View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4067_low_27 (Length: 242)
Name: NF4067_low_27
Description: NF4067
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4067_low_27 |
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Alignment Details
Target: chr3 (Bit Score: 200; Significance: 1e-109; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 200; E-Value: 1e-109
Query Start/End: Original strand, 12 - 223
Target Start/End: Original strand, 49737702 - 49737913
Alignment:
| Q |
12 |
cagagatgaccgtccctataaaggcagcatcagataactaggccgaccagaaaatacaatttcacatcacactaacaatgacagataaataaatatcaga |
111 |
Q |
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| T |
49737702 |
cagagatgaccgtccctataaagccagtatcagataactaggccgaccagaaaatacaatttcacatcgcactaacaatgacagataaataaatatcaga |
49737801 |
T |
|
| Q |
112 |
gacaccagaattccacaggttataaattttaagatatgtaataatgtatggacacacggtgtagatgatatatatagcagaaactaacttaacttacaag |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
49737802 |
gacaccagaattccacaggttataaattttaagatatgtaataatgtatggacacacggtgtagatgatatatatagcagaaactaacttaacttacaag |
49737901 |
T |
|
| Q |
212 |
gaacctgtcagt |
223 |
Q |
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|||||||||||| |
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| T |
49737902 |
gaacctgtcagt |
49737913 |
T |
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