View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4081_high_9 (Length: 423)
Name: NF4081_high_9
Description: NF4081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4081_high_9 |
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Alignment Details
Target: chr4 (Bit Score: 236; Significance: 1e-130; HSPs: 1)
Name: chr4
Description:
Target: chr4; HSP #1
Raw Score: 236; E-Value: 1e-130
Query Start/End: Original strand, 15 - 277
Target Start/End: Original strand, 33258269 - 33258534
Alignment:
| Q |
15 |
aattatttctaaattaaatggtggaaaagtgggttccaattttcctaggaatattagagtcgtgctaataacccatttgacagtgtaaaactcacgtgtc |
114 |
Q |
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| T |
33258269 |
aattatttctaaattaaatggtggaaaagtgggttccaattttcctaggaatattagtgtcgtgctaataacccatttgacagtgtaaaactcacgtgtc |
33258368 |
T |
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| Q |
115 |
tactccaagcaagtgcatga---tgatcttcaagtcatgggttgatatttgggtcatgatgatattcatgctaataattatagttacgatggtccatcgt |
211 |
Q |
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|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
33258369 |
tactccaagcaagtgcatgatgatgatcttcaagtcatgggttgatatttgggtcatgatgatattcatgctaataattatagttacgatggtccatcaa |
33258468 |
T |
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| Q |
212 |
atggttttaatttttattttgagtgaataaaatcaaatattctatgtaattctaataggcatggag |
277 |
Q |
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|||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
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| T |
33258469 |
atggttttaatttttattttgagtgactaaaatcaaatattctatgtaattctaataggcatggag |
33258534 |
T |
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