View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4063_low_29 (Length: 238)
Name: NF4063_low_29
Description: NF4063
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4063_low_29 |
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Alignment Details
Target: chr5 (Bit Score: 227; Significance: 1e-125; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 227; E-Value: 1e-125
Query Start/End: Original strand, 1 - 227
Target Start/End: Complemental strand, 42671416 - 42671190
Alignment:
| Q |
1 |
ttttagtgatatattggagttgtaatctcacaatattgatacatattccataatactggattgattaataactatacatgttacttacaaacttctgagg |
100 |
Q |
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| T |
42671416 |
ttttagtgatatattggagttgtaatctcacaatattgatacatattccataatactggattgattaataactatacatgttacttacaaacttctgagg |
42671317 |
T |
|
| Q |
101 |
gttcagatatcttccatttctttccatcttagccccccagaaaatgaattaattaatgatgacataactacaacatttaatcgtatatcctacttgctcg |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
42671316 |
gttcagatatcttccatttctttccatcttagccccccagaaaatgaattaattaatgatgacataactacaacatttaatcgtatatcctacttgctcg |
42671217 |
T |
|
| Q |
201 |
atacgaatatagaacgaaaaatatgat |
227 |
Q |
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||||||||||||||||||||||||||| |
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| T |
42671216 |
atacgaatatagaacgaaaaatatgat |
42671190 |
T |
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