View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
|
Alignment Overview
Query: NF4081_low_26 (Length: 323)
Name: NF4081_low_26
Description: NF4081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4081_low_26 |
 | |
|
| [»] scaffold0477 (1 HSPs) |
| | |
|
| [»] scaffold0288 (1 HSPs) |
| | |
|
| [»] scaffold0475 (2 HSPs) |
| | |
|
Alignment Details
Target: chr6 (Bit Score: 253; Significance: 1e-141; HSPs: 31)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 253; E-Value: 1e-141
Query Start/End: Original strand, 17 - 313
Target Start/End: Original strand, 4563986 - 4564282
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||| |
|
|
| T |
4563986 |
cagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtggttcaatactttctcctgtggacaccaacttgc |
4564085 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
4564086 |
aattaagcctctatctgaaatttcattcacaaactcagatgacaaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaagggttta |
4564185 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctctgctcct |
313 |
Q |
| |
|
||| |||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||| |||||||||||||||||||||| | |||||| |
|
|
| T |
4564186 |
ttgcaattggccaacccccaagcaaattccaacagttgttttggtgtcataactgtaatgcttccaaaattcacataaacaacggatcccggctcct |
4564282 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #2
Raw Score: 177; E-Value: 2e-95
Query Start/End: Original strand, 17 - 313
Target Start/End: Original strand, 4602064 - 4602360
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||| || |||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4602064 |
cagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccgatcgaagggtggttcaacactttctcttgtggacaccaacttgc |
4602163 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||||||||||||||||||||||||| |
|
|
| T |
4602164 |
tattaggcctctatctgaaatttcatttgtaaactcagatgacaaaatcactgagccaccaatgacaagatcaggcctaatgatccacaaaaatggttta |
4602263 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctctgctcct |
313 |
Q |
| |
|
| | |||||||||| |||||||| ||||| || | ||| | ||||||| |||||||||||| || |||||||||||||||||||||| | |||||| |
|
|
| T |
4602264 |
tggcaattggccaaaccccaagcgaattctaataattgatggggtgtcataactgtaatgctgccaaaattcacataaacaacggatcccggctcct |
4602360 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #3
Raw Score: 169; E-Value: 1e-90
Query Start/End: Original strand, 17 - 313
Target Start/End: Original strand, 4617297 - 4617593
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| |||||||||||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
4617297 |
cagcgcatatactttcagtggttgaattccatccgcaatgagtcaagaatcctccgattgaagggtggttcaacactttgtcttgtggacaccaacttgc |
4617396 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||| ||||||||| |||||||||||| |||| |||||||||||||||||||| |||||||| |||||||||||||||| ||| |
|
|
| T |
4617397 |
tattaggcctctatctgcaatttcatttgtaaactcagatgagaaaatcactgagccaccaatgacaagatcaggccttatgatccacaaaaatgatttc |
4617496 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctctgctcct |
313 |
Q |
| |
|
||| |||||||||| |||||||||||||||| | ||| || ||||||| |||||||||||| |||||||||||||||||||| |||| | |||||| |
|
|
| T |
4617497 |
ttgcaattggccaaaccccaagcaaattccagtaattgctcgggtgtcataactgtaatgctgccgaaattcacataaacaactgatcccggctcct |
4617593 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #4
Raw Score: 154; E-Value: 1e-81
Query Start/End: Original strand, 17 - 302
Target Start/End: Original strand, 4592506 - 4592791
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||||| || |||| ||| || |||||||| || || |
|
|
| T |
4592506 |
cagcacatatactttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaagggtggtttaatacttgctcttgaggacaccagctcgc |
4592605 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||| ||||| | || ||||||||||||||| ||||||||||||||||||||||| |||||| |
|
|
| T |
4592606 |
gattacgcctctatctgaaatttcattcacaaactccgatgacaaaacaattgtgccaccaatgacaagatcaggcctaatgatccacaaaaaaggttta |
4592705 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
302 |
Q |
| |
|
||| |||||||||| ||||||||||| || |||| || ||| ||| |||||||| ||| ||||||||||||||||||||||| |
|
|
| T |
4592706 |
ttgcaattggccaaaccccaagcaaactctaacattttctcttcattcataactgtaaggctgccgaaattcacataaacaacgga |
4592791 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #5
Raw Score: 150; E-Value: 3e-79
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 4514978 - 4514753
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| ||||| || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4514978 |
cagcgcatatgctctcagtggttgagttccatccgcaatgagtcaagaatccgccaattgaagggtggttcaaaactttctcttgtggacaccaacttgc |
4514879 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||| ||||||||||||||||||||| || ||||| |||||||||||||||||||| ||||||||||||||||| ||||| | ||| |
|
|
| T |
4514878 |
tattaggcctctatctgcaatttcattcacaaactcagacgacaaaaccactgagccaccaatgacaagatcaggcctaatgatccataaaaaggttttc |
4514779 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaa |
242 |
Q |
| |
|
||| ||||||||| ||||||||||| |
|
|
| T |
4514778 |
ttgctattggccaaaccccaagcaaa |
4514753 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #6
Raw Score: 146; E-Value: 7e-77
Query Start/End: Original strand, 17 - 302
Target Start/End: Complemental strand, 4613575 - 4613290
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||| || |||| ||| || |||||||| || || |
|
|
| T |
4613575 |
cagcacatatgctttcagtggttgagttccatccacaatgagtcaagaatccgccaattgaagggtggtttaatacttgctcttgaggacaccagctcgc |
4613476 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||| ||||| |||||||| ||||||||||| ||||||||||||||||||||||| |||| |
|
|
| T |
4613475 |
gattaggcctctatctgaaatttcattcacaaactctgatgacaaaacaactgagccgccaatgacaagatcaggcctaatgatccacaaaaagggttgc |
4613376 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
302 |
Q |
| |
|
||| ||| ||||| ||||||||||| || || |||| ||||| |||| ||| || ||||| || |||||||||||||||||||| |
|
|
| T |
4613375 |
ttgctattcgccaaaccccaagcaaactctaatagtttttctgcagtcataacggtcatgctcccaaaattcacataaacaacgga |
4613290 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #7
Raw Score: 141; E-Value: 6e-74
Query Start/End: Original strand, 19 - 299
Target Start/End: Original strand, 4598448 - 4598728
Alignment:
| Q |
19 |
gcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaa |
118 |
Q |
| |
|
||||||||||||||||||||||||||||||||||||||||| |||||||| || |||||||| ||||| || |||| ||| || ||||||| ||||||| |
|
|
| T |
4598448 |
gcacatatactttcagtggttgagttccatccgcaatgagttaagaatccaccaattgaaggatggtttaatacttgctcttgcagacaccagcttgcaa |
4598547 |
T |
|
| Q |
119 |
ttaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttatt |
218 |
Q |
| |
|
||||||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| || |
|
|
| T |
4598548 |
ctaagcctctatctgaaatttcattcacaaactccgatgacaaaacaaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttctt |
4598647 |
T |
|
| Q |
219 |
gtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
| ||||||||| ||||||||||| || |||| | ||||| |||| || || ||||| || ||||||||||||||||| |
|
|
| T |
4598648 |
gctattggccaaaccccaagcaaagtctaacaacttttctgcagtcatcaccgttatgctcccaaaattcacataaacaac |
4598728 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #8
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 3172016 - 3172241
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
||||||||| |||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| |||||||| || |||||||||||||| |
|
|
| T |
3172016 |
cagcacatacactttccgtggttgagttccatccgcagtgagtcaagaatccgccaattgaaggatggttcaacactttctcttgcggacaccaacttgc |
3172115 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||| ||||| || ||||||||||||||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
3172116 |
tattaggcctctatctgaaatttcattcacaaactccgatgacaaaacaaccgagccaccaatgacaagatcaggcctaataatccacaaaaagggtttc |
3172215 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaa |
242 |
Q |
| |
|
||| ||||| || ||||||||||| |
|
|
| T |
3172216 |
ttgctgttggctaaaccccaagcaaa |
3172241 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #9
Raw Score: 134; E-Value: 1e-69
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 4574583 - 4574808
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| || | |||| |||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4574583 |
cagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgaaaggtggttcaatactttctcttgtggacaccaacttgc |
4574682 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||||||||| |||| ||| |||||||| ||||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4574683 |
tattagtcctctatctgaaatttctttcaaaaaatcagatgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttt |
4574782 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaa |
242 |
Q |
| |
|
||| |||||||| ||||||||||| |
|
|
| T |
4574783 |
ttgctgttggccaaaccccaagcaaa |
4574808 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #10
Raw Score: 132; E-Value: 2e-68
Query Start/End: Original strand, 17 - 304
Target Start/End: Original strand, 4480968 - 4481255
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
||||||||| ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| |
|
|
| T |
4480968 |
cagcacatacactttcagtggttgagttccatccgcaatgagtcaagaatccgccgattgaagggtggttcaaaactttctcttgtggacaccaacttgc |
4481067 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||| ||||||||| |||| | |||||||||| || || |||||||||||||||||||| | || |||||| ||||||||||| ||| |
|
|
| T |
4481068 |
tattaggcctctatttgaaatttctttcaaatactcagatgacaacaccactgagccaccaatgacaagattagacctaataatccacaaaaagtttttt |
4481167 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
304 |
Q |
| |
|
||| |||||| || ||||||||||| || || |||| ||| | | || || ||| ||||| || ||||| ||||||||||| |||| |
|
|
| T |
4481168 |
ttgctattggcaaaaccccaagcaaactctaagagtttctcttgagacataattgtgatgctgccaaaatttacataaacaacagatc |
4481255 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #11
Raw Score: 130; E-Value: 2e-67
Query Start/End: Original strand, 17 - 242
Target Start/End: Original strand, 4560781 - 4561005
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| || | ||| ||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
4560781 |
cagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgactgatgggtggttcaatactttctcttgtggacaccaacttgc |
4560880 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||||||||| |||| ||| |||||||| ||||| || ||||||||||||||||| ||||||||||||||||| ||||||||||| |
|
|
| T |
4560881 |
tattagtcctctatctgaaatttctttca-aaaatcagatgagaaaaccaccgagccaccaatgacaagatcaggcctaatgatccataaaaatggtttc |
4560979 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaa |
242 |
Q |
| |
|
||| |||||||| ||||||||||| |
|
|
| T |
4560980 |
ttgctgttggccaaaccccaagcaaa |
4561005 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #12
Raw Score: 128; E-Value: 4e-66
Query Start/End: Original strand, 17 - 304
Target Start/End: Original strand, 4461398 - 4461685
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||| ||||||||||||||||| || |||||||||||||||| |||| ||| || |||||||| ||||| |
|
|
| T |
4461398 |
cagcacatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagcttgc |
4461497 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||||||||| |||| | ||||| ||||||||||| ||||||||||||||||| ||||| ||||| |
|
|
| T |
4461498 |
tattaggcctctatctgaaatttcattcacaaactcagatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccataaaaagggtttc |
4461597 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
304 |
Q |
| |
|
||| || ||||| ||||||||||| || |||||||| || || |||| |||||| ||||| || ||||| ||||| ||||| |||| |
|
|
| T |
4461598 |
ttgctatcagccaaaccccaagcaaactctaacagttgatcaggagtcataactgtgatgctgccaaaatttacatagacaacagatc |
4461685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #13
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 305
Target Start/End: Complemental strand, 4267023 - 4266735
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| |||||||||||||| |||||||||||||||||||||||||| || || |||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
4267023 |
cagcacatatgctttcagtggttgaattccatccgcaatgagtcaagaatccaccaatcgaagggtggttcaacactttatcttgtggacaccaacttgc |
4266924 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||||||||| || | ||| |||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||||||||| || || |
|
|
| T |
4266923 |
tattagtcctctatctgaaatttctttaaaaaaatcagatgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttc |
4266824 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatct |
305 |
Q |
| |
|
||| |||||||| ||||||||||| || || || | ||| ||| || |||||| ||||| || ||||| ||||||||||| ||||| |
|
|
| T |
4266823 |
ttgctgttggccaaaccccaagcaaactctaagagcttctctcgtgacataactgtgatgctaccaaaatttacataaacaacagatct |
4266735 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #14
Raw Score: 124; E-Value: 9e-64
Query Start/End: Original strand, 22 - 313
Target Start/End: Complemental strand, 4299673 - 4299382
Alignment:
| Q |
22 |
catatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaatta |
121 |
Q |
| |
|
||||| |||||| |||||||||||||||| || |||||||||||||| || |||||||||||||||| |||| || ||||||||| | ||||| ||| |
|
|
| T |
4299673 |
catatgctttcaatggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcagtacttgttcttgtggacactagcttgcggtta |
4299574 |
T |
|
| Q |
122 |
agcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgta |
221 |
Q |
| |
|
|||||||| ||||||||||||| ||||||||||||| |||| | |||| |||||||||||||| |||||||||||||||||||||||||| || | |
|
|
| T |
4299573 |
ggcctctatttgaaatttcattctcaaactcagatgacaaaataaacaagccgccaatgacaaggtctggcctaatgatccacaaaaatggtttcctgca |
4299474 |
T |
|
| Q |
222 |
attggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctctgctcct |
313 |
Q |
| |
|
||||||||| |||||||||| || |||||||| ||||| |||| |||||||| ||| || ||||||||||||||||| |||| | |||||| |
|
|
| T |
4299473 |
attggccaaaccccaagcaatctctaacagttgctctggagtcataactgtaacgctgccaaaattcacataaacaaccgatcccggctcct |
4299382 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #15
Raw Score: 123; E-Value: 4e-63
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 4506132 - 4506414
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||| || || |||||||| |||| |||||| ||||| |
|
|
| T |
4506132 |
cagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtgatttaacactttctcttgtgaacaccagcttgc |
4506231 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|| | || |||||||||||||||||| ||||||| || || ||||| |||||||||||||| ||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4506232 |
tataaggcttctatctgaaatttcatttgcaaactctgaagacaaaaccactgagccaccaattacaagatcaggcctaatgatccacaaaaagggtttc |
4506331 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
||| ||||||||| ||||||||||| || || | || || || | || || ||| |||||||| ||||||||||||||||| |
|
|
| T |
4506332 |
ttgctattggccaaaccccaagcaaactctaaaaatttctccggagacataattgtgatgcttccaaaattcacataaacaac |
4506414 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #16
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 302
Target Start/End: Original strand, 4557400 - 4557685
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
||||| |||| ||||||||||||||||||||||| ||||||||||||||||| || |||||||| ||||| || |||| ||| || || ||||| | || |
|
|
| T |
4557400 |
cagcagatatgctttcagtggttgagttccatccacaatgagtcaagaatccaccaattgaaggatggtttaatacttgctcttgcgggcaccagcccgc |
4557499 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||||||||||||| |||||||| ||||| ||||| ||||||||||| |||||||| || |||||||||||||||||||| |||| |
|
|
| T |
4557500 |
gattaggcctctatctgaaatttcattgacaaactccgatgacaaaacaactgagccaccgatgacaagatcgggcctaatgatccacaaaaagggttgc |
4557599 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
302 |
Q |
| |
|
||| ||| || || ||||| ||||| || ||||||| ||||| |||| |||||| ||||| || |||||||||||||||||||| |
|
|
| T |
4557600 |
ttgctatttgctaaaccccatgcaaactctaacagtttttctgccgtcataactgtcatgctcccaaaattcacataaacaacgga |
4557685 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #17
Raw Score: 118; E-Value: 3e-60
Query Start/End: Original strand, 17 - 302
Target Start/End: Original strand, 4585911 - 4586196
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||| || |||||||||||||| || ||||||||||||||||| |||| ||| || || ||||||| || |
|
|
| T |
4585911 |
cagcacatatgctttcagtggttgagttccatccacagtgagtcaagaatccaccaattgaagggtggttcaatacttgctcttgcgggcaccaacccgc |
4586010 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||| |||||||||||| ||||| | || |||||||||||||| ||||| ||||||||||| ||||| ||| |
|
|
| T |
4586011 |
gattaggcctctatctgaaatttcattcttaaactcagatgacaaaaccaaggaaccaccaatgacaagatcaggtctaatgatccataaaaaatgttgc |
4586110 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
302 |
Q |
| |
|
||| ||||||||| ||||||||||| || || |||| ||||| |||| |||||| |||| || |||||||||||||||||||| |
|
|
| T |
4586111 |
ttgctattggccaaaccccaagcaaactctaatagtttttctgtagtcataactgttgtgctcccaaaattcacataaacaacgga |
4586196 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #18
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 295
Target Start/End: Original strand, 4457869 - 4458148
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| ||||| ||||||||||||||||| ||||| ||||||||||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
4457869 |
cagcgcatatgctttcagtggttgagtttcatccacaatgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgc |
4457968 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatgg-ttt |
215 |
Q |
| |
|
|||||||||||||| ||| ||||||||||||| || ||||| ||||| || ||||||||||||||||| ||||||||| | ||||||||||| || ||| |
|
|
| T |
4457969 |
tattaagcctctatcagaagtttcattcacaaaatccgatgacaaaacaaccgagccaccaatgacaagatcaggcctagttatccacaaaaaaggtttt |
4458068 |
T |
|
| Q |
216 |
attgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaa |
295 |
Q |
| |
|
||| |||||||| ||||||||||||| || || | ||| | | || |||||| |||||||| ||||| ||||||| |
|
|
| T |
4458069 |
cttgctgttggccaaaacccaagcaaattctaagagcttctcttgagacataactgtgatgcttccaaaatttacataaa |
4458148 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #19
Raw Score: 116; E-Value: 5e-59
Query Start/End: Original strand, 17 - 304
Target Start/End: Complemental strand, 4504254 - 4503967
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
||||||| | |||||||||||||||||||||||| ||||||||||||||||| || ||||||||||||||||| ||||| || ||||||||||||||||| |
|
|
| T |
4504254 |
cagcacaaacactttcagtggttgagttccatccacaatgagtcaagaatcctccgattgaagggtggttcaacactttatcttgtggacaccaacttgc |
4504155 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
| | ||||||| ||| ||||||||||||| |||||||| || || ||||||||||||| ||||| ||||||||||| ||||||||||| ||||| |
|
|
| T |
4504154 |
tacaagtcctctattagaagtttcattcacaaaatcagatgacaacacctctgagccaccaataacaagatcaggcctaataatccacaaaaaaggtttc |
4504055 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
304 |
Q |
| |
|
||| ||||||||| ||||||||||| || |||| || ||| | || |||||||||||| || ||||| ||||||||||| |||| |
|
|
| T |
4504054 |
ttgctattggccaaaccccaagcaaactctaacaatttatcttaagacataactgtaatgctgccaaaatttacataaacaacagatc |
4503967 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #20
Raw Score: 115; E-Value: 2e-58
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 4579707 - 4579989
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
||||| |||| ||||||||| ||||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||| || |||||||| || | |
|
|
| T |
4579707 |
cagcagatatgctttcagtgattgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgcggacaccagctcgt |
4579806 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||||||||||| ||||| ||||| ||||||| || |||||||| || |||||||||||||||||||| |||| |
|
|
| T |
4579807 |
tattaggcctctatctgaaatttcattcacaaactccgatgacaaaacagctgagccgccgatgacaagatcgggcctaatgatccacaaaaagggttgc |
4579906 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
||| ||| || || ||||| ||||| || ||||||| ||||| |||| |||||| | ||| || ||||||||||||||||| |
|
|
| T |
4579907 |
ttgctatttgctaaaccccatgcaaactctaacagtttttctgcagtcataactgtcaagctcccaaaattcacataaacaac |
4579989 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #21
Raw Score: 114; E-Value: 8e-58
Query Start/End: Original strand, 17 - 298
Target Start/End: Original strand, 4622417 - 4622698
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| ||||| |||||||| |||||||| ||||||||||||||||| || |||| ||||||||| | |||| ||| ||||||||||||| ||| |
|
|
| T |
4622417 |
cagcacatatgctttcggtggttgaattccatccacaatgagtcaagaatccaccaattgcagggtggttaagtacttcctcttgtggacaccaacctgc |
4622516 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||| |||||||||||||| ||||||||||||| |||| | ||||| || |||||||||||||||||||||||||||||||| ||||| |
|
|
| T |
4622517 |
gattaggcctctacctgaaatttcattctcaaactcagatgacaaaataaacgagccgcccatgacaaggtcaggcctaatgatccacaaaaagggtttc |
4622616 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaa |
298 |
Q |
| |
|
||| || ||||| ||||||||||| || || ||||| ||| | |||| ||||||||||| || |||||||| ||||||| |
|
|
| T |
4622617 |
ttgctatcagccaaaccccaagcaaactctaatagttgatctcgagtcatcactgtaatgctgccaaaattcacgtaaacaa |
4622698 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #22
Raw Score: 113; E-Value: 3e-57
Query Start/End: Original strand, 40 - 296
Target Start/End: Original strand, 4516619 - 4516875
Alignment:
| Q |
40 |
gagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaattt |
139 |
Q |
| |
|
||||||||||| ||||||||||||||||| || | |||||| |||||||| |||||||| || |||||||| ||||| |||| ||||||||| ||| ||| |
|
|
| T |
4516619 |
gagttccatccacaatgagtcaagaatcctccaactgaaggatggttcaacactttctcttgcggacaccagcttgctattacgcctctatccgaagttt |
4516718 |
T |
|
| Q |
140 |
cattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaacccccaagc |
239 |
Q |
| |
|
|||||||||| || ||||| |||| || ||||||||||||||||||||||||||||| ||||||||||| ||||| ||| |||||||| |||||||| |
|
|
| T |
4516719 |
cattcacaaaatcggatgacaaaataaccgagccaccaatgacaaggtcaggcctaataatccacaaaaaaggtttcttgctgttggccaaaccccaagc |
4516818 |
T |
|
| Q |
240 |
aaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaac |
296 |
Q |
| |
|
|| || |||||||| ||||| |||| || || |||||||| |||||||||||||| |
|
|
| T |
4516819 |
gaactctaacagttgatctggagtcatgaccgtgatgcttccaaaattcacataaac |
4516875 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #23
Raw Score: 112; E-Value: 1e-56
Query Start/End: Original strand, 23 - 302
Target Start/End: Original strand, 4571253 - 4571532
Alignment:
| Q |
23 |
atatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaa |
122 |
Q |
| |
|
|||| ||||| || |||||||||||||| || ||||||||||| || || |||||||| |||||||| |||||||| || | ||||||| ||||||| |
|
|
| T |
4571253 |
atatgctttcggtcgttgagttccatccacagtgagtcaagaaaccaccaattgaaggatggttcaatactttctcttgcgagcaccaaccagcaattag |
4571352 |
T |
|
| Q |
123 |
gcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaa |
222 |
Q |
| |
|
|||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||| || |||||||||||||||||||| ||| ||| | |
|
|
| T |
4571353 |
gcctctatctgaaatttcattcacaaactccgatgacaaaacaactgagccaccaatgacaagatcgggcctaatgatccacaaaaagagttgcttgcta |
4571452 |
T |
|
| Q |
223 |
ttggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
302 |
Q |
| |
|
|| || || ||||| ||||| || ||||||| ||||| |||| |||||| |||| || |||||||||||||||||||| |
|
|
| T |
4571453 |
tttgctaaaccccatgcaaactctaacagtttttctgaagtcataactgtcctgctcccaaaattcacataaacaacgga |
4571532 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #24
Raw Score: 111; E-Value: 5e-56
Query Start/End: Original strand, 17 - 299
Target Start/End: Original strand, 4626226 - 4626508
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| ||||| |||||| |||||||||||||||| |||||||| |||||||| || |||||||| ||||||| |||||||| || |||||||| ||||| |
|
|
| T |
4626226 |
cagcgcatatgctttcaatggttgagttccatccacaatgagttaagaatccaccaattgaaggatggttcagtactttctcttgcggacaccagcttgc |
4626325 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||| ||||||| ||||| ||| | |||||||||||| ||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4626326 |
gattaggcctctatctgaaatttcattctcaaactcggatgacgaaataaatgagccaccaatcacaagatcaggcctaatgatccacaaaaagggtttc |
4626425 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
||| || ||||| ||||||||||| || ||||||| | ||| |||| |||| ||| ||| || || |||||||||||||| |
|
|
| T |
4626426 |
ttgctatcagccaaaccccaagcaaactctaacagtttctgtggagtcataactataacgctgccaaagttcacataaacaac |
4626508 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #25
Raw Score: 109; E-Value: 8e-55
Query Start/End: Original strand, 19 - 299
Target Start/End: Complemental strand, 4260009 - 4259729
Alignment:
| Q |
19 |
gcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaa |
118 |
Q |
| |
|
||||| || |||||| ||||||||||||||||||||||||| |||||||| || | ||||| |||||||| |||| ||| || |||||||| || || | |
|
|
| T |
4260009 |
gcacaaatgctttcaatggttgagttccatccgcaatgagttaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccagctcgcga |
4259910 |
T |
|
| Q |
119 |
ttaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttatt |
218 |
Q |
| |
|
||| ||||||||| ||||||||| || ||||||||||||| |||| | ||||||||||| | |||||||||||||||||||||||||| ||||| || |
|
|
| T |
4259909 |
ttaggcctctatccgaaatttcactctcaaactcagatgacaaaataaaggagccaccaataatgaggtcaggcctaatgatccacaaaaagggtttctt |
4259810 |
T |
|
| Q |
219 |
gtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
| ||||||||| ||||||||||| || || | ||| ||||| |||| |||||||||||| || |||||||| |||||||| |
|
|
| T |
4259809 |
gctattggccaatccccaagcaaactctaaaaattgatctggagtcataactgtaatgctgccaaaattcacgtaaacaac |
4259729 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #26
Raw Score: 108; E-Value: 3e-54
Query Start/End: Original strand, 17 - 304
Target Start/End: Original strand, 4470078 - 4470365
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| ||||| ||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||| || |||||||| | | |
|
|
| T |
4470078 |
cagcgcatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcagtacttgctcttgaggacaccagttcac |
4470177 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||| |||| |||| ||| ||||| ||||| || ||||| ||||||||||| || |||||||||||||||||||| |||| |
|
|
| T |
4470178 |
gattaggcctctatctgaaattccatttacaatctctgatgagaaaactaccgagccgccaatgacaagatcgggcctaatgatccacaaaaagggttgc |
4470277 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
304 |
Q |
| |
|
||| ||| ||||| ||||||||||| || ||||||| ||||| | || |||||| | ||| |||||||| ||||| ||||| |||| |
|
|
| T |
4470278 |
ttgctatttgccaaaccccaagcaaactctaacagtttctctggagacataactgtgacgctgccgaaatttacatagacaacagatc |
4470365 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #27
Raw Score: 102; E-Value: 1e-50
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 4490212 - 4489987
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
||||||||||||| || || ||||||||||||| ||||||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||||||||| |
|
|
| T |
4490212 |
cagcacatatactctccatgattgagttccatccacaatgagtcaagaatccaccaattgaagggtgattcaataccttctcttgtggacaccaacttgc |
4490113 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||||||||| |||| ||| |||||||| || || |||||||||||| ||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
4490112 |
tattagtcctctatctgaaatttctttcaaaaaatcagatgacaacacctgtgagccaccaataacaagatcaggcctaatgatccacaaaaagggtttc |
4490013 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaa |
242 |
Q |
| |
|
||| |||||||| ||||| ||||| |
|
|
| T |
4490012 |
ttgctgttggccaaaccccatgcaaa |
4489987 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #28
Raw Score: 85; E-Value: 2e-40
Query Start/End: Original strand, 19 - 299
Target Start/End: Complemental strand, 4256466 - 4256199
Alignment:
| Q |
19 |
gcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaa |
118 |
Q |
| |
|
||||| || |||||| |||||||||||||||| ||||||||||||||||| || | ||||| |||||||| |||| ||| || ||||||||||| | | |
|
|
| T |
4256466 |
gcacaaatgctttcaatggttgagttccatcctcaatgagtcaagaatccaccaactgaagagtggttcagtacttgctcttgcggacaccaactctcga |
4256367 |
T |
|
| Q |
119 |
ttaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttatt |
218 |
Q |
| |
|
||| |||||||| |||| ||||||||| |||| | |||||||||||||| ||||||||||||||||| |||||||||||||| || |
|
|
| T |
4256366 |
ttagtcctctatccgaaa-------------ctcagatgacaaaataaaggagccaccaatgacgaggtcaggcctaatgatacacaaaaatggtttctt |
4256280 |
T |
|
| Q |
219 |
gtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
| ||||||||| ||||||||||| || |||||||| ||||| |||| |||||||||||| || |||||||| |||||||| |
|
|
| T |
4256279 |
gctattggccaatccccaagcaaactctaacagttgatctggagtcataactgtaatgctgccaaaattcacgtaaacaac |
4256199 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #29
Raw Score: 84; E-Value: 7e-40
Query Start/End: Original strand, 40 - 215
Target Start/End: Original strand, 4568354 - 4568529
Alignment:
| Q |
40 |
gagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaattt |
139 |
Q |
| |
|
||||||||||| |||||||||||||||| || | ||||||||||||||| |||| ||| || |||||||| ||||| ||| ||||||||| ||| || |
|
|
| T |
4568354 |
gagttccatccacaatgagtcaagaatcgtccaactgaagggtggttcaacacttgctcttgcggacaccagcttgctatttggcctctatccgaagttc |
4568453 |
T |
|
| Q |
140 |
cattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttt |
215 |
Q |
| |
|
||||||||||||| ||||| |||| |||||||||||||||||||| | ||||||||||||||||||||| ||||| |
|
|
| T |
4568454 |
cattcacaaactcggatgacaaaataactgagccaccaatgacaagctaaggcctaatgatccacaaaaaaggttt |
4568529 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #30
Raw Score: 53; E-Value: 2e-21
Query Start/End: Original strand, 37 - 133
Target Start/End: Original strand, 4493250 - 4493346
Alignment:
| Q |
37 |
gttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctg |
133 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || || ||| ||||||||| | |||||| |||||||||||||| ||||||| ||||||||||| |
|
|
| T |
4493250 |
gttgagttccatccacaatgagtcaagaatccaccaatcgaatggtggttcagcagtttctcttgtggacaccaactagcaattaggcctctatctg |
4493346 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr6; HSP #31
Raw Score: 38; E-Value: 0.000000000002
Query Start/End: Original strand, 28 - 203
Target Start/End: Complemental strand, 4391973 - 4391794
Alignment:
| Q |
28 |
ctttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaatta---ag- |
123 |
Q |
| |
|
|||||| ||| |||||| ||||| ||||| || |||||||| | ||| ||||||||||||| |||| ||| | |||||||| ||||| | || || |
|
|
| T |
4391973 |
ctttcaatgggtgagtttcatccacaatgcgttaagaatccacaaattcaagggtggttcaatacttgctctttcggacaccatcttgcgactagataga |
4391874 |
T |
|
| Q |
124 |
cctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatcca |
203 |
Q |
| |
|
||||||||||||||||||||| || ||||| || | ||||| ||| | ||||||||||||||| ||||||||||||| |
|
|
| T |
4391873 |
cctctatctgaaatttcattctcatactcatataacaaaacacatgacctgccaatgacaaggtcaagcctaatgatcca |
4391794 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr3 (Bit Score: 178; Significance: 5e-96; HSPs: 1)
Name: chr3
Description:
Target: chr3; HSP #1
Raw Score: 178; E-Value: 5e-96
Query Start/End: Original strand, 17 - 306
Target Start/End: Original strand, 1281389 - 1281678
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||||||||||||| |
|
|
| T |
1281389 |
cagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccgattgaagggtggttcaacactttctcttgtggacaccaacttgc |
1281488 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||| |||| |||||||| |||| |||||||| ||||||||||| ||||||||| ||||||||||||||||||| |
|
|
| T |
1281489 |
tattaggcctctatctgaaatttcattcgcaaagtcagatgacaaaatcactgagccgccaatgacaagatcaggcctagtgatccacaaaaatggtttc |
1281588 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatctc |
306 |
Q |
| |
|
||| ||| |||| ||||||||||||||| ||||| ||||| |||| ||||||||||||||||||||||||||||||||| |||||| |
|
|
| T |
1281589 |
ttgctattagccagaccccaagcaaattcctgaagttgctctggagtcataactgtaatgcttccgaaattcacataaacaacagatctc |
1281678 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8 (Bit Score: 164; Significance: 1e-87; HSPs: 3)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 17 - 304
Target Start/End: Original strand, 1674501 - 1674788
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| ||||| |||||||||||||||||||||||||| || |||||||||||||| ||||||||||||||||| |||||||| |||||||||||| ||| |
|
|
| T |
1674501 |
cagcgcatatgctttcagtggttgagttccatccgcagtgtgtcaagaatccgccgattgaagggtggttcaacactttctcttgtggacaccaatttga |
1674600 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||| |||| |||||||||||| ||||| |||||||||||||||||||| ||||||||| ||||||||||||| ||||| |
|
|
| T |
1674601 |
tattaggcctctatctgaaatttctttcataaactcagatgacaaaaccactgagccaccaatgacaagatcaggcctagtgatccacaaaaaaggtttc |
1674700 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatc |
304 |
Q |
| |
|
||| ||| |||||| ||||||||||| ||||| ||||| ||||| |||| ||| ||||||| |||||||||||||||||||| |||| |
|
|
| T |
1674701 |
ttgcaatcggccaaaccccaagcaaactccaatagttgatctggagtcataacaataatgctaccgaaattcacataaacaaccgatc |
1674788 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #2
Raw Score: 110; E-Value: 2e-55
Query Start/End: Original strand, 17 - 242
Target Start/End: Complemental strand, 20863700 - 20863475
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| || ||| |||||||||||||||| |||||||| | ||||| || |||||||| |||||||| || ||||| |||||||||||||| || |
|
|
| T |
20863700 |
cagcacatatgctctcaatggttgagttccatccacaatgagttagaaatccaccaattgaaggatggttcaacaccttctcttgtggacaccaactcgc |
20863601 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||||||||| ||||||| |||| || ||||||||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
20863600 |
gattaggcctctatctgaaatttcattcacaaacgcagatgaaaaaatcaccgagccaccaatgacaagatcaggcctaatgatccacaaaaagggtttc |
20863501 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaa |
242 |
Q |
| |
|
||| |||||||| ||||| ||||| |
|
|
| T |
20863500 |
ttgctgttggccaaaccccatgcaaa |
20863475 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr8; HSP #3
Raw Score: 90; E-Value: 2e-43
Query Start/End: Original strand, 17 - 302
Target Start/End: Complemental strand, 16686124 - 16685839
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
||||| |||||||||||||||||||||||||||| |||||||| |||||||| || |||||||| ||||| || |||| ||| || || ||||| || || |
|
|
| T |
16686124 |
cagcatatatactttcagtggttgagttccatccacaatgagttaagaatccaccgattgaaggatggtttaatacttgctcttgcgggcaccagctcgc |
16686025 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| || ||||||||| ||||||||| |||||||||||| ||||| || || || | ||||||||| |||| |||||||||||| ||| ||| |
|
|
| T |
16686024 |
gattaggcttctatctgagatttcattcttaaactcagatgacaaaaccacggaaccgcaaatgacaagatcagacctaatgatccattgaaaatgttgc |
16685925 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacgga |
302 |
Q |
| |
|
||| ||||| ||| ||||||||||| || || |||| ||||| |||| |||||| ||||| || |||||||||||||||||||| |
|
|
| T |
16685924 |
ttgctattggtcaaaccccaagcaaactctaatagtttttctgcagtcataactgtcatgctcccaaaattcacataaacaacgga |
16685839 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0477 (Bit Score: 152; Significance: 2e-80; HSPs: 1)
Name: scaffold0477
Description:
Target: scaffold0477; HSP #1
Raw Score: 152; E-Value: 2e-80
Query Start/End: Original strand, 20 - 299
Target Start/End: Complemental strand, 4540 - 4261
Alignment:
| Q |
20 |
cacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaat |
119 |
Q |
| |
|
||||||| |||||| |||||||||||||||||||||||||||||||||| || |||||||||||||||| |||| ||| ||||||||||| || ||||| |
|
|
| T |
4540 |
cacatatgctttcaatggttgagttccatccgcaatgagtcaagaatccaccaattgaagggtggttcagtacttgctcttgtggacaccagctcgcaat |
4441 |
T |
|
| Q |
120 |
taagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattg |
219 |
Q |
| |
|
|| |||||||||||||||||||||| ||||||||||||| |||| | ||||| ||||||||||||||||||||||||||||||||||| | ||| || |
|
|
| T |
4440 |
taggcctctatctgaaatttcattctcaaactcagatgacaaaataaacgagccgccaatgacaaggtcaggcctaatgatccacaaaaaggatttctta |
4341 |
T |
|
| Q |
220 |
taattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
|||||| ||| |||||||||| || |||||||| ||||| |||| ||||||||||||||| ||||||||||||||||| |
|
|
| T |
4340 |
caattggtcaaaacccaagcaaactctaacagttgatctggagtcataactgtaatgcttccaaaattcacataaacaac |
4261 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0288 (Bit Score: 135; Significance: 2e-70; HSPs: 1)
Name: scaffold0288
Description:
Target: scaffold0288; HSP #1
Raw Score: 135; E-Value: 2e-70
Query Start/End: Original strand, 17 - 299
Target Start/End: Complemental strand, 3576 - 3294
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| ||||| |||||||||||||| |||||||| ||||||||||||||||| || |||||||||||| ||| |||| ||| ||||||||||| |||| |
|
|
| T |
3576 |
cagcgcatatgctttcagtggttgaattccatccacaatgagtcaagaatccaccaattgaagggtggatcagtacttgctcttgtggacaccagcttgt |
3477 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||||||| |||| || ||||| |||| | ||||| ||||||||||| ||||||||||||||||||||||| ||||| |
|
|
| T |
3476 |
gattaggcctctatctgaaatttcattctcaaattctgatgacaaaataaacgagccgccaatgacaagatcaggcctaatgatccacaaaaacggtttc |
3377 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
||| || |||||| |||||||||||||| |||||||| | ||| |||| |||||||||||| |||||||||||||||||||| |
|
|
| T |
3376 |
ttgctatcggccaaaccccaagcaaattctaacagttgatttggagtcataactgtaatgctgccgaaattcacataaacaac |
3294 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5 (Bit Score: 125; Significance: 2e-64; HSPs: 2)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 125; E-Value: 2e-64
Query Start/End: Original strand, 17 - 305
Target Start/End: Original strand, 24103274 - 24103562
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||||||| ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| || ||||| || ||||||||||||||||| |
|
|
| T |
24103274 |
cagcacatatgctttcagtggttgagttccatccgcaatgagtcaagaatccaccaatcgaagggtggtttaacactttatcttgtggacaccaacttgc |
24103373 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| ||||||||||||| ||| || | ||| |||||||| ||||| |||||||| ||||||||||| ||||||||||| ||||||||||| || || |
|
|
| T |
24103374 |
tattagtcctctatctgaaacttctttaaaaaaatcagatgacaaaacaactgagcccccaatgacaagatcaggcctaattatccacaaaaaagggttc |
24103473 |
T |
|
| Q |
217 |
ttgtaattggccaacccccaagcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaacggatct |
305 |
Q |
| |
|
||| ||||||||| ||||||||||| || || || | ||| ||| || |||||| ||||| || ||||| ||||||||||| ||||| |
|
|
| T |
24103474 |
ttgctattggccaaaccccaagcaaactctaagagcttctctcgtgacataactgtgatgctaccaaaatttacataaacaactgatct |
24103562 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr5; HSP #2
Raw Score: 120; E-Value: 2e-61
Query Start/End: Original strand, 17 - 228
Target Start/End: Complemental strand, 27999956 - 27999745
Alignment:
| Q |
17 |
cagcacatatactttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||| ||||| ||||| |||||||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||| |||||||||||| ||| |
|
|
| T |
27999956 |
cagcgcatatgctttcggtggttgagttccatccgcagtgagtcaagaacccgctgattgaagggtggttcaaaactttctcttgtggacaccaatttga |
27999857 |
T |
|
| Q |
117 |
aattaagcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttta |
216 |
Q |
| |
|
|||| |||||||||||||||||| ||| |||||||||||| ||||| |||||||||||||||||||| | ||||||| ||||||||||||| ||||| |
|
|
| T |
27999856 |
tattaggcctctatctgaaatttctttcctaaactcagatgacaaaaccactgagccaccaatgacaagattaggcctagtgatccacaaaaaaggtttc |
27999757 |
T |
|
| Q |
217 |
ttgtaattggcc |
228 |
Q |
| |
|
||| |||||||| |
|
|
| T |
27999756 |
ttgcaattggcc |
27999745 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: chr7 (Bit Score: 119; Significance: 9e-61; HSPs: 1)
Name: chr7
Description:
Target: chr7; HSP #1
Raw Score: 119; E-Value: 9e-61
Query Start/End: Original strand, 37 - 299
Target Start/End: Original strand, 3086715 - 3086977
Alignment:
| Q |
37 |
gttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgcaattaagcctctatctgaaa |
136 |
Q |
| |
|
|||||||||||||| ||||||||||||||||| || ||||||||||| ||||| |||| ||| || |||||||| ||||| |||| ||||||||||||| |
|
|
| T |
3086715 |
gttgagttccatccacaatgagtcaagaatccaccaattgaagggtgattcaatacttgctcttgcggacaccagcttgcgattagacctctatctgaaa |
3086814 |
T |
|
| Q |
137 |
tttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggtttattgtaattggccaaccccca |
236 |
Q |
| |
|
|||| ||| ||||||||||||| | || | ||||| ||||||||||| ||||||||||||||||||||||||||||| ||| ||||||||| ||||| |
|
|
| T |
3086815 |
tttctttctcaaactcagatgacataataaaggagccgccaatgacaagatcaggcctaatgatccacaaaaatggtttcttgctattggccaaacccca |
3086914 |
T |
|
| Q |
237 |
agcaaattccaacagttgttctggtgtcaaaactgtaatgcttccgaaattcacataaacaac |
299 |
Q |
| |
|
|||||| || || ||||| ||| | |||| |||||||||||| || ||| ||||||||||||| |
|
|
| T |
3086915 |
agcaaactctaatagttgctcttgagtcataactgtaatgctgccaaaactcacataaacaac |
3086977 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475 (Bit Score: 37; Significance: 0.000000000007; HSPs: 2)
Name: scaffold0475
Description:
Target: scaffold0475; HSP #1
Raw Score: 37; E-Value: 0.000000000007
Query Start/End: Original strand, 123 - 215
Target Start/End: Complemental strand, 3260 - 3168
Alignment:
| Q |
123 |
gcctctatctgaaatttcattcacaaactcagatgataaaacgactgagccaccaatgacaaggtcaggcctaatgatccacaaaaatggttt |
215 |
Q |
| |
|
||||||||||||| |||||||| |||||||| || | ||| | ||| || |||||||||||||||| |||||||||||||| ||| ||||| |
|
|
| T |
3260 |
gcctctatctgaagtttcattctcaaactcatataacaaagcacatgatccgccaatgacaaggtcagacctaatgatccacacaaagggttt |
3168 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
Target: scaffold0475; HSP #2
Raw Score: 33; E-Value: 0.000000002
Query Start/End: Original strand, 28 - 116
Target Start/End: Complemental strand, 3530 - 3443
Alignment:
| Q |
28 |
ctttcagtggttgagttccatccgcaatgagtcaagaatccgcctattgaagggtggttcaaaactttctcctgtggacaccaacttgc |
116 |
Q |
| |
|
|||||| |||||||||||||||| |||||||| |||||||| || | | ||||||||||||| |||| ||| | |||||||| ||||| |
|
|
| T |
3530 |
ctttcaatggttgagttccatccacaatgagttaagaatccaccaact-aagggtggttcaacacttgctcttacggacaccatcttgc |
3443 |
T |
|
Back To:
[ HSP Overview ] [ Target Overview ] [ Alignment Overview ]
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