View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4073_high_20 (Length: 237)
Name: NF4073_high_20
Description: NF4073
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4073_high_20 |
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Alignment Details
Target: chr7 (Bit Score: 163; Significance: 3e-87; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 204
Target Start/End: Original strand, 25682693 - 25682898
Alignment:
| Q |
1 |
ttggcatacataatattattataaacttctagtatcatatatatcatcggagttcacttacaaataatattgaaagagacaaaa--aactcaaattcact |
98 |
Q |
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||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| |||||||||||||||||| |||||||||||||| |
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| T |
25682693 |
ttggcatacataatattattataaacttctagtatcatacatatcatcggagttcacttacaaattatattgaaagagacaaaaaaaactcaaattcact |
25682792 |
T |
|
| Q |
99 |
ttcaatacaatacatatcaccattatttcttattcttttgaagtctatagactatatatgtaactttatattgtcannnnnnnnaatatattatactatt |
198 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
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| T |
25682793 |
ttcaatacaatacatatcaccattatttcttattcttttgaagtctatagactatatatgtaactttatattgtcattttttttaatatattatactatt |
25682892 |
T |
|
| Q |
199 |
cattca |
204 |
Q |
| |
|
|||||| |
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| T |
25682893 |
cattca |
25682898 |
T |
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