View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4081_low_35 (Length: 270)
Name: NF4081_low_35
Description: NF4081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4081_low_35 |
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Alignment Details
Target: chr2 (Bit Score: 225; Significance: 1e-124; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 225; E-Value: 1e-124
Query Start/End: Original strand, 10 - 253
Target Start/End: Complemental strand, 37720733 - 37720489
Alignment:
| Q |
10 |
catcatcacataaa-ttctataaagtattattaccaaattgttctctctaattttaaagtggctcaaattttatagtgatcccaccttggtctataaggc |
108 |
Q |
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| T |
37720733 |
catcatcacataaaattctatagagtattattaccaaattgttctctctaattttaaagtggctcaaattttatagtgatcccaccttggtctataaggc |
37720634 |
T |
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| Q |
109 |
ttaaattgtattctcaatagttttagaactacaacatttctaaagctgaattcaaaatctgaaaatgattttttaccaattcatgaaagtgttcttgagc |
208 |
Q |
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|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
37720633 |
ttaaattgtattctcaatagttttagaactactacatttctaaagctgaattcaaaatctgaaaatgattttttaccaattcatgaaagtgttcttgagc |
37720534 |
T |
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| Q |
209 |
aataaattgcacaagattcctacttatttcaattatttgttcatg |
253 |
Q |
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|||||||||||||||||||||||||||||||||||||| |||||| |
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| T |
37720533 |
aataaattgcacaagattcctacttatttcaattatttattcatg |
37720489 |
T |
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