View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4076_high_3 (Length: 446)

Name: NF4076_high_3
Description: NF4076
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4076_high_3
NF4076_high_3
[»] chr1 (8 HSPs)
chr1 (17-282)||(23922644-23922928)
chr1 (23-289)||(23915013-23915269)
chr1 (105-166)||(5253011-5253072)
chr1 (110-185)||(25803195-25803270)
chr1 (111-178)||(23989853-23989920)
chr1 (18-114)||(25803067-25803163)
chr1 (119-185)||(24436240-24436306)
chr1 (397-439)||(29523684-29523726)
[»] chr5 (5 HSPs)
chr5 (17-176)||(35079689-35079845)
chr5 (17-195)||(35074720-35074892)
chr5 (399-439)||(25032338-25032378)
chr5 (397-442)||(4219484-4219529)
chr5 (399-439)||(8176349-8176389)
[»] chr4 (5 HSPs)
chr4 (399-439)||(35394902-35394942)
chr4 (119-177)||(13435800-13435858)
chr4 (375-439)||(55961-56025)
chr4 (390-439)||(2215328-2215377)
chr4 (399-439)||(23540472-23540512)
[»] chr3 (6 HSPs)
chr3 (375-439)||(42601724-42601788)
chr3 (399-442)||(36178747-36178790)
chr3 (397-439)||(11908004-11908046)
chr3 (376-437)||(50033631-50033692)
chr3 (399-439)||(46572971-46573011)
chr3 (399-439)||(50415876-50415916)
[»] chr7 (5 HSPs)
chr7 (396-439)||(38970014-38970057)
chr7 (402-443)||(25218850-25218891)
chr7 (399-439)||(22191207-22191246)
chr7 (399-439)||(22737641-22737681)
chr7 (375-439)||(24793453-24793517)
[»] scaffold0012 (1 HSPs)
scaffold0012 (373-439)||(123975-124041)
[»] chr8 (6 HSPs)
chr8 (399-439)||(36912402-36912442)
chr8 (399-438)||(26632200-26632239)
chr8 (398-439)||(41477167-41477208)
chr8 (399-439)||(4625540-4625580)
chr8 (399-439)||(18029545-18029585)
chr8 (399-439)||(38584940-38584980)
[»] chr2 (3 HSPs)
chr2 (402-439)||(37245491-37245528)
chr2 (399-439)||(13151531-13151571)
chr2 (399-439)||(14152114-14152154)
[»] chr6 (1 HSPs)
chr6 (399-439)||(22627821-22627861)


Alignment Details
Target: chr1 (Bit Score: 182; Significance: 3e-98; HSPs: 8)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 182; E-Value: 3e-98
Query Start/End: Original strand, 17 - 282
Target Start/End: Original strand, 23922644 - 23922928
Alignment:
Q  17 aattttagggtaaacttctataagtttcaaacaacgttgttcaaagtctttttgaccaggtgctttgcatacattttggtacaacttggggct------t 110  Q
    |||||| |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||      |    
T  23922644 aattttggggtaagcttctataagtttcaaacaacgttgttcaaagtctttttgaccaggtgctttgcatacattttggtacaacttggggcttggtgct 23922743  T
Q  111 ggtgttggtgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaataggttgaatatgccattttctctttt------- 203  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||           
T  23922744 ggtgttggtgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaataggctgaagatgccattttctcttttgttaatt 23922843  T
Q  204 ------gacaatagacttagtttgttgttgaggagaatggagaataaacgttacttagggttcttaatttataggcattataatg 282  Q
          ||||||||||||| |||||||||||||||| ||||||| | ||||||||||||||||||||| ||||||||||||||||    
T  23922844 ataatggacaatagacttattttgttgttgaggagagtggagaagagacgttacttagggttcttaatatataggcattataatg 23922928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 23 - 289
Target Start/End: Original strand, 23915013 - 23915269
Alignment:
Q  23 agggtaaacttctataagtttcaaacaacgttgttcaaagtctttttgaccaggtgctttgcatacattttggtacaacttggggcttggtgttggtgtt 122  Q
    ||||||| ||||||| ||||| | ||| |||||||| |||||||| |||||||||  ||||||||||||||||||||||||| |||||||      ||||    
T  23915013 agggtaaccttctattagtttgagacagcgttgttcgaagtctttctgaccaggttgtttgcatacattttggtacaacttgaggcttgg------tgtt 23915106  T
Q  123 ggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaataggttgaatatgccattttctcttttgacaatagacttagtttgt 222  Q
    |||||| ||||||| |||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  23915107 ggtgaattggcatgggaaataaagatcattgaaatggtgagcaaaatggataaataggttgaagatgccattttctcttttgacaatagacttagtttgt 23915206  T
Q  223 tgttgaggagaatggagaataaacgttacttagggttcttaatttataggcattataatgcaatacc 289  Q
    ||||||||||||||||||||| |||    ||||||||||||||||||||||||||||||||| ||||    
T  23915207 tgttgaggagaatggagaatagacg----ttagggttcttaatttataggcattataatgcagtacc 23915269  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 105 - 166
Target Start/End: Complemental strand, 5253072 - 5253011
Alignment:
Q  105 gggcttggtgttggtgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaa 166  Q
    ||||| ||||||||||||||||||||||||||||||| | ||||||||||||||||||||||    
T  5253072 gggctaggtgttggtgttggtgaaatggcatgagaaatagagatcattgaaatggtgagcaa 5253011  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 110 - 185
Target Start/End: Original strand, 25803195 - 25803270
Alignment:
Q  110 tggtgttggtgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaataggttgaa 185  Q
    ||||| ||||||||||||||| |||||||||| ||| ||||||||||||||||||||||  |||||||| ||||||    
T  25803195 tggtgatggtgttggtgaaatagcatgagaaataaacatcattgaaatggtgagcaaaaatgataaatatgttgaa 25803270  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 111 - 178
Target Start/End: Complemental strand, 23989920 - 23989853
Alignment:
Q  111 ggtgttggtgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaata 178  Q
    ||||||||||||||||||||||||||||||| |||| ||||||| |||||||| || | |||||||||    
T  23989920 ggtgttggtgttggtgaaatggcatgagaaataaagttcattgagatggtgagtaacaaggataaata 23989853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 41; E-Value: 0.00000000000004
Query Start/End: Original strand, 18 - 114
Target Start/End: Original strand, 25803067 - 25803163
Alignment:
Q  18 attttagggtaaacttctataagtttcaaacaacgttgttcaaagtctttttgaccaggtgctttgcatacattttggtacaacttggggcttggtg 114  Q
    |||| |||||||  |||||| || ||||  ||||||||||| ||||||||||| || ||| |||| ||||| |||||||||||||| ||||||||||    
T  25803067 atttgagggtaagattctattagcttcaggcaacgttgttcgaagtctttttggccgggttctttacatacgttttggtacaacttagggcttggtg 25803163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 119 - 185
Target Start/End: Original strand, 24436240 - 24436306
Alignment:
Q  119 tgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaataggttgaa 185  Q
    ||||||||||||||| ||||||| |||||||||||| ||||||||||| | ||||| ||| ||||||    
T  24436240 tgttggtgaaatggcgtgagaaataaagatcattgatatggtgagcaataaggatagatatgttgaa 24436306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Original strand, 29523684 - 29523726
Alignment:
Q  397 ttttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||||||| |||||||||||| ||||||||| ||||||||    
T  29523684 ttttcaacacccttcaacacccactttttcaattcccaacact 29523726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 74; Significance: 9e-34; HSPs: 5)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 74; E-Value: 9e-34
Query Start/End: Original strand, 17 - 176
Target Start/End: Original strand, 35079689 - 35079845
Alignment:
Q  17 aattttagggtaaacttctataagtttcaaacaacgttgttcaaagtctttttgaccaggtgctttgcatacattttggtacaacttggggcttggtgtt 116  Q
    ||||||||||||| ||||||||||||| | |||||||||||| || ||||| |||| |||| |||| |||||| ||| ||||||||||||||||||||||    
T  35079689 aattttagggtaagcttctataagtttgagacaacgttgttcgaattctttctgacgaggttctttacatacacttttgtacaacttggggcttggtgtt 35079788  T
Q  117 ggtgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaa 176  Q
    ||   | ||||||||||||| |||| |||||||||||||||   |||||||| |||||||    
T  35079789 gg---tagtgaaatggcatgggaaataaagatcattgaaataacgagcaaaacggataaa 35079845  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 64; E-Value: 8e-28
Query Start/End: Original strand, 17 - 195
Target Start/End: Original strand, 35074720 - 35074892
Alignment:
Q  17 aattttagggtaaacttctataagtttcaaacaacgttgttcaaagtctttttgaccaggtgctttgcatacattttggtacaacttggggcttggtgtt 116  Q
    ||||| ||||||| ||||||||||||| | ||||||||||||||||||||||||||||| | ||||||||| |  || ||||||||| ||||      ||    
T  35074720 aatttgagggtaagcttctataagtttgagacaacgttgttcaaagtctttttgaccagattctttgcatatacgttcgtacaacttagggc------tt 35074813  T
Q  117 ggtgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaataggttgaatatgccattt 195  Q
    ||||||||||||| ||||||| ||| |||||||||||||||  |||  |||| |||||| || ||||||  ||||||||    
T  35074814 ggtgttggtgaaagggcatgacaaataaagatcattgaaataatgataaaaaaggataagtatgttgaaggtgccattt 35074892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 25032338 - 25032378
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||| ||| |||||||||||||||||||||||||||||||    
T  25032338 ttcaataccgttcaacacccaccttttcaatttccaacact 25032378  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 397 - 442
Target Start/End: Complemental strand, 4219529 - 4219484
Alignment:
Q  397 ttttcaacaccattcaacacccaccttttcaatttccaacacttca 442  Q
    ||||||| ||| |||||||||||| ||||||||| |||||||||||    
T  4219529 ttttcaatacccttcaacacccactttttcaattcccaacacttca 4219484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 8176389 - 8176349
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| |||||||||||||| ||||||||| ||||||||    
T  8176389 ttcaacatcattcaacacccactttttcaattcccaacact 8176349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 37; Significance: 0.00000000001; HSPs: 5)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 35394902 - 35394942
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    |||||||||||||||||| ||||||||||||||||||||||    
T  35394902 ttcaacaccattcaacacacaccttttcaatttccaacact 35394942  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 119 - 177
Target Start/End: Complemental strand, 13435858 - 13435800
Alignment:
Q  119 tgttggtgaaatggcatgagaaacaaagatcattgaaatggtgagcaaaatggataaat 177  Q
    |||| |||||||||| ||||||| |||||||||||| ||||||||||| | ||||||||    
T  13435858 tgttcgtgaaatggcgtgagaaataaagatcattgatatggtgagcaataaggataaat 13435800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 375 - 439
Target Start/End: Complemental strand, 56025 - 55961
Alignment:
Q  375 agaccatgtccaatgattttctttttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||||| ||||| |||| |  |||||||||||| ||||| ||| ||||||||||||||||||    
T  56025 agaccatgtacaatggttttttcattcaacaccattgaacactcactttttcaatttccaacact 55961  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 390 - 439
Target Start/End: Complemental strand, 2215377 - 2215328
Alignment:
Q  390 attttctttttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||| ||||| || |||||||||||||||| ||||||||| ||||||||    
T  2215377 atttttttttttaataccattcaacacccactttttcaattcccaacact 2215328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 23540512 - 23540472
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| | |||||||||||| ||||||||||||||||||    
T  23540512 ttcaacaaccttcaacacccactttttcaatttccaacact 23540472  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 37; Significance: 0.00000000001; HSPs: 6)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 375 - 439
Target Start/End: Original strand, 42601724 - 42601788
Alignment:
Q  375 agaccatgtccaatgattttctttttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| ||||||| ||||   ||||||||||||||||||||||| ||||||||| ||||||||    
T  42601724 agaccatctccaatggtttttcctttcaacaccattcaacacccactttttcaattcccaacact 42601788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 442
Target Start/End: Complemental strand, 36178790 - 36178747
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacacttca 442  Q
    ||||||||| |||||||||||| ||||||||| |||||||||||    
T  36178790 ttcaacacccttcaacacccactttttcaattcccaacacttca 36178747  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 397 - 439
Target Start/End: Original strand, 11908004 - 11908046
Alignment:
Q  397 ttttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| ||| |||||||||||| ||||||||||||||||||    
T  11908004 ttttcaatacccttcaacacccactttttcaatttccaacact 11908046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 376 - 437
Target Start/End: Original strand, 50033631 - 50033692
Alignment:
Q  376 gaccatgtccaatgattttctttttcaacaccattcaacacccaccttttcaatttccaaca 437  Q
    |||||| ||||||| |||||  ||| |||||||||||||| |||| |||| |||||||||||    
T  50033631 gaccatctccaatggttttcccttttaacaccattcaacatccacttttttaatttccaaca 50033692  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 46573011 - 46572971
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| |||||||||||||| ||||||||| ||||||||    
T  46573011 ttcaacaacattcaacacccactttttcaattcccaacact 46572971  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 50415916 - 50415876
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| | |||||||||||| ||||||||||||||||||    
T  50415916 ttcaacaaccttcaacacccactttttcaatttccaacact 50415876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 36; Significance: 0.00000000004; HSPs: 5)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 396 - 439
Target Start/End: Original strand, 38970014 - 38970057
Alignment:
Q  396 tttttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    |||||||||||| |||||||||||| ||||||||||||||||||    
T  38970014 tttttcaacacctttcaacacccactttttcaatttccaacact 38970057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 443
Target Start/End: Complemental strand, 25218891 - 25218850
Alignment:
Q  402 aacaccattcaacacccaccttttcaatttccaacacttcat 443  Q
    ||||||||| |||| |||| ||||||||||||||||||||||    
T  25218891 aacaccatttaacatccactttttcaatttccaacacttcat 25218850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 22191207 - 22191246
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||||||||||||| |||| ||||||||||||||||||    
T  22191207 ttcaacaccattcaaca-ccactttttcaatttccaacact 22191246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 22737681 - 22737641
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| |||||||||||||| ||||||||| ||||||||    
T  22737681 ttcaacagcattcaacacccactttttcaattcccaacact 22737641  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 375 - 439
Target Start/End: Original strand, 24793453 - 24793517
Alignment:
Q  375 agaccatgtccaatgattttctttttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||||| ||||| ||||   ||||||||||||||||||||| | ||||||| | ||||||||    
T  24793453 agaccatgttcaatggtttttcctttcaacaccattcaacaccccctttttcaagtcccaacact 24793517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0012 (Bit Score: 35; Significance: 0.0000000002; HSPs: 1)
Name: scaffold0012
Description:

Target: scaffold0012; HSP #1
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 373 - 439
Target Start/End: Original strand, 123975 - 124041
Alignment:
Q  373 ttagaccatgtccaatgattttctttttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||||| |  |||| |||| | |||||||||||||||||| |||| ||||||||||||||||||    
T  123975 ttagaccatctataatggttttttctttcaacaccattcaacatccactttttcaatttccaacact 124041  T

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Target: chr8 (Bit Score: 33; Significance: 0.000000003; HSPs: 6)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 36912402 - 36912442
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    |||||||||||||||||||||| ||||||||| ||||||||    
T  36912402 ttcaacaccattcaacacccactttttcaattcccaacact 36912442  T

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Target: chr8; HSP #2
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 399 - 438
Target Start/End: Complemental strand, 26632239 - 26632200
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacac 438  Q
    |||||||||||||||||||||| ||||||||| |||||||    
T  26632239 ttcaacaccattcaacacccactttttcaattcccaacac 26632200  T

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Target: chr8; HSP #3
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 398 - 439
Target Start/End: Original strand, 41477167 - 41477208
Alignment:
Q  398 tttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    |||||||||||||||||| |||| ||||||||| ||||||||    
T  41477167 tttcaacaccattcaacatccactttttcaattcccaacact 41477208  T

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Target: chr8; HSP #4
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 4625580 - 4625540
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    |||||||||||||||||| ||| ||||||||| ||||||||    
T  4625580 ttcaacaccattcaacactcactttttcaattcccaacact 4625540  T

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Target: chr8; HSP #5
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 18029585 - 18029545
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||||||||| |||||||| ||||||||| ||||||||    
T  18029585 ttcaacaccattcgacacccactttttcaattcccaacact 18029545  T

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Target: chr8; HSP #6
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 38584980 - 38584940
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    |||||||||||||||||| ||| ||||||||| ||||||||    
T  38584980 ttcaacaccattcaacacacactttttcaattcccaacact 38584940  T

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Target: chr2 (Bit Score: 30; Significance: 0.0000002; HSPs: 3)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 402 - 439
Target Start/End: Original strand, 37245491 - 37245528
Alignment:
Q  402 aacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||||||||||||||| ||||||||| ||||||||    
T  37245491 aacaccattcaacacccactttttcaattcccaacact 37245528  T

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Target: chr2; HSP #2
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 13151571 - 13151531
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| |||||||||||||| ||||||||| ||||||||    
T  13151571 ttcaacaacattcaacacccactttttcaattcccaacact 13151531  T

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Target: chr2; HSP #3
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Complemental strand, 14152154 - 14152114
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| |||||||||||||| ||||||||| ||||||||    
T  14152154 ttcaacaacattcaacacccactttttcaattcccaacact 14152114  T

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Target: chr6 (Bit Score: 29; Significance: 0.0000006; HSPs: 1)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 29; E-Value: 0.0000006
Query Start/End: Original strand, 399 - 439
Target Start/End: Original strand, 22627821 - 22627861
Alignment:
Q  399 ttcaacaccattcaacacccaccttttcaatttccaacact 439  Q
    ||||||| || ||||||||||| ||||||||||||||||||    
T  22627821 ttcaacaacactcaacacccacgttttcaatttccaacact 22627861  T

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