View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4070_low_6 (Length: 355)

Name: NF4070_low_6
Description: NF4070
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4070_low_6
NF4070_low_6
[»] chr6 (5 HSPs)
chr6 (18-345)||(3884478-3884805)
chr6 (142-257)||(14771710-14771825)
chr6 (214-295)||(13191576-13191657)
chr6 (124-172)||(2681189-2681237)
chr6 (140-172)||(2720552-2720584)
[»] chr8 (8 HSPs)
chr8 (214-295)||(25147538-25147619)
chr8 (140-244)||(25148020-25148124)
chr8 (124-173)||(10729659-10729708)
chr8 (124-173)||(34308452-34308501)
chr8 (124-173)||(34308908-34308957)
chr8 (124-172)||(10844588-10844636)
chr8 (140-172)||(31283640-31283672)
chr8 (214-250)||(32292444-32292480)
[»] chr5 (1 HSPs)
chr5 (140-286)||(1821917-1822063)
[»] scaffold0022 (1 HSPs)
scaffold0022 (214-297)||(69878-69961)
[»] scaffold0071 (1 HSPs)
scaffold0071 (140-169)||(45164-45193)
[»] chr4 (7 HSPs)
chr4 (140-173)||(7678605-7678638)
chr4 (214-295)||(50399050-50399131)
chr4 (216-257)||(53391927-53391968)
chr4 (140-248)||(1645732-1645840)
chr4 (140-172)||(27029402-27029434)
chr4 (124-172)||(44471292-44471340)
chr4 (140-172)||(53996098-53996130)
[»] chr3 (6 HSPs)
chr3 (140-169)||(15381258-15381287)
chr3 (140-169)||(15392183-15392212)
chr3 (140-169)||(15396493-15396522)
chr3 (140-169)||(15410629-15410658)
chr3 (140-169)||(15417045-15417074)
chr3 (140-172)||(16811050-16811082)
[»] chr7 (1 HSPs)
chr7 (124-172)||(13122478-13122526)
[»] chr2 (1 HSPs)
chr2 (124-172)||(29804807-29804855)
[»] chr1 (4 HSPs)
chr1 (140-172)||(20060329-20060361)
chr1 (124-172)||(52250331-52250379)
chr1 (124-172)||(52250668-52250716)
chr1 (124-172)||(52251005-52251053)


Alignment Details
Target: chr6 (Bit Score: 276; Significance: 1e-154; HSPs: 5)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 276; E-Value: 1e-154
Query Start/End: Original strand, 18 - 345
Target Start/End: Original strand, 3884478 - 3884805
Alignment:
Q  18 atttgaagtattgttgattgatctataaaccaacacaaannnnnnnnagcgtgttttgctcctactctaacgatttttagaaaaccttataaaagatcat 117  Q
    ||||||||||||||||||||||||||||||||||||||         ||||||||||||| |||||||||||||||||||||||||||||||||| ||||    
T  3884478 atttgaagtattgttgattgatctataaaccaacacaatttttttttagcgtgttttgcttctactctaacgatttttagaaaaccttataaaaggtcat 3884577  T
Q  118 caatcgcaaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaatataccaccaaaaaagatatacatattgttgatattatcaagacca 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||||||||||||||||||||    
T  3884578 caatcgcaaaattgtttcaaaccaagcacacttaaatgtggagttcttatgaaatagaccacaaaaaaagatatacatattgttgatattatcaagacca 3884677  T
Q  218 aacaattcttattagcatttcttcaaccatgcaatctcattaccacacaatcttaggatctctctcattttgatgtgaattcgagtctttcatatgctta 317  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||    
T  3884678 aacaattcttattagcatttcttcaaccatgcaatctcattaccacacaatcttaggatctctctcattttgatgtgaattcgagtctttcatttgctta 3884777  T
Q  318 gaagcaactaggagccgctcattttcat 345  Q
    ||||||||||||||||||||||||||||    
T  3884778 gaagcaactaggagccgctcattttcat 3884805  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 142 - 257
Target Start/End: Original strand, 14771710 - 14771825
Alignment:
Q  142 agcacacttaaatgtggagttcttatggaatataccaccaaaaaagatatacatattgttgatattatcaagaccaaacaattcttattagcatttcttc 241  Q
    ||||||||||| |||||||||||||||||||| |  ||||||||  ||||  || ||||||||||    |  |||||||||||||||| ||  || ||||    
T  14771710 agcacacttaactgtggagttcttatggaatagattaccaaaaagaatatggatcttgttgatataggtagtaccaaacaattcttataagtcttccttc 14771809  T
Q  242 aaccatgcaatctcat 257  Q
    ||||||||| ||||||    
T  14771810 aaccatgcagtctcat 14771825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 13191576 - 13191657
Alignment:
Q  214 accaaacaattcttattagcatttcttcaaccatgcaatctcattaccacacaatcttaggatctctctcattttgatgtga 295  Q
    |||||||||||||||| ||| || ||||||||||||| || |||  | ||| | |||||||||| ||||||||  |||||||    
T  13191576 accaaacaattcttataagccttccttcaaccatgcagtcccatacctacatagtcttaggatccctctcattccgatgtga 13191657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 2681189 - 2681237
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||||| ||||  |||||| ||||| |||||||||||||||||||    
T  2681189 caaaattgttccaaattaagcacgcttaattgtggagttcttatggaat 2681237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 2720552 - 2720584
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaat 172  Q
    ||||||||||||| |||||||||||||||||||    
T  2720552 caagcacacttaactgtggagttcttatggaat 2720584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 42; Significance: 0.000000000000008; HSPs: 8)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 42; E-Value: 0.000000000000008
Query Start/End: Original strand, 214 - 295
Target Start/End: Complemental strand, 25147619 - 25147538
Alignment:
Q  214 accaaacaattcttattagcatttcttcaaccatgcaatctcattaccacacaatcttaggatctctctcattttgatgtga 295  Q
    |||||||||||||||| ||| || ||||||||||||| ||||||  | ||||| |||||||||||||||||||  |||||||    
T  25147619 accaaacaattcttataagccttccttcaaccatgcagtctcatacctacacagtcttaggatctctctcattccgatgtga 25147538  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 140 - 244
Target Start/End: Complemental strand, 25148124 - 25148020
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaatataccaccaaaaaagatatacatattgttgatattatcaagaccaaacaattcttattagcatttct 239  Q
    ||||||| ||||| |||||||||||||||||||   | ||| ||||  |||| ||| ||||||||||    ||||||||||||||||||| ||| || ||    
T  25148124 caagcacgcttaactgtggagttcttatggaatgagctaccgaaaagaatatgcatcttgttgatataggtaagaccaaacaattcttataagccttcct 25148025  T
Q  240 tcaac 244  Q
    |||||    
T  25148024 tcaac 25148020  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 10729659 - 10729708
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaata 173  Q
    |||||||| ||||| |||||||| ||||| |||||||| |||||||||||    
T  10729659 caaaattgcttcaagccaagcacccttaattgtggagtccttatggaata 10729708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 34308452 - 34308501
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaata 173  Q
    |||||||| | ||| |||||||| ||||| ||||||||||||||||||||    
T  34308452 caaaattgctccaagccaagcacgcttaagtgtggagttcttatggaata 34308501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 124 - 173
Target Start/End: Original strand, 34308908 - 34308957
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaata 173  Q
    |||||||| | ||| |||||||| ||||| ||||||||||||||||||||    
T  34308908 caaaattgctccaagccaagcacgcttaactgtggagttcttatggaata 34308957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 10844588 - 10844636
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||| |||||  ||||||| ||||| |||||||||||||||||||    
T  10844588 caaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaat 10844636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 31283640 - 31283672
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaat 172  Q
    ||||||||||||| |||||||||||||||||||    
T  31283640 caagcacacttaactgtggagttcttatggaat 31283672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 214 - 250
Target Start/End: Complemental strand, 32292480 - 32292444
Alignment:
Q  214 accaaacaattcttattagcatttcttcaaccatgca 250  Q
    |||||||||||||||| |||||| |||||||||||||    
T  32292480 accaaacaattcttataagcattccttcaaccatgca 32292444  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 39; Significance: 0.0000000000005; HSPs: 1)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 39; E-Value: 0.0000000000005
Query Start/End: Original strand, 140 - 286
Target Start/End: Complemental strand, 1822063 - 1821917
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaatataccaccaaaaaagatatacatattgttgatattatcaagaccaaacaattcttattagcatttct 239  Q
    ||||||| |||||||||||||||||||||||||   | ||||||||  | || ||| ||||||||||    |  |||||||||||||||| ||| || ||    
T  1822063 caagcacgcttaaatgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtagtaccaaacaattcttataagccttcct 1821964  T
Q  240 tcaaccatgcaatctcattaccacacaatcttaggatctctctcatt 286  Q
    ||||||||||| ||||||  |  ||| | |||| |||||||||||||    
T  1821963 tcaaccatgcagtctcatacctgcacgaccttaagatctctctcatt 1821917  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 32; Significance: 0.000000008; HSPs: 1)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 32; E-Value: 0.000000008
Query Start/End: Original strand, 214 - 297
Target Start/End: Original strand, 69878 - 69961
Alignment:
Q  214 accaaacaattcttattagcatttcttcaaccatgcaatctcattaccacacaatcttaggatctctctcattttgatgtgaat 297  Q
    ||||||||||| |||| |||||| ||||||| ||||| ||||||  |  || | |||||||||| |||||||| ||||||||||    
T  69878 accaaacaattattataagcattccttcaacgatgcagtctcatacctgcatagtcttaggatccctctcattatgatgtgaat 69961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0071 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0071
Description:

Target: scaffold0071; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 169
Target Start/End: Original strand, 45164 - 45193
Alignment:
Q  140 caagcacacttaaatgtggagttcttatgg 169  Q
    ||||||||||||||||||||||||||||||    
T  45164 caagcacacttaaatgtggagttcttatgg 45193  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 30; Significance: 0.0000001; HSPs: 7)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 173
Target Start/End: Original strand, 7678605 - 7678638
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaata 173  Q
    ||||||||||||| ||||||||||||||||||||    
T  7678605 caagcacacttaactgtggagttcttatggaata 7678638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 214 - 295
Target Start/End: Original strand, 50399050 - 50399131
Alignment:
Q  214 accaaacaattcttattagcatttcttcaaccatgcaatctcattaccacacaatcttaggatctctctcattttgatgtga 295  Q
    |||||||||||||||| ||| || ||||||||||| ||||||||  | ||||  ||| |||||| ||||||||  |||||||    
T  50399050 accaaacaattcttataagccttccttcaaccatgtaatctcatacctacacggtctcaggatccctctcattccgatgtga 50399131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 216 - 257
Target Start/End: Complemental strand, 53391968 - 53391927
Alignment:
Q  216 caaacaattcttattagcatttcttcaaccatgcaatctcat 257  Q
    ||||||||| |||| |||||||||||||||||||| ||||||    
T  53391968 caaacaatttttataagcatttcttcaaccatgcagtctcat 53391927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 248
Target Start/End: Original strand, 1645732 - 1645840
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaatataccaccaaaaaagatatacatattgttgatattatcaagaccaaacaattcttattagcatttct 239  Q
    ||||||| ||||| |||||||||||||||||||   | ||||||||  | || ||| ||||||||||    || |||||||||||||||| ||  || ||    
T  1645732 caagcacgcttaactgtggagttcttatggaatgggctaccaaaaagaagatgcatcttgttgatataggtaataccaaacaattcttataagtcttcct 1645831  T
Q  240 tcaaccatg 248  Q
    |||||||||    
T  1645832 tcaaccatg 1645840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 27029434 - 27029402
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaat 172  Q
    ||||||||||||| |||||||||||||||||||    
T  27029434 caagcacacttaactgtggagttcttatggaat 27029402  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 44471292 - 44471340
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||| | |||| ||||||| ||||| |||||||||||||||||||    
T  44471292 caaaattgctccaaatcaagcacgcttaactgtggagttcttatggaat 44471340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 53996098 - 53996130
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaat 172  Q
    ||||||||||||| |||||||||||||||||||    
T  53996098 caagcacacttaactgtggagttcttatggaat 53996130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 30; Significance: 0.0000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 15381287 - 15381258
Alignment:
Q  140 caagcacacttaaatgtggagttcttatgg 169  Q
    ||||||||||||||||||||||||||||||    
T  15381287 caagcacacttaaatgtggagttcttatgg 15381258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 15392212 - 15392183
Alignment:
Q  140 caagcacacttaaatgtggagttcttatgg 169  Q
    ||||||||||||||||||||||||||||||    
T  15392212 caagcacacttaaatgtggagttcttatgg 15392183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 15396522 - 15396493
Alignment:
Q  140 caagcacacttaaatgtggagttcttatgg 169  Q
    ||||||||||||||||||||||||||||||    
T  15396522 caagcacacttaaatgtggagttcttatgg 15396493  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 15410658 - 15410629
Alignment:
Q  140 caagcacacttaaatgtggagttcttatgg 169  Q
    ||||||||||||||||||||||||||||||    
T  15410658 caagcacacttaaatgtggagttcttatgg 15410629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 140 - 169
Target Start/End: Complemental strand, 15417074 - 15417045
Alignment:
Q  140 caagcacacttaaatgtggagttcttatgg 169  Q
    ||||||||||||||||||||||||||||||    
T  15417074 caagcacacttaaatgtggagttcttatgg 15417045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 172
Target Start/End: Complemental strand, 16811082 - 16811050
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||||||||||||| ||||||||||||||    
T  16811082 caagcacacttaaatgtgaagttcttatggaat 16811050  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Original strand, 13122478 - 13122526
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||| | |||| ||||||| ||||| |||||||||||||||||||    
T  13122478 caaaattgctccaaatcaagcacgcttaactgtggagttcttatggaat 13122526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 29; Significance: 0.0000005; HSPs: 1)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 29804855 - 29804807
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||| |||||  ||||||| ||||| |||||||||||||||||||    
T  29804855 caaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaat 29804807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 29; Significance: 0.0000005; HSPs: 4)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 140 - 172
Target Start/End: Original strand, 20060329 - 20060361
Alignment:
Q  140 caagcacacttaaatgtggagttcttatggaat 172  Q
    ||||||||||||| |||||||||||||||||||    
T  20060329 caagcacacttaactgtggagttcttatggaat 20060361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 52250379 - 52250331
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||| |||||  ||||||| ||||| |||||||||||||||||||    
T  52250379 caaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaat 52250331  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 52250716 - 52250668
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||| |||||  ||||||| ||||| |||||||||||||||||||    
T  52250716 caaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaat 52250668  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 29; E-Value: 0.0000005
Query Start/End: Original strand, 124 - 172
Target Start/End: Complemental strand, 52251053 - 52251005
Alignment:
Q  124 caaaattgtttcaaaccaagcacacttaaatgtggagttcttatggaat 172  Q
    |||||||| |||||  ||||||| ||||| |||||||||||||||||||    
T  52251053 caaaattgcttcaagtcaagcacgcttaactgtggagttcttatggaat 52251005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



© Oklahoma State University