View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4072_high_23 (Length: 237)
Name: NF4072_high_23
Description: NF4072
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4072_high_23 |
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Alignment Details
Target: chr7 (Bit Score: 181; Significance: 6e-98; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 218
Target Start/End: Complemental strand, 29937915 - 29937690
Alignment:
| Q |
1 |
cgttataattcatatgcaattcatattcttatatatcacgtacaagatttagaaagaatactggtgagaccactagggagaatggtggtagtggcacttt |
100 |
Q |
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| T |
29937915 |
cgttatagttcatatgcaattcatattcttatatatcacgtacaagattaagaaagaatactggtgagaccactagggagaatggtgatagtggcacttt |
29937816 |
T |
|
| Q |
101 |
atatttattgtagttcactaacacaccaccaccaatacaatctttggtttccgaaaataattacttttgcaaaagcaggtt--------atgatcatcat |
192 |
Q |
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||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |
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| T |
29937815 |
atatttattgtagttcacttacacaccaccaccaatacaatctttggtttccgaaaataattacttttgcaaaagcaggttatgaacttatgatcatcat |
29937716 |
T |
|
| Q |
193 |
tgtttttggtttcattttaacaaaaa |
218 |
Q |
| |
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|||||||||||||||||||||||||| |
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| T |
29937715 |
tgtttttggtttcattttaacaaaaa |
29937690 |
T |
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