View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4064_low_21 (Length: 285)
Name: NF4064_low_21
Description: NF4064
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4064_low_21 |
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Alignment Details
Target: chr7 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 18 - 270
Target Start/End: Complemental strand, 3749192 - 3748939
Alignment:
| Q |
18 |
ctgtgatctgtccagtgtatggaaactggtgatgaaatttttacacaactaaaatcaattatgattgacataaaaatttcaataggtggaatagtttcag |
117 |
Q |
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| T |
3749192 |
ctgtgatctgtccagtgtatggaaactggtgatgaaatttttacacaactaaaatcaattatgattgacataaaaatttcaataggtggaatagtttcag |
3749093 |
T |
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| Q |
118 |
caaaattgannnnnnnnnnnnnnnngaaaaaaccaaacgagcccatcaaaaaatgagtttaaggtaaaatgatt--tgtttgaatacattcaagtaaaat |
215 |
Q |
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| T |
3749092 |
caaaattgatttttcttttgtttttgaaaaaaccaaacgagcccatcaaaaaatgagttt-aggtaaaatgatttatgtttgaatacattcaagtaaaat |
3748994 |
T |
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| Q |
216 |
tgtaattgtaaatatcatgtttagaggcaagatcttcaaatgctaactgcatgtt |
270 |
Q |
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| T |
3748993 |
tgtaattgtatatatcatgttttgaggcaagatcttcaaatgctaactgcatgtt |
3748939 |
T |
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