaaagtt 30545434  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 4478850 - 4478899
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  4478850 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 4478899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 19521966 - 19521917
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||||||||||||||||||||| | | || ||||||| |||||||||||    
T  19521966 aggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 19521917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 15 - 64
Target Start/End: Complemental strand, 41043378 - 41043329
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    |||||| ||||||||||||||||||  |||||||||||| ||||| ||||    
T  41043378 gaggtggcatttaatttgggaaaggctagttttttcccatcatggaaaag 41043329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 69
Target Start/End: Original strand, 30544727 - 30544779
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgat 69  Q
    ||||||||||||||||||||| |  |||| |||||||  ||||||||||||||    
T  30544727 ggtgccatttaatttgggaaatggaagttgtttcccatgatgggaaagttgat 30544779  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 106; Significance: 4e-53; HSPs: 53)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 106; E-Value: 4e-53
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 43737729 - 43737878
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||| |||||||||||||||    
T  43737729 ggtgccatttaatttgggaaagtagagttatttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatatttttatcatactctctc 43737828  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||| |||||||||||||||| |||  ||||||||| ||||    
T  43737829 aaccactagattatttttttacactatctttcacattctctctttgatgt 43737878  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 104; E-Value: 6e-52
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 16270207 - 16270357
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  16270207 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16270306  T
Q  117 aaccactagatta--ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||  ||||||| |||||||| ||| ||| |||||||||||    
T  16270307 aaccactagattattttttttatactatctttcacactccctctttcatgt 16270357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 103; E-Value: 2e-51
Query Start/End: Original strand, 17 - 135
Target Start/End: Complemental strand, 23440913 - 23440795
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| |||| ||||||||||||||    
T  23440913 ggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaatatattcctatcatactctctc 23440814  T
Q  117 aaccactagattatttttt 135  Q
    |||||||||||||||||||    
T  23440813 aaccactagattatttttt 23440795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 16 - 163
Target Start/End: Complemental strand, 48972494 - 48972346
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||| |||||||||||||| |||||||||||||||| || | |||| |||||||||||||    
T  48972494 aggtgccatttaatttgggaaaggagagttctttcccaccatggaaaagttgatcatgtccattagattaaatgagaaacatattcctatcatactctct 48972395  T
Q  116 caaccactagattatt-ttttacactatcttccaccctctctctttcat 163  Q
    |||||||||||||||| ||||| |||||||| ||| |||||||||||||    
T  48972394 caaccactagattatttttttatactatctttcacactctctctttcat 48972346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 98; E-Value: 2e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 9947995 - 9948144
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||||||| | |||| ||||||||||||| |||||||||||| ||||||||||||||||||||| | |||| ||||||||||||||    
T  9947995 ggtgccatttaatttgggaaagaaaagttctttcccaccatggaaaagttgatcatattcattagattaaatgaggaacatattcctatcatactctctc 9948094  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||| ||||||| |||||||| ||| |||||||||||||||    
T  9948095 aaccactagattatttttttatactatctttcacactctctctttcatgt 9948144  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 145
Target Start/End: Complemental strand, 9948935 - 9948807
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||| ||    
T  9948935 ggtgccatttaatttaggaaaggagagttctttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctatc 9948836  T
Q  117 aaccactagattattttttacactatctt 145  Q
    |||||||||||||||||||| ||||||||    
T  9948835 aaccactagattattttttatactatctt 9948807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 9e-48
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 23440617 - 23440765
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| ||||| || |||| ||||||||| |||| |||||||||||||||| || | |||| ||||||||||||||    
T  23440617 ggtgccatttaatttgggaaaggagagttctttccaactatggaaaagttgattatgtccattagattaaatgagaaacatattcctatcatactctctc 23440716  T
Q  117 aaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||||||||||||||| |||||||| ||| |||||||||||||||    
T  23440717 aaccactagattattttttatactatctttcacactctctctttcatgt 23440765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 95; E-Value: 1e-46
Query Start/End: Original strand, 16 - 165
Target Start/End: Original strand, 51974436 - 51974586
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||  |||||||||||||| ||| | |||| |||||||||||||    
T  51974436 aggtgccatttaatttgggaaaggagagttctttcccaccatgggaaagttgatcatgtctattagattaaatgaagaacatattcctatcatactctct 51974535  T
Q  116 caaccactagatta-ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||| ||||||||| ||||||| |||||||| |||  ||||||||||||||    
T  51974536 caactactagattatttttttatactatctttcacattctctctttcatgt 51974586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 94; E-Value: 5e-46
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 16271196 - 16271047
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||| ||||||||||||| |||| || |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||||||||||    
T  16271196 ggtgccatttaatttaggaaaggagagttctttctcatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatactctctc 16271097  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| ||||| || ||| |||||||||||||||    
T  16271096 aaccactagattatttttttatactatatttcacactctctctttcatgt 16271047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 31 - 173
Target Start/End: Original strand, 6075988 - 6076127
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 130  Q
    ||||||||||||||| ||| | |||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||| |||||||| ||||| |||||    
T  6075988 tgggaaaggagagttcttttctaccatgagaaagttgatcatgtccattagattaaatgaggaatacatttttatcatagtctctcaa-cactaaattat 6076086  T
Q  131 tttttacactatcttccaccctctctctttcatgttctcacac 173  Q
    ||||||||||||||||||  |||||||||||||||||||||||    
T  6076087 tttttacactatcttcca--ctctctctttcatgttctcacac 6076127  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 92; E-Value: 8e-45
Query Start/End: Original strand, 16 - 135
Target Start/End: Complemental strand, 43738027 - 43737908
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctct 115  Q
    |||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||| | |||| ||||||| |||||    
T  43738027 aggtgccatttaatttgggaaaggagagttctttcccatcatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatattctct 43737928  T
Q  116 caaccactagattatttttt 135  Q
    ||||||||||||||||||||    
T  43737927 caaccactagattatttttt 43737908  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 48971705 - 48971862
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||| |||||||||||||||||||||||| |||||||| ||| ||||||||||||| |  |||||||||||||||||| | |||| ||||||||||||||    
T  48971705 ggtgtcatttaatttgggaaaggagagttctttcccacaatgagaaagttgatcatataaattagattaaatgaggaacatattcctatcatactctctc 48971804  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 173  Q
    |||||||| |||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  48971805 aaccactatattatttttttatactatctttcacactctctctttcatgttcccacac 48971862  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 51975275 - 51975126
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||  ||| |||||||||||||||||||  |||||||||||||||||| | |||| |||||||||||||     
T  51975275 ggtgccatttaatttgggaaaggagagttctttttcactatgggaaagttgatcatgtcaattagattaaatgaggaacatattcctatcatactctctt 51975176  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||| ||||| |||||||| ||| |||||||||||||||    
T  51975175 aaccactagattatttttttatactatctttcacactctctctttcatgt 51975126  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 89; E-Value: 5e-43
Query Start/End: Original strand, 17 - 165
Target Start/End: Original strand, 193850 - 193997
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    ||||||||||||||||||||||||||||| |||||||||||| ||||||| ||||||| ||||| ||||||||||||| | |||||||||||||||||||    
T  193850 ggtgccatttaatttgggaaaggagagttctttcccaccatgagaaagttaatcatgtccattaaattaaatgaggaacatattcttatcatactctctc 193949  T
Q  117 aaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
     | ||||||||||||||||| | |||||| || | ||||||||||||||    
T  193950 ca-cactagattattttttatattatctttcatcatctctctttcatgt 193997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 17 - 163
Target Start/End: Complemental strand, 50827138 - 50826992
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||| || | ||| |||||||||||||||    
T  50827138 ggtgccatttaatttgagaaaggagagttttt-cccaccatgggaaagttgatcatgtccattagattaaatgagaaacatatttttatcatactctctc 50827040  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcat 163  Q
    |||||||| |||| ||||||| | |||||| ||| |||||||||||||    
T  50827039 aaccactaaattatttttttatagtatctttcacactctctctttcat 50826992  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 17 - 173
Target Start/End: Original strand, 38930312 - 38930469
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||| ||||||||||||||||||| |||| |||  ||||||||||||||||||||| | ||||| ||||||| ||||| | |||| ||||||||||||||    
T  38930312 ggtgtcatttaatttgggaaaggaaagttctttttcaccatgggaaagttgatcatatccattaaattaaataaggaacatattcctatcatactctctc 38930411  T
Q  117 aaccactagatta-ttttttacactatcttccaccctctctctttcatgttctcacac 173  Q
    ||||||||||||| ||||||| |||||||| ||| ||||||||||||||||| |||||    
T  38930412 aaccactagattatttttttatactatctttcacactctctctttcatgttcccacac 38930469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 12925897 - 12926020
Alignment:
Q  41 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 140  Q
    ||||||||| ||||||| | ||||||||| |||| |||||||||||||| |||||||||||||||  ||||||||||| || ||||||||||||||||||    
T  12925897 gagtttttttccaccatagaaaagttgataatgtccattagattaaatgtggaatacattcttatactactctctcaa-cattagattattttttacact 12925995  T
Q  141 atcttccaccctctctctttcatgt 165  Q
    |||||||||||||||||||||||||    
T  12925996 atcttccaccctctctctttcatgt 12926020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 79; E-Value: 5e-37
Query Start/End: Original strand, 31 - 165
Target Start/End: Complemental strand, 6076901 - 6076767
Alignment:
Q  31 tgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattat 130  Q
    ||||||| ||||||| |||||||| |||| |||||||||||||| ||||| |||||||||| || | |||| ||||||||||||||||||| ||||||||    
T  6076901 tgggaaatgagagttctttcccactatggaaaagttgatcatgtccattatattaaatgagtaacatattcctatcatactctctcaaccaatagattat 6076802  T
Q  131 tttttacactatcttccaccctctctctttcatgt 165  Q
    |||||| |||||||| ||| |||||||||||||||    
T  6076801 tttttatactatctttcacactctctctttcatgt 6076767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 41 - 165
Target Start/End: Original strand, 20794313 - 20794436
Alignment:
Q  41 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 140  Q
    ||||||||| ||||||| ||||||||||| |||| |||||||||||||| |||| ||||||||||   |||||||||| || ||||||||||||||||||    
T  20794313 gagtttttttccaccataggaaagttgataatgtgcattagattaaatgtggaacacattcttatatcactctctcaa-cattagattattttttacact 20794411  T
Q  141 atcttccaccctctctctttcatgt 165  Q
    || ||||||||||||||||||||||    
T  20794412 attttccaccctctctctttcatgt 20794436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 72; E-Value: 7e-33
Query Start/End: Original strand, 35 - 165
Target Start/End: Original strand, 47334217 - 47334347
Alignment:
Q  35 aaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattatt-tt 133  Q
    ||||| ||||| |||||||| |||||||||||||| |||| |||||||||||||||| || | || |||||| ||||||||||| |||||||||||| ||    
T  47334217 aaaggggagttgtttcccacaatgggaaagttgattatgtccattagattaaatgagaaacaaatccttatcctactctctcaa-cactagattattgtt 47334315  T
Q  134 ttacactatcttccaccctctctctttcatgt 165  Q
    ||||||||||||||||| ||||||||||||||    
T  47334316 ttacactatcttccaccatctctctttcatgt 47334347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 52 - 165
Target Start/End: Original strand, 17050488 - 17050600
Alignment:
Q  52 caccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccc 151  Q
    |||||||||||||||||| ||||||||||||||||||  || | ||||||||||  |||||||||||  | |||||||||||||||||||||||||||||    
T  17050488 caccatgggaaagttgataatgttcattagattaaatatggtacacattcttatactactctctcaat-attagattattttttacactatcttccaccc 17050586  T
Q  152 tctctctttcatgt 165  Q
    ||||||||||||||    
T  17050587 tctctctttcatgt 17050600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 41 - 165
Target Start/End: Complemental strand, 31390847 - 31390726
Alignment:
Q  41 gagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacact 140  Q
    ||||| ||||||||||||||||||||||| |||| |||| || ||||||||||| ||||| ||||| ||||||||||| || ||||||||||||||||||    
T  31390847 gagttctttcccaccatgggaaagttgattatgtccattggaataaatgaggaacacatttttatcctactctctcaa-cattagattattttttacact 31390749  T
Q  141 atcttccaccctctctctttcatgt 165  Q
    ||||| ||  |||||||||||||||    
T  31390748 atctttca--ctctctctttcatgt 31390726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 19 - 165
Target Start/End: Complemental strand, 38931293 - 38931145
Alignment:
Q  19 tgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaa 118  Q
    |||||||||||||||||||| |||||| ||| | |||||||||||||||||||| | ||||| ||||||| || || | |||  ||||||||||||||||    
T  38931293 tgccatttaatttgggaaagaagagttcttttctaccatgggaaagttgatcatatccattaaattaaataagaaacatatttctatcatactctctcaa 38931194  T
Q  119 ccactagatta--ttttttacactatcttccaccctctctctttcatgt 165  Q
    |||||| ||||  ||||||| | |||||| ||| |||||||||||||||    
T  38931193 ccactatattattttttttatattatctttcacactctctctttcatgt 38931145  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 17 - 166
Target Start/End: Complemental strand, 47334948 - 47334798
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||| |||||| | ||||||| | ||||| ||||||||||| ||||||||||| |||| |||| ||||||||||| || | ||  ||||| |||||||||    
T  47334948 ggtggcatttagtatgggaaaagggagttgtttcccaccataggaaagttgattatgtccattggattaaatgagtaacaaatctttatcctactctctc 47334849  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctctttcatgtt 166  Q
    |  ||||| ||  || ||||||||||||||||||| |||||||||| ||||    
T  47334848 atacactatatcgttgttttacactatcttccaccatctctctttcttgtt 47334798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 49; E-Value: 4e-19
Query Start/End: Original strand, 47 - 111
Target Start/End: Original strand, 27888701 - 27888765
Alignment:
Q  47 tttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatact 111  Q
    |||||||||||||||||||||||||||| ||||||||||||||||||| | |||| |||||||||    
T  27888701 tttcccaccatgggaaagttgatcatgtccattagattaaatgaggaacatattcctatcatact 27888765  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 44; E-Value: 4e-16
Query Start/End: Original strand, 178 - 229
Target Start/End: Original strand, 6076636 - 6076687
Alignment:
Q  178 tttgtttgatccttgaaaatggtacactaacaagttttccgacagcaaccat 229  Q
    |||||||||||||||||||||||||| |||||||||||||| ||||||||||    
T  6076636 tttgtttgatccttgaaaatggtacattaacaagttttccggcagcaaccat 6076687  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 16 - 66
Target Start/End: Original strand, 1012546 - 1012596
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||| ||||||||||||||||||| |||||||||||||||||||||||    
T  1012546 aggtgccgtttaatttgggaaaggagatttttttcccaccatgggaaagtt 1012596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 52 - 116
Target Start/End: Complemental strand, 40649580 - 40649516
Alignment:
Q  52 caccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||||||||||||||||| |||| |||||||||||||| |||| ||||||||||  |||||||||    
T  40649580 caccatgggaaagttgataatgtccattagattaaatgtggaacacattcttatactactctctc 40649516  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 51987826 - 51987875
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| ||||||||||||||||||||| || |||||||||||||||||||    
T  51987826 aggtggcatttaatttgggaaaggagacttctttcccaccatgggaaagt 51987875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 37; E-Value: 0.000000000006
Query Start/End: Original strand, 44 - 132
Target Start/End: Original strand, 46133720 - 46133807
Alignment:
Q  44 ttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattt 132  Q
    ||||| ||||||||||||||||  || |||| ||| ||||||||||||||  ||||||||||  ||||||||||| || ||||||||||    
T  46133720 tttttccccaccatgggaaagtgaattatgtccatcagattaaatgaggagcacattcttatactactctctcaa-cattagattattt 46133807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 76 - 165
Target Start/End: Original strand, 27418222 - 27418311
Alignment:
Q  76 cattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttccaccctctctctttcatgt 165  Q
    |||||||| |||||| ||  ||| |||| | |||||||||| | ||||| |||||||| ||||||||||||||   ||||||||||||||    
T  27418222 cattagatcaaatgaagagcacactcttgttatactctctcgaacactatattattttatacactatcttccataatctctctttcatgt 27418311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Complemental strand, 35616824 - 35616775
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    ||||| ||||||| ||||||||||||| || |||||||||||||||||||    
T  35616824 aggtggcatttaacttgggaaaggagacttctttcccaccatgggaaagt 35616775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 16 - 65
Target Start/End: Original strand, 45064685 - 45064734
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||||||||||||||||||||   |||||||||||| |||||||||||    
T  45064685 aggtgccatttaatttgggaaagattagttttttcccatcatgggaaagt 45064734  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 18 - 63
Target Start/End: Complemental strand, 49611607 - 49611562
Alignment:
Q  18 gtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 63  Q
    ||||||||||||||||||||||  |||||||||||| |||||||||    
T  49611607 gtgccatttaatttgggaaaggctagttttttcccatcatgggaaa 49611562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 8560839 - 8560887
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||||||||||||||||| || ||||||| |||||||||||    
T  8560839 ggtgacatttaatttgggaaaggagacttctttcccatcatgggaaagt 8560887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 49610706 - 49610754
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||||||| ||||||||||| ||| ||||||||| ||||||||||||    
T  49610706 ggtgccattttatttgggaaagaagacttttttccctccatgggaaagt 49610754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 51988512 - 51988464
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||||||||||||||||| || ||| |||||||||||||||    
T  51988512 ggtggcatttaatttgggaaaggagacttcttttccaccatgggaaagt 51988464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 7219068 - 7219138
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||||||| ||||| ||||||| ||| || |||||| ||||||||| || || |||||||||||||    
T  7219068 attagattaaatgaagaatatattcttaacatgctttctcaa-cactagatttttcttcacactatcttcca 7219138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Original strand, 51247888 - 51247958
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||| ||| ||||| ||||||| ||| |||||||||| |||||||| || || |||||||||||||    
T  51247888 attagattaagtgaagaatatattcttaacatgctctctcaac-actagatttttcttcacactatcttcca 51247958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 77 - 148
Target Start/End: Complemental strand, 51248509 - 51248439
Alignment:
Q  77 attagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||| ||| ||| | ||||||| ||||||||||||| ||||||||| || || |||||||||||||    
T  51248509 attagattaagtgaagaacatattcttaacatactctctcaa-cactagatttttcttcacactatcttcca 51248439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 1013521 - 1013471
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||| |||||||||||||||||||  ||| ||| ||||||||||||||||    
T  1013521 aggtgtcatttaatttgggaaaggaatgttattttccaccatgggaaagtt 1013471  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Original strand, 16270901 - 16270935
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  16270901 ggtgccatttaatttgggaaaggagagttctttcc 16270935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 17 - 51
Target Start/End: Complemental strand, 38930608 - 38930574
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcc 51  Q
    ||||||||||||||||||||||||||||| |||||    
T  38930608 ggtgccatttaatttgggaaaggagagttctttcc 38930574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 16 - 66
Target Start/End: Complemental strand, 45065435 - 45065385
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    |||||||||||||||||| ||| |   ||||||||||||||||||||||||    
T  45065435 aggtgccatttaatttggaaaaagcttgttttttcccaccatgggaaagtt 45065385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 23 - 65
Target Start/End: Complemental strand, 48870795 - 48870753
Alignment:
Q  23 atttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||| |||||||| |||| ||||||||||||||||||||||    
T  48870795 atttaacttgggaaatgagacttttttcccaccatgggaaagt 48870753  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.00000008
Query Start/End: Original strand, 75 - 148
Target Start/End: Original strand, 37725437 - 37725509
Alignment:
Q  75 tcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacactatcttcca 148  Q
    |||||||||||| ||| ||| | ||||||| ||||||||||||| ||||||||| || || ||||||| |||||    
T  37725437 tcattagattaagtgaagaacatattcttaacatactctctcaa-cactagatttttcttcacactattttcca 37725509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Complemental strand, 194749 - 194701
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||||||||||||||||||||| | | || ||||||| |||||||||||    
T  194749 ggtgccatttaatttgggaaagcaaacttctttcccatcatgggaaagt 194701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 64
Target Start/End: Complemental strand, 8561785 - 8561737
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||| |||||||||||||||||   |||||||||||| ||||||||||    
T  8561785 aggtgacatttaatttgggaaagactagttttttcccatcatgggaaag 8561737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 16 - 108
Target Start/End: Complemental strand, 11032268 - 11032176
Alignment:
Q  16 aggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcat 108  Q
    ||||| |||||||  ||||||||| || |  ||||||||||||||||||||||   ||  ||||||||||| | | ||| |||||||||||||    
T  11032268 aggtggcatttaacatgggaaaggggaatagtttcccaccatgggaaagttgaatttgaccattagattaagtaatgaacacattcttatcat 11032176  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Original strand, 14924681 - 14924721
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||||||||  |||| ||||||||||||||||||    
T  14924681 tttaatttgggaaagggaagttgtttcccaccatgggaaag 14924721  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 24 - 64
Target Start/End: Complemental strand, 14925383 - 14925343
Alignment:
Q  24 tttaatttgggaaaggagagttttttcccaccatgggaaag 64  Q
    ||||||||||| ||||| |||| ||||||||||||||||||    
T  14925383 tttaatttggggaaggaaagttgtttcccaccatgggaaag 14925343  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 17 - 65
Target Start/End: Original strand, 37874064 - 37874112
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagt 65  Q
    |||| ||||||| |||||||| |||| || |||||||||||||||||||    
T  37874064 ggtgacatttaacttgggaaatgagacttctttcccaccatgggaaagt 37874112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 15 - 63
Target Start/End: Original strand, 48869767 - 48869815
Alignment:
Q  15 gaggtgccatttaatttgggaaaggagagttttttcccaccatgggaaa 63  Q
    |||||| ||||||| ||||||||||||| || ||| |||||||||||||    
T  48869767 gaggtgacatttaacttgggaaaggagacttcttttccaccatgggaaa 48869815  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0332 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0332
Description:

Target: scaffold0332; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 17 - 160
Target Start/End: Complemental strand, 9306 - 9162
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctc 116  Q
    |||| |||||||||||| |||||||||||||||  |||||||| |||||| ||||||| ||||||||||||||| ||| | |||||||||||||||||||    
T  9306 ggtgtcatttaatttggaaaaggagagttttttttcaccatggaaaagttcatcatgtccattagattaaatgatgaacatattcttatcatactctctc 9207  T
Q  117 aaccactagattatt-ttttacactatcttccaccctctctcttt 160  Q
    ||||||||||||||| ||||| |||||||| ||| ||||||||||    
T  9206 aaccactagattatttttttatactatctttcacactctctcttt 9162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0700 (Bit Score: 39; Significance: 0.0000000000004; HSPs: 1)
Name: scaffold0700
Description:

Target: scaffold0700; HSP #1
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 42 - 156
Target Start/End: Original strand, 5344 - 5457
Alignment:
Q  42 agttttttcccaccatgggaaagttgatcatgttcattagattaaatgaggaatacattcttatcatactctctcaaccactagattattttttacacta 141  Q
    |||||| |||||| || ||||||| ||| || | |||||||||||||||| || ||||||||||| |||||| || |  ||||||||||||||||   ||    
T  5344 agttttctcccactataggaaagtagattatatccattagattaaatgagaaacacattcttatcctactctttcca-tactagattattttttatgata 5442  T
Q  142 tcttccaccctctct 156  Q
    |||||||| ||||||    
T  5443 tcttccacactctct 5457  T

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Target: scaffold0155 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0155
Description:

Target: scaffold0155; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 17 - 66
Target Start/End: Original strand, 17339 - 17388
Alignment:
Q  17 ggtgccatttaatttgggaaaggagagttttttcccaccatgggaaagtt 66  Q
    ||||||||||||||||| |||||   ||||||||||||||||||||||||    
T  17339 ggtgccatttaatttggaaaaggcttgttttttcccaccatgggaaagtt 17388  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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