View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4078_high_6 (Length: 301)

Name: NF4078_high_6
Description: NF4078
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4078_high_6
NF4078_high_6
[»] chr5 (60 HSPs)
chr5 (17-295)||(29751338-29751615)
chr5 (1-295)||(10592955-10593248)
chr5 (1-295)||(25077818-25078110)
chr5 (1-295)||(25135787-25136079)
chr5 (1-289)||(16544106-16544393)
chr5 (1-289)||(16546328-16546615)
chr5 (1-289)||(40379790-40380076)
chr5 (1-289)||(40382001-40382287)
chr5 (151-295)||(29720211-29720354)
chr5 (1-281)||(18441840-18442120)
chr5 (151-295)||(29722371-29722514)
chr5 (12-187)||(24136184-24136359)
chr5 (1-163)||(43599043-43599205)
chr5 (1-163)||(43604535-43604697)
chr5 (1-163)||(43610027-43610189)
chr5 (113-278)||(22536482-22536647)
chr5 (1-281)||(9789416-9789696)
chr5 (1-164)||(27445291-27445454)
chr5 (1-164)||(27450134-27450297)
chr5 (1-164)||(43592597-43592760)
chr5 (13-281)||(26177592-26177859)
chr5 (13-281)||(26170483-26170750)
chr5 (17-165)||(35388021-35388169)
chr5 (1-164)||(31180573-31180737)
chr5 (151-281)||(16409322-16409451)
chr5 (1-181)||(1456750-1456932)
chr5 (1-107)||(22536633-22536740)
chr5 (1-82)||(29720078-29720161)
chr5 (168-281)||(13488060-13488171)
chr5 (168-281)||(36074244-36074355)
chr5 (1-174)||(15044994-15045168)
chr5 (168-281)||(13342918-13343029)
chr5 (168-281)||(25412619-25412730)
chr5 (12-146)||(38219770-38219905)
chr5 (1-66)||(29402662-29402728)
chr5 (11-69)||(30631767-30631825)
chr5 (1-69)||(2785781-2785850)
chr5 (168-281)||(28750855-28750966)
chr5 (168-281)||(30182446-30182557)
chr5 (1-69)||(33768590-33768659)
chr5 (1-69)||(33791722-33791791)
chr5 (168-281)||(39468749-39468860)
chr5 (1-66)||(29722265-29722332)
chr5 (168-281)||(533626-533737)
chr5 (1-126)||(9352920-9353046)
chr5 (168-281)||(30683120-30683231)
chr5 (1-69)||(37561059-37561128)
chr5 (168-281)||(13239609-13239720)
chr5 (1-69)||(28807188-28807257)
chr5 (195-280)||(31182857-31182940)
chr5 (168-281)||(32636681-32636792)
chr5 (1-69)||(37556237-37556306)
chr5 (168-281)||(42426435-42426546)
chr5 (168-281)||(42428630-42428741)
chr5 (18-82)||(16407772-16407836)
chr5 (18-82)||(16409208-16409272)
chr5 (195-281)||(5887616-5887700)
chr5 (112-222)||(16407848-16407957)
chr5 (195-281)||(33831564-33831648)
chr5 (17-126)||(36931952-36932061)
[»] chr7 (51 HSPs)
chr7 (1-295)||(24789539-24789831)
chr7 (11-289)||(1562187-1562464)
chr7 (1-289)||(6592523-6592809)
chr7 (1-289)||(6594741-6595025)
chr7 (1-289)||(18388943-18389232)
chr7 (1-289)||(18392379-18392668)
chr7 (1-165)||(2058329-2058493)
chr7 (1-295)||(20343612-20343887)
chr7 (1-295)||(32060503-32060776)
chr7 (12-187)||(1533028-1533203)
chr7 (91-281)||(39731158-39731345)
chr7 (11-254)||(25767180-25767422)
chr7 (12-165)||(21646365-21646518)
chr7 (112-295)||(43504333-43504514)
chr7 (1-106)||(20357140-20357246)
chr7 (112-281)||(48408605-48408771)
chr7 (1-150)||(12406595-12406745)
chr7 (12-164)||(12397229-12397381)
chr7 (1-174)||(4873435-4873609)
chr7 (168-281)||(4586018-4586129)
chr7 (16-126)||(18409159-18409270)
chr7 (1-69)||(24023931-24024000)
chr7 (168-281)||(24514960-24515071)
chr7 (168-281)||(29990912-29991023)
chr7 (12-165)||(18413997-18414150)
chr7 (12-106)||(21640205-21640299)
chr7 (168-281)||(4178632-4178743)
chr7 (1-69)||(24265789-24265858)
chr7 (168-281)||(30024932-30025043)
chr7 (13-82)||(43504526-43504595)
chr7 (1-174)||(31109183-31109357)
chr7 (151-281)||(48489270-48489399)
chr7 (18-105)||(39731064-39731153)
chr7 (168-281)||(1113514-1113625)
chr7 (1-69)||(21811851-21811920)
chr7 (12-69)||(24260945-24261002)
chr7 (168-281)||(35853772-35853883)
chr7 (195-281)||(38671422-38671506)
chr7 (183-281)||(43864116-43864212)
chr7 (183-281)||(47676336-47676432)
chr7 (111-187)||(21640143-21640220)
chr7 (168-281)||(23554897-23555008)
chr7 (120-179)||(20357240-20357298)
chr7 (183-281)||(14070033-14070129)
chr7 (183-281)||(14380061-14380157)
chr7 (12-69)||(16880479-16880536)
chr7 (12-69)||(16885334-16885391)
chr7 (168-281)||(18126501-18126612)
chr7 (168-281)||(19502035-19502146)
chr7 (168-281)||(31733169-31733280)
chr7 (16-80)||(48408527-48408591)
[»] chr1 (38 HSPs)
chr1 (1-301)||(20622410-20622708)
chr1 (17-295)||(9036132-9036407)
chr1 (1-289)||(44203330-44203617)
chr1 (11-295)||(9986909-9987192)
chr1 (1-283)||(21053652-21053936)
chr1 (1-295)||(40282071-40282367)
chr1 (1-187)||(24786937-24787124)
chr1 (1-163)||(24793759-24793921)
chr1 (17-166)||(24202360-24202509)
chr1 (112-281)||(51765197-51765363)
chr1 (1-182)||(41398547-41398729)
chr1 (1-182)||(41390892-41391074)
chr1 (168-281)||(20762529-20762640)
chr1 (168-259)||(3156723-3156812)
chr1 (183-281)||(13316518-13316614)
chr1 (1-69)||(1054626-1054695)
chr1 (1-69)||(44023489-44023558)
chr1 (12-165)||(19365893-19366046)
chr1 (12-107)||(19361037-19361134)
chr1 (18-80)||(51765121-51765183)
chr1 (168-281)||(3189188-3189299)
chr1 (168-281)||(3198005-3198116)
chr1 (168-281)||(3206844-3206955)
chr1 (168-281)||(10925080-10925191)
chr1 (1-69)||(25439511-25439580)
chr1 (168-281)||(28220426-28220537)
chr1 (168-281)||(28223621-28223732)
chr1 (168-281)||(37503754-37503865)
chr1 (1-69)||(39445901-39445970)
chr1 (151-281)||(44454999-44455128)
chr1 (183-281)||(31659110-31659206)
chr1 (1-69)||(25444704-25444773)
chr1 (12-69)||(43988073-43988130)
chr1 (195-281)||(197108-197192)
chr1 (195-281)||(834367-834451)
chr1 (195-281)||(3847321-3847405)
chr1 (168-281)||(1833379-1833490)
chr1 (168-256)||(49918206-49918292)
[»] chr3 (58 HSPs)
chr3 (1-295)||(54634822-54635115)
chr3 (1-295)||(6716197-6716490)
chr3 (1-295)||(6718381-6718674)
chr3 (1-295)||(45282678-45282973)
chr3 (1-289)||(25637125-25637412)
chr3 (1-295)||(3617146-3617439)
chr3 (1-289)||(4600928-4601216)
chr3 (1-289)||(4598707-4598995)
chr3 (17-289)||(10058157-10058425)
chr3 (17-289)||(10060379-10060647)
chr3 (17-289)||(10062601-10062869)
chr3 (17-289)||(10064823-10065091)
chr3 (17-289)||(10055935-10056203)
chr3 (17-289)||(10067045-10067313)
chr3 (1-289)||(10211090-10211379)
chr3 (1-163)||(8477729-8477890)
chr3 (1-281)||(23198137-23198417)
chr3 (1-187)||(8738635-8738822)
chr3 (1-187)||(9090873-9091060)
chr3 (1-281)||(23200336-23200616)
chr3 (1-165)||(27352193-27352357)
chr3 (1-165)||(40372368-40372532)
chr3 (1-165)||(7167606-7167770)
chr3 (1-187)||(28503431-28503619)
chr3 (17-246)||(7782375-7782603)
chr3 (1-107)||(2671177-2671284)
chr3 (1-187)||(28501264-28501452)
chr3 (111-289)||(10208982-10209159)
chr3 (1-295)||(800798-801081)
chr3 (168-281)||(5258344-5258455)
chr3 (177-281)||(9636326-9636429)
chr3 (1-280)||(37408149-37408426)
chr3 (91-174)||(22172884-22172967)
chr3 (1-126)||(22172774-22172899)
chr3 (168-281)||(5260523-5260634)
chr3 (1-106)||(10208890-10208997)
chr3 (12-124)||(1306366-1306479)
chr3 (1-173)||(24968419-24968592)
chr3 (1-69)||(8512646-8512715)
chr3 (1-69)||(8517526-8517595)
chr3 (18-126)||(32143707-32143816)
chr3 (12-74)||(32475885-32475947)
chr3 (12-74)||(32480743-32480805)
chr3 (183-281)||(45095037-45095133)
chr3 (12-69)||(2672543-2672600)
chr3 (12-69)||(18656847-18656904)
chr3 (183-281)||(5236656-5236752)
chr3 (195-281)||(39153561-39153645)
chr3 (12-69)||(2676699-2676756)
chr3 (168-281)||(40734355-40734466)
chr3 (168-260)||(29812920-29813010)
chr3 (189-260)||(7762144-7762213)
chr3 (195-281)||(9581167-9581251)
chr3 (195-281)||(19684089-19684173)
chr3 (183-281)||(29810740-29810836)
chr3 (195-277)||(32744630-32744710)
chr3 (183-281)||(40735255-40735351)
chr3 (168-281)||(51398671-51398782)
[»] chr8 (46 HSPs)
chr8 (1-295)||(25689653-25689945)
chr8 (1-295)||(3439200-3439494)
chr8 (17-289)||(42575508-42575779)
chr8 (1-187)||(4759646-4759833)
chr8 (1-187)||(18852739-18852926)
chr8 (1-187)||(30655983-30656170)
chr8 (12-187)||(1261539-1261716)
chr8 (1-163)||(36979741-36979902)
chr8 (11-295)||(2627442-2627725)
chr8 (1-187)||(18870133-18870320)
chr8 (189-289)||(15290410-15290508)
chr8 (189-289)||(15470779-15470877)
chr8 (12-187)||(7289552-7289728)
chr8 (1-187)||(10688711-10688899)
chr8 (1-164)||(6311659-6311823)
chr8 (168-281)||(17982510-17982621)
chr8 (1-69)||(10683851-10683920)
chr8 (3-174)||(25327778-25327950)
chr8 (168-281)||(31218114-31218225)
chr8 (12-165)||(26288239-26288392)
chr8 (12-165)||(26301496-26301649)
chr8 (12-165)||(26313490-26313643)
chr8 (168-260)||(34254549-34254639)
chr8 (12-106)||(33037411-33037505)
chr8 (168-281)||(1746418-1746529)
chr8 (168-281)||(12702838-12702949)
chr8 (168-281)||(15212643-15212754)
chr8 (17-106)||(15290273-15290362)
chr8 (17-106)||(15470642-15470731)
chr8 (168-277)||(30143199-30143306)
chr8 (168-281)||(33352007-33352118)
chr8 (168-281)||(34256705-34256815)
chr8 (1-69)||(35745797-35745866)
chr8 (168-281)||(43036280-43036391)
chr8 (1-174)||(39784437-39784611)
chr8 (17-124)||(31043017-31043125)
chr8 (168-281)||(19945560-19945671)
chr8 (168-281)||(27811135-27811246)
chr8 (111-187)||(33037490-33037567)
chr8 (168-281)||(42498051-42498162)
chr8 (168-281)||(44303711-44303822)
chr8 (168-281)||(4733664-4733777)
chr8 (168-247)||(19948554-19948632)
chr8 (168-281)||(4731515-4731626)
chr8 (195-281)||(6598856-6598940)
chr8 (195-281)||(6674309-6674393)
[»] chr6 (49 HSPs)
chr6 (2-295)||(16554567-16554859)
chr6 (2-295)||(16631123-16631415)
chr6 (1-295)||(16578696-16578989)
chr6 (1-295)||(16616391-16616684)
chr6 (1-295)||(16652809-16653102)
chr6 (17-295)||(25421020-25421295)
chr6 (1-289)||(6026946-6027232)
chr6 (1-289)||(33342289-33342576)
chr6 (17-289)||(34166796-34167064)
chr6 (17-289)||(34164574-34164842)
chr6 (113-289)||(27647673-27647847)
chr6 (15-295)||(3072938-3073215)
chr6 (12-187)||(5674354-5674529)
chr6 (1-295)||(411798-412091)
chr6 (112-281)||(2171730-2171897)
chr6 (112-281)||(6097632-6097800)
chr6 (1-125)||(25420909-25421034)
chr6 (1-164)||(11857292-11857455)
chr6 (1-127)||(6136308-6136435)
chr6 (1-80)||(5266480-5266560)
chr6 (1-174)||(22010301-22010475)
chr6 (168-281)||(31404873-31404985)
chr6 (1-164)||(16839054-16839218)
chr6 (12-126)||(22709405-22709520)
chr6 (1-62)||(27647580-27647642)
chr6 (17-106)||(13150979-13151068)
chr6 (1-164)||(14737178-14737342)
chr6 (168-279)||(30834738-30834847)
chr6 (168-281)||(5406398-5406509)
chr6 (168-281)||(5410723-5410834)
chr6 (1-69)||(6005825-6005894)
chr6 (1-69)||(6438902-6438971)
chr6 (168-281)||(9183231-9183342)
chr6 (1-164)||(14742038-14742202)
chr6 (168-281)||(16452529-16452640)
chr6 (1-69)||(33330045-33330114)
chr6 (1-69)||(33335542-33335611)
chr6 (12-80)||(2171911-2171979)
chr6 (1-55)||(30125130-30125185)
chr6 (1-173)||(28155183-28155356)
chr6 (12-69)||(5343883-5343940)
chr6 (168-277)||(5413596-5413703)
chr6 (17-82)||(6097812-6097877)
chr6 (17-126)||(26253698-26253808)
chr6 (111-162)||(5266418-5266469)
chr6 (170-281)||(33211385-33211494)
chr6 (168-281)||(33160553-33160665)
chr6 (91-126)||(14737174-14737210)
chr6 (91-126)||(14742034-14742070)
[»] scaffold0137 (1 HSPs)
scaffold0137 (17-289)||(5989-6258)
[»] chr4 (41 HSPs)
chr4 (1-295)||(7122379-7122672)
chr4 (1-289)||(8393094-8393380)
chr4 (5-289)||(8395307-8395589)
chr4 (17-289)||(5135779-5136049)
chr4 (17-289)||(5138005-5138274)
chr4 (11-281)||(13992485-13992755)
chr4 (1-295)||(31495495-31495789)
chr4 (1-187)||(24742278-24742465)
chr4 (1-164)||(51520775-51520938)
chr4 (189-295)||(7124787-7124891)
chr4 (1-173)||(56141624-56141797)
chr4 (1-107)||(29761039-29761146)
chr4 (1-174)||(9228798-9228972)
chr4 (1-174)||(18712367-18712541)
chr4 (1-69)||(7124601-7124670)
chr4 (1-174)||(9224011-9224185)
chr4 (12-126)||(28468102-28468217)
chr4 (1-69)||(3814425-3814493)
chr4 (169-281)||(5429537-5429647)
chr4 (168-281)||(30000005-30000116)
chr4 (1-69)||(45347429-45347498)
chr4 (1-69)||(45356910-45356979)
chr4 (168-281)||(52082857-52082968)
chr4 (183-281)||(48142914-48143010)
chr4 (12-69)||(5733065-5733122)
chr4 (168-281)||(9927657-9927768)
chr4 (12-69)||(18856128-18856185)
chr4 (168-281)||(34570614-34570725)
chr4 (168-281)||(37740483-37740594)
chr4 (168-281)||(52095562-52095673)
chr4 (168-281)||(56178836-56178947)
chr4 (168-260)||(52093885-52093975)
chr4 (183-280)||(12739751-12739846)
chr4 (183-280)||(12747957-12748052)
chr4 (168-281)||(26175836-26175947)
chr4 (168-277)||(54200110-54200217)
chr4 (17-126)||(31985236-31985346)
chr4 (111-174)||(3814320-3814383)
chr4 (195-281)||(5871704-5871788)
chr4 (195-281)||(13009631-13009715)
chr4 (111-165)||(29761001-29761055)
[»] scaffold0565 (1 HSPs)
scaffold0565 (1-289)||(2787-3073)
[»] chr2 (32 HSPs)
chr2 (1-289)||(12647569-12647855)
chr2 (1-295)||(6266387-6266681)
chr2 (18-281)||(4484530-4484792)
chr2 (1-187)||(9295974-9296161)
chr2 (1-165)||(14291849-14292013)
chr2 (12-277)||(30833046-30833310)
chr2 (1-165)||(11098499-11098663)
chr2 (18-281)||(32289279-32289541)
chr2 (12-122)||(25410030-25410141)
chr2 (168-281)||(4503332-4503443)
chr2 (168-281)||(36205863-36205974)
chr2 (12-165)||(3492099-3492252)
chr2 (168-281)||(36988275-36988386)
chr2 (168-281)||(39284742-39284853)
chr2 (168-281)||(45099612-45099723)
chr2 (1-174)||(39811589-39811763)
chr2 (168-281)||(5723454-5723565)
chr2 (3-69)||(19344828-19344895)
chr2 (168-282)||(38312097-38312209)
chr2 (168-281)||(2334617-2334728)
chr2 (1-69)||(19349686-19349755)
chr2 (195-281)||(11151791-11151875)
chr2 (11-126)||(28258774-28258889)
chr2 (195-281)||(42362236-42362320)
chr2 (168-211)||(2837112-2837155)
chr2 (22-126)||(40739217-40739322)
chr2 (195-281)||(723944-724028)
chr2 (195-281)||(11690385-11690469)
chr2 (168-257)||(6595230-6595317)
chr2 (168-281)||(17057569-17057680)
chr2 (168-281)||(17085552-17085663)
chr2 (17-69)||(32247192-32247244)
[»] scaffold0674 (1 HSPs)
scaffold0674 (1-289)||(3909-4198)
[»] scaffold0491 (3 HSPs)
scaffold0491 (1-281)||(11361-11640)
scaffold0491 (112-281)||(8935-9102)
scaffold0491 (9-82)||(9114-9187)
[»] scaffold0286 (2 HSPs)
scaffold0286 (112-254)||(22146-22286)
scaffold0286 (12-80)||(22064-22132)
[»] scaffold1519 (1 HSPs)
scaffold1519 (18-281)||(613-885)
[»] scaffold0002 (1 HSPs)
scaffold0002 (168-281)||(434390-434501)
[»] scaffold0259 (1 HSPs)
scaffold0259 (1-175)||(1851-2026)
[»] scaffold0028 (1 HSPs)
scaffold0028 (1-175)||(148556-148731)
[»] scaffold0135 (1 HSPs)
scaffold0135 (1-174)||(34666-34840)
[»] scaffold0355 (1 HSPs)
scaffold0355 (1-164)||(3449-3613)
[»] scaffold0188 (1 HSPs)
scaffold0188 (12-80)||(17556-17624)
[»] scaffold0464 (1 HSPs)
scaffold0464 (1-69)||(764-833)
[»] scaffold0197 (2 HSPs)
scaffold0197 (1-69)||(13896-13965)
scaffold0197 (12-74)||(18788-18850)
[»] scaffold0009 (1 HSPs)
scaffold0009 (1-69)||(176562-176631)
[»] scaffold0665 (2 HSPs)
scaffold0665 (1-68)||(8112-8180)
scaffold0665 (91-126)||(8148-8184)
[»] scaffold0066 (1 HSPs)
scaffold0066 (168-281)||(20615-20726)
[»] scaffold0087 (1 HSPs)
scaffold0087 (11-126)||(43558-43673)
[»] scaffold0098 (1 HSPs)
scaffold0098 (1-126)||(45584-45710)


Alignment Details
Target: chr5 (Bit Score: 231; Significance: 1e-127; HSPs: 60)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 231; E-Value: 1e-127
Query Start/End: Original strand, 17 - 295
Target Start/End: Complemental strand, 29751615 - 29751338
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| |||||||| |||||||||||||||||    
T  29751615 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtgacacgatttggaaaatcg 29751516  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaa 216  Q
    |||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |    
T  29751515 tgacacgattgctttagaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagagagagagacttgggaaatcaaagggagca 29751416  T
Q  217 actctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  29751415 actctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagagaaaatca 29751338  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 10592955 - 10593248
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| |||||||||||| |||||||||||||||||||||||| |||||||||||| || |  ||| ||| ||||| | ||||||     
T  10592955 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccgtgataaggactggtcgtttcttcggtggtacgcagatcgtga 10593054  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagactt 198  Q
    |||||||||| |||||||||||||||| |  || |||||| ||||||| | |||||||||||||||  ||||||| ||||||||||||| ||||||||||    
T  10593055 cacgatttgggaaatcgtgacacgatttcaacagaggaagactagtatgt-aagtgttcttgtgcagatttgaagagagagttggaagagagagagactt 10593153  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||||||    
T  10593154 gggaaatcaaaggg-ggaactctagggtttagggttctttgattagagtatctcttgggtag-aaaacatgggaaacaccttgtaaagagagaatca 10593248  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 25077818 - 25078110
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| ||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  25077818 cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 25077917  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaa-ggaga-gttggaagaaagagagact 197  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  |||||| ||||| ||||||||  |||||||||    
T  25077918 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagggagaggttggaag--agagagact 25078014  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25078015 tgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 25078110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 147; E-Value: 2e-77
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 25135787 - 25136079
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| ||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  25135787 cgtgtcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 25135886  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaa-ggaga-gttggaagaaagagagact 197  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  |||||| ||||| ||||||||  |||||||||    
T  25135887 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagggagaggttggaag--agagagact 25135983  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25135984 tgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 25136079  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 16544106 - 16544393
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  16544106 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 16544205  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagg--aga-gttggaagaaagagagac 196  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||||  ||| ||||||||  ||||||||    
T  16544206 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaaggcaagaggttggaag--agagagac 16544302  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  16544303 ttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 16544393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 143; E-Value: 4e-75
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 16546328 - 16546615
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  16546328 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 16546427  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagg--aga-gttggaagaaagagagac 196  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||||  ||| ||||||||  ||||||||    
T  16546428 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaaggcaagaggttggaag--agagagac 16546524  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  16546525 ttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 16546615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 40379790 - 40380076
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  40379790 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 40379889  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gaga-gttggaagaaagagagact 197  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| |||| ||||||||  |||||||||    
T  40379890 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaag--agagagact 40379986  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  40379987 tgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctctcgggttg-aaaacatgggaaacaccttgtagagaga 40380076  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 40382001 - 40382287
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  40382001 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 40382100  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gaga-gttggaagaaagagagact 197  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| |||| ||||||||  |||||||||    
T  40382101 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaag--agagagact 40382197  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||||||||||| ||| |||||||||||||||||||||||||||||||||||| |||||| |||||||||||||||||||||| |||||    
T  40382198 tgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctctcgggttg-aaaacatgggaaacaccttgtagagaga 40382287  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 29720211 - 29720354
Alignment:
Q  151 aagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatc 250  Q
    |||||||||||||||  |||||||||||||||||||| ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  29720211 aagtgttcttgtgcaaatttgaaggagagttggaagagagagaaacttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatc 29720310  T
Q  251 tcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||    
T  29720311 tcttgggttg-aaaacatgggaaacaccttgtagagagaaaatca 29720354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 18442120 - 18441840
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||| ||||||| ||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |  ||||||  | ||| |  ||||||    
T  18442120 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacgaacgcaccaatcgt 18442021  T
Q  98 ggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagact 197  Q
    | |||||  |||||| |||||||||||||   |||  ||| ||||||||| ||| |||||||||||||  |||||||||||||||||||| ||||| |||    
T  18442020 gacacgacctggaaa-tcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggagagttggaagagagagaaact 18441923  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||||||||||||| | ||||||||||||||| | |||||||||||||  ||||||||||||  |||||||||||||||||||    
T  18441922 tgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaacaccttg 18441840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 151 - 295
Target Start/End: Original strand, 29722371 - 29722514
Alignment:
Q  151 aagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatc 250  Q
    |||||||||||||||  |||||||||||||||||| | ||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||    
T  29722371 aagtgttcttgtgcagatttgaaggagagttggaaaagagagaaacttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatc 29722470  T
Q  251 tcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||| |||||||||||||||||||||| ||||| |||||    
T  29722471 tcttgggttg-aaaacatgggaaacaccttgtagagagaaaatca 29722514  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 12 - 187
Target Start/End: Complemental strand, 24136359 - 24136184
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaa 111  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||  ||||| |||||||| |||||| ||| |    
T  24136359 ttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgcaaatcgtgacacgatctgg-a 24136261  T
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    ||||||| ||||||||  ||| ||||| ||||||||||||||||||||||||||| |||| || |||| ||||||||    
T  24136260 aatcgtggcacgattgtatcagaggaaagctagtatataaagtgttcttgtgcatttttggagtagagcttggaaga 24136184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43599205 - 43599043
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||   ||| ||||||||     
T  43599205 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtga 43599107  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtg 163  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  43599106 cacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43599043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43604697 - 43604535
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||   ||| ||||||||     
T  43604697 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtga 43604599  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtg 163  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  43604598 cacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43604535  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 43610189 - 43610027
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||   ||| ||||||||     
T  43610189 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtga 43610091  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtg 163  Q
    |||||||||| |||||||||||||||||||||| |||||||||||||||||  |||||||||||    
T  43610090 cacgatttgggaaatcgtgacacgattgcttcagaggaaggctagtatatattgtgttcttgtg 43610027  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 113 - 278
Target Start/End: Complemental strand, 22536647 - 22536482
Alignment:
Q  113 atcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagaga--cttgggaaatcaaa 209  Q
    |||||||||||||| |  || |||||||||||||||  |||||||||||||||  ||||||| ||||||||||||| |||||||  ||||||||||||||    
T  22536647 atcgtgacacgatttcaacagaggaaggctagtata--aagtgttcttgtgcagatttgaagagagagttggaagagagagagagacttgggaaatcaaa 22536550  T
Q  210 gggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacacc 278  Q
    ||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||    
T  22536549 gggagaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacacc 22536482  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 9789696 - 9789416
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||| ||||||| ||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |  |||| |  | ||| |  | ||||    
T  9789696 cgtgacacgattgtgggaaatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtttcttgcgacgaacgcaccattcgt 9789597  T
Q  98 ggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagact 197  Q
    | |||||  || |||||||||||||||||   |||  ||| ||||||||| ||| |||||||||||||  |||||||||||||||||||| ||||| |||    
T  9789596 gacacgacctg-aaaatcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggagagttggaagagagagaaact 9789499  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||||||||||||| | ||||||||||||||| | |||||||||||||  ||||||||||||  |||||||||||||||||||    
T  9789498 tgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaacaccttg 9789416  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27445454 - 27445291
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||   ||| ||||||||     
T  27445454 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtga 27445356  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||||||  ||||||||||||    
T  27445355 cacgatttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 27445291  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 27450297 - 27450134
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||   ||| ||||||||     
T  27450297 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtga 27450199  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||||||| |||||||| ||||||||||||| |||||||||||||||||  ||||||||||||    
T  27450198 cacgatttgggaaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgc 27450134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 43592760 - 43592597
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||   ||| ||||||||     
T  43592760 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagacgcaaatcgtga 43592662  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||||||| |||||||||||||||||||||  |||||||||||||||||  ||||||||||||    
T  43592661 cacgatttgggaaatcgtgacacgattgcttcggaggaaggctagtatatattgtgttcttgtgc 43592597  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 13 - 281
Target Start/End: Original strand, 26177592 - 26177859
Alignment:
Q  13 tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttgga 110  Q
    ||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |||||||||  | ||| |  ||||||| |||||  ||||    
T  26177592 tgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgcaccaatcgtgacacgacctgga 26177691  T
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaag 210  Q
    || |||||||||||||   |||  ||| ||||||||| ||| ||||||||| |||  |||  | ||||||||||||| ||||| ||||||||||||||||    
T  26177692 aa-tcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgcgcagattttgaagagagttggaagagagagaaacttgggaaatcaaag 26177789  T
Q  211 ggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    || | ||||||||||||||| | |||||||||||||  ||||||||||||  |||||||| ||||||||||    
T  26177790 ggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatggtaaacaccttg 26177859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 13 - 281
Target Start/End: Original strand, 26170483 - 26170750
Alignment:
Q  13 tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttgga 110  Q
    |||||||||||||||  |||   ||||||||||||||||| ||| |||||||||||| || |||||||||  | ||| |  ||||||| |||||  ||||    
T  26170483 tgggaaatcgtgacataatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacggacgcaccaatcgtgacacgacctgga 26170582  T
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaag 210  Q
     | |||||||||||||   |||  ||| ||||||||| ||| |||||||||||||  |||  | ||||||||||||| ||||| ||||||||||||||||    
T  26170583 ta-tcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagattttgaagagagttggaagagagagaaacttgggaaatcaaag 26170680  T
Q  211 ggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    || | ||||||||||||||| | |||||||||| ||  ||||||||||||  |||||||| ||||||||||    
T  26170681 ggagtaactctagggtttagag-tctttgattacagcttctcttgggttgggaaacatggtaaacaccttg 26170750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 17 - 165
Target Start/End: Complemental strand, 35388169 - 35388021
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttggaaaat 114  Q
    |||| ||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||  ||||||  |||||||| |||||| ||| ||||    
T  35388169 aaattgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacgtacgttcaaatcgtgacacgatctgg-aaat 35388071  T
Q  115 cgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
    ||||||||||||   ||| |||||||||||||| | |||||||||||||||    
T  35388070 cgtgacacgattttatcagaggaaggctagtat-ttaagtgttcttgtgca 35388021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 66; E-Value: 3e-29
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 31180737 - 31180573
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  || |||| |||||||||||||  |||||||||||| ||| |||||||||   ||| ||||||||     
T  31180737 cgtggcacgatcttgggaaatcgtgacacgattcagagactttctcgttaagtatcactgataaggactggtca-accttgggtcagacgcaaatcgtga 31180639  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    || ||| |||| |||||||| ||||||||||||| |||||| ||||||||||  ||||||||||||    
T  31180638 catgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgc 31180573  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 16409322 - 16409451
Alignment:
Q  151 aagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatc 250  Q
    |||||||||||||||  |||  | ||||||||||||| ||||| |||||||||||||||||| | ||||||||||||||| | |||||||||||||  ||    
T  16409322 aagtgttcttgtgcagattttgaagagagttggaagagagagaaacttgggaaatcaaagggagtaactctagggtttagag-tctttgattagagcttc 16409420  T
Q  251 tcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||||||||  |||||||| ||||||||||    
T  16409421 tcttgggttgggaaacatggtaaacaccttg 16409451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 60; E-Value: 1e-25
Query Start/End: Original strand, 1 - 181
Target Start/End: Original strand, 1456750 - 1456932
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||| |||||||||||  || ||||||||||   | | ||||||||     
T  1456750 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgcttgttaagtatccctgataaggacttgtc-taccttgggtcagatgcaaatcgtga 1456848  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc-atctttgaaggagagtt 181  Q
    |||| | |||| |||||||| ||||||| ||| | |||||| ||||||||||  ||||||||||||  | ||||||||||||||    
T  1456849 cacggtcttgggaaatcgtggcacgatttctttagaggaagactagtatatattgtgttcttgtgctttttttgaaggagagtt 1456932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 22536740 - 22536633
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||| ||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||  | ||||||     
T  22536740 cgtggcacaattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacacagatcgtga 22536641  T
Q  100 cacgattt 107  Q
    ||||||||    
T  22536640 cacgattt 22536633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 82
Target Start/End: Original strand, 29720078 - 29720161
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtg-aaacttgctcgttaagtatccttgataaggactgatcataccttggg 82  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||||||||    
T  29720078 cgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttggg 29720161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 13488060 - 13488171
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| |||||||||||| ||||||    
T  13488060 tttgaaggagagctagaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttggaaaaca 13488157  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  13488158 ttgtaaacaccttg 13488171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 36074355 - 36074244
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  36074355 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 36074258  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  36074257 ttgtaaacaccttg 36074244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 15045168 - 15044994
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||| |||||||||  |||||||||||| ||| |||| ||||     | | ||||||     
T  15045168 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtca-acctggggtccgttgcagatcgtga 15045070  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||||||| |||||  ||||| ||||||||||  |||||||||||| | |||||||    
T  15045069 cacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 15044994  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 13342918 - 13343029
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| ||| |||||||||| ||||||||||||  |||||    
T  13342918 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctctgattagagt-tctcttgggttgggaaaca 13343015  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  13343016 ttgtaaacaccttg 13343029  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 25412619 - 25412730
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||  |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  25412619 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaacattagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 25412716  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  25412717 ttgtaaacaccttg 25412730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 146
Target Start/End: Complemental strand, 38219905 - 38219770
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttgg 109  Q
    ||||||||| ||||||||||| | ||||||||| ||||||| ||| |||||||||||| || ||||||| |  ||||||   ||||||| ||||||||||    
T  38219905 ttgggaaattgtgacacgattttcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacgtacgttccaatcgtgacacgatttgg 38219806  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagta 146  Q
     |||||||||||| |||   ||| |||||||||||||    
T  38219805 -aaatcgtgacacaattttatcagaggaaggctagta 38219770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29402662 - 29402728
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataagga 66  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||    
T  29402662 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataagga 29402728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #36
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 11 - 69
Target Start/End: Complemental strand, 30631825 - 30631767
Alignment:
Q  11 tttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||    
T  30631825 tttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactg 30631767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 2785850 - 2785781
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  2785850 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 2785781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #38
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 28750966 - 28750855
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||| ||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  28750966 tttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 28750869  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  28750868 ttgaaaacaccttg 28750855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 30182446 - 30182557
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||| ||||| | ||||| ||||| |||||||||||||||||  | |||| ||||| |||||| |||||||||||||| ||||||||||||  |||||    
T  30182446 tttgaatgagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggattaggg-tctttgattagagt-tctcttgggttgggaaaca 30182543  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  30182544 ttgcaaacaccttg 30182557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33768659 - 33768590
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  33768659 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 33768590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #41
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 33791791 - 33791722
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  33791791 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 33791722  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #42
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 39468860 - 39468749
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| ||||| |||||||| ||||||||||||  |||||    
T  39468860 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttcattagagt-tctcttgggttgggaaaca 39468763  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  39468762 ttgtaaacaccttg 39468749  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #43
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 66
Target Start/End: Original strand, 29722265 - 29722332
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtg-aaacttgctcgttaagtatccttgataagga 66  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||    
T  29722265 cgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataagga 29722332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #44
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 533626 - 533737
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| | |||||||||||||||  | |||| ||||| || ||| |||||||||||||| ||||||||||||  |||||    
T  533626 tttgaaggagaggttgaagagagagaaatttgggaaatcaaaggaggtaactttaggg-ttgggggtctttgattagagt-tctcttgggttgggaaaca 533723  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  533724 ttgtaaacaccttg 533737  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 9352920 - 9353046
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||||||||||| || ||||||||||||||||| | ||||||||| ||||||| | |  |||||||  || || |||||||||| |||| ||  ||||||    
T  9352920 cgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggtcgtaccttgggtcgtacatatcaatcgt 9353018  T
Q  98 ggcacgatttggaaaatcgtgacacgatt 126  Q
    |||||||||||||||| |||| |||||||    
T  9353019 ggcacgatttggaaaa-cgtggcacgatt 9353046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 30683231 - 30683120
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| ||||||||||||| |||  | || | ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  30683231 tttgaaggagagcttgaagagagagaaacttgggaaatcagaggaggtaattttagggttgaggg-tctttgattagagt-tctcttgggttgcgaaaca 30683134  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  30683133 ttgtaaacaccttg 30683120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #47
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37561059 - 37561128
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||  ||||||||||||    
T  37561059 cgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactg 37561128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #48
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 13239609 - 13239720
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| |||||| ||||| ||||| |||| | ||||||||||  | |||| || |||| ||||| ||||||||||||| ||||||||||||  |||||    
T  13239609 tttgaagtagagtttgaagagagagaaacttagaaaatcaaaggaggtaactttatggttgagggt-ctttgattagagt-tctcttgggttgggaaaca 13239706  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  13239707 ttgtaaacaccttg 13239720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 28807188 - 28807257
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| ||||||||||||||||||||   |||||||| | ||||||||||  ||||||||||||    
T  28807188 cgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactg 28807257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 195 - 280
Target Start/End: Original strand, 31182857 - 31182940
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacacctt 280  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | |||||||||    
T  31182857 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacacctt 31182940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #51
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 32636681 - 32636792
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | | ||| ||||| ||||| |||||||||||  | |||| ||||||| |||| |||||||||||||| |||||||||| |  |||||    
T  32636681 tttgaaggagagcttggagagagagaaacttgagaaatcaaaggaggtaactttagggttaaggg-tctttgattagagt-tctcttgggtagtgaaaca 32636778  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  32636779 ttgtaaacaccttg 32636792  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #52
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 37556237 - 37556306
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| ||||||||| ||||||||||   |||||||||| ||||||||||  ||||||||||||    
T  37556237 cgtggcacgatcttgggaaattgtgacacgatctagaaacttgctggttaagtatctctgataaggactg 37556306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #53
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 42426546 - 42426435
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||| | ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| |||||| | |||  |||||    
T  42426546 tttgaaggagagcttgaaaagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttagattgggaaaca 42426449  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  42426448 ttgtaaacaccttg 42426435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #54
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 42428741 - 42428630
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||    |||| ||||||| | || |||||||||||||| ||||||||||||  ||| |    
T  42428741 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggagataactttagggttgaagg-tctttgattagagt-tctcttgggttgggaaata 42428644  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  42428643 ttgtaaacaccttg 42428630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #55
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16407772 - 16407836
Alignment:
Q  18 aatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttggg 82  Q
    |||||||||||||||   ||||||||||||||||| ||| |||||||||| | || |||||||||    
T  16407772 aatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaccggtcgtaccttggg 16407836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #56
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 18 - 82
Target Start/End: Original strand, 16409208 - 16409272
Alignment:
Q  18 aatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttggg 82  Q
    |||||||||||||||   ||||||||||||||||| ||| |||||||||||| || ||| |||||    
T  16409208 aatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacattggg 16409272  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 5887700 - 5887616
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||| |||| | |||||||||||| ||||||||||||  |||||| | ||||||||||    
T  5887700 acttgggaaatcaaaggaggtaactttagggttgaggg-tatttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 5887616  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #58
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 112 - 222
Target Start/End: Original strand, 16407848 - 16407957
Alignment:
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    |||||||||||||||   |||  ||| ||||||||| ||| || ||||||||||  |||  | ||||||||||||| ||||| |||||| ||||||||||    
T  16407848 aatcgtgacacgattttatcagtggagggctagtatttaa-gtattcttgtgcagattttgaagagagttggaagagagagaaacttggaaaatcaaagg 16407946  T
Q  212 gtgaaactcta 222  Q
    | | |||||||    
T  16407947 gagtaactcta 16407957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #59
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 33831564 - 33831648
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||    || | ||||||| ||||| ||||||||||||| |||||||||||| ||||||| | ||||||||||    
T  33831564 acttgggaaatcaaaggagttaattttagggttaagggt-ctttgattagagt-tctcttgggttggaaaacattgtaaacaccttg 33831648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #60
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 36931952 - 36932061
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaat 114  Q
    |||||||||||||||| | ||||||||| ||||||| | |  |||||||  || || |||||||||| |||||||  ||||||| ||| |||| ||||||    
T  36931952 aaatcgtgacacgattttcaaacttgcttgttaagttttcaggataagg-ttggtcgtaccttgggtcgtacgtatcaatcgtgacacaattt-gaaaat 36932049  T
Q  115 cgtgacacgatt 126  Q
    |||| |||||||    
T  36932050 cgtggcacgatt 36932061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 218; Significance: 1e-120; HSPs: 51)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 218; E-Value: 1e-120
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 24789539 - 24789831
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||| ||     
T  24789539 cgtggcacgatcttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcttga 24789638  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggaga-gttggaagaaagagagactt 198  Q
    |||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||||||||  ||||||||||    
T  24789639 cacgatttgg-aaatcgtgacacgattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggagaggttggaag--agagagactt 24789735  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  24789736 gggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagagaaaatca 24789831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 11 - 289
Target Start/End: Complemental strand, 1562464 - 1562187
Alignment:
Q  11 tttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttgga 110  Q
    ||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | ||||| |  | ||| |||||||| ||||||| |||    
T  1562464 tttggtaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgtgacggacgcaaatcgtgacacgattggga 1562365  T
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag--gagagttggaagaaagagagacttgggaaatcaa 208  Q
    |||||||||||||||||   || |||||| ||||||| | | |||||||||||||  |||||||  ||||||||||||| ||||||||||||| ||||||    
T  1562364 aaatcgtgacacgattggaacagaggaagactagtat-ttatgtgttcttgtgcagatttgaaggagagagttggaagagagagagacttggggaatcaa 1562266  T
Q  209 agggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  1562265 aggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 1562187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 6592809 - 6592523
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  6592809 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 6592710  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gaga-gttggaagaaagagagact 197  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| |||| ||||||||  |||||||||    
T  6592709 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaag--agagagact 6592613  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  6592612 tgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 6592523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 140; E-Value: 2e-73
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 6595025 - 6594741
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  6595025 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 6594926  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagactt 198  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| ||||||||  ||||||||||    
T  6594925 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagag-gttggaag--agagagactt 6594830  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  6594829 gggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 6594741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 18389232 - 18388943
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  18389232 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 18389133  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagga-----gagttggaagaaagagag 194  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  ||| |||||||||||||  |||| ||       |||||||||||  |||||    
T  18389132 cacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttggagagtaaaggagttggaaga--gagag 18389036  T
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  18389035 acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 18388943  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 18392668 - 18392379
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  18392668 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 18392569  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagga-----gagttggaagaaagagag 194  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  ||| |||||||||||||  |||| ||       |||||||||||  |||||    
T  18392568 cacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttggagagtaaaggagttggaaga--gagag 18392472  T
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  18392471 acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 18392379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 2058493 - 2058329
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||     
T  2058493 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtga 2058394  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
    |||||| ||| |||||||| ||||||||||||| |||||||||||||||||  |||||||||||||    
T  2058393 cacgatctgg-aaatcgtggcacgattgcttcagaggaaggctagtatatattgtgttcttgtgca 2058329  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 20343612 - 20343887
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| | |||||      
T  20343612 cgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgt-- 20343709  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagtt--ggaagaaagagagac 196  Q
                      ||||||||| |  || |||||| ||||||||  |||||||||||||||  ||||||| |||||||  |||||| ||||||||    
T  20343710 ------------------gacacgatttcaacagaggaagactagtata--aagtgttcttgtgcagatttgaagagagagttttggaagagagagagac 20343789  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  20343790 ttggggaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 20343887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 32060776 - 32060503
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  32060776 cgtggcacgatttgggaaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 32060677  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagg--aga-gttggaagaaagagagac 196  Q
    ||||| ||||||                   || |||||| ||||||  | |||||||||||||||  ||||||||  ||| ||||||||  ||||||||    
T  32060676 cacga-ttggaa-------------------cagaggaagactagta-cttaagtgttcttgtgcagatttgaagggaagaggttggaag--agagagac 32060600  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  32060599 ttgggaaatcaaagggt-aagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 32060503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 1533028 - 1533203
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaa 111  Q
    |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| | ||||||||||   |||  |||||||| |||||| ||| |    
T  1533028 ttgggaaatcgtgacacgattgtgaaacttactcgttaagtatccttgataaggactggttataccttgggacatacacaaatcgtgacacgatctgg-a 1533126  T
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    ||||||| ||||||||||||| ||||||||||||||||| ||||||||||| ||  ||||| |||||| ||||||||    
T  1533127 aatcgtggcacgattgcttcagaggaaggctagtatatatagtgttcttgtacagatttgagggagagcttggaaga 1533203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 79; E-Value: 6e-37
Query Start/End: Original strand, 91 - 281
Target Start/End: Original strand, 39731158 - 39731345
Alignment:
Q  91 aaatcgtggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaag 190  Q
    |||||||| |||||| || |||||||||||||||||   |||| ||||||||||||| ||| |||||||||||||  |||  | ||||||||||||| ||    
T  39731158 aaatcgtgacacgatctg-aaaatcgtgacacgattttatcaatggaaggctagtatttaa-gtgttcttgtgcagattttgaagagagttggaagagag 39731255  T
Q  191 agagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||| |||||||||||||||||| | ||||||||||||||||| |||||||||||||  ||||||||||||  |||||| | ||||||||||    
T  39731256 agaaacttgggaaatcaaagggagtaactctagggtttaggg-tctttgattagagcttctcttgggttgggaaacattgtaaacaccttg 39731345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 11 - 254
Target Start/End: Complemental strand, 25767422 - 25767180
Alignment:
Q  11 tttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttg 108  Q
    |||||||||||||||||||||| | ||||||||||||||||| ||   ||||||||| | || | ||||| |  |||||||  ||||||| ||||| |||    
T  25767422 tttgggaaatcgtgacacgattttcaaacttgctcgttaagtttctaggataaggacaggtcgtgccttgtgacgtacgtaccaatcgtgacacgacttg 25767323  T
Q  109 gaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca-tctttgaaggagagttggaagaaagagagacttgggaaatca 207  Q
    | ||||||||||||||||   |||| ||||| ||||||| | |||||||||||||||   |||||||||||| | ||||| ||||| ||||| |||||||    
T  25767322 g-aaatcgtgacacgattttatcaatggaagactagtat-ttaagtgttcttgtgcagattttgaaggagagct-gaagagagagaaacttgagaaatca 25767226  T
Q  208 aagggtgaaactctagggtttagggttctttgattagagtatctctt 254  Q
    ||||| | ||||||||||||||||| |||||||||||||| ||||||    
T  25767225 aagggagcaactctagggtttaggg-tctttgattagagtttctctt 25767180  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 21646518 - 21646365
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttgg 109  Q
    |||| |||||||||||||||| | ||||||||||||||||||||||||||||| |||| ||||||||||||  ||||||  |||||||| |||||| |||    
T  21646518 ttggaaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataagaactggtcataccttgggacgtacgttcaaatcgtgccacgatctgg 21646419  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
     ||||||||||||||||   ||| |||||||||||||| | |||||||||||||||    
T  21646418 -aaatcgtgacacgattttatcagaggaaggctagtat-ttaagtgttcttgtgca 21646365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 72; E-Value: 9e-33
Query Start/End: Original strand, 112 - 295
Target Start/End: Complemental strand, 43504514 - 43504333
Alignment:
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    |||||||||||||||   |||  ||| ||||||||| ||| |||||| ||||||  ||||||| || ||||||||| ||||| |||||||||||||||||    
T  43504514 aatcgtgacacgattttatcagtggagggctagtatttaa-gtgttcctgtgcagatttgaagaagggttggaagagagagaaacttgggaaatcaaagg 43504416  T
Q  212 gtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    | ||||||||||||||||| | |||||||||||||  |||||||| |||  ||||||||||||||||||| | ||||| |||||    
T  43504415 gagaaactctagggtttagag-tctttgattagagcttctcttggcttgggaaacatgggaaacaccttgaagagagaaaatca 43504333  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 20357140 - 20357246
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||| ||||  ||||||||||||||||||||||||||||||||| | ||| |||||||||   ||| |||||||||    
T  20357140 cgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcgttaagtatccttgataaggaccggtcaaaccttgggtcagacgcaaatcgtgg 20357239  T
Q  100 cacgatt 106  Q
    |||||||    
T  20357240 cacgatt 20357246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 112 - 281
Target Start/End: Original strand, 48408605 - 48408771
Alignment:
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    |||||||||||||||   |||  ||||| ||||||| ||| |||||||||||||  |||  | |||||  |||||| ||||| |||||||||||||||||    
T  48408605 aatcgtgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagattttgaagagagc-ggaagagagagaaacttgggaaatcaaagg 48408702  T
Q  212 gtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    | | ||||||||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  48408703 gagcaactctagggtttaggg-tctttgattagagtttctcttgggttgggaaacattgtaaacaccttg 48408771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 150
Target Start/End: Complemental strand, 12406745 - 12406595
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  || ||||||||||     | ||||||||     
T  12406745 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtga 12406647  T
Q  100 cacgattt-ggaaaatcgtgacacgattgcttcaaaggaaggctagtatata 150  Q
    |||||||| || |||||||| ||||||| ||||| |||||| ||||||||||    
T  12406646 cacgatttggggaaatcgtggcacgatttcttcagaggaagactagtatata 12406595  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 164
Target Start/End: Complemental strand, 12397381 - 12397229
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgattt-gga 110  Q
    |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  || ||||||||||     | |||||||| |||||||| ||     
T  12397381 ttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtgacacgatttgggg 12397283  T
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||||| ||||||| ||||| |||||  ||||||||||  ||||||||||||    
T  12397282 aaatcgtggcacgatttcttcagaggaatactagtatatattgtgttcttgtgc 12397229  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 174
Target Start/End: Complemental strand, 4873609 - 4873435
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||  |||||||||||  || | ||||||||     | ||||||||     
T  4873609 cgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatcactgataaggacttgtc-ttccttgggtccgttgcaaatcgtga 4873511  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||| | |||||||    
T  4873510 cacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 4873435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 4586018 - 4586129
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||||| ||||| ||| | ||||||||||||||||| || |||| ||||||| | || |||||||||||||| ||||||||||||  |||||    
T  4586018 tttgaaggagagttagaagagagaaaaacttgggaaatcaaaggatgtaactttagggttga-ggctctttgattagagt-tctcttgggttgggaaaca 4586115  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  4586116 ttgtaaacaccttg 4586129  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 16 - 126
Target Start/End: Complemental strand, 18409270 - 18409159
Alignment:
Q  16 gaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaa 113  Q
    ||||||||||||||||| | ||||||||| ||||||| ||| |||||||||||| || ||||||| |  |||||||  ||||||| ||||| |||| |||    
T  18409270 gaaatcgtgacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttgg-aaa 18409172  T
Q  114 tcgtgacacgatt 126  Q
    |||||||||||||    
T  18409171 tcgtgacacgatt 18409159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24023931 - 24024000
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||    
T  24023931 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactg 24024000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 24515071 - 24514960
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  24515071 tttgaaggggagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 24514974  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  24514973 ttgtaaacaccttg 24514960  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 29990912 - 29991023
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||||| ||||| ||||| |||||||||||||||||    |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  29990912 tttgaaggtgagtttgaagagagagaaacttgggaaatcaaaggagacaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 29991009  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  29991010 ttgtaaacaccttg 29991023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 18414150 - 18413997
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttgg 109  Q
    |||||||||||| |||||||| | ||||||||| ||||||| ||| |||||||||||| || ||||||| |  |||||||  ||||||| ||||| ||||    
T  18414150 ttgggaaatcgtaacacgattctcaaacttgcttgttaagtttccatgataaggactggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttgg 18414051  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
     |||||||||||| |||   |||  ||||| ||||||| | |||||||||||||||    
T  18414050 -aaatcgtgacacaattttatcattggaagactagtat-ttaagtgttcttgtgca 18413997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Complemental strand, 21640299 - 21640205
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatt 106  Q
    |||||||||||||||||||||  ||||||||||| |||||||||  |||||||||||| |||| ||||||   | ||| |||||||| |||||||    
T  21640299 ttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacggacgcaaatcgtgacacgatt 21640205  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 4178632 - 4178743
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| ||||| |||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  4178632 tttgaaggtgagcttgaagagagagaaacttgagaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 4178729  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  4178730 ttgtaaacaccttg 4178743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 24265789 - 24265858
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  24265789 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 24265858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 30025043 - 30024932
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||| ||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| |||||| |||||||||||     
T  30025043 tttgaatgagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttaggttgaaaaacg 30024946  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  30024945 ttgtaaacaccttg 30024932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 13 - 82
Target Start/End: Complemental strand, 43504595 - 43504526
Alignment:
Q  13 tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttggg 82  Q
    ||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |||||||||    
T  43504595 tgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttggg 43504526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 31109183 - 31109357
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| |||||||||   |||||||||||  || | |||||||      | | ||||||     
T  31109183 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtataactgataaggacttgtc-tgccttggggccgttgcagatcgtga 31109281  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||| | |||||||    
T  31109282 cacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 31109357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 48489270 - 48489399
Alignment:
Q  151 aagtgttcttgtgcatcttt-gaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtat 249  Q
    |||||||||||||||  ||| |||| |||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| | || |||||||||||||| |    
T  48489270 aagtgttcttgtgcagattttgaagaagagattgaagatagagaaacttgggaaatcaaaggaggtaactttagggttgatgg-tctttgattagagt-t 48489367  T
Q  250 ctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||  |||||| | ||||||||||    
T  48489368 ctcttgggttgggaaacattgtaaacaccttg 48489399  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 105
Target Start/End: Original strand, 39731064 - 39731153
Alignment:
Q  18 aatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgat 105  Q
    |||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |||||||||  |||||||  ||||||| ||||||    
T  39731064 aatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgtaccaatcgtgacacgat 39731153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 1113514 - 1113625
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| |||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  1113514 tttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 1113611  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||| ||||    
T  1113612 ttgtaaacaacttg 1113625  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 21811851 - 21811920
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||  ||||||||||||    
T  21811851 cgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctagttaagtatctctgataaggactg 21811920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #36
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 24260945 - 24261002
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  24260945 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 24261002  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 35853772 - 35853883
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| |||| | ||||| ||||| |||| ||||||||||||  | |||| |||||||||||| ||||||||| |||| ||||||||||||  |||||    
T  35853772 tttgaagaagagcttgaagagagagaaacttaggaaatcaaaggtagcaactttagggtttaggg-tctttgatttgagt-tctcttgggttgggaaaca 35853869  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  35853870 ttgtaaacaccttg 35853883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #38
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 38671506 - 38671422
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  38671506 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 38671422  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #39
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 43864116 - 43864212
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  |||||| | ||||||||||    
T  43864116 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttgggaaacattgtaaacaccttg 43864212  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #40
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 47676432 - 47676336
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||||||||    |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  47676432 gaagagagagaaacttgggaaatcaaaggagataactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 47676336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #41
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 111 - 187
Target Start/End: Complemental strand, 21640220 - 21640143
Alignment:
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||||||||||||||||||| | | || ||||||||||  ||||||||||||   |||||||||||| ||||||||    
T  21640220 aaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgctattttgaaggagagcttggaaga 21640143  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #42
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 23554897 - 23555008
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | ||||  |||||| | || |||||||||||||| ||||||| ||||  |||||    
T  23554897 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaacttcagggttgaagg-tctttgattagagt-tctcttgagttgggaaaca 23554994  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  23554995 ttgtaaacaccttg 23555008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 120 - 179
Target Start/End: Original strand, 20357240 - 20357298
Alignment:
Q  120 cacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag 179  Q
    ||||||||||||| |||||| ||||||||||  |||||||||||| | ||||||||||||    
T  20357240 cacgattgcttcagaggaagactagtatatattgtgttcttgtgc-tttttgaaggagag 20357298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #44
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 14070129 - 14070033
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||||||||  | |||| ||||| | |||| |||||||||||||| ||||||||||||   ||||| | ||||||||||    
T  14070129 gaagagagagaaacttgggaaatcaaaggaggtaactttagggctgaggg-tctttgattagagt-tctcttgggttgggtaacattgtaaacaccttg 14070033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 14380157 - 14380061
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||||||||  | |||| ||||| | |||| |||||||||||||| ||||||||||||   ||||| | ||||||||||    
T  14380157 gaagagagagaaacttgggaaatcaaaggaggtaactttagggctgaggg-tctttgattagagt-tctcttgggttgggtaacattgtaaacaccttg 14380061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #46
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 16880536 - 16880479
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||| |||||||||||  |||||||||| ||||||| ||  ||||||||||||    
T  16880536 ttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactg 16880479  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #47
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 16885391 - 16885334
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||| |||||||||||  |||||||||| ||||||| ||  ||||||||||||    
T  16885391 ttgggaaattgtgacacgattcagaaacttgctggttaagtttctctgataaggactg 16885334  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 18126501 - 18126612
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| |||| | ||| | ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| |||| |||||||  |||||    
T  18126501 tttgaagaagagcttgaatagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcatgggttgggaaaca 18126598  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||| ||||    
T  18126599 ttgtaaacaacttg 18126612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 19502035 - 19502146
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| |  |||| ||| | ||||| ||||||||| |  | |||| ||||||| ||||| ||||||||||||| ||||||||||||  |||||    
T  19502035 tttgaaggagagcttaaagagagacaaacttgagaaatcaaatgaggtaactttagggttgagggt-ctttgattagagt-tctcttgggttgggaaaca 19502132  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  19502133 ttgtaaacaccttg 19502146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #50
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 31733280 - 31733169
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| | || ||||||| ||||| ||||| ||||||||| |  | |||| ||| ||| ||||| ||||||||||||| ||||||||||||  |||||    
T  31733280 tttgaagaaaagctggaagagagagaaacttgagaaatcaaaagaggtaactttagagttgagggt-ctttgattagagt-tctcttgggttgggaaaca 31733183  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  31733182 ttgtaaacaccttg 31733169  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 16 - 80
Target Start/End: Original strand, 48408527 - 48408591
Alignment:
Q  16 gaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttg 80  Q
    |||||||||||||||||   ||||||||||||||||| ||   ||||||||||| || |||||||    
T  48408527 gaaatcgtgacacgatttgcaaacttgctcgttaagtttctaggataaggactggtcgtaccttg 48408591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 211; Significance: 1e-115; HSPs: 38)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 211; E-Value: 1e-115
Query Start/End: Original strand, 1 - 301
Target Start/End: Complemental strand, 20622708 - 20622410
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||| |||||||||    
T  20622708 cgtgacacgattgtgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactggtcataccttgggtggtacgcaaatcgtgg 20622609  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttg 199  Q
    || |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||| | ||||||||  |||||||||||    
T  20622608 catgatttggaaaatcgtgacacaattgcttcagaggaaggctagtatataaagtgttcttgtgcatctttgaaggggggttggaag--agagagacttg 20622511  T
Q  200 ggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatcactga 299  Q
    |||||||||| || | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| || || ||||| |||    
T  20622510 ggaaatcaaatggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagggaaaatcattga 20622412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 153; E-Value: 4e-81
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 9036132 - 9036407
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |  |||||||  |||| | |||||| ||||||| |||||||||    
T  9036132 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtgttacgcagatcgtgacacgattgggaaaatcg 9036231  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||| |  || |||||| ||||  |||||||||||||||||||  |||||||  ||| ||| |||| |||||||||||||||||||||||| |     
T  9036232 tgacacgatttcaacagaggaagactag--tataaagtgttcttgtgcagatttgaagaggagtttgaaagagagagagacttgggaaatcaaaggg-gc 9036328  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  9036329 aactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 9036407  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 144; E-Value: 1e-75
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 44203330 - 44203617
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  44203330 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 44203429  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag---gagagttggaagaaagagagac 196  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  |||||||   ||||||||||||  ||||||||    
T  44203430 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagggtgagagttggaag--agagagac 44203526  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  44203527 ttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 44203617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 128; E-Value: 3e-66
Query Start/End: Original strand, 11 - 295
Target Start/End: Original strand, 9986909 - 9987192
Alignment:
Q  11 tttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttg 108  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||| | |||||||||| ||||||||||||  | | | |  ||||||| |||||| ||    
T  9986909 tttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccataataaggactggtcataccttgggacggatgcaccaatcgtgacacgatctg 9987008  T
Q  109 gaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaa 208  Q
    |||| ||||||||| |||   |||  ||| ||||||||| ||| |||||||||||||  |||||||| ||||||||||| ||| ||||||||||||||||    
T  9987009 gaaa-tcgtgacacaattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggtgagttggaagagagatagacttgggaaatcaa 9987106  T
Q  209 agggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  9987107 agggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagagaaaatca 9987192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 283
Target Start/End: Original strand, 21053652 - 21053936
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtg-aaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcg 96  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| |||||||||| |  | | | |  |||||    
T  21053652 cgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgagacggatgcaccaatcg 21053751  T
Q  97 tggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagaga 195  Q
    || ||||||  ||||| |||||||||||||   |||  |||||||  |||| ||| |||||||||||||  ||||||| ||||||||||||| |||||||    
T  21053752 tgacacgatcaggaaa-tcgtgacacgattttatcagtggaaggcatgtatttaa-gtgttcttgtgcagatttgaagtgagagttggaagagagagaga 21053849  T
Q  196 cttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgta 283  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||    
T  21053850 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgta 21053936  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 40282071 - 40282367
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtg-aaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcg 96  Q
    |||| ||||||| ||| ||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||||||||  | | | |  |||||    
T  40282071 cgtgacacgattgtggtaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgcaccaatcg 40282170  T
Q  97 tggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagaga 195  Q
    || ||||||  ||||| |||||||||||||   |||  |||||||  |||| ||| |||||||||||||  ||||||| ||||||||||||| ||||| |    
T  40282171 tgacacgatcaggaaa-tcgtgacacgattttatcagtggaaggcatgtatttaa-gtgttcttgtgcagatttgaagagagagttggaagagagagaaa 40282268  T
Q  196 cttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  40282269 cttgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagagaaaatca 40282367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 24786937 - 24787124
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| |||||||||   ||| ||||||||     
T  24786937 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtga 24787036  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||| ||| |||||||| ||||||||||||| |||||| ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  24787037 cacgatctgg-aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttgaaggagagcttggaaga 24787124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 1 - 163
Target Start/End: Original strand, 24793759 - 24793921
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| |||||||||   ||| ||||||||     
T  24793759 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtga 24793858  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtg 163  Q
    |||||| ||| |||||||| ||||||||||||| |||||| ||||||||||  |||||||||||    
T  24793859 cacgatctgg-aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtg 24793921  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 73; E-Value: 2e-33
Query Start/End: Original strand, 17 - 166
Target Start/End: Original strand, 24202360 - 24202509
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttggaaaat 114  Q
    |||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||| ||||||  | ||||  |||||||| |||||| ||| ||||    
T  24202360 aaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcatatcttgggacgcacgttcaaatcgtgacacgatctgg-aaat 24202458  T
Q  115 cgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcat 166  Q
    |||||||||||||  ||| |||||||||||||| | ||||||||||||||||    
T  24202459 cgtgacacgattgtatcagaggaaggctagtat-ttaagtgttcttgtgcat 24202509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 59; E-Value: 5e-25
Query Start/End: Original strand, 112 - 281
Target Start/End: Original strand, 51765197 - 51765363
Alignment:
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatcttt-gaaggagagttggaagaaagagagacttgggaaatcaaag 210  Q
    |||||||||||||||   |||  ||||||||||||| ||| |||||||||||||  ||| ||||| |||||||||||  |||| ||||||||||||||||    
T  51765197 aatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttgaagg-gagttggaagagtgagaaacttgggaaatcaaag 51765294  T
Q  211 ggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    || | ||||||||||||||||| |||||||||||||  ||||||||||||  |||||| | ||||||||||    
T  51765295 ggagtaactctagggtttaggg-tctttgattagagcttctcttgggttg-gaaacattgtaaacaccttg 51765363  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 41398729 - 41398547
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||| ||||||||||||| ||| |||| ||||     | | ||||||     
T  41398729 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatcattgataaggactggtca-acctggggtccgctgcagatcgtga 41398631  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttg 182  Q
    |||||| | || |||||||| ||||||| |||||  ||||| ||||||||||  |||||||||||| | ||||||| |||||||    
T  41398630 cacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagtagagttg 41398547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 182
Target Start/End: Complemental strand, 41391074 - 41390892
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||| ||||  ||||||||||| |||||||||  |||||||||||| ||| |||| ||||     | | ||||||     
T  41391074 cgtggcacgatcttgggaaatcgtgacatgattcagaaacttgctcattaagtatcactgataaggactggtca-acctggggtccgctgcagatcgtga 41390976  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttg 182  Q
    |||||| | || |||||||| ||||||| |||||  ||||| ||||||||||  |||||||||||| | ||||||| |||||||    
T  41390975 cacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaagtagagttg 41390892  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 20762529 - 20762640
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||| ||||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  20762529 tttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 20762626  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  20762627 ttgtaaacaccttg 20762640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 168 - 259
Target Start/End: Original strand, 3156723 - 3156812
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggtt 259  Q
    |||||||||||| ||||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| |||||||||||    
T  3156723 tttgaaggagagctggaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggtt 3156812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 13316614 - 13316518
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  13316614 gaagagagagaaacttgggaaatcaaaggtagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 13316518  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 1054626 - 1054695
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  1054626 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactg 1054695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 44023489 - 44023558
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  44023489 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactg 44023558  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 165
Target Start/End: Original strand, 19365893 - 19366046
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttgg 109  Q
    ||||||||||||||||||||| | ||||||||||||||| | |||  ||||||||| | || ||| ||| |  |||||||  ||||||| ||||| ||||    
T  19365893 ttgggaaatcgtgacacgattttcaaacttgctcgttaattttccaggataaggacaggtcgtacattgtgacgtacgtaccaatcgtgacacgacttgg 19365992  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
     ||||||||||||||||   |||  ||||| ||||||| | |||||||||||||||    
T  19365993 -aaatcgtgacacgattttatcagtggaagactagtat-ttaagtgttcttgtgca 19366046  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 107
Target Start/End: Original strand, 19361037 - 19361134
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgattt 107  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||  ||||||||| | || ||||||| |  |||||||  ||||||| ||||||||    
T  19361037 ttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgattt 19361134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 18 - 80
Target Start/End: Original strand, 51765121 - 51765183
Alignment:
Q  18 aatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttg 80  Q
    |||||||||||||||   ||||||||||||||||| ||| |||||||||||| ||||||||||    
T  51765121 aatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttg 51765183  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 3189188 - 3189299
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||||||||   ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  |||||    
T  3189188 tttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttgggaaaca 3189285  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  3189286 ttgtaaacaccttg 3189299  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 3198005 - 3198116
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||||||||   ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  |||||    
T  3198005 tttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttgggaaaca 3198102  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  3198103 ttgtaaacaccttg 3198116  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 3206844 - 3206955
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||||||||   ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  |||||    
T  3206844 tttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttgggaaaca 3206941  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  3206942 ttgtaaacaccttg 3206955  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 10925080 - 10925191
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||| ||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  |||||    
T  10925080 tttgaaggagagcttgaagagagagaaacttggaaaatcaaaggaggtaactttagggttgaggg-tctttgattatagt-tctcttgggttgggaaaca 10925177  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  10925178 ttgtaaacaccttg 10925191  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25439511 - 25439580
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||  ||||||||||||    
T  25439511 cgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactg 25439580  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 28220537 - 28220426
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  || ||    
T  28220537 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaagca 28220440  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  28220439 ttgaaaacaccttg 28220426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 28223732 - 28223621
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  28223732 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 28223635  T
Q  268 tgggaaacaccttg 281  Q
    | | | ||||||||    
T  28223634 ttgaagacaccttg 28223621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 37503865 - 37503754
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  |  ||| ||||||| |||| |||||||||||||| ||| |||||||| |||| |    
T  37503865 tttgaaggagaggttgaagagagagaaacttgggaaatcaaaggaggtgactttagggttgaggg-tctttgattagagt-tctattgggttggaaaata 37503768  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  37503767 ttgtaaacaccttg 37503754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 39445970 - 39445901
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||| |||||||||   |||||||||||||||||||||  ||||||||||||    
T  39445970 cgtggcacgatcttgggaaatcatgacacgatccagaaacttgctcgttaagtatcactgataaggactg 39445901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 151 - 281
Target Start/End: Original strand, 44454999 - 44455128
Alignment:
Q  151 aagtgttcttgtgcatcttt-gaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtat 249  Q
    |||||||||||||||  ||| ||||||||| | | ||| ||||| |||||| ||||||||||  | |||| ||||||| |||| |||||||||||||| |    
T  44454999 aagtgttcttgtgcagattttgaaggagaggttgtagagagagaaacttggtaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-t 44455096  T
Q  250 ctcttgggttgaaaaacatgggaaacaccttg 281  Q
     ||||||||||  |||||| | ||||||||||    
T  44455097 ttcttgggttgggaaacattgtaaacaccttg 44455128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 31659110 - 31659206
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| |||||||||||   |||||| | ||||||||||    
T  31659110 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttcggaaacattgtaaacaccttg 31659206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 25444704 - 25444773
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| ||||||||||||||||||||   |||||||| | ||||||||||  ||||||||||||    
T  25444704 cgtggcacgatcttgggaaatcgtgacacgatccagaaacttgttggttaagtatctctgataaggactg 25444773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 43988073 - 43988130
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||| ||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  43988073 ttggtaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 43988130  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 197192 - 197108
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||| ||||||||||  | |||| ||||||| ||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  197192 acttggaaaatcaaaggaggtaactttagggttgagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 197108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 834451 - 834367
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  |||||| | ||||||||||    
T  834451 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttgggaaacattgtaaacaccttg 834367  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 3847405 - 3847321
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||  ||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  3847405 acttgggaaatcaaaggaggtaactttagggtcgagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 3847321  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 1833379 - 1833490
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||| ||||| | ||||| ||||| |||||||||||||||||    |||| || |||| |||| |||||||||||||| |||||||| |||  |||||    
T  1833379 tttgaatgagagattgaagagagagaaacttgggaaatcaaaggagataactttaaggttgaggg-tctttgattagagt-tctcttggattgggaaaca 1833476  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  1833477 ttgtaaacaccttg 1833490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 168 - 256
Target Start/End: Original strand, 49918206 - 49918292
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgg 256  Q
    ||||||| |||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| | || |||||||||||||| ||||||||    
T  49918206 tttgaagtagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaagg-tctttgattagagt-tctcttgg 49918292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 186; Significance: 1e-101; HSPs: 58)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 186; E-Value: 1e-101
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 54634822 - 54635115
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| ||||| ||     
T  54634822 cgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcttttcttgggtggtacgcaaatcatga 54634921  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagactt 198  Q
    ||||||| |||||||||||||||||||||  || |||||||||||  |||||||||||||||||||  ||||||| | ||||||||||| ||||||||||    
T  54634922 cacgattgggaaaatcgtgacacgattgcaacagaggaaggctag--tataaagtgttcttgtgcagatttgaagagggagttggaagagagagagactt 54635019  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  54635020 gggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 54635115  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 170; E-Value: 3e-91
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 6716197 - 6716490
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| |||||   ||||||     
T  6716197 cgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtga 6716296  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagactt 198  Q
    ||||||||||||||||||||||||||| |  || |||||| ||||  |||||||||||||||||||  |||||||  || ||||||||| ||||||||||    
T  6716297 cacgatttggaaaatcgtgacacgatttcaacagaggaagactag--tataaagtgttcttgtgcagatttgaagaaagggttggaagagagagagactt 6716394  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6716395 gggaaatcaaagggagtaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 6716490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 166; E-Value: 7e-89
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 6718381 - 6718674
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| ||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| |||||   ||||||     
T  6718381 cgtgtcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcggatcgtga 6718480  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagga-gagttggaagaaagagagactt 198  Q
    ||||||||| ||||||||||||||||| |  || |||||| ||||||||  |||||||||||||||  ||||||| | | ||||||||| ||||||||||    
T  6718481 cacgatttgaaaaatcgtgacacgatttcaacagaggaagactagtata--aagtgttcttgtgcagatttgaagaaagggttggaagagagagagactt 6718578  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  6718579 gggaaatcaaagggagtaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 6718674  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 165; E-Value: 3e-88
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 45282678 - 45282973
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| | ||||||     
T  45282678 cgtgacacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtga 45282777  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttgga--agaaagagagac 196  Q
    ||||||| ||||||||||||||||||| |  || |||||||||||  |||||||||||||||||||  ||||||| ||||||||||  ||| ||||||||    
T  45282778 cacgattgggaaaatcgtgacacgatttcaacagaggaaggctag--tataaagtgttcttgtgcagatttgaagagagagttggaagagagagagagac 45282875  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||    
T  45282876 ttggggaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgcaaagagagaatca 45282973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 151; E-Value: 6e-80
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 25637125 - 25637412
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  25637125 cgtggcacgattgtgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 25637224  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggaga-gttggaagaaagagagactt 198  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  |||||||  || ||||||||| ||||||||||    
T  25637225 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagaggaggttggaagagagagagactt 25637323  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||| | | ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  25637324 gggaaatcaaaggg-gtatctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 25637412  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 3617146 - 3617439
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||| | ||| || | |||||||  | ||| ||||||||     
T  3617146 cgtgtcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataacggctggtcgttccttgggacggacgcaaatcgtga 3617245  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttga--aggaga-gttggaagaaagagagac 196  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  |||||  || ||| ||||||||  ||||||||    
T  3617246 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagtagaggttggaag--agagagac 3617342  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  3617343 ttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 3617439  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 134; E-Value: 9e-70
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 4601216 - 4600928
Alignment:
Q  1 cgtggcacgattt--gggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtg 98  Q
    |||||||||||||  ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||    
T  4601216 cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 4601117  T
Q  99 gcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagg---agagttggaagaaagagaga 195  Q
     ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  |||||| |   |||||||||||  |||||||    
T  4601116 acacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaaaggaaagagttggaag--agagaga 4601020  T
Q  196 cttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  4601019 cttgggaaatcaaaggg-aaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 4600928  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 4598995 - 4598707
Alignment:
Q  1 cgtggcacgattt--gggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtg 98  Q
    |||||||||||||  ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||    
T  4598995 cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 4598896  T
Q  99 gcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaa---ggagagttggaagaaagagaga 195  Q
     ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||    ||||||||||||  |||||||    
T  4598895 acacgattgggaaaatcgtgacacgattgaaacagaggaagactagta-cttaagtgttcttgtgcagatttgaaaggagagagttggaag--agagaga 4598799  T
Q  196 cttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  4598798 cttgggaaatcaaaggg-aaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccctgtagagaga 4598707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 10058157 - 10058425
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  ||||| |||||||| ||||||| || ||||||    
T  10058157 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgacacgattgggcaaatcg 10058256  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| |||| |||  |||||||||||||||||||||||| ||    
T  10058257 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaag--agagagacttgggaaatcaaaggg-ga 10058352  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10058353 agctctagagtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 10058425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 10060379 - 10060647
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  ||||| |||||||| ||||||| || ||||||    
T  10060379 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgacacgattgggcaaatcg 10060478  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| |||| |||  |||||||||||||||||||||||| ||    
T  10060479 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaag--agagagacttgggaaatcaaaggg-ga 10060574  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10060575 agctctagagtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 10060647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 10062601 - 10062869
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  ||||| |||||||| ||||||| || ||||||    
T  10062601 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgacacgattgggcaaatcg 10062700  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| |||| |||  |||||||||||||||||||||||| ||    
T  10062701 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaag--agagagacttgggaaatcaaaggg-ga 10062796  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10062797 agctctagagtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 10062869  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 10064823 - 10065091
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  ||||| |||||||| ||||||| || ||||||    
T  10064823 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgacacgattgggcaaatcg 10064922  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| |||| |||  |||||||||||||||||||||||| ||    
T  10064923 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaag--agagagacttgggaaatcaaaggg-ga 10065018  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10065019 agctctagagtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 10065091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 10055935 - 10056203
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| |||||||| ||||||| || ||||||    
T  10055935 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggcaaatcg 10056034  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| |||| |||  |||||||||||||||||||||||| ||    
T  10056035 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaag--agagagacttgggaaatcaaaggg-ga 10056130  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10056131 agctctagagtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 10056203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 10067045 - 10067313
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| |||||||| ||||||| || ||||||    
T  10067045 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggcaaatcg 10067144  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| |||| |||  |||||||||||||||||||||||| ||    
T  10067145 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaag--agagagacttgggaaatcaaaggg-ga 10067240  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10067241 agctctagagtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 10067313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 10211090 - 10211379
Alignment:
Q  1 cgtggcacgatttggg--aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtg 98  Q
    ||||||||||||| ||  ||||| |||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||    
T  10211090 cgtggcacgattttgggaaaatcatgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 10211189  T
Q  99 gcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggaga----gttggaagaaagagag 194  Q
     ||||||| ||||||||||||||||||||   || |||||| ||||||  ||| |||||||||||||  ||||||| | |    |||||||||  |||||    
T  10211190 acacgattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagtaaaagaggttggaaga--gagag 10211286  T
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10211287 acttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 10211379  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 8477890 - 8477729
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||     
T  8477890 cgtggcacgatcttgggaaatcgtgacacgattgagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtga 8477791  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtg 163  Q
    |||||| ||| |||||||||||||||||||||| |||||||||||||| | |||||||||||||    
T  8477790 cacgatctgg-aaatcgtgacacgattgcttcagaggaaggctagtat-ttaagtgttcttgtg 8477729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 23198417 - 23198137
Alignment:
Q  1 cgtggcacgatttgg-gaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||| |||||||||| | |||||||||||||||   ||||||||||||||||| |||  ||||||||||| || ||||||| |  |||||||  ||||||    
T  23198417 cgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgacgtacgtaccaatcgt 23198318  T
Q  98 ggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagact 197  Q
    | ||||||||||||| |||||||||||||   |||  ||||| ||||||| ||| |||||||||||||  |||  | ||||||||||||| ||||| |||    
T  23198317 gacacgatttggaaa-tcgtgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagattttgaagagagttggaagagagagaaact 23198220  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||| ||||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  23198219 tggaaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctcttgggttgggaaacattgtaaacaccttg 23198137  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 8738635 - 8738822
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||   | ||| ||||||||     
T  8738635 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtga 8738734  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    || ||| ||| |||||||| ||||||||||||| |||||| ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  8738735 catgatctgg-aaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttgaaggagagcttggaaga 8738822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 9090873 - 9091060
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||   | ||| ||||||||     
T  9090873 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtga 9090972  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    || ||| ||| |||||||| ||||||||||||| |||||| ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  9090973 catgatctgg-aaatcgtggcacgattgcttcagaggaagtctagtatatattgtgttcttgtgcttttttgaaggagagcttggaaga 9091060  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 23200616 - 23200336
Alignment:
Q  1 cgtggcacgatttgg-gaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||| |||||||||| | |||||||||||||||   ||||||||||||||||| |||  ||||||||||| || ||||||| |   ||||||  ||||||    
T  23200616 cgtgacacgatttggaggaatcgtgacacgatttgcaaacttgctcgttaagtttccaggataaggactggtcgtaccttgtgacttacgtaccaatcgt 23200517  T
Q  98 ggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagact 197  Q
    | ||||||||||||| |||||||||||||   |||  ||||| || |||| ||| ||||| |||||||  |||  | ||||||||||||| ||||| |||    
T  23200516 gacacgatttggaaa-tcgtgacacgattttatcagtggaagactggtatttaa-gtgtttttgtgcagattttgaagagagttggaagagagagaaact 23200419  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||||||||||||| | ||||||||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  23200418 tgggaaatcaaagggagcaactctagggtttaggg-tctttgattagagtttctcttgggttgggaaacattgtaaacaccttg 23200336  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 27352193 - 27352357
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||| ||||  |||||||||||| ||||||||||||  | ||| ||||||||     
T  27352193 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaattatcactgataaggactggtcataccttgggacggacgcaaatcgtga 27352292  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
    |||||||||| |||||||| ||||||||||||| |||||||||| ||||||  |||||||||||||    
T  27352293 cacgatttgg-aaatcgtggcacgattgcttcagaggaaggctaatatatattgtgttcttgtgca 27352357  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 40372368 - 40372532
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| ||   | ||| ||||||||     
T  40372368 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaatcgtgc 40372467  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
    |||||| ||| |||||||||||||||| ||||| |||||| ||||||||||  |||||||||||||    
T  40372468 cacgatctgg-aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgca 40372532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 7167770 - 7167606
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||| |||||||||||||   ||| ||||||||     
T  7167770 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcaaatcgtga 7167671  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
    |||||||| ||||||| || ||||||| ||||| |||||| ||||||||||  |||||||||||||    
T  7167670 cacgattt-gaaaatcatggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 7167606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 82; E-Value: 1e-38
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 28503431 - 28503619
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| ||||||||||||||||| |||  |||||||||||||||||||||| |||||||||||  ||| |||||||||   ||| ||||||||     
T  28503431 cgtggcacgatcttgggaaatcgtgacacaattcagaaacttgctcgttaagtatccctgataaggacttgtca-accttgggtcagacgcaaatcgtga 28503529  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||| |||| |||||||| ||||||||||||| |||||| ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  28503530 cacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttgaaggagagcttggaaga 28503619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 81; E-Value: 4e-38
Query Start/End: Original strand, 17 - 246
Target Start/End: Complemental strand, 7782603 - 7782375
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaat 114  Q
    ||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || | |||||||  | |||||  ||||||| |||||| |||||| |    
T  7782603 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtgccttgggacgaacgtaccaatcgtgacacgatctggaaa-t 7782505  T
Q  115 cgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagggtg 214  Q
    ||||||||||||   |||  ||| ||||||||| ||| |||||||||||||  ||||||||| |||||||||| ||||| |||||||||||||||||| |    
T  7782504 cgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggacagttggaagagagagaaacttgggaaatcaaagggag 7782406  T
Q  215 aaactctagggtttagggttctttgattagag 246  Q
     ||||||||| ||||| | |||||||||||||    
T  7782405 taactctaggttttagag-tctttgattagag 7782375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 80; E-Value: 2e-37
Query Start/End: Original strand, 1 - 107
Target Start/End: Original strand, 2671177 - 2671284
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||||     
T  2671177 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttgggttgtacgcaaatcgtga 2671276  T
Q  100 cacgattt 107  Q
    ||||||||    
T  2671277 cacgattt 2671284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 28501264 - 28501452
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||| |||||||||||  ||| |||||||||   ||| ||||| ||     
T  28501264 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtca-accttgggtcagacgcaaatcatga 28501362  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||| |||| |||||||| ||||||||||||| |||||| ||||||||||  |||| ||||||| | |||||||||||| ||||||||    
T  28501363 cacgatcttgggaaatcgtggcacgattgcttcagaggaagactagtatatattgtgtacttgtgcttttttgaaggagagcttggaaga 28501452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 71; E-Value: 4e-32
Query Start/End: Original strand, 111 - 289
Target Start/End: Original strand, 10208982 - 10209159
Alignment:
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggaga----gttggaagaaagagagacttgggaaatc 206  Q
    |||||||||||||||||   || |||||| ||||||  ||| |||||||||||||  ||||||| | |    |||||||||  |||||||||||||||||    
T  10208982 aaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagtaaaagaggttggaaga--gagagacttgggaaatc 10209078  T
Q  207 aaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||  || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  10209079 aaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 10209159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 800798 - 801081
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||| ||||||| ||||||||||||||||||||   ||||||||||||||||| ||| ||||||||| || || |  ||||||  | ||| |  ||||||    
T  800798 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggaatggtcgtttcttgggacgaacgcaccaatcgt 800897  T
Q  98 ggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagact 197  Q
    | ||||   |||||| |||||||||||||   |||   || ||||| ||| ||| |||||||||||||| ||||||||||||           ||| |||    
T  800898 gacacggcctggaaa-tcgtgacacgattttatcagtagagggctaatatttaa-gtgttcttgtgcatatttgaaggagag-----------agaaact 800984  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||||||||||||  ||||||||||||||||| || ||||||||||||  ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  800985 tgggaaatcaaaggaagaaactctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatca 801081  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 5258455 - 5258344
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| ||||| |||||||||||| |||||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  5258455 tttgaaggagagctagaagagagagaaacttgagaaatcaaagggagaaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 5258358  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  5258357 ttgtaaacaccttg 5258344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 177 - 281
Target Start/End: Complemental strand, 9636429 - 9636326
Alignment:
Q  177 gagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaaca 276  Q
    ||||||||||| ||||| |||||||||||||||||  |||||| |||||||||||| |||||||||||||| ||||||||||||  ||| || | |||||    
T  9636429 gagttggaagagagagaaacttgggaaatcaaaggaagaaactttagggtttaggg-tctttgattagagtctctcttgggttgggaaatattgtaaaca 9636331  T
Q  277 ccttg 281  Q
    |||||    
T  9636330 ccttg 9636326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 280
Target Start/End: Original strand, 37408149 - 37408426
Alignment:
Q  1 cgtggcacgatttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtg 98  Q
    ||||||||||||  | |||||||||||||||| | ||||||| | ||||||| | |  |||||||  || || |||||||||| |||||||  |||||||    
T  37408149 cgtggcacgattgtgtaaatcgtgacacgattttcaaacttgttggttaagttttcaggataaggt-tggtcgtaccttgggtcgtacgtatcaatcgtg 37408247  T
Q  99 gcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatcttt-gaaggagagttggaagaaagagagact 197  Q
    |||||||||||||| |||| ||| ||||   ||    |||| || |||||||| ||||||||||| |  ||| ||||| ||| | ||||| ||||| |||    
T  37408248 gcacgatttggaaa-tcgtaacaagattttatctgctgaagactggtatataa-gtgttcttgtgaagattttgaaggtgagcttgaagagagagaaact 37408345  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacacctt 280  Q
    ||||||||||||||  | |||| ||||||||| || |||||||||||||| ||||||||||||  |||||| | |||||||||    
T  37408346 tgggaaatcaaaggaggcaactttagggtttatgg-tctttgattagagt-tctcttgggttgggaaacattgtaaacacctt 37408426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 91 - 174
Target Start/End: Original strand, 22172884 - 22172967
Alignment:
Q  91 aaatcgtggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    ||||||||||||||||||| |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||| | |||||||    
T  22172884 aaatcgtggcacgatttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 22172967  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 22172774 - 22172899
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||| |||  |||||||||||| ||| ||||||| |     | ||||||||     
T  22172774 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaaggatctctgataaggactggtca-accttggttccgttgcaaatcgtga 22172872  T
Q  100 cacgatttggaaaatcgtgacacgatt 126  Q
    |||||||||| |||||||| |||||||    
T  22172873 cacgatttgggaaatcgtggcacgatt 22172899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 5260634 - 5260523
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  5260634 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 5260537  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  5260536 ttgtaaacaccttg 5260523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 106
Target Start/End: Original strand, 10208890 - 10208997
Alignment:
Q  1 cgtggcacgatttggg--aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtg 98  Q
    ||||||||||||| ||  |||||||||||||||   |||||||||||||||| |||||||||||||||||| || | |||||||  | ||| ||||||||    
T  10208890 cgtggcacgattttgggaaaatcgtgacacgatcaagaaacttgctcgttaaatatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 10208989  T
Q  99 gcacgatt 106  Q
     |||||||    
T  10208990 acacgatt 10208997  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 12 - 124
Target Start/End: Complemental strand, 1306479 - 1306366
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttgg 109  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||  ||||||||| | || ||||||| |  |||||||  ||||||| ||||| ||||    
T  1306479 ttgggaaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttgg 1306380  T
Q  110 aaaatcgtgacacga 124  Q
     ||||||||||||||    
T  1306379 -aaatcgtgacacga 1306366  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 1 - 173
Target Start/End: Complemental strand, 24968592 - 24968419
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||| ||  |||||||||||| ||| |||| |||      | ||||||||     
T  24968592 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-acctggggaccgttgcaaatcgtgc 24968494  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaa 173  Q
    |||||| | || |||||||| ||||||| |||||  | ||| ||||||| |||||||||||||||| | ||||||    
T  24968493 cacgatctagggaaatcgtggcacgatttcttcagggcaagactagtatttaaagtgttcttgtgcttatttgaa 24968419  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8512715 - 8512646
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  8512715 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 8512646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 8517595 - 8517526
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  8517595 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 8517526  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 18 - 126
Target Start/End: Complemental strand, 32143816 - 32143707
Alignment:
Q  18 aatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaatc 115  Q
    ||||||||||||||| | ||||||||||||||||| | |  ||||||||| | || ||||||| |  |||||||  ||||||| |||||||||| |||||    
T  32143816 aatcgtgacacgattttcaaacttgctcgttaagttttcaagataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatttgg-aaatc 32143718  T
Q  116 gtgacacgatt 126  Q
    |||||||||||    
T  32143717 gtgacacgatt 32143707  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 32475947 - 32475885
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcat 74  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||| ||||    
T  32475947 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat 32475885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 12 - 74
Target Start/End: Complemental strand, 32480805 - 32480743
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcat 74  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||| ||||    
T  32480805 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtcat 32480743  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 45095037 - 45095133
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| ||||||||||||||| |  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  45095037 gaagagagagaaacttgggaaatcaaaagaggcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 45095133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 2672543 - 2672600
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  2672543 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 2672600  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 18656904 - 18656847
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  18656904 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactg 18656847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #47
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 183 - 281
Target Start/End: Complemental strand, 5236752 - 5236656
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||| ||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  5236752 gaagagagagaaacttgggaaatcgaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 5236656  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #48
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 39153645 - 39153561
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  39153645 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 39153561  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #49
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 12 - 69
Target Start/End: Original strand, 2676699 - 2676756
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||||||||||||||||  |||||||||| |||||| |||  ||||||||||||    
T  2676699 ttgggaaatcgtgacacgattcagaaacttgctggttaagaatctctgataaggactg 2676756  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #50
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 40734355 - 40734466
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| | ||| |||||| ||||||||||    |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  40734355 tttgaaggagagcttgaagagacagaaacttggaaaatcaaaggagataactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 40734452  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  40734453 ttgtaaacaccttg 40734466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #51
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 168 - 260
Target Start/End: Original strand, 29812920 - 29813010
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttg 260  Q
    ||||||| |||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||    
T  29812920 tttgaagaagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttg 29813010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #52
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 189 - 260
Target Start/End: Original strand, 7762144 - 7762213
Alignment:
Q  189 agagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttg 260  Q
    ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  7762144 agagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 7762213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #53
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 9581167 - 9581251
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||    |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  9581167 acttgggaaatcaaaggagttaactttagggttaaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 9581251  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #54
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 19684173 - 19684089
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||    |||| ||||||| ||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  19684173 acttgggaaatcaaaggagttaactttagggttaagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 19684089  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #55
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 29810740 - 29810836
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||||||| | |||||||||||||||||  | || | ||||||| |||| |||||||||||||| ||| ||||||||  |||||| | ||||||||||    
T  29810740 gaagaaagaaaaacttgggaaatcaaaggaggtaattttagggttgaggg-tctttgattagagt-tcttttgggttgggaaacattgtaaacaccttg 29810836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #56
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 277
Target Start/End: Complemental strand, 32744710 - 32744630
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacac 277  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||    
T  32744710 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacac 32744630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #57
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 40735255 - 40735351
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| |||||||||||   |||||| | ||||||||||    
T  40735255 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttaggaaacattgtaaacaccttg 40735351  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #58
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 51398671 - 51398782
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| | ||| |||||||||||||||||  | |||| ||||||| || | |||||||||||||| | ||||||||||  ||| |    
T  51398671 tttgaaggagaggttgaagagatagaaacttgggaaatcaaaggaggtaactttagggttgagag-tctttgattagagt-tttcttgggttgggaaata 51398768  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  51398769 ttgtaaacaccttg 51398782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 182; Significance: 2e-98; HSPs: 46)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 182; E-Value: 2e-98
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 25689653 - 25689945
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||| || | |||||| ||||||  ||||||||     
T  25689653 cgtggcacgattgtgggaaatcgtcacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttggtttgtacacaaatcgtga 25689752  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggaga-gttggaagaaagagagactt 198  Q
    |||||||  ||||||||||||||||||||  || |||||||||||||| | |||||||||||||||||||||||| ||| ||||||||  ||||||||||    
T  25689753 cacgattgagaaaatcgtgacacgattgcaacagaggaaggctagtat-ttaagtgttcttgtgcatctttgaagaagaggttggaag--agagagactt 25689849  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25689850 gggaaatcaaagggagaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 25689945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 176; E-Value: 8e-95
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 3439200 - 3439494
Alignment:
Q  1 cgtggcacgatttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggc 100  Q
    |||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| | ||||||||    
T  3439200 cgtgacacgatttgggaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcatatcgtggc 3439299  T
Q  101 acgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttgga--agaaagagagact 197  Q
    |||||| ||||||||||||||||||| |  || |||||| ||||  |||||||||||||||||||  ||||||| ||||||||||  ||| |||||||||    
T  3439300 acgattgggaaaatcgtgacacgatttcaacagaggaagactag--tataaagtgttcttgtgcagatttgaagagagagttggaagagagagagagact 3439397  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    || |||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||    
T  3439398 tgagaaatcaaagggagaaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagaaaatca 3439494  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 289
Target Start/End: Complemental strand, 42575779 - 42575508
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| |||||||| ||||||| || ||||||    
T  42575779 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtctttccttgggacggacgcaaatcgtgacacgattgggcaaatcg 42575680  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-ga---gagttggaagaaagagagacttgggaaatcaaaggg 212  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||   ||||||||||  ||||||||||||||||||||||||    
T  42575679 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggagttggaag--agagagacttgggaaatcaaaggg 42575583  T
Q  213 tgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
      || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  42575582 -aaagctctagggtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 42575508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 97; E-Value: 1e-47
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 4759646 - 4759833
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||   | ||| ||||||||     
T  4759646 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatccttgataaggactggtcataccttggaacggacgcaaatcgtga 4759745  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||| ||| |||||||||||||||| ||||| |||||| ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  4759746 cacgatctgg-aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcttgtttgaaggagagcttggaaga 4759833  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18852739 - 18852926
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||| |||||||||||||   ||| | ||||||     
T  18852739 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggactggtcataccttgggtcagacgcagatcgtga 18852838  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||||||| |||||||| ||||||||||||| |||||| ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  18852839 cacgatttgg-aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgcttttttgaaggagagcttggaaga 18852926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 93; E-Value: 3e-45
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 30656170 - 30655983
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| ||| |||||||||   ||| ||||||||     
T  30656170 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcaaaccttgggtcagacgcaaatcgtga 30656071  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||| ||| |||||||| ||||||||||||| |||||| ||||||||||  |||||||||||  | |||||||||||| ||||||||    
T  30656070 cacgatctgg-aaatcgtggcacgattgcttcagaggaagactagtatatattgtgttcttgtgtttttttgaaggagagcttggaaga 30655983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 1261539 - 1261716
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttgg 109  Q
    ||||||||||||||||||||| | |||||||||||||||||||||||||||||||||| ||||||||||||   |||||  |||||||| |||||| |||    
T  1261539 ttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggactggtcataccttgggacatacgttcaaatcgtgacacgatctgg 1261638  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
     ||||||||||||||||   ||| |||||||||||||| |||||||||||||||| | |||||||||||| ||||||||    
T  1261639 -aaatcgtgacacgattttatcagaggaaggctagtatttaaagtgttcttgtgcttttttgaaggagagcttggaaga 1261716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 92; E-Value: 1e-44
Query Start/End: Original strand, 1 - 163
Target Start/End: Complemental strand, 36979902 - 36979741
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||  |||||||||||| ||||||||||||||||||| ||||||||     
T  36979902 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactggtcataccttgggttgtacgcaaatcgtga 36979803  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtg 163  Q
    |||||| ||| |||||||| ||||||||||||| |||||||||||||| | |||||||||||||    
T  36979802 cacgatctgg-aaatcgtggcacgattgcttcagaggaaggctagtat-ttaagtgttcttgtg 36979741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 88; E-Value: 3e-42
Query Start/End: Original strand, 11 - 295
Target Start/End: Original strand, 2627442 - 2627725
Alignment:
Q  11 tttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttg 108  Q
    ||||||||||||||||||||||   ||||||||||||||||| ||| ||||||||| || || |  |||| |  ||||| |  | | ||| |||||| ||    
T  2627442 tttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggattggtcgtttcttgtgacgtacgcaccatttgtgacacgatctg 2627541  T
Q  109 gaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaa 208  Q
     ||| |||||||||||||   ||   ||| ||||||||| ||| |||||||||||||  |||||||||||||||||||| ||||| ||||||||||||||    
T  2627542 taaa-tcgtgacacgattttatcgttggagggctagtatttaa-gtgttcttgtgcagatttgaaggagagttggaagagagagaaacttgggaaatcaa 2627639  T
Q  209 agggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||| | ||||||||||||||| | |||||||||||||  ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  2627640 agggagtaactctagggtttagag-tctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatca 2627725  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 18870133 - 18870320
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  | |||||||||| |||||||||||||   ||| | ||||||     
T  18870133 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggactggtcataccttgggtcagacgcagatcgtga 18870232  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||||| |||||||||| ||||||||||||| || ||| ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  18870233 cacgattt-gaaaatcgtggcacgattgcttcagagaaagactagtatatattgtgttcttgtgcttttttgaaggagagcttggaaga 18870320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 189 - 289
Target Start/End: Original strand, 15290410 - 15290508
Alignment:
Q  189 agagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagag 288  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  15290410 agagagacttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagag 15290507  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 69; E-Value: 6e-31
Query Start/End: Original strand, 189 - 289
Target Start/End: Original strand, 15470779 - 15470877
Alignment:
Q  189 agagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagag 288  Q
    ||||||||||||||||||||||||  || ||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| ||||    
T  15470779 agagagacttgggaaatcaaaggga-aagctctagggtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagag 15470876  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 7289552 - 7289728
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgat-ttgga 110  Q
    |||| ||||||||||||||||  |||||||||||||||||||||| |||||||||||  || |||||||| |   | | |||||||| |||||| ||||     
T  7289552 ttggaaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggacttgtc-taccttggatcagatgcaaatcgtgacacgatcttggg 7289650  T
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||| | |||||| ||||| ||||||||    
T  7289651 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaaagagagcttggaaga 7289728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 10688711 - 10688899
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  | |||||||||  ||| |||||||||   | | ||||||||     
T  10688711 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtca-accttgggtcagatgcaaatcgtga 10688809  T
Q  100 cacgatt-tggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    ||||||| ||| |||||||| ||| ||| ||||| |||||| ||||||||||  |||||||||||||  |||||| ||||| ||||||||    
T  10688810 cacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgcagttttgaaagagagcttggaaga 10688899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 58; E-Value: 2e-24
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 6311823 - 6311659
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  | |||||||||  ||| |||||||||   | | ||||||||     
T  6311823 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactaataaggacttgtca-accttgggtcagatgcaaatcgtga 6311725  T
Q  100 cacgatt-tggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    ||||||| ||| |||||||| ||| ||| ||||| |||||| ||||||||||  ||||||||||||    
T  6311724 cacgattgtgggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttgtgc 6311659  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 17982510 - 17982621
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  17982510 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 17982607  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  17982608 ttgtaaacaccttg 17982621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 10683851 - 10683920
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  ||||||||||||    
T  10683851 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatctctgataaggactg 10683920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 3 - 174
Target Start/End: Original strand, 25327778 - 25327950
Alignment:
Q  3 tggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggca 101  Q
    ||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  ||| |||||||||     | |  ||||| ||    
T  25327778 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggtccgttgcagctcgtgaca 25327876  T
Q  102 cgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||| | || |||||||| ||||||| |||||  ||||| ||||||||||  |||||||||||| | |||||||    
T  25327877 cgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 25327950  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 31218114 - 31218225
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| |||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  31218114 tttgaagaagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 31218211  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  31218212 ttgtaaacaccttg 31218225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 26288392 - 26288239
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttgg 109  Q
    ||||||||||||||||| ||| | ||||||||||||||||| ||| |||||||||||| || ||||||| |  ||||||   ||| ||| |||||  |||    
T  26288392 ttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgtacgttccaatagtgtcacgacctgg 26288293  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
     ||||||||||||||||   |||  ||||||||||||| | |||||||||||||||    
T  26288292 -aaatcgtgacacgattttatcagtggaaggctagtat-ttaagtgttcttgtgca 26288239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 26301649 - 26301496
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttgg 109  Q
    ||||||||||||||||| ||| | ||||||||||||||||| ||| |||||||||||| || ||||||| |  ||||||   ||| ||| |||||  |||    
T  26301649 ttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgtacgttccaatagtgtcacgacctgg 26301550  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
     ||||||||||||||||   |||  ||||||||||||| | |||||||||||||||    
T  26301549 -aaatcgtgacacgattttatcagtggaaggctagtat-ttaagtgttcttgtgca 26301496  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 26313643 - 26313490
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttgg 109  Q
    ||||||||||||||||| ||| | ||||||||||||||||| ||| |||||||||||| || ||||||| |  ||||||   ||| ||| |||||  |||    
T  26313643 ttgggaaatcgtgacacaattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgtacgttccaatagtgtcacgacctgg 26313544  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
     ||||||||||||||||   |||  ||||||||||||| | |||||||||||||||    
T  26313543 -aaatcgtgacacgattttatcagtggaaggctagtat-ttaagtgttcttgtgca 26313490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 34254639 - 34254549
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttg 260  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||    
T  34254639 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctcttgggttg 34254549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 43; E-Value: 0.000000000000002
Query Start/End: Original strand, 12 - 106
Target Start/End: Original strand, 33037411 - 33037505
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatt 106  Q
    |||||||||||||||||||||  ||||||||||| |||||||||  |||||||||||| |||| ||||||   | ||| |||||||| |||||||    
T  33037411 ttgggaaatcgtgacacgattcagaaacttgctcattaagtatcactgataaggactggtcatgccttggaacggacgcaaatcgtgacacgatt 33037505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 1746529 - 1746418
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| |||| ||||||| ||||| |||||||||||||||||  | |||| |||||||||||| || ||||||||||| |||||| |||||  |||||    
T  1746529 tttgaagaagagctggaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tccttgattagagt-tctctttggttgggaaaca 1746432  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  1746431 ttgtaaacaccttg 1746418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 12702949 - 12702838
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | || | ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  12702949 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaaatttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 12702852  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  12702851 ttgtaaacaccttg 12702838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 15212643 - 15212754
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| ||||||||||||||| |  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  15212643 tttgaaggagagcttgaagagagagaaacttgggaaatcaaatgaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 15212740  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  15212741 ttgtaaacaccttg 15212754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 15290273 - 15290362
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatt 106  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| |  | |||||||  | ||| |||||||| |||||||    
T  15290273 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggacggacgcaaatcgtgacacgatt 15290362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 15470642 - 15470731
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatt 106  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| |  | |||||||  | ||| |||||||| |||||||    
T  15470642 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtagttccttgggacggacgcaaatcgtgacacgatt 15470731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 277
Target Start/End: Original strand, 30143199 - 30143306
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  30143199 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 30143296  T
Q  268 tgggaaacac 277  Q
    | | ||||||    
T  30143297 ttgtaaacac 30143306  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 33352007 - 33352118
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| ||||||| ||||| ||||||||||||||||   | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  33352007 tttgaaggtgaggtggaagagagagaaacttgggaaatcaaagaaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 33352104  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  33352105 ttgtaaacaccttg 33352118  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 34256815 - 34256705
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||||||| | |||||||||||||||||  | |||| |||||||||||| |||||||||||||| | ||||||||||  |||||    
T  34256815 tttgaaggagagcttgaagaaagataaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tatcttgggttg-gaaaca 34256719  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  34256718 ttgtaaacaccttg 34256705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 35745866 - 35745797
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  35745866 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctatgataaggactg 35745797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 43036280 - 43036391
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||| ||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  43036280 tttgaatgagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 43036377  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  43036378 ttgtaaacaccttg 43036391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 39784437 - 39784611
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||| | ||||||||||  |||||||||||| ||| |||| |||      | | ||||||     
T  39784437 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatcactgataaggactggtca-acctggggaccgttgcagatcgtga 39784535  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||||||| |||||  ||||| ||||||||||  |||||||||||| | |||||||    
T  39784536 cacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 39784611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 17 - 124
Target Start/End: Original strand, 31043017 - 31043125
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaat 114  Q
    |||||||||||||||| | ||||||||||||||||| |||  ||||||||| | || ||||||| |  |||||||  ||||||| ||||| |||| ||||    
T  31043017 aaatcgtgacacgattctcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttgg-aaat 31043115  T
Q  115 cgtgacacga 124  Q
    ||||||||||    
T  31043116 cgtgacacga 31043125  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 19945671 - 19945560
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||| | |||||||||||||||||  | |||| |||||||||| | |||||||||||||| |||||||||| |  |||||    
T  19945671 tttgaaggagagcttgaagagagacaaacttgggaaatcaaaggaagcaactttagggtttagag-tctttgattagagt-tctcttgggtcgggaaaca 19945574  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  19945573 ttgtaaacaccttg 19945560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #38
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 27811135 - 27811246
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||||| || ||||||| ||||| | |||||||||||||||  | || | ||||||| |||| |||||||||||||| |||||| ||||| ||||||    
T  27811135 tttgaaggaaagctggaagagagagaaaattgggaaatcaaaggaggtaaatttagggttgaggg-tctttgattagagt-tctcttaggttggaaaaca 27811232  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  27811233 ttgtaaacaccttg 27811246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #39
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 111 - 187
Target Start/End: Original strand, 33037490 - 33037567
Alignment:
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||||||||||||||||||| | | || ||||||||||  |||||||||||| | |||||||||||| ||||||||    
T  33037490 aaatcgtgacacgattgcttcagaaggagactagtatatattgtgttcttgtgcttttttgaaggagagcttggaaga 33037567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #40
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 42498051 - 42498162
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  ||||     
T  42498051 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttgggaaacg 42498148  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  42498149 ttgtaaacaccttg 42498162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 44303711 - 44303822
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||| ||||| | ||||| ||||| ||||| |||||||||||    |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  44303711 tttgaaagagagcttgaagagagagaaacttgagaaatcaaaggaaacaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 44303808  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  44303809 ttgtaaacaccttg 44303822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #42
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 4733664 - 4733777
Alignment:
Q  168 tttgaaggagagttggaagaaagagaga--cttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaa 265  Q
    |||||||||||| | ||||| |||||||  |||||||||||||| |  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||    
T  4733664 tttgaaggagaggttgaagagagagagaaacttgggaaatcaaaagaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaa 4733761  T
Q  266 catgggaaacaccttg 281  Q
    ||| | ||||||||||    
T  4733762 cattgtaaacaccttg 4733777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #43
Raw Score: 36; E-Value: 0.00000000003
Query Start/End: Original strand, 168 - 247
Target Start/End: Complemental strand, 19948632 - 19948554
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagt 247  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||| | ||||||||||||||    
T  19948632 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttagag-tctttgattagagt 19948554  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #44
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 4731515 - 4731626
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||| | | ||||| ||||| |||||  ||||||||||  | |||| ||||||| ||||| ||||||||||||| ||||||||||||  |||||    
T  4731515 tttgaaggagcggttgaagagagagaaacttgaaaaatcaaaggaggtaactttagggttgagggt-ctttgattagagt-tctcttgggttgggaaaca 4731612  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  4731613 ttgtaaacaccttg 4731626  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #45
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 6598856 - 6598940
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||    |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  6598856 acttgggaaatcaaaggagataactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 6598940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #46
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 6674309 - 6674393
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||    |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  6674309 acttgggaaatcaaaggagataactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 6674393  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 163; Significance: 4e-87; HSPs: 49)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 2 - 295
Target Start/End: Original strand, 16554567 - 16554859
Alignment:
Q  2 gtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggc 100  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| | |||||| |    
T  16554567 gtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgac 16554666  T
Q  101 acgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttga--aggagagttggaagaaagagagactt 198  Q
    ||||||||| |||||||||||||||| |  || |||||||||||  |||||| ||||||||||||  |||||  || |||||||||||  ||||||||||    
T  16554667 acgatttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaattgttcttgtgcagatttgaagagaagagttggaagtgagagagactt 16554764  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16554765 ggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 16554859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 163; E-Value: 4e-87
Query Start/End: Original strand, 2 - 295
Target Start/End: Original strand, 16631123 - 16631415
Alignment:
Q  2 gtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggc 100  Q
    |||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| | |||||| |    
T  16631123 gtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtgac 16631222  T
Q  101 acgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttga--aggagagttggaagaaagagagactt 198  Q
    ||||||||| |||||||||||||||| |  || |||||||||||  |||||| ||||||||||||  |||||  || |||||||||||  ||||||||||    
T  16631223 acgatttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaattgttcttgtgcagatttgaagagaagagttggaagtgagagagactt 16631320  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16631321 ggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 16631415  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 16578989 - 16578696
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| | ||||||     
T  16578989 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtga 16578890  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-ga-gagttggaagaaagagagact 197  Q
    |||||||||| |||||||||||||||| |  || ||||||| |||  |||||| ||||||||||||  ||||||| || ||||||||||  |||||||||    
T  16578889 cacgatttgggaaatcgtgacacgatttcaacagaggaagggtag--tataaattgttcttgtgcagatttgaagagaggagttggaagtgagagagact 16578792  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  16578791 tggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacacgttgtaaagagagaatca 16578696  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 155; E-Value: 3e-82
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 16616391 - 16616684
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| | ||||||     
T  16616391 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtga 16616490  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-ga-gagttggaagaaagagagact 197  Q
    |||||||||| |||||||||||||||| |  || ||||||| |||  |||||| ||||||||||||  ||||||| || ||||||||||  |||||||||    
T  16616491 cacgatttgggaaatcgtgacacgatttcaacagaggaagggtag--tataaattgttcttgtgcagatttgaagagaggagttggaagtgagagagact 16616588  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||| |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||    
T  16616589 tggggaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacacgttgtaaagagagaatca 16616684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 16652809 - 16653102
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||| ||||||||||||| ||||||||| || ||||||||||||||||||||||||||||||||||||| || |  ||||||| ||||| | ||||||     
T  16652809 cgtggaacgatttgggaaaatcgtgacacaatcgtgaaacttgctcgttaagtatccttgataaggactggtcgtttcttgggtggtacgcagatcgtga 16652908  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttga--aggagagttggaagaaagagagact 197  Q
    |||||||||| |||||||||||||||| |  || |||||||||||  |||||| ||||||||||||  |||||  || |||||||||||  |||||||||    
T  16652909 cacgatttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaattgttcttgtgcagatttgaagagaagagttggaagtgagagagact 16653006  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||  |||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  16653007 tggagaatcaaaggg-gcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 16653102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 25421020 - 25421295
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| |||||||| || |||| |||||||||    
T  25421020 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacatgattgggaaaatcg 25421119  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gaga-gttggaagaaagagagacttgggaaatcaaagggtg 214  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  |||||||  ||| ||||||||  |||||||||||||||||||||||| |    
T  25421120 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagaaagaggttggaag--agagagacttgggaaatcaaaggg-g 25421215  T
Q  215 aaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  25421216 aagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 25421295  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 6026946 - 6027232
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| ||||||||||||   ||||||||||||||||||||||||||||||||| | || | |||||||  | ||| ||||||||     
T  6026946 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaatcgtga 6027045  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gaga-gttggaagaaagagagact 197  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| |||| ||||||||  |||||||||    
T  6027046 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaag--agagagact 6027142  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  6027143 tgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 6027232  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 131; E-Value: 6e-68
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 33342576 - 33342289
Alignment:
Q  1 cgtggcacgattt--gggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtg 98  Q
    |||||||||||||  ||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||    
T  33342576 cgtggcacgatttctgggaaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtg 33342477  T
Q  99 gcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gag-agttggaagaaagagagac 196  Q
     ||||||| || |||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| | |||||||  ||||||||    
T  33342476 acacgattgggcaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaatttggaag--agagagac 33342380  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  33342379 ttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 33342289  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 123; E-Value: 3e-63
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 34166796 - 34167064
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  ||||| |||||||| ||||||| || ||||||    
T  34166796 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacgtacgcaaatcgtgacacgattgggcaaatcg 34166895  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| |||| |||  |||||||||||||||||||||||| ||    
T  34166896 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaag--agagagacttgggaaatcaaaggg-ga 34166991  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  34166992 agctctagagtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 34167064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 34164574 - 34164842
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| |||||||| ||||||| |  ||||||    
T  34164574 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattggacaaatcg 34164673  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| |||| |||  |||||||||||||||||||||||| ||    
T  34164674 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagggttgaaag--agagagacttgggaaatcaaaggg-ga 34164769  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | |||||| |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||| |||||    
T  34164770 agctctagagtttagggttctttgattagagtacctcttgggttg-aaaacatgggaaacaccttgtagagaga 34164842  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 113 - 289
Target Start/End: Original strand, 27647673 - 27647847
Alignment:
Q  113 atcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    ||||||||||||||||   | |||||| ||||||||  |||||||||||||||  ||||||| ||||||||||||| |||||||||||||||||||||||    
T  27647673 atcgtgacacgattgcaatagaggaagactagtata--aagtgttcttgtgcagatttgaagagagagttggaagagagagagacttgggaaatcaaagg 27647770  T
Q  212 gtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    | ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||||    
T  27647771 gagaaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccatgtagagaga 27647847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 15 - 295
Target Start/End: Complemental strand, 3073215 - 3072938
Alignment:
Q  15 ggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaa 112  Q
    ||||||||||||||||||   ||||||||||||||||| ||| |||||||||||| |||||||||||| || | | |  ||||||  |||||| ||||||    
T  3073215 ggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggatggatgcactaatcgttacacgatctggaaa 3073116  T
Q  113 atcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaaggg 212  Q
     |||||||||||||   |||  ||| ||||||||| ||| |||||||||||||  |||| | |||||||||||||  |||| ||||||||||||||||||    
T  3073115 -tcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttggaagagagttggaaga--gagaaacttgggaaatcaaaggg 3073020  T
Q  213 tgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
     ||||||||||||||||| || ||||||||||||  ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  3073019 agaaactctagggtttagagt-ctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatca 3072938  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 101; E-Value: 4e-50
Query Start/End: Original strand, 12 - 187
Target Start/End: Original strand, 5674354 - 5674529
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaa 111  Q
    ||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||| ||||||||||||  ||||| |||||||| |||||| ||| |    
T  5674354 ttgggaaatcgtgacacgattttgaaacttgctcgttaagtatccgtgataaggactggtcataccttgggacgtacgcaaatcgtgacacgatctgg-a 5674452  T
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    ||||||||||||||||  ||| |||||||||||||| |||||||||||||||||  |||| ||||||| ||||||||    
T  5674453 aatcgtgacacgattgtatcagaggaaggctagtatttaaagtgttcttgtgcagatttggaggagagcttggaaga 5674529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 96; E-Value: 4e-47
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 411798 - 412091
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtg-aaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcg 96  Q
    |||| ||||||| ||||||||||||||||||||||| ||||||||||||||||| ||| |||||||||||| ||||||||||||  | | | |  |||||    
T  411798 cgtgacacgattgtgggaaatcgtgacacgattgtgcaaacttgctcgttaagtttccatgataaggactggtcataccttgggacggatgcaccaatcg 411897  T
Q  97 tggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagac 196  Q
    || ||| ||  ||||| |||||||||||||   |||  |||||||  |||| ||| |||||||||||||  |||||||| ||||||||||| ||||| ||    
T  411898 tgacacaatcaggaaa-tcgtgacacgattttatcagtggaaggcatgtatttaa-gtgttcttgtgcagatttgaagg-gagttggaagagagagaaac 411994  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||| |||||||||||| | ||||||||||||||| | |||||||||||||  |||||||||||| |||||||||||||||||||| | ||||| |||||    
T  411995 ttgagaaatcaaagggagtaactctagggtttagag-tctttgattagagcttctcttgggttg-aaaacatgggaaacaccttgaagagagaaaatca 412091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 112 - 281
Target Start/End: Complemental strand, 2171897 - 2171730
Alignment:
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    |||||||||||||||   |||  ||||||||||||| ||| |||||||||||||  |||||||| ||| | ||||| ||||| |||||||||||||||||    
T  2171897 aatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagatttgaaggtgagctagaagagagagaaacttgggaaatcaaagg 2171799  T
Q  212 gtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    | | ||||||||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  2171798 gagcaactctagggtttaggg-tctttgattagagtttctcttgggttgggaaacattgtaaacaccttg 2171730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 112 - 281
Target Start/End: Complemental strand, 6097800 - 6097632
Alignment:
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    |||||||||||||||   |||  ||||| ||||||| ||| |||||||||||||  |||||||| |||   | ||| ||||| |||||||||||||||||    
T  6097800 aatcgtgacacgattttatcaggggaagactagtatttaa-gtgttcttgtgcagatttgaaggtgagagagtagagagagaaacttgggaaatcaaagg 6097702  T
Q  212 gtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    | | ||||||||||||||||||||||||||||||||||||||| |||||  |||||||| ||||||||||    
T  6097701 gagcaactctagggtttagggttctttgattagagtatctctttggttgggaaacatggtaaacaccttg 6097632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 74; E-Value: 6e-34
Query Start/End: Original strand, 1 - 125
Target Start/End: Original strand, 25420909 - 25421034
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  25420909 cgtggcacgatttgggaaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 25421008  T
Q  100 cacgatttggaaaatcgtgacacgat 125  Q
    || |||| ||||||||||||||||||    
T  25421009 catgattgggaaaatcgtgacacgat 25421034  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 65; E-Value: 1e-28
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 11857455 - 11857292
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||| |  |||||||||||  ||| |||||||||     | ||||||||     
T  11857455 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtaacactgataaggacttgtca-accttgggtccgttgcaaatcgtga 11857357  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||||||| |||||||| ||||||| ||||| |||||| ||||||||||  ||||||||||||    
T  11857356 cacgatttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgc 11857292  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 64; E-Value: 5e-28
Query Start/End: Original strand, 1 - 127
Target Start/End: Complemental strand, 6136435 - 6136308
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | | | ||||||||     
T  6136435 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggaagcaaatcgtga 6136336  T
Q  100 cacgatttggaaaatcgtgacacgattg 127  Q
    ||| ||| ||||||||||||||||||||    
T  6136335 cacaattgggaaaatcgtgacacgattg 6136308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 57; E-Value: 8e-24
Query Start/End: Original strand, 1 - 80
Target Start/End: Complemental strand, 5266560 - 5266480
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttg 80  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||    
T  5266560 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttg 5266480  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 22010301 - 22010475
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  || ||||||||||     | ||||||||     
T  22010301 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcaaatcgtga 22010399  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||||||| ||||| ||| || ||||||||||  |||||||||||| | |||||||    
T  22010400 cacgatctagggaaatcgtggcacgatttcttcagagggagactagtatatattgtgttcttgtgcttttttgaag 22010475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 31404985 - 31404873
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||||  |||||||||||| |||||||||||| ||||||    
T  31404985 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttagggtcttttgattagagt-tctcttgggttggaaaaca 31404887  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  31404886 ttgtaaacaccttg 31404873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 16839218 - 16839054
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||| ||| ||||||||      | | ||||||     
T  16839218 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactggtca-accttgggaccgttgcagatcgtga 16839120  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||| | || |||||||||||||||| |||||  | | | ||||||||||||||||||||||||    
T  16839119 cacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgc 16839054  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 12 - 126
Target Start/End: Complemental strand, 22709520 - 22709405
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttgg 109  Q
    ||||||||||||||||||||| | ||||||||||||||||| ||| |||||||||||| || ||||||| |  |||| |  |||||||| ||||| ||||    
T  22709520 ttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgtgacgtacatacaaatcgtgacacgacttgg 22709421  T
Q  110 aaaatcgtgacacgatt 126  Q
     ||||||||||||||||    
T  22709420 -aaatcgtgacacgatt 22709405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 47; E-Value: 7e-18
Query Start/End: Original strand, 1 - 62
Target Start/End: Original strand, 27647580 - 27647642
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgata 62  Q
    |||||||||||| || |||||||||||||||| ||||||||||||||||||||||||||||||    
T  27647580 cgtggcacgattgtgagaaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgata 27647642  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 13150979 - 13151068
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatt 106  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| |||||||| |||||||    
T  13150979 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgatt 13151068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14737178 - 14737342
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||  |||||||||||  ||| |||||||||     | | ||||||     
T  14737178 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggtccgttgcagatcgtga 14737276  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||| | || |||||||| ||||||| |||||  ||||| ||||||||||  ||||||||||||    
T  14737277 cacgatctagggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 14737342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 168 - 279
Target Start/End: Complemental strand, 30834847 - 30834738
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| ||||| |||||||||||  | |||| ||||||||| || |||||||||||||| ||||||||||||| |||||    
T  30834847 tttgaaggagagcttgaagagagagaaacttgagaaatcaaaggaagcaactttagggtttatgg-tctttgattagagt-tctcttgggttgagaaaca 30834750  T
Q  268 tgggaaacacct 279  Q
    | | ||||||||    
T  30834749 ttgtaaacacct 30834738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 5406509 - 5406398
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||| ||||||  |||||    
T  5406509 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctctcgggttgggaaaca 5406412  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  5406411 ttgtaaacaccttg 5406398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 5410834 - 5410723
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||| ||||||  |||||    
T  5410834 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctctcgggttgggaaaca 5410737  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  5410736 ttgtaaacaccttg 5410723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #31
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6005894 - 6005825
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  6005894 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 6005825  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #32
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 6438971 - 6438902
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  6438971 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctagttaagtatcactgataaggactg 6438902  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #33
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 9183342 - 9183231
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| |||| |||||||  |||||    
T  9183342 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcctgggttgggaaaca 9183245  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  9183244 ttgtaaacaccttg 9183231  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #34
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 14742038 - 14742202
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||  |||||||||||  ||| |||||||||     | | ||||||     
T  14742038 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggtccgttgcagatcgtga 14742136  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||| |  | |||||||| ||||||| |||||  ||||| ||||||||||  ||||||||||||    
T  14742137 cacgatctaaggaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgc 14742202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #35
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 16452640 - 16452529
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| ||||||||||||||||   | |||| ||| |||||||| |||||||||||||| ||||||||||||| |||||    
T  16452640 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaagtaagcaactttagagtttaggg-tctttgattagagt-tctcttgggttgagaaaca 16452543  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  16452542 ttgtaaacaccttg 16452529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #36
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33330045 - 33330114
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  33330045 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 33330114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #37
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 33335542 - 33335611
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  33335542 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 33335611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #38
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 12 - 80
Target Start/End: Complemental strand, 2171979 - 2171911
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttg 80  Q
    ||||||||||||||||||||||| ||||||||||||||||| |||  ||||||||| | || |||||||    
T  2171979 ttgggaaatcgtgacacgattgtaaaacttgctcgttaagtttccaagataaggacaggtcgtaccttg 2171911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #39
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 1 - 55
Target Start/End: Original strand, 30125130 - 30125185
Alignment:
Q  1 cgtggcacgattt-gggaaatcgtgacacgattgtgaaacttgctcgttaagtatc 55  Q
    ||||||||||||| |||||||||||||||||||  |||||||||||||||||||||    
T  30125130 cgtggcacgattttgggaaatcgtgacacgattcagaaacttgctcgttaagtatc 30125185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #40
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 28155183 - 28155356
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| ||||||||||||||||||||   |||||||||| ||||||||||  |||||||||||| ||| |||| |||      | | ||||||     
T  28155183 cgtggcacgatcttgggaaatcgtgacacgatccagaaacttgctggttaagtatctctgataaggactggtca-acctggggaccgttgcagatcgtga 28155281  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaa 173  Q
    |||||| | || |||||||||||||||| |||||  ||| | ||||||||||  |||||||||||| | ||||||    
T  28155282 cacgatctagggaaatcgtgacacgatttcttcaggggaggactagtatatattgtgttcttgtgcttttttgaa 28155356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #41
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 5343940 - 5343883
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  5343940 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 5343883  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #42
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 5413703 - 5413596
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||| ||||||  |||||    
T  5413703 tttgaaggtgagcttgaagatagagaaacttgggaaatcaaaggaggcaactttagggtttaggg-tctttgattagagt-tctctcgggttgggaaaca 5413606  T
Q  268 tgggaaacac 277  Q
    | | ||||||    
T  5413605 ttgtaaacac 5413596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #43
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 17 - 82
Target Start/End: Complemental strand, 6097877 - 6097812
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttggg 82  Q
    ||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || ||||| |||    
T  6097877 aaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtacctgggg 6097812  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #44
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 26253698 - 26253808
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaat 114  Q
    |||||||||||||||| | ||||||||| ||||||| | |  ||||||||||| || ||| ||| |  |||||||  ||||||| |||||||||| ||||    
T  26253698 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtactttgtgacgtacgtatcaatcgtgacacgatttgg-aaat 26253796  T
Q  115 cgtgacacgatt 126  Q
    |||| |||||||    
T  26253797 cgtggcacgatt 26253808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #45
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 162
Target Start/End: Complemental strand, 5266469 - 5266418
Alignment:
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgt 162  Q
    |||||||||||||||||||||| |||||| |||||||||   ||||||||||    
T  5266469 aaatcgtgacacgattgcttcagaggaagactagtatattttgtgttcttgt 5266418  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #46
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 170 - 281
Target Start/End: Complemental strand, 33211494 - 33211385
Alignment:
Q  170 tgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatg 269  Q
    |||||||||  | ||||| ||||| |||||||||||||||||  | |||| ||  ||| |||| |||||||||||||| ||||||||||||  ||||||     
T  33211494 tgaaggagaagttgaagagagagaaacttgggaaatcaaaggaggtaactttacagttgaggg-tctttgattagagt-tctcttgggttgggaaacatt 33211397  T
Q  270 ggaaacaccttg 281  Q
    | ||||||||||    
T  33211396 gtaaacaccttg 33211385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #47
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 33160665 - 33160553
Alignment:
Q  168 tttgaaggagagttggaagaaagagaga-cttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaac 266  Q
    ||||| |||||| ||||||| ||||| | |||||| |||||||||  | |||| ||||||| || || ||||||||||||| ||||||||||||  ||||    
T  33160665 tttgatggagagctggaagagagagaaaacttggggaatcaaaggaggtaactttagggttgagagt-ctttgattagagt-tctcttgggttgggaaac 33160568  T
Q  267 atgggaaacaccttg 281  Q
    || | ||||||||||    
T  33160567 attgtaaacaccttg 33160553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #48
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 14737174 - 14737210
Alignment:
Q  91 aaatcgtggcacgat-ttggaaaatcgtgacacgatt 126  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14737174 aaatcgtggcacgatcttggaaaatcgtgacacgatt 14737210  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #49
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 126
Target Start/End: Original strand, 14742034 - 14742070
Alignment:
Q  91 aaatcgtggcacgat-ttggaaaatcgtgacacgatt 126  Q
    ||||||||||||||| |||||||||||||||||||||    
T  14742034 aaatcgtggcacgatcttggaaaatcgtgacacgatt 14742070  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0137 (Bit Score: 146; Significance: 6e-77; HSPs: 1)
Name: scaffold0137
Description:

Target: scaffold0137; HSP #1
Raw Score: 146; E-Value: 6e-77
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 5989 - 6258
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    ||||||||||||||| ||||||||||||||||||||||||||||||||||||| || | |||||||  | ||| |||||||| ||||||| |||||||||    
T  5989 aaatcgtgacacgatcgtgaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtgacacgattgggaaaatcg 6088  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||| ||||||||| |||||||||||||||||||||||| |     
T  6089 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagag-gttggaagagagagagacttgggaaatcaaaggg-gc 6185  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  6186 aactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 6258  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 145; Significance: 2e-76; HSPs: 41)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 145; E-Value: 2e-76
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 7122379 - 7122672
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  7122379 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 7122478  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gaga--gttggaagaaagagagac 196  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| ||||  |||| |||  ||||||||    
T  7122479 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaaggttgaaag--agagagac 7122575  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    |||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||    
T  7122576 ttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagagagaatca 7122672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 1 - 289
Target Start/End: Original strand, 8393094 - 8393380
Alignment:
Q  1 cgtggcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||||||||||| ||||||||||||   |||||||||||||||||||||| |||||||||||| || |  ||||||| ||||| | ||||||     
T  8393094 cgtggcacgatttgggaaaatcgtgacacgatccagaaacttgctcgttaagtatccgtgataaggactggtcttttcttgggtggtacgcagatcgtga 8393193  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag---gagagttggaagaaagagagac 196  Q
    |||||||||| |||||||||||||||| |  || |||||||||||  |||||||||||||||||||  |||||||   ||| ||||||||  ||||||||    
T  8393194 cacgatttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaagtgttcttgtgcagatttgaagagagagggttggaag--agagagac 8393289  T
Q  197 ttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
     ||||||||||||||| ||| |||||||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  8393290 ctgggaaatcaaaggg-gaagctctagggtttatggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 8393380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 137; E-Value: 1e-71
Query Start/End: Original strand, 5 - 289
Target Start/End: Original strand, 8395307 - 8395589
Alignment:
Q  5 gcacgatttgggaaa-tcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacg 103  Q
    ||||||||||||||| ||||||||| ||   |||||||||||||||||||||| |||||||||||| || |  ||||||| ||||| | |||||| ||||    
T  8395307 gcacgatttgggaaaatcgtgacacaatccagaaacttgctcgttaagtatccgtgataaggactggtcgtttcttgggtggtacgcagatcgtgacacg 8395406  T
Q  104 atttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag---gagagttggaagaaagagagacttgg 200  Q
    |||||| |||||||||||||||| |  || |||||||||||  |||||||||||||||||||  |||||||   ||| ||||||||  ||||||||||||    
T  8395407 atttgggaaatcgtgacacgatttcaacagaggaaggctag--tataaagtgttcttgtgcagatttgaagagagagggttggaag--agagagacttgg 8395502  T
Q  201 gaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  8395503 gaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 8395589  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 5135779 - 5136049
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||| | || | |||||||  | ||| |||||||| ||||||| |  ||||||    
T  5135779 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaatcgtgacacgattggacaaatcg 5135878  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gagag-ttggaagaaagagagacttgggaaatcaaagggtg 214  Q
    |||||||||||   || |||||| ||||||  ||| |||||||||||||  ||||||| ||||| ||||||||  |||| |||||||||||||||||| |    
T  5135879 tgacacgattggaacagaggaagactagtacttaa-gtgttcttgtgcagatttgaagagagaggttggaaga--gagaaacttgggaaatcaaaggg-g 5135974  T
Q  215 aaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||    
T  5135975 aagctctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaataccttgtagagaga 5136049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 17 - 289
Target Start/End: Original strand, 5138005 - 5138274
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtggcacgatttggaaaatcg 116  Q
    |||||||||||||||   ||||||||||||||||||||||||||||||||| | || | |||||||  | ||| |||||||| ||||||| |  ||||||    
T  5138005 aaatcgtgacacgatcaagaaacttgctcgttaagtatccttgataaggaccggtcgttccttgggacggacgcaaatcgtgacacgattggacaaatcg 5138104  T
Q  117 tgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-gaga-gttggaagaaagagagacttgggaaatcaaagggtg 214  Q
    |||||||||||   || |||||| ||||||  | |||||||||||||||  ||||||| |||| ||||||||  ||||| |||||||||||||||||| |    
T  5138105 tgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaagagagaggttggaag--agagaaacttgggaaatcaaaggg-g 5138200  T
Q  215 aaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    || ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |||||||| |||||    
T  5138201 aagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaataccttgtagagaga 5138274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 95; E-Value: 2e-46
Query Start/End: Original strand, 11 - 281
Target Start/End: Complemental strand, 13992755 - 13992485
Alignment:
Q  11 tttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttg 108  Q
    |||||||||||||||||||||| | ||||||||||||||||| | | |||||||||||| |||||||||| |  |||||||  ||||||| |||||| ||    
T  13992755 tttgggaaatcgtgacacgattttcaaacttgctcgttaagttttcatgataaggactggtcataccttgtgacgtacgtatcaatcgtgacacgatctg 13992656  T
Q  109 gaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatcttt-gaaggagagttggaagaaagagagacttgggaaatca 207  Q
    | ||||||||||||||||   |||  ||||| ||||||| | |||||||||||||||  ||| || |||||| | ||||| ||||| |||||||||||||    
T  13992655 g-aaatcgtgacacgattttatcagtggaagactagtat-ttaagtgttcttgtgcagatttggagggagagcttgaagagagagaaacttgggaaatca 13992558  T
Q  208 aagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  13992557 aaggtagcaactttagggtttaggg-tctttgattagagtctctcttgggttgggaaacattgtaaacaccttg 13992485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 91; E-Value: 4e-44
Query Start/End: Original strand, 1 - 295
Target Start/End: Complemental strand, 31495789 - 31495495
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||| ||||||| ||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |  ||||||  | ||| |  ||||||    
T  31495789 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtttcttgggacgaacgcaccaatcgt 31495690  T
Q  98 ggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagact 197  Q
    | ||| |  |||||| |||||||||||||   |||  ||| ||||| ||| | |||||||||||||||  |||||||||||||||||||| ||||| |||    
T  31495689 gacacaacctggaaa-tcgtgacacgattttatcagtggagggctaatat-ttaagtgttcttgtgcagatttgaaggagagttggaagagagagaaact 31495592  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||||||||||||| | ||||||||||||||  | |||||||||||||  ||||||||||||  ||||||||||||||||||| | ||||| |||||    
T  31495591 tgggaaatcaaagggagtaactctagggtttatag-tctttgattagagcttctcttgggttgggaaacatgggaaacaccttgaagagagaaaatca 31495495  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 187
Target Start/End: Complemental strand, 24742465 - 24742278
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||| ||   | ||| ||||||||     
T  24742465 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcatacctgggaacggacgcaaatcgtgc 24742366  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||| ||| |||||||||||||||| ||||| |||||| ||||||||||  |||||||||||||  |||| ||||||| ||||||||    
T  24742365 cacgatctgg-aaatcgtgacacgatttcttcagaggaagactagtatatattgtgttcttgtgcagatttgtaggagagcttggaaga 24742278  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 1 - 164
Target Start/End: Complemental strand, 51520938 - 51520775
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||| ||||||||||  |||||||||||||||||||||| ||||||||||||||| ||||||||||   ||| ||||||||     
T  51520938 cgtggcacgatcttgggaaatcatgacacgattcagaaacttgctcgttaagtatccctgataaggactgatc-taccttgggtcagacgcaaatcgtga 51520840  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||||||| |||||||| ||| ||||||||| |||||||||||||||||  ||||||||||||    
T  51520839 cacgatttgggaaatcgtggcacaattgcttcagaggaaggctagtatatattgtgttcttgtgc 51520775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 87; E-Value: 1e-41
Query Start/End: Original strand, 189 - 295
Target Start/End: Original strand, 7124787 - 7124891
Alignment:
Q  189 agagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagag 288  Q
    |||||||||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||    
T  7124787 agagagacttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtaaagag 7124884  T
Q  289 agaatca 295  Q
    |||||||    
T  7124885 agaatca 7124891  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 173
Target Start/End: Original strand, 56141624 - 56141797
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||| |||||||||||| || ||||||||||   | | ||||||||     
T  56141624 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccctgataaggactggtc-taccttgggtcagatgcaaatcgtga 56141722  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaa 173  Q
    |||||| |||| |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||| | ||||||    
T  56141723 cacgatcttgggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaa 56141797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 1 - 107
Target Start/End: Complemental strand, 29761146 - 29761039
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||||||||||||||||||| |||||||||||   | ||| |||||||||    
T  29761146 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatccttgataaggactggtcataccttggtacggacgcaaatcgtgg 29761047  T
Q  100 cacgattt 107  Q
    ||||||||    
T  29761046 cacgattt 29761039  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 56; E-Value: 3e-23
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 9228798 - 9228972
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  || ||||||||||     | | ||||||     
T  9228798 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcagatcgtga 9228896  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||| | |||||||    
T  9228897 cacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 9228972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 52; E-Value: 8e-21
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 18712367 - 18712541
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  ||| |||||||||     | | ||||||     
T  18712367 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtca-accttgggtccgttgaagatcgtga 18712465  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    ||| || | ||||||||||| ||||||| |||||  ||||| ||||||||||  |||||||||||| | |||||||    
T  18712466 cacaatctaggaaaatcgtggcacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 18712541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 7124601 - 7124670
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||||||| |||||||||||||||||||   |||||||||||||||||||||||||||||||||||    
T  7124601 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactg 7124670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 9224011 - 9224185
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  || ||||||||||     | | ||||||     
T  9224011 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcagatcgtga 9224109  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||| ||| ||||| |||||| ||||||||||  |||||||| ||| | |||||||    
T  9224110 cacgatctagggaaatcgtggcacaatttcttcagaggaagactagtatatattgtgttcttctgcttttttgaag 9224185  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 12 - 126
Target Start/End: Original strand, 28468102 - 28468217
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgt--aaatcgtggcacgatttgg 109  Q
    |||| |||||||||||||||| | ||||||||||||||||| ||  |||||||||||| || ||||||| |  ||||||  |||||||| ||||| ||||    
T  28468102 ttggaaaatcgtgacacgattttcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgtgacgtacgtacaaatcgtgacacgacttgg 28468201  T
Q  110 aaaatcgtgacacgatt 126  Q
     ||||||||||||||||    
T  28468202 -aaatcgtgacacgatt 28468217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 3814493 - 3814425
Alignment:
Q  1 cgtggcacgatttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||| |||||||||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  3814493 cgtgtcacgatttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactg 3814425  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 169 - 281
Target Start/End: Original strand, 5429537 - 5429647
Alignment:
Q  169 ttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacat 268  Q
    ||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  ||||||    
T  5429537 ttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaagtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacat 5429634  T
Q  269 gggaaacaccttg 281  Q
     | ||||||||||    
T  5429635 tgtaaacaccttg 5429647  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 30000116 - 30000005
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||    |||| |||||||||||| |||||||||||||| |||||||||||   |||||    
T  30000116 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggagacaactttagggtttaggg-tctttgattagagt-tctcttgggtttggaaaca 30000019  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  30000018 ttgtaaacaccttg 30000005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45347429 - 45347498
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  45347429 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactg 45347498  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 45356910 - 45356979
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  45356910 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactg 45356979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 52082968 - 52082857
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||||| || | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  52082968 tttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 52082871  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  52082870 ttgtaaacaccttg 52082857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 183 - 281
Target Start/End: Original strand, 48142914 - 48143010
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  48142914 gaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 48143010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 5733122 - 5733065
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  5733122 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactg 5733065  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 9927768 - 9927657
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||| | | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  |||||    
T  9927768 tttgaaggagggcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattaaagt-tctcttgggttgggaaaca 9927671  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  9927670 ttgtaaacaccttg 9927657  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 12 - 69
Target Start/End: Complemental strand, 18856185 - 18856128
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  18856185 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggactg 18856128  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 34570725 - 34570614
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| ||||| | ||||| |||||||||||||||||  | | || ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  34570725 tttgaaggagagctggaacagagagaaacttgggaaatcaaaggaggtagctttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 34570628  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||| ||||    
T  34570627 ttgaaaacatcttg 34570614  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 37740483 - 37740594
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||||||||   ||||| ||||| |||||||||||||||||  | || | ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  37740483 tttgaaggagagcatgaagagagagaaacttgggaaatcaaaggaggtaagtttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 37740580  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  37740581 ttgtaaacaccttg 37740594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 52095673 - 52095562
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||||| || | ||||| ||||| |||||||||||||||||  | |||| ||||||| ||||  ||||||||||||| ||||||||||||  |||||    
T  52095673 tttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-actttgattagagt-tctcttgggttgggaaaca 52095576  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  52095575 ttgtaaacaccttg 52095562  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 56178947 - 56178836
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||| ||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| | || |||||||||||||| ||||||||||||  |||||    
T  56178947 tttgaaagagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaagg-tctttgattagagt-tctcttgggttgggaaaca 56178850  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  56178849 ttgtaaacaccttg 56178836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 168 - 260
Target Start/End: Complemental strand, 52093975 - 52093885
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttg 260  Q
    ||||||||| || | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||    
T  52093975 tttgaaggacagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttg 52093885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 12739846 - 12739751
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacacctt 280  Q
    ||||| ||||| ||||| |||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | |||||||||    
T  12739846 gaagagagagaaacttgagaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacacctt 12739751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 183 - 280
Target Start/End: Complemental strand, 12748052 - 12747957
Alignment:
Q  183 gaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacacctt 280  Q
    ||||| ||||| ||||| |||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | |||||||||    
T  12748052 gaagagagagaaacttgagaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacacctt 12747957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 26175947 - 26175836
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||| ||| |||| |||||||||| ||| ||| ||||||||  |||||    
T  26175947 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagagttgaggg-tctttgattaaagt-tctgttgggttgggaaaca 26175850  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  26175849 ttgtaaacaccttg 26175836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 277
Target Start/End: Complemental strand, 54200217 - 54200110
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| |||| || |||| ||||| |||| ||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  54200217 tttgaagaagagctgaaagagagagaaacttaggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 54200120  T
Q  268 tgggaaacac 277  Q
    | | ||||||    
T  54200119 ttgtaaacac 54200110  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 17 - 126
Target Start/End: Original strand, 31985236 - 31985346
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacg--taaatcgtggcacgatttggaaaat 114  Q
    |||||||||||||||| | ||||||||| ||||||| | |  ||||||||||| || ||||||| |  |||||  | ||||||| |||||||||| ||||    
T  31985236 aaatcgtgacacgattttcaaacttgctggttaagttttcaggataaggactggtcgtaccttgtgacgtacgcatcaatcgtgacacgatttgg-aaat 31985334  T
Q  115 cgtgacacgatt 126  Q
    |||| |||||||    
T  31985335 cgtggcacgatt 31985346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 111 - 174
Target Start/End: Complemental strand, 3814383 - 3814320
Alignment:
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||||||||||||| |||||  ||||| ||||||||||  |||||||||||| | |||||||    
T  3814383 aaatcgtgacacgatttcttcaggggaagactagtatatattgtgttcttgtgcttttttgaag 3814320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 5871704 - 5871788
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||| ||| || |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  5871704 acttgggaaatcaaaggaggtaactttaggg-ttatgggtctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 5871788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 13009715 - 13009631
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||||||||||||| |  | |||| ||||||| ||||| ||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  13009715 acttgggaaatcaaatgaggtaactttagggttaagggt-ctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 13009631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 111 - 165
Target Start/End: Complemental strand, 29761055 - 29761001
Alignment:
Q  111 aaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
    |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||||    
T  29761055 aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 29761001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0565 (Bit Score: 142; Significance: 2e-74; HSPs: 1)
Name: scaffold0565
Description:

Target: scaffold0565; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 3073 - 2787
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||||||| |||||||||||||||||||   |||||||||||||||||||| |||||||||||||| || | |||||||  | ||| ||||||||     
T  3073 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtattcttgataaggactggtcgttccttgggacggacgcaaatcgtga 2974  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag--gagagttggaagaaagagagact 197  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  |||||||  ||||||||||||  |||||||||    
T  2973 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaaggagagagttggaag--agagagact 2877  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  2876 tgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 2787  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 142; Significance: 2e-74; HSPs: 32)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 142; E-Value: 2e-74
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 12647855 - 12647569
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||||||| |||||||||||||||||||    |||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  12647855 cgtggcacgattgtgggaaatcgtgacacgatccataaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 12647756  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag--gagagttggaagaaagagagact 197  Q
    ||||||| ||||||||||||||||||||   || |||||| ||||||  | |||||||||||||||  |||||||  ||||||||||||  |||||||||    
T  12647755 cacgattgggaaaatcgtgacacgattggaacagaggaagactagta-cttaagtgttcttgtgcagatttgaaggagagagttggaag--agagagact 12647659  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    ||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  12647658 tgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 12647569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 119; E-Value: 8e-61
Query Start/End: Original strand, 1 - 295
Target Start/End: Original strand, 6266387 - 6266681
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||| ||||||| ||||||||||||||||||||   |||||| |||||||||| ||| ||||||||| || || |  ||||||  | ||| |  ||||||    
T  6266387 cgtgacacgattgtgggaaatcgtgacacgatttgcaaacttactcgttaagtttccatgataaggaatggtcgtttcttgggacgaacgcaccaatcgt 6266486  T
Q  98 ggcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagact 197  Q
    | |||||  |||||| |||||||||||||   |||  ||| ||||||||| ||| |||||||||||||  ||||||||||||| |||||| |||||||||    
T  6266487 gacacgacctggaaa-tcgtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagatttgaaggagagtgggaagagagagagact 6266584  T
Q  198 tgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagagagaatca 295  Q
    ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||| |||||    
T  6266585 tgggaaatcaaagggagcaactctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagagaaaatca 6266681  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 107; E-Value: 1e-53
Query Start/End: Original strand, 18 - 281
Target Start/End: Complemental strand, 4484792 - 4484530
Alignment:
Q  18 aatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaatc 115  Q
    |||||||||||||||   ||||||||||||||||| ||  |||||||||||| || |||||||||  |||||||  ||||||| |||||| |||||| ||    
T  4484792 aatcgtgacacgatttgcaaacttgctcgttaagtttctatgataaggactggtcgtaccttgggacgtacgtaccaatcgtgacacgatctggaaa-tc 4484694  T
Q  116 gtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagggtga 215  Q
    |||||||||||   |||  ||||||||||||| ||| |||||||||||||  |||||| ||||||||||||| ||||| |||||||||||||||||| |     
T  4484693 gtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagatttgaaagagagttggaagagagagaaacttgggaaatcaaagggagt 4484595  T
Q  216 aactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    ||||||||||||||||| |||||||||||||  ||||||||||||  |||||| | ||||||||||    
T  4484594 aactctagggtttaggg-tctttgattagagcttctcttgggttgggaaacattgtaaacaccttg 4484530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 105; E-Value: 2e-52
Query Start/End: Original strand, 1 - 187
Target Start/End: Original strand, 9295974 - 9296161
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||| ||||||||||||||||||||||| ||||||||||||| | ||| ||||||||     
T  9295974 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcattaagtatccttgataaggactggtcataccttgggtcggacgcaaatcgtga 9296073  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagag-ttggaaga 187  Q
    |||||| | |||||||||||||||||||||||| |||||| ||||||| |||||||||||||||| | |||| ||||||| ||||||||    
T  9296074 cacgatct-gaaaatcgtgacacgattgcttcagaggaagactagtatttaaagtgttcttgtgcttttttggaggagagcttggaaga 9296161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 1 - 165
Target Start/End: Complemental strand, 14292013 - 14291849
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  ||||||||||||||||||| |  |||||||||||| ||||||||||||||||||| ||||||||     
T  14292013 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtaccactgataaggactggtcataccttgggttgtacgcaaatcgtga 14291914  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
    |||||| ||| |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||||    
T  14291913 cacgatctgg-aaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgca 14291849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 89; E-Value: 6e-43
Query Start/End: Original strand, 12 - 277
Target Start/End: Original strand, 30833046 - 30833310
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttgg 109  Q
    ||||||||||||||||||||| | ||||||||||||||||| |||  ||||||||| | || ||||||| |  |||||||  ||||||| ||||| ||||    
T  30833046 ttgggaaatcgtgacacgattttcaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttgg 30833145  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaa 209  Q
    ||| |||||||||||||   |||  ||||| ||||||| ||| |||||||||||||  |||||||| ||| ||||||| | ||| |||||||||||||||    
T  30833146 aaa-tcgtgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagatttgaaggtgagctggaagagaaagaaacttgggaaatcaaa 30833243  T
Q  210 gggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacac 277  Q
    ||| | ||||||||||||||||||| |||||||||||  | ||||||||||  |||||| | ||||||    
T  30833244 gggagtaactctagggtttagggtt-tttgattagagcttatcttgggttgggaaacattgtaaacac 30833310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 86; E-Value: 4e-41
Query Start/End: Original strand, 1 - 165
Target Start/End: Original strand, 11098499 - 11098663
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||| ||| ||||||||||||||| ||||||||     
T  11098499 cgtggcacgatcttgggaaatcgtgacacgatttagaaacttgctcgttaagtatcactgataaggactggtcaaaccttgggttgtacgcaaatcgtga 11098598  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
    |||||| ||| |||||||| ||||||| ||||| |||||| |||| |||||  |||||||||||||    
T  11098599 cacgatctgg-aaatcgtggcacgatttcttcagaggaagactagcatatattgtgttcttgtgca 11098663  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 76; E-Value: 4e-35
Query Start/End: Original strand, 18 - 281
Target Start/End: Original strand, 32289279 - 32289541
Alignment:
Q  18 aatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaatc 115  Q
    |||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |||||||||  |||||    ||||||| |||||  |||||| ||    
T  32289279 aatcgtgacacgatttgaaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgctccaatcgtgacacgacctggaaa-tc 32289377  T
Q  116 gtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatcttt-gaaggagagttggaagaaagagagacttgggaaatcaaagggtg 214  Q
    |||||||||||   |||  ||| ||||||||| ||| |||||||||||||  ||| ||||| ||| ||||||| ||||| |||||||||||||||||| |    
T  32289378 gtgacacgattttatcagtggagggctagtatttaa-gtgttcttgtgcagattttgaagg-gagatggaagagagagaaacttgggaaatcaaagggag 32289475  T
Q  215 aaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
     ||||||||||||||| | |||||||||||||  |||||||||||   |||||||| ||||||||||    
T  32289476 taactctagggtttagag-tctttgattagagcttctcttgggtttggaaacatggtaaacaccttg 32289541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 54; E-Value: 5e-22
Query Start/End: Original strand, 12 - 122
Target Start/End: Complemental strand, 25410141 - 25410030
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttgg 109  Q
    ||||||||||||||||||||| | ||||||||||||||||||||||||||||||| || || ||||||| |  |||||||  ||||||| ||||| ||||    
T  25410141 ttgggaaatcgtgacacgattttcaaacttgctcgttaagtatccttgataaggaatggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttgg 25410042  T
Q  110 aaaatcgtgacac 122  Q
     ||||||||||||    
T  25410041 -aaatcgtgacac 25410030  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 4503443 - 4503332
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||||| ||||||||||||||||| ||||||||||||  |||||    
T  4503443 tttgaaggagagctagaagagagagaaacttgggaaatcaaaggaagcaactttagggttta-ggttctttgattagagt-tctcttgggttgggaaaca 4503346  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  4503345 ttgtaaacaccttg 4503332  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 36205974 - 36205863
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  36205974 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 36205877  T
Q  268 tgggaaacaccttg 281  Q
    ||| ||||||||||    
T  36205876 tggtaaacaccttg 36205863  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 12 - 165
Target Start/End: Complemental strand, 3492252 - 3492099
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttgg 109  Q
    ||||||||||||||||||||| ||||||||||||||||||| |||  ||||||||| | || ||||||| |  |||||||  ||||||| ||||| ||||    
T  3492252 ttgggaaatcgtgacacgattctgaaacttgctcgttaagtttccaggataaggacaggtcgtaccttgtgacgtacgtaccaatcgtgacacgacttgg 3492153  T
Q  110 aaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgca 165  Q
     |||||||||||| |||   |||  ||||| ||||||| | |||||||||||||||    
T  3492152 -aaatcgtgacacaattttatcagtggaagactagtat-ttaagtgttcttgtgca 3492099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 36988386 - 36988275
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  36988386 tttgaaggagagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 36988289  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  36988288 tagtaaacaccttg 36988275  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 39284742 - 39284853
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||    
T  39284742 tttgaaggagaggttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaaca 39284839  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  39284840 ttgtaaacaccttg 39284853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 45099612 - 45099723
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||    
T  45099612 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaaca 45099709  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  45099710 ttgtaaacaccttg 45099723  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 44; E-Value: 5e-16
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 39811589 - 39811763
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  |||||||||||  || | |||||||      | | ||||||     
T  39811589 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatcactgataaggacttgtc-tgccttggggccgttgcagatcgtga 39811687  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||||||| ||||| |||||| ||||||||||  |||||||||||| | |||||||    
T  39811688 cacgatctagggaaatcgtggcacgatttcttcagaggaagactagtatatattgtgttcttgtgcttttttgaag 39811763  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 5723565 - 5723454
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    ||||||| |||| | ||||| ||||| |||||||||||||||||  | |||| |||||||| ||| |||||||||||||| ||||||||||||  |||||    
T  5723565 tttgaagaagagcttgaagagagagaaacttgggaaatcaaaggaggcaactttagggttt-ggggtctttgattagagt-tctcttgggttgggaaaca 5723468  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  5723467 ttgtaaacaccttg 5723454  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 40; E-Value: 0.0000000000001
Query Start/End: Original strand, 3 - 69
Target Start/End: Complemental strand, 19344895 - 19344828
Alignment:
Q  3 tggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  19344895 tggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 19344828  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 39; E-Value: 0.0000000000004
Query Start/End: Original strand, 168 - 282
Target Start/End: Original strand, 38312097 - 38312209
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| | |||||||||||||||  | |||| ||||||| | ||||||||||||||||| ||||||||||||  |||||    
T  38312097 tttgaaggagagcttgaagagagagaaatttgggaaatcaaaggaggtaactttagggttga-ggttctttgattagagt-tctcttgggttgggaaaca 38312194  T
Q  268 tgggaaacaccttgt 282  Q
    | | | |||||||||    
T  38312195 ttgtatacaccttgt 38312209  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 2334728 - 2334617
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| ||||||| |||| | |||||||||||| ||||||||||||  |||||    
T  2334728 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaggtaactttagggttgaggg-tatttgattagagt-tctcttgggttgggaaaca 2334631  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  2334630 ttgtaaacaccttg 2334617  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 19349755 - 19349686
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||| | ||||||||||  ||||||||||||    
T  19349755 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgttggttaagtatctctgataaggactg 19349686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 11151875 - 11151791
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  11151875 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 11151791  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 28258774 - 28258889
Alignment:
Q  11 tttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacg--taaatcgtggcacgatttg 108  Q
    |||| ||||||||||||||||| | ||||||||| ||||||| | |  |||||||  || || |||||||||| |||||  | |||||||||||||||||    
T  28258774 tttgtgaaatcgtgacacgattttcaaacttgctggttaagttttcaggataagg-ttggtcgtaccttgggtcgtacgcatcaatcgtggcacgatttg 28258872  T
Q  109 gaaaatcgtgacacgatt 126  Q
    ||||| |||| |||||||    
T  28258873 gaaaa-cgtggcacgatt 28258889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 42362236 - 42362320
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  42362236 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 42362320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 168 - 211
Target Start/End: Complemental strand, 2837155 - 2837112
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    |||||||||||||| ||||| ||||| |||||||||||||||||    
T  2837155 tttgaaggagagtttgaagagagagaaacttgggaaatcaaagg 2837112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 32; E-Value: 0.000000007
Query Start/End: Original strand, 22 - 126
Target Start/End: Complemental strand, 40739322 - 40739217
Alignment:
Q  22 gtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaatcgtga 119  Q
    ||||||| ||| | ||||||||||||||||| | |  ||||||||| | || ||||||| |  |||||||  ||||||| |||||||||| |||||||||    
T  40739322 gtgacacaattttcaaacttgctcgttaagttttcaggataaggacaggtcgtaccttgtgacgtacgtatcaatcgtgacacgatttgg-aaatcgtga 40739224  T
Q  120 cacgatt 126  Q
    |||||||    
T  40739223 cacgatt 40739217  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Complemental strand, 724028 - 723944
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||||||| ||| ||||||||  |||||| | ||||||||||    
T  724028 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tcttttgggttgggaaacattgtaaacaccttg 723944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 195 - 281
Target Start/End: Original strand, 11690385 - 11690469
Alignment:
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||||||  | |||| ||||||| |||| |||||||||| ||| ||||||||||||  |||||| | ||||||||||    
T  11690385 acttgggaaatcaaaggaggtaactttagggttgaggg-tctttgattatagt-tctcttgggttgggaaacattgtaaacaccttg 11690469  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 257
Target Start/End: Complemental strand, 6595317 - 6595230
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttggg 257  Q
    |||||||||||| | ||||| ||||| |||| |||||||||| |  | |||| ||||||| |||| |||||||||||||| |||||||||    
T  6595317 tttgaaggagagcttgaagagagagaaacttaggaaatcaaatgaggtaactttagggttgaggg-tctttgattagagt-tctcttggg 6595230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 17057680 - 17057569
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||||| ||||| ||||| | || ||||||||| ||  | |||| ||||||| | || |||||||||||||| ||||||||||||  ||| |    
T  17057680 tttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggtaactttagggttgaagg-tctttgattagagt-tctcttgggttgggaaata 17057583  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  17057582 ttgtaaacaccttg 17057569  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 17085663 - 17085552
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||||| ||||| ||||| | || ||||||||| ||  | |||| ||||||| | || |||||||||||||| ||||||||||||  ||| |    
T  17085663 tttgaaggagagtttgaagagagagaaaatttggaaatcaacggaggtaactttagggttgaagg-tctttgattagagt-tctcttgggttgggaaata 17085566  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  17085565 ttgtaaacaccttg 17085552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 17 - 69
Target Start/End: Complemental strand, 32247244 - 32247192
Alignment:
Q  17 aaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    |||||||| |||||||  |||||||||||||||||||||  |||||| |||||    
T  32247244 aaatcgtggcacgattcagaaacttgctcgttaagtatcactgataaagactg 32247192  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0674 (Bit Score: 132; Significance: 1e-68; HSPs: 1)
Name: scaffold0674
Description:

Target: scaffold0674; HSP #1
Raw Score: 132; E-Value: 1e-68
Query Start/End: Original strand, 1 - 289
Target Start/End: Complemental strand, 4198 - 3909
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    |||||||||||| |||||||||||||||||||   ||||||||||||||||||||||||||||||||||| || | |||||||  | ||| ||||||||     
T  4198 cgtggcacgattgtgggaaatcgtgacacgatccagaaacttgctcgttaagtatccttgataaggactggtcgttccttgggacggacgcaaatcgtga 4099  T
Q  100 cacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag-----gagagttggaagaaagagag 194  Q
    ||| ||| ||||||||||||||||||||   || |||||| ||||||  ||| |||||| ||||||  |||||||     |||||||||||||  |||||    
T  4098 cacaattgggaaaatcgtgacacgattggaacagaggaagactagtacttaa-gtgttcctgtgcagatttgaagtgagagagagttggaaga--gagag 4002  T
Q  195 acttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttgtaaagaga 289  Q
    |||||||||||||||||| ||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||    
T  4001 acttgggaaatcaaaggg-gaagctctagggtttagggttctttgattagagtatctcttgggttg-aaaacatgggaaacaccttgtagagaga 3909  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491 (Bit Score: 108; Significance: 3e-54; HSPs: 3)
Name: scaffold0491
Description:

Target: scaffold0491; HSP #1
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 1 - 281
Target Start/End: Complemental strand, 11640 - 11361
Alignment:
Q  1 cgtggcacgatttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtg 98  Q
    |||| |||||||||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |||||||||  ||||| |  |||||||    
T  11640 cgtgacacgatttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttgggacgtacgcaccaatcgtg 11541  T
Q  99 gcacgatttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagactt 198  Q
     |||||| ||| ||||||||||||||||   |||  ||||||||||||| | |||||||||||||||  |||  | ||||||||||||| ||||| ||||    
T  11540 acacgatctgg-aaatcgtgacacgattttatcagtggaaggctagtat-ttaagtgttcttgtgcagattttgaagagagttggaagagagagaaactt 11443  T
Q  199 gggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||||||||| | |||||||||||||| || |||||||||||||  ||||||||||||  |||||| | ||||||||||    
T  11442 gggaaatcaaagggagtaactctagggtttatgg-tctttgattagagcttctcttgggttgggaaacattgtaaacaccttg 11361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0491; HSP #2
Raw Score: 62; E-Value: 8e-27
Query Start/End: Original strand, 112 - 281
Target Start/End: Complemental strand, 9102 - 8935
Alignment:
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    |||||||||||||||   |||  ||||||||||||| ||| |||||||||||||  |||  | ||||||||||||| ||||| |||||||||||||||||    
T  9102 aatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagattttgaagagagttggaagagagagaaacttgggaaatcaaagg 9004  T
Q  212 gtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    | | ||||||||| ||||||| |||||||||||||  ||||||||||||  |||||| | ||| ||||||    
T  9003 gagtaactctaggctttaggg-tctttgattagagcttctcttgggttgggaaacattgtaaagaccttg 8935  T

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Target: scaffold0491; HSP #3
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 9 - 82
Target Start/End: Complemental strand, 9187 - 9114
Alignment:
Q  9 gatttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttggg 82  Q
    ||||||||||||||||||||||||   ||||||||||||||||| ||| |||||||||||| || |||||||||    
T  9187 gatttgggaaatcgtgacacgatttgcaaacttgctcgttaagtttccatgataaggactggtcgtaccttggg 9114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286 (Bit Score: 63; Significance: 2e-27; HSPs: 2)
Name: scaffold0286
Description:

Target: scaffold0286; HSP #1
Raw Score: 63; E-Value: 2e-27
Query Start/End: Original strand, 112 - 254
Target Start/End: Original strand, 22146 - 22286
Alignment:
Q  112 aatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaaggagagttggaagaaagagagacttgggaaatcaaagg 211  Q
    |||||||||||||||   |||  ||||||||||||| ||| |||||||||||||  |||||||| ||| | ||||| ||||| |||||||||||||||||    
T  22146 aatcgtgacacgattttatcagtggaaggctagtatttaa-gtgttcttgtgcagatttgaaggtgagctagaagagagagaaacttgggaaatcaaagg 22244  T
Q  212 gtgaaactctagggtttagggttctttgattagagtatctctt 254  Q
    | | ||||||||||||||||| |||||||||||||| ||||||    
T  22245 gagcaactctagggtttaggg-tctttgattagagtttctctt 22286  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0286; HSP #2
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 22064 - 22132
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttg 80  Q
    ||||||||||||||||||||||| ||||||||||||||||||||  |||||||||| | || |||||||    
T  22064 ttgggaaatcgtgacacgattgtaaaacttgctcgttaagtatcactgataaggacaggtcgtaccttg 22132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1519 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold1519
Description:

Target: scaffold1519; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 18 - 281
Target Start/End: Original strand, 613 - 885
Alignment:
Q  18 aatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttggaaaatc 115  Q
    ||||||||||||||| | ||| ||||||||||||| |||  |||| |||||| || ||||||| |  |||||||  ||| ||| ||||||||||||| ||    
T  613 aatcgtgacacgattttcaaatttgctcgttaagtttccaggatagggactggtcgtaccttgtgacgtacgtaccaattgtgacacgatttggaaa-tc 711  T
Q  116 gtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatcttt-gaaggagag-ttgga---------agaaagagagacttgggaaa 204  Q
    |||||||||||   |||  ||||| ||||||| ||| |||||||||||||  ||| | ||||||| |||||         ||| ||||| ||||||||||    
T  712 gtgacacgattttatcagtggaagactagtatttaa-gtgttcttgtgcagattttggaggagagcttggatgagctagaagagagagaaacttgggaaa 810  T
Q  205 tcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaacatgggaaacaccttg 281  Q
    |||||||  | |||| |||||||||||| |||||||||||||| ||||||||||||  |||||| | ||||||||||    
T  811 tcaaaggcagcaactttagggtttaggg-tctttgattagagt-tctcttgggttgggaaacattgtaaacaccttg 885  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0002 (Bit Score: 50; Significance: 1e-19; HSPs: 1)
Name: scaffold0002
Description:

Target: scaffold0002; HSP #1
Raw Score: 50; E-Value: 1e-19
Query Start/End: Original strand, 168 - 281
Target Start/End: Original strand, 434390 - 434501
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||| ||| | ||||| ||||| |||||||||||||||||  | |||| |||||||||||| |||||||||||||| |||||||||||| ||||||    
T  434390 tttgaaggtgagcttgaagagagagaaacttgggaaatcaaaggaagcaactttagggtttaggg-tctttgattagagt-tctcttgggttggaaaaca 434487  T
Q  268 tgggaaacaccttg 281  Q
    ||| ||| ||||||    
T  434488 tggtaaataccttg 434501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0259 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0259
Description:

Target: scaffold0259; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 1851 - 2026
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||| ||  |||||||||||| ||| ||||||||      | | ||||||     
T  1851 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-accttgggaccgttgcagatcgtga 1949  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagg 175  Q
    |||||| | || |||||||||||||||| |||||  | | | |||||||||||||||||||||||| | ||||||||    
T  1950 cacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatttgaagg 2026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 49; Significance: 5e-19; HSPs: 1)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 49; E-Value: 5e-19
Query Start/End: Original strand, 1 - 175
Target Start/End: Original strand, 148556 - 148731
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||| ||  |||||||||||| ||| ||||||||      | | ||||||     
T  148556 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtttctctgataaggactggtca-accttgggaccgttgcagatcgtga 148654  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaagg 175  Q
    |||||| | || |||||||||||||||| |||||  | | | |||||||||||||||||||||||| | ||||||||    
T  148655 cacgatctagggaaatcgtgacacgatttcttcagggcaggactagtatataaagtgttcttgtgcttatttgaagg 148731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0135 (Bit Score: 48; Significance: 2e-18; HSPs: 1)
Name: scaffold0135
Description:

Target: scaffold0135; HSP #1
Raw Score: 48; E-Value: 2e-18
Query Start/End: Original strand, 1 - 174
Target Start/End: Original strand, 34666 - 34840
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  || ||||||||||     | | ||||||     
T  34666 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggacttgtc-taccttgggtccgttgcagatcgtga 34764  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgcatctttgaag 174  Q
    |||||| | || |||||||| ||| ||| ||||| |||||| ||||||||||  |||||||| ||| | |||||||    
T  34765 cacgatctagggaaatcgtggcactatttcttcagaggaagactagtatatattgtgttcttttgcttttttgaag 34840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0355 (Bit Score: 46; Significance: 3e-17; HSPs: 1)
Name: scaffold0355
Description:

Target: scaffold0355; HSP #1
Raw Score: 46; E-Value: 3e-17
Query Start/End: Original strand, 1 - 164
Target Start/End: Original strand, 3449 - 3613
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgtaaatcgtgg 99  Q
    ||||||||||| |||||||||||||||||||||  |||||||||||||||||||||  |||||||||||  ||| |||| |||      | | ||||||     
T  3449 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctcgttaagtatcaatgataaggactagtca-acctggggaccgttgcagatcgtga 3547  T
Q  100 cacgat-ttggaaaatcgtgacacgattgcttcaaaggaaggctagtatataaagtgttcttgtgc 164  Q
    |||||| | ||||||||||||||||||| |||||  ||||| ||||||||||  || |||||||||    
T  3548 cacgatctaggaaaatcgtgacacgatttcttcaggggaagactagtatatattgtattcttgtgc 3613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0188 (Bit Score: 45; Significance: 1e-16; HSPs: 1)
Name: scaffold0188
Description:

Target: scaffold0188; HSP #1
Raw Score: 45; E-Value: 1e-16
Query Start/End: Original strand, 12 - 80
Target Start/End: Original strand, 17556 - 17624
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttg 80  Q
    |||||||||||||||| |||| | ||||||||||||||||||||||||||||||| || || |||||||    
T  17556 ttgggaaatcgtgacatgattttcaaacttgctcgttaagtatccttgataaggattggtcgtaccttg 17624  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0464 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0464
Description:

Target: scaffold0464; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Complemental strand, 833 - 764
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  833 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 764  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 2)
Name: scaffold0197
Description:

Target: scaffold0197; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 13896 - 13965
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  13896 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 13965  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0197; HSP #2
Raw Score: 35; E-Value: 0.0000000001
Query Start/End: Original strand, 12 - 74
Target Start/End: Original strand, 18788 - 18850
Alignment:
Q  12 ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcat 74  Q
    |||||||||||||||||||||  |||||||||| ||||||||||  |||||| ||||| ||||    
T  18788 ttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaagactggtcat 18850  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0009 (Bit Score: 42; Significance: 0.000000000000007; HSPs: 1)
Name: scaffold0009
Description:

Target: scaffold0009; HSP #1
Raw Score: 42; E-Value: 0.000000000000007
Query Start/End: Original strand, 1 - 69
Target Start/End: Original strand, 176562 - 176631
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactg 69  Q
    ||||||||||| |||||||||||||||||||||  |||||||||| ||||||||||  ||||||||||||    
T  176562 cgtggcacgatcttgggaaatcgtgacacgattcagaaacttgctggttaagtatctctgataaggactg 176631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665 (Bit Score: 41; Significance: 0.00000000000003; HSPs: 2)
Name: scaffold0665
Description:

Target: scaffold0665; HSP #1
Raw Score: 41; E-Value: 0.00000000000003
Query Start/End: Original strand, 1 - 68
Target Start/End: Complemental strand, 8180 - 8112
Alignment:
Q  1 cgtggcacgat-ttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggact 68  Q
    ||||||||||| |||| ||||||||||||||||  |||||||||||||||||||||  |||||||||||    
T  8180 cgtggcacgatcttggaaaatcgtgacacgattcagaaacttgctcgttaagtatcactgataaggact 8112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0665; HSP #2
Raw Score: 29; E-Value: 0.0000004
Query Start/End: Original strand, 91 - 126
Target Start/End: Complemental strand, 8184 - 8148
Alignment:
Q  91 aaatcgtggcacgat-ttggaaaatcgtgacacgatt 126  Q
    ||||||||||||||| |||||||||||||||||||||    
T  8184 aaatcgtggcacgatcttggaaaatcgtgacacgatt 8148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0066 (Bit Score: 34; Significance: 0.0000000004; HSPs: 1)
Name: scaffold0066
Description:

Target: scaffold0066; HSP #1
Raw Score: 34; E-Value: 0.0000000004
Query Start/End: Original strand, 168 - 281
Target Start/End: Complemental strand, 20726 - 20615
Alignment:
Q  168 tttgaaggagagttggaagaaagagagacttgggaaatcaaagggtgaaactctagggtttagggttctttgattagagtatctcttgggttgaaaaaca 267  Q
    |||||||||||| | ||||| ||||| |||| ||||||||||||  | |||| ||||||| |||| |||||||||||||| | ||||||||||  | |||    
T  20726 tttgaaggagagctagaagagagagaaactttggaaatcaaaggaggtaactttagggttgaggg-tctttgattagagt-tatcttgggttgggagaca 20629  T
Q  268 tgggaaacaccttg 281  Q
    | | ||||||||||    
T  20628 ttgtaaacaccttg 20615  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0087 (Bit Score: 31; Significance: 0.00000003; HSPs: 1)
Name: scaffold0087
Description:

Target: scaffold0087; HSP #1
Raw Score: 31; E-Value: 0.00000003
Query Start/End: Original strand, 11 - 126
Target Start/End: Original strand, 43558 - 43673
Alignment:
Q  11 tttgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgtggcacgatttg 108  Q
    |||| |||||||||||| |||| | ||||||||| ||||||| | |  |||||||  || || |||||||||| ||| |||  |||||||||||||||||    
T  43558 tttgtgaaatcgtgacatgattttcaaacttgctggttaagttttcaggataagg-ttggtcgtaccttgggtcgtatgtatcaatcgtggcacgatttg 43656  T
Q  109 gaaaatcgtgacacgatt 126  Q
    ||||| |||| |||||||    
T  43657 gaaaa-cgtggcacgatt 43673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0098 (Bit Score: 30; Significance: 0.0000001; HSPs: 1)
Name: scaffold0098
Description:

Target: scaffold0098; HSP #1
Raw Score: 30; E-Value: 0.0000001
Query Start/End: Original strand, 1 - 126
Target Start/End: Complemental strand, 45710 - 45584
Alignment:
Q  1 cgtggcacgatt-tgggaaatcgtgacacgattgtgaaacttgctcgttaagtatccttgataaggactgatcataccttgggttgtacgta--aatcgt 97  Q
    |||||||||||| || ||||||||||||||||| | ||||||||| | ||||| | |  |||||||  || || |||||||||| |||| ||  ||||||    
T  45710 cgtggcacgattctgtgaaatcgtgacacgattttcaaacttgctggctaagttttcaggataagg-ttggtcgtaccttgggtcgtacatatcaatcgt 45612  T
Q  98 ggcacgatttggaaaatcgtgacacgatt 126  Q
    | |||||||||||||| |||| |||||||    
T  45611 gacacgatttggaaaa-cgtggcacgatt 45584  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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