View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4064_low_18 (Length: 312)
Name: NF4064_low_18
Description: NF4064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4064_low_18 |
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Alignment Details
Target: chr5 (Bit Score: 260; Significance: 1e-145; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 260; E-Value: 1e-145
Query Start/End: Original strand, 1 - 293
Target Start/End: Original strand, 510563 - 510858
Alignment:
| Q |
1 |
tctagtggcatttttaattttgttccatacattttgaaatatata----ctgaaggcatgtgcaattttattttattaatttgaaataatattatagagg |
96 |
Q |
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| T |
510563 |
tctagtggcatttttaattttgttccatacattttgaaatatatatatactgaaggcatgtgcaattttattttattaatttgaaataatattatagagg |
510662 |
T |
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| Q |
97 |
aaaggaaaggaaaggaaacatatggaaaaaattgatttagtggtaggaatttaccaaacatatacacatgaaatatcacacatttcaattatgatgttat |
196 |
Q |
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| T |
510663 |
aaaggaaaggaaaggaaacatatggaaaa-attgatttagtggtaggaatttaccaaacatatacacatgaaatatcacacatttcaattatgatgttat |
510761 |
T |
|
| Q |
197 |
gagtattttgaaaataaatcattttatgtttgtcaatttcttccaatcatgaacggtctctgtttgatgtaacgtgaagagcagaggcagataaatg |
293 |
Q |
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|||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||||| |
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| T |
510762 |
gagtatttcgaaaataaatcattttatgtttgtcaatttcttccaatcatgaacggtctctgtttgatgtaacgtgaagagcagagactgataaatg |
510858 |
T |
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