View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4071_low_11 (Length: 249)
Name: NF4071_low_11
Description: NF4071
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4071_low_11 |
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Alignment Details
Target: chr7 (Bit Score: 177; Significance: 2e-95; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 1 - 226
Target Start/End: Complemental strand, 22356877 - 22356648
Alignment:
| Q |
1 |
ccaaatcaaataaattagtagtagttattgaaaacattagttaactacaaaatatttaaacaaatagtgttattaattagtcttaagcaaattaagcaat |
100 |
Q |
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| T |
22356877 |
ccaaatcaaataaattagtagcagttattgaaaacattagttaactacaaaatatttaaacaaatagtgttattaatcagtcttaagaaaattaagcaaa |
22356778 |
T |
|
| Q |
101 |
ttcattgtgagtgttttagatt----acctttgactcattaaatcatcatcaccttcattgtattatttccacttttgtatgttatagagtgtgatcaaa |
196 |
Q |
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||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||| |
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| T |
22356777 |
ttcattgtgagtgctttagattacctacctttgactcattaaatcatcatcaccttcattgtattatttccacttttgtatggtttagagtgtgatcaaa |
22356678 |
T |
|
| Q |
197 |
ttttgctacaaaaatagttcaactattgag |
226 |
Q |
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|||||| ||||||||||||||| ||||||| |
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| T |
22356677 |
ttttgccacaaaaatagttcaagtattgag |
22356648 |
T |
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