View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4064_high_19 (Length: 298)
Name: NF4064_high_19
Description: NF4064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4064_high_19 |
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Alignment Details
Target: chr3 (Bit Score: 267; Significance: 1e-149; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 267; E-Value: 1e-149
Query Start/End: Original strand, 6 - 284
Target Start/End: Original strand, 47778516 - 47778794
Alignment:
| Q |
6 |
agaagcatagggaagaaacccttatcaccagattcaagatctgaaacatcaccaccttttggaacaggtttaattttcttaaacttgatccaaaaacaac |
105 |
Q |
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| T |
47778516 |
agaaccatagggaagaaacccttatcaccagattcaagatctgaaacatcaccaccttttggaacaggtttaattttcttaaacttgatccaaaaacaac |
47778615 |
T |
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| Q |
106 |
ctaaacaaagaaccaatctatctatactctgaataagaaagagcacaatacaagcatttgtgagaaattgcaaaggaggagcaagatacccaacacgaat |
205 |
Q |
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| T |
47778616 |
ctaaacaaagaaccaatctatctatactctgaataagaaagagcacaatacaagcatttgtgagaaattgcaaaggaggagcaagatacccaacacgaat |
47778715 |
T |
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| Q |
206 |
caaaacccacctagcataaaaccaatcaaaaacatctctaacaccaaatgtcggtgcccacaattcaagatgtggagca |
284 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
47778716 |
taaaacccatctagcataaaaccaatcaaaaacatctctaacaccaaatgtcggtgcccacaattcaagatgtggagca |
47778794 |
T |
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