View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4081_low_8 (Length: 472)

Name: NF4081_low_8
Description: NF4081
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4081_low_8
NF4081_low_8
[»] chr2 (43 HSPs)
chr2 (17-379)||(37719841-37720203)
chr2 (351-457)||(24727930-24728036)
chr2 (17-125)||(28898041-28898149)
chr2 (29-125)||(1110266-1110362)
chr2 (27-125)||(42182957-42183055)
chr2 (27-125)||(37228567-37228665)
chr2 (17-125)||(15508982-15509090)
chr2 (27-125)||(4964687-4964785)
chr2 (214-313)||(24727821-24727920)
chr2 (17-79)||(42182896-42182958)
chr2 (36-125)||(31395468-31395557)
chr2 (17-92)||(27968925-27969000)
chr2 (17-92)||(28091587-28091662)
chr2 (17-92)||(28101819-28101894)
chr2 (17-79)||(1107045-1107107)
chr2 (17-79)||(4964784-4964846)
chr2 (37-119)||(24895291-24895373)
chr2 (29-79)||(28898148-28898198)
chr2 (36-79)||(45554593-45554636)
chr2 (17-75)||(6980235-6980293)
chr2 (17-79)||(31395556-31395618)
chr2 (17-71)||(37228505-37228559)
chr2 (17-92)||(20951613-20951686)
chr2 (29-76)||(11539442-11539489)
chr2 (46-125)||(33746953-33747032)
chr2 (29-92)||(37398830-37398893)
chr2 (27-125)||(6315726-6315824)
chr2 (40-122)||(21447175-21447257)
chr2 (38-79)||(9470109-9470150)
chr2 (17-79)||(1110205-1110267)
chr2 (17-79)||(15508921-15508983)
chr2 (37-78)||(17188092-17188133)
chr2 (19-76)||(40535104-40535161)
chr2 (30-79)||(44274254-44274303)
chr2 (39-79)||(26767872-26767912)
chr2 (36-76)||(42579771-42579811)
chr2 (36-79)||(3804610-3804653)
chr2 (26-65)||(10339782-10339821)
chr2 (36-79)||(18511320-18511363)
chr2 (38-125)||(38104316-38104403)
chr2 (40-78)||(19427359-19427397)
chr2 (39-73)||(30718443-30718477)
chr2 (18-75)||(8009521-8009578)
[»] chr8 (37 HSPs)
chr8 (250-457)||(7423522-7423729)
chr8 (253-443)||(25877427-25877617)
chr8 (27-125)||(35689548-35689646)
chr8 (17-125)||(13407328-13407436)
chr8 (36-124)||(33417751-33417839)
chr8 (29-125)||(1205895-1205991)
chr8 (27-79)||(35689497-35689549)
chr8 (57-125)||(28211930-28211998)
chr8 (17-79)||(32072104-32072166)
chr8 (36-125)||(6387629-6387718)
chr8 (29-121)||(7599438-7599530)
chr8 (17-125)||(34303442-34303550)
chr8 (40-79)||(34861298-34861337)
chr8 (29-79)||(7599533-7599583)
chr8 (36-79)||(1977284-1977327)
chr8 (36-79)||(13856506-13856549)
chr8 (17-63)||(1205834-1205880)
chr8 (17-79)||(23685138-23685200)
chr8 (36-77)||(9952870-9952911)
chr8 (17-118)||(12212129-12212230)
chr8 (17-118)||(12456557-12456658)
chr8 (36-81)||(44709297-44709342)
chr8 (36-76)||(17499347-17499387)
chr8 (47-79)||(31301152-31301184)
chr8 (40-79)||(6387591-6387630)
chr8 (28-79)||(8914789-8914840)
chr8 (17-119)||(23142822-23142921)
chr8 (29-76)||(23142937-23142984)
chr8 (36-79)||(28413980-28414023)
chr8 (36-79)||(45246460-45246503)
chr8 (36-78)||(25915146-25915188)
chr8 (41-79)||(35797426-35797464)
chr8 (36-81)||(16441830-16441875)
chr8 (72-125)||(43026359-43026412)
chr8 (40-77)||(45218630-45218667)
chr8 (15-79)||(13407435-13407499)
chr8 (39-79)||(39023459-39023499)
[»] chr6 (27 HSPs)
chr6 (214-452)||(279545-279783)
chr6 (17-125)||(19090219-19090327)
chr6 (17-125)||(10060927-10061035)
chr6 (17-112)||(19737439-19737534)
chr6 (40-125)||(35128750-35128835)
chr6 (27-79)||(19090326-19090378)
chr6 (17-79)||(6531409-6531471)
chr6 (39-97)||(9940387-9940445)
chr6 (29-79)||(19737546-19737596)
chr6 (36-125)||(373467-373556)
chr6 (36-79)||(34905362-34905405)
chr6 (17-79)||(35128834-35128896)
chr6 (19-79)||(373408-373468)
chr6 (19-79)||(21987301-21987361)
chr6 (36-79)||(445844-445887)
chr6 (36-79)||(4595768-4595811)
chr6 (46-125)||(6992304-6992383)
chr6 (302-405)||(29857383-29857484)
chr6 (28-79)||(31116235-31116286)
chr6 (40-106)||(4595829-4595895)
chr6 (49-121)||(12794850-12794922)
chr6 (36-79)||(12327316-12327359)
chr6 (27-74)||(17226645-17226692)
chr6 (36-74)||(8441953-8441991)
chr6 (36-74)||(8450757-8450795)
chr6 (49-78)||(12488156-12488185)
chr6 (36-72)||(10133276-10133312)
[»] chr4 (49 HSPs)
chr4 (214-457)||(42545368-42545611)
chr4 (216-355)||(36513999-36514138)
chr4 (253-428)||(25891816-25891991)
chr4 (248-426)||(54117004-54117182)
chr4 (340-458)||(54713243-54713361)
chr4 (17-125)||(44832531-44832639)
chr4 (36-125)||(16178651-16178740)
chr4 (17-125)||(51206111-51206219)
chr4 (17-125)||(39016731-39016839)
chr4 (17-125)||(13070008-13070116)
chr4 (17-125)||(42862425-42862533)
chr4 (29-125)||(37315628-37315724)
chr4 (274-341)||(54713027-54713094)
chr4 (27-125)||(30866946-30867044)
chr4 (27-76)||(47237855-47237904)
chr4 (28-124)||(2187829-2187924)
chr4 (27-79)||(13069958-13070009)
chr4 (27-79)||(42862532-42862584)
chr4 (36-79)||(8108982-8109025)
chr4 (29-76)||(40812056-40812103)
chr4 (28-79)||(43771144-43771195)
chr4 (39-125)||(47237767-47237853)
chr4 (27-79)||(30867043-30867095)
chr4 (36-75)||(722183-722222)
chr4 (36-79)||(20454566-20454609)
chr4 (36-79)||(50164421-50164464)
chr4 (36-79)||(50571890-50571933)
chr4 (27-77)||(2187926-2187976)
chr4 (28-78)||(22592322-22592372)
chr4 (37-79)||(34129511-34129553)
chr4 (17-79)||(39016670-39016732)
chr4 (48-125)||(2088700-2088777)
chr4 (43-76)||(29699522-29699555)
chr4 (27-79)||(16178601-16178652)
chr4 (27-79)||(21776956-21777008)
chr4 (17-125)||(24938420-24938527)
chr4 (17-79)||(37315570-37315629)
chr4 (46-118)||(40812112-40812184)
chr4 (36-76)||(40991703-40991743)
chr4 (19-79)||(44832472-44832532)
chr4 (17-64)||(20454666-20454713)
chr4 (39-98)||(49738950-49739009)
chr4 (29-79)||(2088776-2088826)
chr4 (39-125)||(41278644-41278730)
chr4 (36-78)||(47009215-47009257)
chr4 (40-73)||(20225458-20225491)
chr4 (17-125)||(5545646-5545754)
chr4 (31-79)||(48339451-48339499)
chr4 (28-64)||(50879474-50879510)
[»] chr5 (35 HSPs)
chr5 (214-427)||(31148279-31148493)
chr5 (17-125)||(42224595-42224703)
chr5 (40-125)||(24915123-24915208)
chr5 (17-125)||(17568706-17568814)
chr5 (40-125)||(24990954-24991039)
chr5 (20-112)||(34818267-34818359)
chr5 (27-125)||(4959346-4959444)
chr5 (40-121)||(13456192-13456273)
chr5 (17-125)||(26072171-26072279)
chr5 (17-125)||(8912578-8912688)
chr5 (17-79)||(42224702-42224764)
chr5 (17-125)||(6263951-6264057)
chr5 (17-125)||(32050375-32050483)
chr5 (17-125)||(40971457-40971565)
chr5 (27-79)||(40971564-40971616)
chr5 (17-79)||(4959285-4959347)
chr5 (17-79)||(30325985-30326047)
chr5 (36-79)||(27592563-27592606)
chr5 (344-387)||(36219754-36219797)
chr5 (26-76)||(17568816-17568866)
chr5 (27-76)||(6263900-6263949)
chr5 (40-79)||(10142087-10142126)
chr5 (36-79)||(17537213-17537256)
chr5 (248-310)||(4301939-4302001)
chr5 (49-79)||(5413848-5413878)
chr5 (48-122)||(27726833-27726907)
chr5 (37-75)||(28490837-28490875)
chr5 (25-79)||(31542354-31542408)
chr5 (27-79)||(13456276-13456326)
chr5 (27-79)||(1649567-1649619)
chr5 (34-79)||(14553520-14553567)
chr5 (27-79)||(26072120-26072172)
chr5 (43-79)||(28155811-28155847)
chr5 (39-122)||(31542268-31542352)
chr5 (39-79)||(32309509-32309549)
[»] chr3 (46 HSPs)
chr3 (257-396)||(5353544-5353683)
chr3 (248-398)||(32994959-32995109)
chr3 (17-125)||(24748914-24749022)
chr3 (17-125)||(37600134-37600242)
chr3 (27-125)||(10769739-10769837)
chr3 (17-125)||(54140897-54141005)
chr3 (17-107)||(29775146-29775234)
chr3 (17-106)||(38928013-38928102)
chr3 (57-125)||(46237090-46237158)
chr3 (17-79)||(46237157-46237219)
chr3 (17-124)||(27243114-27243221)
chr3 (40-118)||(357835-357913)
chr3 (36-125)||(44844049-44844138)
chr3 (27-79)||(37600241-37600293)
chr3 (27-79)||(54141004-54141056)
chr3 (36-79)||(28529279-28529322)
chr3 (17-77)||(27243052-27243112)
chr3 (36-79)||(26310557-26310600)
chr3 (36-125)||(13809149-13809238)
chr3 (30-79)||(43657107-43657156)
chr3 (55-124)||(50661564-50661633)
chr3 (40-76)||(46160977-46161013)
chr3 (40-79)||(138793-138832)
chr3 (36-79)||(20493556-20493599)
chr3 (36-79)||(20791322-20791365)
chr3 (28-79)||(41707550-41707601)
chr3 (248-319)||(44064223-44064294)
chr3 (17-79)||(10769836-10769898)
chr3 (17-75)||(52951475-52951533)
chr3 (36-76)||(14236045-14236085)
chr3 (27-79)||(21232633-21232685)
chr3 (36-79)||(5452171-5452214)
chr3 (36-79)||(37776814-37776857)
chr3 (36-79)||(45515606-45515649)
chr3 (40-79)||(46450095-46450134)
chr3 (41-75)||(24734736-24734770)
chr3 (17-79)||(38928120-38928182)
chr3 (41-75)||(41452010-41452044)
chr3 (36-118)||(42780696-42780778)
chr3 (36-81)||(39185263-39185308)
chr3 (338-383)||(45806906-45806951)
chr3 (36-72)||(13639428-13639464)
chr3 (17-125)||(24734773-24734880)
chr3 (17-125)||(41451900-41452007)
chr3 (57-125)||(43657040-43657108)
chr3 (17-77)||(50661635-50661695)
[»] chr1 (54 HSPs)
chr1 (17-125)||(11135807-11135915)
chr1 (17-125)||(11430509-11430616)
chr1 (17-125)||(32848587-32848695)
chr1 (17-107)||(41095613-41095703)
chr1 (17-125)||(14094005-14094113)
chr1 (27-125)||(50773125-50773223)
chr1 (46-125)||(41918063-41918142)
chr1 (17-79)||(11135746-11135808)
chr1 (17-107)||(13388341-13388431)
chr1 (19-77)||(28109877-28109935)
chr1 (17-79)||(41095720-41095782)
chr1 (17-79)||(41918002-41918064)
chr1 (27-79)||(11430458-11430510)
chr1 (21-79)||(14094112-14094170)
chr1 (27-124)||(28109937-28110033)
chr1 (27-112)||(43832350-43832435)
chr1 (41-121)||(24436495-24436575)
chr1 (27-79)||(32848694-32848746)
chr1 (17-120)||(50424870-50424973)
chr1 (17-79)||(19101712-19101774)
chr1 (17-79)||(22540375-22540437)
chr1 (17-118)||(29418556-29418658)
chr1 (25-75)||(50308772-50308822)
chr1 (27-79)||(9165319-9165371)
chr1 (19-79)||(15523219-15523279)
chr1 (19-79)||(15531213-15531273)
chr1 (40-79)||(2225254-2225293)
chr1 (36-79)||(32211895-32211938)
chr1 (17-79)||(21466682-21466744)
chr1 (17-79)||(44739125-44739187)
chr1 (40-81)||(4578686-4578727)
chr1 (39-76)||(6133738-6133775)
chr1 (38-79)||(28218159-28218200)
chr1 (17-125)||(13114674-13114782)
chr1 (29-125)||(30678928-30679023)
chr1 (36-79)||(26980373-26980416)
chr1 (36-75)||(39039470-39039509)
chr1 (40-79)||(41958113-41958152)
chr1 (37-76)||(50424980-50425019)
chr1 (27-124)||(15660962-15661057)
chr1 (17-79)||(43851146-43851208)
chr1 (38-76)||(50773225-50773263)
chr1 (48-93)||(8665251-8665296)
chr1 (27-76)||(13114784-13114833)
chr1 (46-79)||(13388450-13388483)
chr1 (29-78)||(37553061-37553110)
chr1 (28-76)||(46335112-46335163)
chr1 (17-125)||(8899082-8899189)
chr1 (27-79)||(18157055-18157107)
chr1 (36-72)||(24886063-24886099)
chr1 (36-76)||(25543366-25543406)
chr1 (27-71)||(28274803-28274847)
chr1 (42-78)||(35336896-35336932)
chr1 (248-324)||(51606948-51607024)
[»] chr7 (54 HSPs)
chr7 (17-125)||(13919848-13919956)
chr7 (17-125)||(26703444-26703552)
chr7 (17-125)||(25428483-25428591)
chr7 (17-125)||(14759711-14759819)
chr7 (29-117)||(19840901-19840989)
chr7 (17-125)||(45909524-45909632)
chr7 (322-394)||(9045151-9045223)
chr7 (17-92)||(37549631-37549706)
chr7 (47-125)||(17354561-17354639)
chr7 (27-79)||(26703551-26703603)
chr7 (17-125)||(27888350-27888457)
chr7 (36-79)||(22189965-22190008)
chr7 (17-79)||(13919787-13919849)
chr7 (29-79)||(17354638-17354688)
chr7 (17-79)||(22786158-22786220)
chr7 (36-118)||(26459068-26459150)
chr7 (38-79)||(11824099-11824140)
chr7 (48-125)||(19494374-19494451)
chr7 (55-120)||(21963172-21963237)
chr7 (27-124)||(26189972-26190069)
chr7 (17-125)||(24539127-24539235)
chr7 (27-79)||(31959968-31960020)
chr7 (36-79)||(7775026-7775069)
chr7 (28-79)||(33008122-33008173)
chr7 (36-79)||(44511047-44511090)
chr7 (40-125)||(22786219-22786304)
chr7 (19-79)||(45909464-45909525)
chr7 (17-125)||(17749762-17749870)
chr7 (27-79)||(19494450-19494502)
chr7 (307-387)||(43469671-43469750)
chr7 (36-79)||(19422945-19422988)
chr7 (40-79)||(31874061-31874100)
chr7 (36-79)||(32212980-32213023)
chr7 (26-76)||(14759659-14759709)
chr7 (17-79)||(25428590-25428652)
chr7 (27-76)||(24539237-24539286)
chr7 (28-79)||(32205097-32205145)
chr7 (248-312)||(14629853-14629916)
chr7 (36-76)||(17749720-17749760)
chr7 (39-75)||(31502579-31502615)
chr7 (44-79)||(8073399-8073434)
chr7 (36-79)||(14795157-14795200)
chr7 (36-79)||(15242149-15242192)
chr7 (28-79)||(27888300-27888351)
chr7 (36-75)||(27949299-27949338)
chr7 (40-79)||(46517321-46517360)
chr7 (45-79)||(41508386-41508420)
chr7 (17-78)||(23934021-23934082)
chr7 (36-125)||(49139943-49140032)
chr7 (27-75)||(2520650-2520698)
chr7 (51-79)||(11692220-11692248)
chr7 (256-324)||(41531557-41531625)
chr7 (36-72)||(43930078-43930114)
chr7 (34-78)||(47822003-47822047)
[»] scaffold0099 (1 HSPs)
scaffold0099 (40-125)||(27381-27468)
[»] scaffold0543 (1 HSPs)
scaffold0543 (36-79)||(9690-9733)
[»] scaffold0492 (1 HSPs)
scaffold0492 (36-79)||(11236-11279)
[»] scaffold0237 (1 HSPs)
scaffold0237 (302-405)||(3585-3686)
[»] scaffold0838 (1 HSPs)
scaffold0838 (39-79)||(2251-2291)
[»] scaffold0832 (1 HSPs)
scaffold0832 (39-79)||(2282-2322)
[»] scaffold0018 (1 HSPs)
scaffold0018 (27-125)||(27880-27977)
[»] scaffold0005 (1 HSPs)
scaffold0005 (27-71)||(296853-296897)


Alignment Details
Target: chr2 (Bit Score: 326; Significance: 0; HSPs: 43)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 326; E-Value: 0
Query Start/End: Original strand, 17 - 379
Target Start/End: Original strand, 37719841 - 37720203
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  37719841 agcaacattctcttttgagcactctttctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaatccacttaaaatgg 37719940  T
Q  117 tgggacatagtggactctttgttcaatgtatattttaactttaacttgaattgaacggtgttgtaaagagaagagttttggtttatgatcctttgagggt 216  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37719941 tgggacatagtggactctttgttcaatgtatattttaactttaacttgaattgaacggtgttgtaaagagaagagttttggtttatgatcctttgagggt 37720040  T
Q  217 gccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttatta 316  Q
    ||||||||||||||||||||||||       |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||    
T  37720041 gccgtttaatttgggaaagcaaactttttttccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattcatta 37720140  T
Q  317 cctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataa 379  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  37720141 cctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataa 37720203  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 351 - 457
Target Start/End: Original strand, 24727930 - 24728036
Alignment:
Q  351 aattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttggcaataatttttgggcctgttactaatgtttgggatca 450  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||    
T  24727930 aattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttggcaataatttttgggcatgttactaatgtttgggatca 24728029  T
Q  451 tacatat 457  Q
    |||||||    
T  24728030 tacatat 24728036  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 28898041 - 28898149
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||  |||||||| |||||| ||||||| |||| |||    
T  28898041 agcaacactctcttttgagtactctctttagcactcactcttttattggatgaaatcaatgtaggatctacactttggaaatgaaacccacataaagtgg 28898140  T
Q  117 tgggacata 125  Q
    |||||||||    
T  28898141 tgggacata 28898149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 1110362 - 1110266
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||||| |||| || ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||| |||| ||||||||||||    
T  1110362 ttttgagcactctttctaacattcactcttttattgggtgaaatcaatgtaggacatatactttggaaatggaacccacataaagtggtgggacata 1110266  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 63; E-Value: 3e-27
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 42183055 - 42182957
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||| |||||||||  ||||| ||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||| ||||||||||||    
T  42183055 tcttttgaacactctctccggcactaactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtggtgggacata 42182957  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 37228665 - 37228567
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||||||| ||||||||||||| ||||||||| ||||||||||||||||| | ||||||  ||| ||||||||| |||| ||||||||||||    
T  37228665 tcttttgagcactctttctagcactcacttttttattgggtgaaatcaatgtaggacctgcactttgaaaacggaacccacataaagtggtgggacata 37228567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 15509090 - 15508982
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||| |||||||||| || |||| ||||||| ||||| ||||||||||||||||  |||||||| ||||||||||||||  |||||||    
T  15509090 agcaacactctctttttagcactctctatatcacttactctttaattgggtgaaatcaatgtaggatctacactttggaaatggaacccacaaaaaatgg 15508991  T
Q  117 tgggacata 125  Q
    |||||||||    
T  15508990 tgggacata 15508982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 4964687 - 4964785
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||  ||||||||||||||||||||||||||||||| | ||||||||||||| ||||||||  ||||| || |||| |||| ||||||||||||    
T  4964687 tcttttgaatactctctctagcactcactcttttattggataagatcaatgtaggacctacactttgaaaatgaaatccacataaagtggtgggacata 4964785  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 214 - 313
Target Start/End: Original strand, 24727821 - 24727920
Alignment:
Q  214 ggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattta 313  Q
    |||||| ||||||||||||||||| ||       ||||||||| |||||||||||||| |||||||||||||| |||| ||||||||||||||| |||||    
T  24727821 ggtgccatttaatttgggaaagcacacttttttcccatcatggaaaagttaaaccaaggccatagatttaatactttaaaatttggatggctcaaattta 24727920  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 42182896 - 42182958
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  42182896 agcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 42182958  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 36 - 125
Target Start/End: Original strand, 31395468 - 31395557
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||||||||| ||||||||||| |||||| |||||||||| |||||| | ||||||||| |||| |||| ||| ||||||||    
T  31395468 cactctctctagcactcaatcttttattgggtgaaataaatgtaggacctacactatggaaatggaatccacataaagtggagggacata 31395557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 27968925 - 27969000
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 92  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||    
T  27968925 agcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaattagtgtaggacctacacttt 27969000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 28091662 - 28091587
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 92  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||    
T  28091662 agcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaattagtgtaggacctacacttt 28091587  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Complemental strand, 28101894 - 28101819
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 92  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||| |||||| | |||||||| ||||||||    
T  28101894 agcaacactctcttttgagtactctctctagcactcactcttttattgggtgaaattagtgtaggacctacacttt 28101819  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 1107045 - 1107107
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  1107045 agcaacactctcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 1107107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 4964846 - 4964784
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| ||||||||| ||||||||||||||||||| ||||||||| |||||||||||||    
T  4964846 agcaacattctcttttgagtactctctctagcactcacttttttattgggtgaaatcaatgta 4964784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 37 - 119
Target Start/End: Original strand, 24895291 - 24895373
Alignment:
Q  37 actctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgg 119  Q
    |||||||||| |||||||||||| ||||| | |||||||||| || |||||||||| |||||||||| ||| |||||||||||    
T  24895291 actctctctaacactcactctttcattgggttaaatcaatgtgggtcatacactttggaaatggaactcacataaaatggtgg 24895373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 28898198 - 28898148
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||||||    
T  28898198 ttttgagcactctctctagcactcactcttttattgggtgaaatcaatgta 28898148  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 45554593 - 45554636
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  45554593 cactctctctagcactcactcttttattggatgaaatcaatgta 45554636  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 6980293 - 6980235
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 75  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||||||||||||||    
T  6980293 agcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatcaa 6980235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 31395618 - 31395556
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||||||||||| |||||||||||| |||||||| |||||||||||||    
T  31395618 agcaacactctcttttgagcactctctttagcactcactcctttattgggtgaaatcaatgta 31395556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 71
Target Start/End: Original strand, 37228505 - 37228559
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaa 71  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||||    
T  37228505 agcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaa 37228559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 20951613 - 20951686
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 92  Q
    ||||||| | |||||||||||||||  |||||||| | ||||||||||| ||||||||||||||||| ||||||||    
T  20951613 agcaacactctcttttgagcactct--ctagcacttattcttttattgggtgaaatcaatgtaggacctacacttt 20951686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 11539442 - 11539489
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||| |||||| ||||||||||||||||||||||||||||||||||    
T  11539442 ttttgaacactctttctagcactcactcttttattggatgaaatcaat 11539489  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 33746953 - 33747032
Alignment:
Q  46 agcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||| ||||||||||||||| |||||| | || || ||||||||||||||||| |  |||| ||||||||||||    
T  33746953 agcactcacttttttattggatgaaaacaatgtggaacctatactttagaaatggaaccaatataaagtggtgggacata 33747032  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 92
Target Start/End: Original strand, 37398830 - 37398893
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 92  Q
    ||||||||| |||||||| |||| ||| ||||||||||||||||| ||||||||| ||||||||    
T  37398830 ttttgagcattctctctaacacttacttttttattggatgaaatccatgtaggacctacacttt 37398893  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 6315824 - 6315726
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||||||| | ||  | ||||||||||||||||  |||| |||||||||| |||||||| ||||||||||| |  |||| |||||| |||||    
T  6315824 tcttttgagcactctttttaatattcactcttttattggaaaaaattaatgtaggacctacactttggaaatggaacctatataaagtggtggaacata 6315726  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #28
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 40 - 122
Target Start/End: Complemental strand, 21447257 - 21447175
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggac 122  Q
    ||||||| ||| |||||||||||||  |||||||||||| || | |||||||| |||||||  ||||| ||||||||||||||    
T  21447257 ctctctaacacccactcttttattgtgtgaaatcaatgtgggtcttacactttggaaatgggtcccacataaaatggtgggac 21447175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #29
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 9470109 - 9470150
Alignment:
Q  38 ctctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| ||||||||||||||||||||||||||||||||    
T  9470109 ctctctctaacactcactcttttattggatgaaatcaatgta 9470150  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 1110205 - 1110267
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||| ||||| |||||||| |||||||||||||||||  |||||||||||||    
T  1110205 agcaacactctctttcgagcattctctctaacactcactcttttattgagtgaaatcaatgta 1110267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 15508921 - 15508983
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||| |||||| |||| |||||||||||||||||  |||||||||||||    
T  15508921 agcaacactctcttttgaacactctttctaacactcactcttttattgagtgaaatcaatgta 15508983  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 37 - 78
Target Start/End: Original strand, 17188092 - 17188133
Alignment:
Q  37 actctctctagcactcactcttttattggatgaaatcaatgt 78  Q
    |||||||||| |||||||| ||||||||||||||||||||||    
T  17188092 actctctctatcactcactattttattggatgaaatcaatgt 17188133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 19 - 76
Target Start/End: Complemental strand, 40535161 - 40535104
Alignment:
Q  19 caacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    ||||| ||||||| |||||| ||||||| |||||||||||||||||| | ||||||||    
T  40535161 caacactatctttcgagcaccctctctaacactcactcttttattgggtaaaatcaat 40535104  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #34
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 30 - 79
Target Start/End: Original strand, 44274254 - 44274303
Alignment:
Q  30 tttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||| || ||||||||| ||||||| |||||||||||    
T  44274254 tttgagcactctctctaacattcactctttcattggataaaatcaatgta 44274303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Complemental strand, 26767912 - 26767872
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||| ||||||||| |||||||||||||||||    
T  26767912 tctctctagcacttactcttttactggatgaaatcaatgta 26767872  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 42579811 - 42579771
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaat 76  Q
    ||||||||| | |||||||||||||||||||||||||||||    
T  42579811 cactctctcaaacactcactcttttattggatgaaatcaat 42579771  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 3804610 - 3804653
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||| || || |||||||||||||||||||||||||||||    
T  3804610 cactctctttaacattcactcttttattggatgaaatcaatgta 3804653  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 26 - 65
Target Start/End: Original strand, 10339782 - 10339821
Alignment:
Q  26 atcttttgagcactctctctagcactcactcttttattgg 65  Q
    ||||||||| |||||||||||||||||||| |||||||||    
T  10339782 atcttttgaacactctctctagcactcactattttattgg 10339821  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 18511363 - 18511320
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| ||| |||||||||||||||||||| |||||||||||    
T  18511363 cactctcactatcactcactcttttattggataaaatcaatgta 18511320  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #40
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 38 - 125
Target Start/End: Complemental strand, 38104403 - 38104316
Alignment:
Q  38 ctctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||| |||||||||| | |||| || || ||||||| || |||||||||| | |||||||||||  |||| |||||| |||||    
T  38104403 ctctctctaacactcactctctcattgaattaattcaatgtgggtcatacactttgggaatggaacccaaataaagtggtggaacata 38104316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 40 - 78
Target Start/End: Complemental strand, 19427397 - 19427359
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgt 78  Q
    |||||||||||||||||| | ||||||||||||||||||    
T  19427397 ctctctagcactcactctatcattggatgaaatcaatgt 19427359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 73
Target Start/End: Complemental strand, 30718477 - 30718443
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatc 73  Q
    ||||||||| |||||||||||||||||||||||||    
T  30718477 tctctctagtactcactcttttattggatgaaatc 30718443  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 18 - 75
Target Start/End: Original strand, 8009521 - 8009578
Alignment:
Q  18 gcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 75  Q
    |||||| | |||||||| |||||| |||| |||||||| |||| ||||||||||||||    
T  8009521 gcaacactctcttttgaacactctttctaacactcacttttttgttggatgaaatcaa 8009578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8 (Bit Score: 176; Significance: 1e-94; HSPs: 37)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 176; E-Value: 1e-94
Query Start/End: Original strand, 250 - 457
Target Start/End: Original strand, 7423522 - 7423729
Alignment:
Q  250 atcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaa 349  Q
    ||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||| |||||||| |||||||||| |||||||||||||||||    
T  7423522 atcatgggaaagttaaaccaagaccatagatttaatactttttaatttggatggctcatattcattacctgttaactttttgatgggttatataaaacaa 7423621  T
Q  350 aaattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttggcaataatttttgggcctgttactaatgtttgggatc 449  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||    
T  7423622 aaattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttggcaataatttttgggcttgttagtaatgtttgggatc 7423721  T
Q  450 atacatat 457  Q
    ||||||||    
T  7423722 atacatat 7423729  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 139; E-Value: 1e-72
Query Start/End: Original strand, 253 - 443
Target Start/End: Complemental strand, 25877617 - 25877427
Alignment:
Q  253 atgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaaaaa 352  Q
    |||| |||||||||||||| |||||||||||||| ||| |||||||||||||||||||| |||||||| ||| |||||| ||||||||||||||||||||    
T  25877617 atggaaaagttaaaccaaggccatagatttaatactttttaatttggatggctcagattcattacctgttaattttttgatgggttatataaaacaaaaa 25877518  T
Q  353 ttgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttggcaataatttttgggcctgttactaatgttt 443  Q
    |||||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| | ||| ||||||||    
T  25877517 ttgtgaccccaccttataattaaataacattttcttttttgtatgtggtagtgggctttggcaataatttttgggcttattagtaatgttt 25877427  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 35689646 - 35689548
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||||||||||||||||||||| ||||||||| ||||| |||||| |||| ||||||||  ||||||||| ||| |||| ||||||||||||    
T  35689646 tcttttgagcactctctctagcactcacttttttattgggtgaaaacaatgtgggacttacactttgaaaatggaactcacataaagtggtgggacata 35689548  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 13407328 - 13407436
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| ||||||||||| |||||| ||| | ||||| | |||||||||| || ||||||||||  |||| |||||||||||||||||    
T  13407328 agcaacactctcttttgaacactctctctaacactcattctctcattgggttaaatcaatgtgggtcatacactttgaaaatagaacccacttaaaatgg 13407427  T
Q  117 tgggacata 125  Q
    |||||||||    
T  13407428 tgggacata 13407436  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 36 - 124
Target Start/End: Complemental strand, 33417839 - 33417751
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 124  Q
    |||||||||||||||||||||||||||||  |||||| |||||||||| |||||||| |||||| ||||||| |||| |||||| ||||    
T  33417839 cactctctctagcactcactcttttattgagtgaaattaatgtaggacctacactttggaaatgaaacccacataaagtggtggaacat 33417751  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 1205991 - 1205895
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||| |||||||| ||||||||||||||||||||  ||||||||||||| ||| |||||||| ||||| |||||||  |||| ||||| ||||||    
T  1205991 ttttgaacactctctttagcactcactcttttattgagtgaaatcaatgtaagacctacactttggaaatagaacccatataaagtggtgagacata 1205895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 35689497 - 35689549
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||| |||||||||||||||||||||||    
T  35689497 tcttttgagcactctctctagcactcacttttttattggatgaaatcaatgta 35689549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 28211930 - 28211998
Alignment:
Q  57 ttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||| ||||||||||||||||| || |||||| ||||||||||||| |||||||||| ||||||    
T  28211930 ttttattgggtgaaatcaatgtaggacctatactttaaaaatggaacccacataaaatggtgagacata 28211998  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 32072104 - 32072166
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||  ||||| | ||||||||||||||||||||||||||||||||||||| ||||||    
T  32072104 agcaacattcacttttcaacactctctctagcactcactcttttattggatgaaatgaatgta 32072166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 6387718 - 6387629
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||| |||||| ||| ||||||| | ||| |||||| || | || ||||| |||||||||||||| |||||||||||||||||    
T  6387718 cactctctctaacactcattctcttattgggttaaaacaatgtgggtcgtatactttggaaatggaacccacataaaatggtgggacata 6387629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 29 - 121
Target Start/End: Original strand, 7599438 - 7599530
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtggga 121  Q
    ||||||||| ||| |||| |||||||| ||||||||  | ||||||||||||||| |||||||| |||| ||||||||| |||| || |||||    
T  7599438 ttttgagcattctttctaacactcacttttttattgagtaaaatcaatgtaggacctacactttggaaaaggaacccacataaagtgctggga 7599530  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 34303442 - 34303550
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||||  |||||| ||||  |||||||||||| ||||||||||||| ||||||||||||| ||| ||||||||  |||| ||| |||| || | |||    
T  34303442 agcaacatcctcttttaagcatcctctctagcactaactcttttattgggtgaaatcaatgtaagacctacactttgaaaatcgaagccacatagagtgg 34303541  T
Q  117 tgggacata 125  Q
    || ||||||    
T  34303542 tgagacata 34303550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 34861337 - 34861298
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||||||||||||||    
T  34861337 ctctctagcactcactcttttattggatgaaatcaatgta 34861298  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 7599583 - 7599533
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||| |||||||||||||||  |||||||||||||||||||||||||||    
T  7599583 ttttgaacactctctctagcacctactcttttattggatgaaatcaatgta 7599533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 1977327 - 1977284
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||| | ||||||||||||||||||    
T  1977327 cactctctctagcactcactcttctgttggatgaaatcaatgta 1977284  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 13856549 - 13856506
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| ||| ||||||||||||||||||||||||||||    
T  13856549 cactctctctaacacccactcttttattggatgaaatcaatgta 13856506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 63
Target Start/End: Original strand, 1205834 - 1205880
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttatt 63  Q
    ||||||| | ||||||||||||||||| |||||||||||||||||||    
T  1205834 agcaacactctcttttgagcactctctttagcactcactcttttatt 1205880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 23685138 - 23685200
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||  ||||||  ||||||||  |||||||||| |||||||||||||||||||||||    
T  23685138 agcaacattcacttttgcacactctcttaagcactcactattttattggatgaaatcaatgta 23685200  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 77
Target Start/End: Complemental strand, 9952911 - 9952870
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatg 77  Q
    |||||||||||||||||| | |||||||||||||||||||||    
T  9952911 cactctctctagcactcatttttttattggatgaaatcaatg 9952870  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 12212129 - 12212230
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||| | || |||||||| || |||||||||| |||| |||||||||||| || | |||||||| |||||||  ||||| |||| |||    
T  12212129 agcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaatgtgggtcctacactttggaaatgggtcccacataaagtgg 12212228  T
Q  117 tg 118  Q
    ||    
T  12212229 tg 12212230  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 17 - 118
Target Start/End: Original strand, 12456557 - 12456658
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||| | || |||||||| || |||||||||| |||| |||||||||||| || | |||||||| |||||||  ||||| |||| |||    
T  12456557 agcaacactctcttttcaacattctctctaacattcactcttttcttgggtgaaatcaatgtgggtcctacactttggaaatgggtcccacataaagtgg 12456656  T
Q  117 tg 118  Q
    ||    
T  12456657 tg 12456658  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #22
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 44709297 - 44709342
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtagg 81  Q
    ||||||||||| |||||||||||||||||  |||||||||||||||    
T  44709297 cactctctctaacactcactcttttattgtgtgaaatcaatgtagg 44709342  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 17499387 - 17499347
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||||||||||||  ||||||||||||||||||||||    
T  17499387 cactctctctagcactctatcttttattggatgaaatcaat 17499347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 47 - 79
Target Start/End: Original strand, 31301152 - 31301184
Alignment:
Q  47 gcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||||||||||||    
T  31301152 gcactcactcttttattggatgaaatcaatgta 31301184  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 6387591 - 6387630
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| |||||||||||||||||||| |||||||||||    
T  6387591 ctctctaacactcactcttttattggataaaatcaatgta 6387630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 8914789 - 8914840
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| ||||||||| |||||||||||| ||||||| ||| |||||||    
T  8914789 cttttgagcgctctctctaacactcactctttcattggataaaaccaatgta 8914840  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 119
Target Start/End: Original strand, 23142822 - 23142921
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||||  |||| ||| | ||||||||| ||||| |||||| | || || ||||| |||||||||||||| |||| |||    
T  23142822 agcaacactctcttttgagcactctct--agcattcatt-ttttattgggtgaaaacaatgtggaacctagactttggaaatggaacccacataaagtgg 23142918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 29 - 76
Target Start/End: Complemental strand, 23142984 - 23142937
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||||||||||| |||||| ||| ||||||||| ||||||||||    
T  23142984 ttttgagcactctctcaagcacttacttttttattgggtgaaatcaat 23142937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 28414023 - 28413980
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||| |||||| ||||||| |||||||||||||||    
T  28414023 cactctctctagcgctcacttttttattcgatgaaatcaatgta 28413980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 45246460 - 45246503
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||| ||||||||||| ||||||||||| |||||||||||    
T  45246460 cactctctttagcactcactattttattggataaaatcaatgta 45246503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Complemental strand, 25915188 - 25915146
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgt 78  Q
    ||||||| |||| ||||||||||||||||| ||||||||||||    
T  25915188 cactctccctagtactcactcttttattgggtgaaatcaatgt 25915146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 79
Target Start/End: Original strand, 35797426 - 35797464
Alignment:
Q  41 tctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| ||||||||||||||||| |||||||||||    
T  35797426 tctctagcattcactcttttattggataaaatcaatgta 35797464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 16441830 - 16441875
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtagg 81  Q
    ||||||||||| |||||||||||||||||  ||||||| |||||||    
T  16441830 cactctctctaacactcactcttttattgagtgaaatctatgtagg 16441875  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 72 - 125
Target Start/End: Complemental strand, 43026412 - 43026359
Alignment:
Q  72 tcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||| |||||||| |||||||||||||| |||| |||  |||||||    
T  43026412 tcaatgtaggacctacactttggaaatggaacccacataaagtggcaggacata 43026359  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 77
Target Start/End: Complemental strand, 45218667 - 45218630
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatg 77  Q
    ||||||| ||||| ||||||||||||||||||||||||    
T  45218667 ctctctaacactcgctcttttattggatgaaatcaatg 45218630  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 15 - 79
Target Start/End: Complemental strand, 13407499 - 13407435
Alignment:
Q  15 tcagcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| | | |||||  ||||||||||| |||| ||| ||||||||||| |||||||||||    
T  13407499 tcagcaacactcttttttggacactctctctaacactaacttttttattggataaaatcaatgta 13407435  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #37
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 39023459 - 39023499
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||| |  ||||||||||||||||||||||    
T  39023459 tctctctagcactcatttatttattggatgaaatcaatgta 39023499  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 166; Significance: 1e-88; HSPs: 27)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 166; E-Value: 1e-88
Query Start/End: Original strand, 214 - 452
Target Start/End: Original strand, 279545 - 279783
Alignment:
Q  214 ggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattta 313  Q
    |||||| |||||||||||||| || ||       |||||| |||||||||||||||||||||||||||||||| ||| ||||||||||| |||||||| |    
T  279545 ggtgccatttaatttgggaaaacatactttttttccatcacgggaaagttaaaccaagaccatagatttaatactttttaatttggatgactcagattca 279644  T
Q  314 ttacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttgg 413  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  279645 ttacctgttaactttttgatgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttgg 279744  T
Q  414 caataatttttgggcctgttactaatgtttgggatcata 452  Q
    ||||||||||||||| ||||| ||||||||| |||||||    
T  279745 caataatttttgggcttgttagtaatgtttgagatcata 279783  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 19090219 - 19090327
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| |||||||||||||| |||| |||    
T  19090219 agcaacactctcttttgagcactctctctagcactcactcttttattggttgaattcaatgtaggacctacactttggaaatggaacccacataaagtgg 19090318  T
Q  117 tgggacata 125  Q
    |||||||||    
T  19090319 tgggacata 19090327  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 10061035 - 10060927
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||||||| |||||||| ||||||||| ||| ||||||||||||| ||||||||  ||||||||||||| |||| |||    
T  10061035 agcaacactctcttttgagcactctctctaacactcacttttttattgggtgagatcaatgtaggacctacactttgaaaatggaacccacataaagtgg 10060936  T
Q  117 tgggacata 125  Q
     ||||||||    
T  10060935 cgggacata 10060927  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 52; E-Value: 1e-20
Query Start/End: Original strand, 17 - 112
Target Start/End: Original strand, 19737439 - 19737534
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 112  Q
    ||||||| | |||||||| || |||||||| |||||||||||||||||| | ||||||||||||||| |||||||| |||||| ||||||| ||||    
T  19737439 agcaacactctcttttgaacattctctctatcactcactcttttattggctcaaatcaatgtaggacctacactttggaaatgaaacccacataaa 19737534  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 50; E-Value: 2e-19
Query Start/End: Original strand, 40 - 125
Target Start/End: Original strand, 35128750 - 35128835
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||| |||||| | ||||||||| ||||||||||||||||| ||||||||  ||||||||||||| |||| ||||||||||||    
T  35128750 ctctctaacactcatttttttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtggtgggacata 35128835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 19090378 - 19090326
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  19090378 tcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 19090326  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 6531471 - 6531409
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||| |||||||| |||||||||||||||||||| |||||||||||||    
T  6531471 agcaacactctcttttgaggactctctccagcactcactcttttattgggtgaaatcaatgta 6531409  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 39 - 97
Target Start/End: Original strand, 9940387 - 9940445
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaa 97  Q
    ||||||||||||||||||||||||||| ||||||||||||||||  |||||||| ||||    
T  9940387 tctctctagcactcactcttttattgggtgaaatcaatgtaggatttacactttggaaa 9940445  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 19737596 - 19737546
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||||| ||||| |||||||||||||    
T  19737596 ttttgagcactctctctagcactcactctttaattgggtgaaatcaatgta 19737546  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 373556 - 373467
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||| |||| ||| ||||||||||| ||||||||||||||| ||| ||||  |||||||| |||| |||| || |||||||||    
T  373556 cactctctctaacacttactattttattggataaaatcaatgtaggacctaccctttgaaaatggaatccacataaagtgctgggacata 373467  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 34905362 - 34905405
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| ||||||||||||||||||||||||||||||||    
T  34905362 cactctctctaacactcactcttttattggatgaaatcaatgta 34905405  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 35128896 - 35128834
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||| |||||||||||||| ||||||||||||||| | |||||||||||    
T  35128896 agcaacactctcttttgaacactctctctagcagtcactcttttattgggtaaaatcaatgta 35128834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 373408 - 373468
Alignment:
Q  19 caacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||||||||||||||||| |||| ||||||||| | |||||||||||    
T  373408 caacattcttttttgagcactctctctagcacccacttttttattgggtaaaatcaatgta 373468  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 21987301 - 21987361
Alignment:
Q  19 caacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  21987301 caacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 21987361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 445844 - 445887
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||| ||||||||||||||| |||||||||||||||||||||||    
T  445844 cactatctctagcactcacttttttattggatgaaatcaatgta 445887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 4595768 - 4595811
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||||||||  |||||||||||||    
T  4595768 cactctctctagcactcactcttttattgagtgaaatcaatgta 4595811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 46 - 125
Target Start/End: Original strand, 6992304 - 6992383
Alignment:
Q  46 agcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||| ||||||||||  | ||||||||||||||| |||||||| |||||| ||| ||| |||| ||||| ||||||    
T  6992304 agcactcattcttttattgagtaaaatcaatgtaggacctacactttggaaatgaaactcacataaagtggtgagacata 6992383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 405
Target Start/End: Original strand, 29857383 - 29857484
Alignment:
Q  302 ggctcagatttattacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttcttttttgtatgtagt 401  Q
    |||| |||||| ||||||| ||||||||||   |||  ||| |||||||||||||||||||||||||| |||||||||| ||||||  ||||| || |||    
T  29857383 ggctgagatttgttacctgttaactttttgactggtc-tatcaaacaaaaattgtgaccccacctcat-attaaataaccttttctcatttgtttgaagt 29857480  T
Q  402 agtg 405  Q
    ||||    
T  29857481 agtg 29857484  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 31116286 - 31116235
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| ||||||||||| || |||||||| ||||||||||||||||||||    
T  31116286 cttttgaacactctctctaacattcactcttctattggatgaaatcaatgta 31116235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 40 - 106
Target Start/End: Complemental strand, 4595895 - 4595829
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 106  Q
    |||| |||||||||||||||| || | |||||| |||||||||| ||||||||  ||||||||||||    
T  4595895 ctctttagcactcactcttttctttggtgaaattaatgtaggacttacactttgaaaatggaaccca 4595829  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 49 - 121
Target Start/End: Original strand, 12794850 - 12794922
Alignment:
Q  49 actcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtggga 121  Q
    ||||| |||||||||||||||||| |||||||||| |||| |||  ||||| ||| ||| |||| ||||||||    
T  12794850 actcattcttttattggatgaaattaatgtaggacctacattttgaaaatgaaactcacataaagtggtggga 12794922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 12327359 - 12327316
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||| |||||||||||||||||  ||||||||||    
T  12327359 cactctctctagcagtcactcttttattggatagaatcaatgta 12327316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 27 - 74
Target Start/End: Complemental strand, 17226692 - 17226645
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatca 74  Q
    |||| ||| |||||||| ||||| ||||||||||||||||||||||||    
T  17226692 tcttctgaacactctctttagcattcactcttttattggatgaaatca 17226645  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 8441991 - 8441953
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatca 74  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  8441991 cactctctctaacactcactcatttattggatgaaatca 8441953  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 74
Target Start/End: Complemental strand, 8450795 - 8450757
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatca 74  Q
    ||||||||||| ||||||||| |||||||||||||||||    
T  8450795 cactctctctaacactcactcatttattggatgaaatca 8450757  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 49 - 78
Target Start/End: Complemental strand, 12488185 - 12488156
Alignment:
Q  49 actcactcttttattggatgaaatcaatgt 78  Q
    ||||||||||||||||||||||||||||||    
T  12488185 actcactcttttattggatgaaatcaatgt 12488156  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 10133312 - 10133276
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaat 72  Q
    ||||||||||| ||||||||| |||||||||||||||    
T  10133312 cactctctctaacactcactcatttattggatgaaat 10133276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 7e-87; HSPs: 49)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 7e-87
Query Start/End: Original strand, 214 - 457
Target Start/End: Complemental strand, 42545611 - 42545368
Alignment:
Q  214 ggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattta 313  Q
    |||||| ||||||||||||||| | ||       ||||||| ||||||||||||||||  ||||||||||||| ||| |||||||||||||||||||| |    
T  42545611 ggtgccatttaatttgggaaagtacacttttttcccatcataggaaagttaaaccaaggtcatagatttaatactttttaatttggatggctcagattca 42545512  T
Q  314 ttacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttgg 413  Q
    ||||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  42545511 ttacctgttaactttttgatgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttgg 42545412  T
Q  414 caataatttttgggcctgttactaatgtttgggatcatacatat 457  Q
    |||||||||||| || ||||| |||| |||||||||||||||||    
T  42545411 caataatttttgagcttgttagtaatatttgggatcatacatat 42545368  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 79; E-Value: 1e-36
Query Start/End: Original strand, 216 - 355
Target Start/End: Original strand, 36513999 - 36514138
Alignment:
Q  216 tgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttatt 315  Q
    |||||||||||||||||||||||||       |||||||   |||||||||||||  |||||||||||||| |||| |||||| |||| |||||||||||    
T  36513999 tgccgtttaatttgggaaagcaaacttttttcccatcataaaaaagttaaaccaaagccatagatttaatactttaaaatttgaatggttcagatttatt 36514098  T
Q  316 acctgctaactttttgttgggttatataaaacaaaaattg 355  Q
    ||||| ||||||||||||||||||||||||||||||||||    
T  36514099 acctgttaactttttgttgggttatataaaacaaaaattg 36514138  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 76; E-Value: 6e-35
Query Start/End: Original strand, 253 - 428
Target Start/End: Complemental strand, 25891991 - 25891816
Alignment:
Q  253 atgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaaaaa 352  Q
    |||||||||||||| || | | || ||| ||||| ||| |||||||| || ||||||| | | ||||| |||||||||| ||||||||||||||||||||    
T  25891991 atgggaaagttaaagcatggcaattgatataatactttttaatttgggtgactcagatgtgtgacctgttaactttttgatgggttatataaaacaaaaa 25891892  T
Q  353 ttgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttggcaataatttttgggc 428  Q
     |||||||||||||| ||||||||||||  ||| | |||||| | |||||||||||||| ||||| ||||||||||    
T  25891891 ctgtgaccccacctcgtaattaaataaccatttatcttttgtttctagtagtgggcttttgcaattatttttgggc 25891816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 248 - 426
Target Start/End: Complemental strand, 54117182 - 54117004
Alignment:
Q  248 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaac 347  Q
    |||| |||||||||||||| || || ||| ||| ||||| ||| ||||||||| |||| |||| | | ||||| |||||||||| |||||||||||||||    
T  54117182 ccatgatgggaaagttaaagcatgatcattgatataatactttttaatttggacggctgagatgtgtgacctgttaactttttgatgggttatataaaac 54117083  T
Q  348 aaaaattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttggcaataatttttgg 426  Q
    |||||  ||||||||||||||||||||||||||  ||| | |||||| | || ||||||||||| ||||| ||||||||    
T  54117082 aaaaacagtgaccccacctcataattaaataaccatttatcttttgtttctactagtgggcttttgcaattatttttgg 54117004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 340 - 458
Target Start/End: Original strand, 54713243 - 54713361
Alignment:
Q  340 tataaaacaaaaattgtgaccccacctcataattaaataacattttcttttttgtatgtagtagtgggctttggcaataatttttgggcctgttactaat 439  Q
    ||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||| || |||||||||||||| | ||||  ||||    
T  54713243 tataaaacaaaaattgtgaccccacatcataattaaataacattttctgttttgtatgcagtagtgggcctttgcaataatttttggacttgttgataat 54713342  T
Q  440 gtttgggatcatacatatg 458  Q
    |||| ||||||||| ||||    
T  54713343 gtttcggatcatacgtatg 54713361  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 44832639 - 44832531
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||||| |||||||| | ||||||||| ||||||||||||||||| | |||||| ||||||||| |||| ||||||||    
T  44832639 agcaacactctcttttgagcactctctccagcactcatttttttattgggtgaaatcaatgtaggacctgcactttggaaatggaatccacataaaatgg 44832540  T
Q  117 tgggacata 125  Q
    |||||||||    
T  44832539 tgggacata 44832531  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 16178740 - 16178651
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||| | ||||||||||||||||||||||||||||||| || |||||||| |||||||||||||| |||| ||||||||||||    
T  16178740 cactctctctaactctcactcttttattggatgaaatcaatgtagaacctacactttggaaatggaacccacataaagtggtgggacata 16178651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 51206219 - 51206111
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||| |||  ||||| ||| ||| |||| ||     
T  51206219 agcaacactctcttttgagcactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacattttgaaaatgaaactcacataaagtga 51206120  T
Q  117 tgggacata 125  Q
    |||||||||    
T  51206119 tgggacata 51206111  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 39016839 - 39016731
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| |||||||||||||||| ||||||||||| | | ||||||||||||    |||||||| |||||||||||||| ||||||||    
T  39016839 agcaacactctcttttgaacactctctctagcacttactcttttattaggtaaaatcaatgtagatactacactttggaaatggaacccacgtaaaatgg 39016740  T
Q  117 tgggacata 125  Q
    |||||||||    
T  39016739 tgggacata 39016731  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 13070116 - 13070008
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| || | |||||| |||||||||||||||||  | ||||||||||||||| ||||||||  ||||||||||||| |||| |||    
T  13070116 agcaacactctcttttgaacattttctctaacactcactcttttattgagtaaaatcaatgtaggacctacactttgaaaatggaacccacataaagtgg 13070017  T
Q  117 tgggacata 125  Q
    ||| |||||    
T  13070016 tggaacata 13070008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 42862425 - 42862533
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||||| | ||||||||||||||||||||||| |||||||||| || |    |||||||  ||||||||||||| |||| |||    
T  42862425 agcaacactctcttttgagcactatatctagcactcactcttttattgggtgaaatcaatttatgtttcacactttgaaaatggaacccacataaagtgg 42862524  T
Q  117 tgggacata 125  Q
    |||||||||    
T  42862525 tgggacata 42862533  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 29 - 125
Target Start/End: Complemental strand, 37315724 - 37315628
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||||||  ||||||||||||||||||||| |||||||||||||| || ||| ||||  ||||| |||  || |||| ||||||||||||    
T  37315724 ttttgagcactctcattagcactcactcttttattgggtgaaatcaatgtagaacctacgctttgaaaatgaaacttacataaagtggtgggacata 37315628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 274 - 341
Target Start/End: Original strand, 54713027 - 54713094
Alignment:
Q  274 catagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttata 341  Q
    |||||||||||||  ||||||||||||||| |||||||||||| ||| |||||||||||||| |||||    
T  54713027 catagatttaatacattataatttggatggttcagatttattatctgttaactttttgttggattata 54713094  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 30866946 - 30867044
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||| | |||||||||||||||||| | ||||||| | ||||| |||||| |||  ||||||||  ||||||||||||| |||| ||||||||||||    
T  30866946 tcttttaaacactctctctagcactcatttttttattaggtgaaaacaatgtgggatctacactttgaaaatggaacccacataaagtggtgggacata 30867044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 47237904 - 47237855
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||| |||||||||||||| ||||||||||||||||||||||||||    
T  47237904 tcttttgaacactctctctagcattcactcttttattggatgaaatcaat 47237855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 28 - 124
Target Start/End: Original strand, 2187829 - 2187924
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 124  Q
    ||||||||||||||||||| |||||| | ||||||||  ||||| |||||| |||| |||||||| ||||  |||||||| |||| |||||||||||    
T  2187829 cttttgagcactctctctaacactcatttttttattgtgtgaaaacaatgtgggacctacacttt-gaaaatgaacccacataaagtggtgggacat 2187924  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 13069958 - 13070009
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  13069958 tcttttgagcacactctctagcactcactcttttattgg-tgaaatcaatgta 13070009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 42862584 - 42862532
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||| ||||||||||||||| ||||||||| |||||||||||||    
T  42862584 tcttttgagcactttctctagcactcacttttttattgggtgaaatcaatgta 42862532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 8108982 - 8109025
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||||||||| |||||||||||||    
T  8108982 cactctctctagcactcactcttttattgggtgaaatcaatgta 8109025  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 29 - 76
Target Start/End: Original strand, 40812056 - 40812103
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||| |||||||||||||||||||||||||||||| ||||||||||    
T  40812056 ttttgaacactctctctagcactcactcttttattgggtgaaatcaat 40812103  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 43771144 - 43771195
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| |||||||||||  |||||||||||||||||||||||||||||||    
T  43771144 cttttgaacactctctctatgactcactcttttattggatgaaatcaatgta 43771195  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 47237767 - 47237853
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||||||||||||||||||||||||||  |||||| || ||||||||  ||||| |||  |  |||| ||||||||||||    
T  47237767 tctctctagcactcactcttttattggatgaaattcatgtagaacctacactttgaaaatgaaacttatataaagtggtgggacata 47237853  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 30867095 - 30867043
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||| ||||||||||||||| ||||||||||| |||| ||||||    
T  30867095 tcttttgagcactatctctagcactcacttttttattggattaaattaatgta 30867043  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 722183 - 722222
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaa 75  Q
    |||||||||||||||||||| |||||||||||||||||||    
T  722183 cactctctctagcactcacttttttattggatgaaatcaa 722222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 20454566 - 20454609
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||||||| ||| |||||||||||    
T  20454566 cactctctctagcactcactcttttattagataaaatcaatgta 20454609  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 50164421 - 50164464
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||| |||||||||| |||||||||||    
T  50164421 cactctctctagcactcactcatttattggataaaatcaatgta 50164464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 50571890 - 50571933
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||| ||||||||||| |||||||||||||||    
T  50571890 cactctctctagcacttactcttttattagatgaaatcaatgta 50571933  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 27 - 77
Target Start/End: Complemental strand, 2187976 - 2187926
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 77  Q
    ||||||||||||||||||||||  || |||||||||||| |||||||||||    
T  2187976 tcttttgagcactctctctagctttcgctcttttattgggtgaaatcaatg 2187926  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 28 - 78
Target Start/End: Original strand, 22592322 - 22592372
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 78  Q
    ||||||| || ||||||| |||||||||||||||||||||||||| |||||    
T  22592322 cttttgaacattctctctggcactcactcttttattggatgaaataaatgt 22592372  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 37 - 79
Target Start/End: Complemental strand, 34129553 - 34129511
Alignment:
Q  37 actctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||| |||||||||| |||||||||    
T  34129553 actctctctagcactcactcttctattggatgagatcaatgta 34129511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #31
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 39016670 - 39016732
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| |||||| | |||||||| || |||| ||| |||||||||||||||||||||||    
T  39016670 agcaacattctcttttaaacactctctataacacttactattttattggatgaaatcaatgta 39016732  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 2088700 - 2088777
Alignment:
Q  48 cactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||||||| | | |||| |||| ||||  |||||||| ||||||||| |||| |||| ||||||||||||    
T  2088700 cactcactcttttattagcttaaattaatgcaggatctacactttggaaatggaatccacataaagtggtgggacata 2088777  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 43 - 76
Target Start/End: Original strand, 29699522 - 29699555
Alignment:
Q  43 tctagcactcactcttttattggatgaaatcaat 76  Q
    ||||||||||||||||||||||||||||||||||    
T  29699522 tctagcactcactcttttattggatgaaatcaat 29699555  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 16178601 - 16178652
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| |||||||||||||||||||||| |||||||  |||||||||||||    
T  16178601 tcttttgtgcactctctctagcactcactc-tttattgagtgaaatcaatgta 16178652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 21777008 - 21776956
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||  ||||||||||| || ||||||||||||||||| |||||||||||    
T  21777008 tcttttggacactctctctaacattcactcttttattggataaaatcaatgta 21776956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #36
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 24938420 - 24938527
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    |||||||||||||||| | |||| ||||||  ||| ||||| ||||||| | |||||| |||||| | ||||||||| |||| ||| |||   |||||||    
T  24938420 agcaacattatcttttcaacactttctctaatacttactctcttattggtttaaatcattgtaggtc-tacactttaaaaattgaatccaaacaaaatgg 24938518  T
Q  117 tgggacata 125  Q
    |||||||||    
T  24938519 tgggacata 24938527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #37
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 37315570 - 37315629
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||||||||||||||| |||||||||||   |||| |||||||||||||    
T  37315570 agcaacactctcttttgagcactctctctaacactcactctt---ttgggtgaaatcaatgta 37315629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 46 - 118
Target Start/End: Complemental strand, 40812184 - 40812112
Alignment:
Q  46 agcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtg 118  Q
    |||| ||||| ||||||||||| |||| |||||| ||| |||||||| |||||| ||||||| | ||||||||    
T  40812184 agcattcacttttttattggataaaattaatgtatgacctacactttggaaatgaaacccacgttaaatggtg 40812112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Complemental strand, 40991743 - 40991703
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaat 76  Q
    ||||||||||| |||||||||||| ||||||||||||||||    
T  40991743 cactctctctatcactcactctttcattggatgaaatcaat 40991703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 44832472 - 44832532
Alignment:
Q  19 caacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| ||||||||||| ||| |||| |||||||| ||||||||| |||||| ||||||    
T  44832472 caacattctcttttgagcattctttctatcactcacttttttattgggtgaaattaatgta 44832532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 17 - 64
Target Start/End: Complemental strand, 20454713 - 20454666
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattg 64  Q
    ||||||||| |||||||| ||||||||||| |||||||||| ||||||    
T  20454713 agcaacattctcttttgaacactctctctaacactcactctgttattg 20454666  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 39 - 98
Target Start/End: Original strand, 49738950 - 49739009
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaat 98  Q
    |||||||| |||||||||||||||| | ||||||| |||| || |||||||||| |||||    
T  49738950 tctctctaacactcactcttttatttggtgaaatccatgtgggtcatacactttggaaat 49739009  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #43
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 2088826 - 2088776
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| |||||||||| |||||||||||| ||||  |||||||||||||    
T  2088826 ttttgagtactctctctaacactcactctttaattgagtgaaatcaatgta 2088776  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #44
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 39 - 125
Target Start/End: Original strand, 41278644 - 41278730
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||| || | ||||||||||||| ||| || ||||||||||  ||| |||  ||||||||||||| |||| |||| |||||||    
T  41278644 tctctctaacatttactcttttattgggtgatatgaatgtaggaccaacattttgaaaatggaacccacataaagtggtaggacata 41278730  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #45
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 78
Target Start/End: Original strand, 47009215 - 47009257
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgt 78  Q
    |||||| ||||||||||||||||||||||||| |||| |||||    
T  47009215 cactctttctagcactcactcttttattggataaaattaatgt 47009257  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 40 - 73
Target Start/End: Complemental strand, 20225491 - 20225458
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatc 73  Q
    ||||||||||||||||||||||||||||| ||||    
T  20225491 ctctctagcactcactcttttattggatggaatc 20225458  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #47
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 5545754 - 5545646
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| |||||||||||  ||| ||| ||| ||| | | |||||||||| || | |||| |||  ||||||| ||||| |||| |||    
T  5545754 agcaacactctcttttgaacactctctctaatacttactttttaatttgcttaaatcaatgtgggtcttacattttgaaaatggagcccacataaagtgg 5545655  T
Q  117 tgggacata 125  Q
    |||||||||    
T  5545654 tgggacata 5545646  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 31 - 79
Target Start/End: Complemental strand, 48339499 - 48339451
Alignment:
Q  31 ttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||| || |||||||||| ||||||||  |||||||||||    
T  48339499 ttgagcactctctttaacactcactctcttattggaataaatcaatgta 48339451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 28 - 64
Target Start/End: Original strand, 50879474 - 50879510
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattg 64  Q
    ||||||| |||||| ||||||||||||||||||||||    
T  50879474 cttttgaacactctttctagcactcactcttttattg 50879510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 131; Significance: 9e-68; HSPs: 35)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 131; E-Value: 9e-68
Query Start/End: Original strand, 214 - 427
Target Start/End: Complemental strand, 31148493 - 31148279
Alignment:
Q  214 ggtgccgtttaatttgggaaagcaaacnnnnnnnccatcatgggaaagttaaaccaagaccatagattt-aatattttataatttggatggctcagattt 312  Q
    |||||||||||||||||||||||| ||       ||||||||||||||||||||||||||||||||||| |||| ||| |||||||||||||||||||||    
T  31148493 ggtgccgtttaatttgggaaagcacacttttttcccatcatgggaaagttaaaccaagaccatagattttaatactttttaatttggatggctcagattt 31148394  T
Q  313 attacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttctt-ttttgtatgtagtagtgggcttt 411  Q
    | ||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||| ||||    
T  31148393 actac-tgttaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataacatttttttgttttggatgtagtagtggacttt 31148295  T
Q  412 ggcaataatttttggg 427  Q
     |||||||||| ||||    
T  31148294 tgcaataatttctggg 31148279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 42224595 - 42224703
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||| |||    
T  42224595 agcaacactctcttttgagaactctctccagcactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtgg 42224694  T
Q  117 tgggacata 125  Q
    |||||||||    
T  42224695 tgggacata 42224703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 66; E-Value: 5e-29
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 24915208 - 24915123
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||  ||||||||||||| |||| ||||||||||||    
T  24915208 ctctctagcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacccacataaagtggtgggacata 24915123  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 17568706 - 17568814
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||| ||||| || |||| |||    
T  17568706 agcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacactttggaaatagaacctacctaaagtgg 17568805  T
Q  117 tgggacata 125  Q
    |||||||||    
T  17568806 tgggacata 17568814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 62; E-Value: 1e-26
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 24991039 - 24990954
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||||||||||||||||| ||||||||||||||||||||||||||  |||||||||| || |||| ||||||||||||    
T  24991039 ctctctagcactcactcttttattgggtgaaatcaatgtaggacatacactttgaaaatggaacctacataaagtggtgggacata 24990954  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 57; E-Value: 1e-23
Query Start/End: Original strand, 20 - 112
Target Start/End: Complemental strand, 34818359 - 34818267
Alignment:
Q  20 aacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 112  Q
    |||||| |||||||||||||||||||| |||||||| ||||||| | | ||||||||||||||| || |||||||||||||||||||| ||||    
T  34818359 aacattctcttttgagcactctctctaacactcacttttttatttggtaaaatcaatgtaggacctatactttagaaatggaacccacataaa 34818267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 55; E-Value: 2e-22
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 4959444 - 4959346
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||||||||||||||||||||||||||||||  ||||||||||||  || ||||||||  ||||| ||||||| ||||||| || ||||||    
T  4959444 tcttttgagcactctctctagcactcactcttttattgggggaaatcaatgtatcacctacactttgaaaatgtaacccacataaaatgatgagacata 4959346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 40 - 121
Target Start/End: Original strand, 13456192 - 13456273
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtggga 121  Q
    |||||||||||||||||||||||| | ||||||||||||||| | ||||||||  ||||||||||||| |||||||||||||    
T  13456192 ctctctagcactcactcttttattaggtgaaatcaatgtaggtcctacactttgaaaatggaacccacataaaatggtggga 13456273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 26072279 - 26072171
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||| ||||||||||||||||||||||||||| ||||| |||||| |||| |||||||| |||||| |  |||| |||| |||    
T  26072279 agcaacactctcttttgagcattctctctagcactcactcttttattgggtgaaaacaatgtgggacctacactttggaaatgaattccacataaagtgg 26072180  T
Q  117 tgggacata 125  Q
    || ||||||    
T  26072179 tgagacata 26072171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 8912688 - 8912578
Alignment:
Q  17 agcaacattatcttttgagcac--tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaat 114  Q
    ||||||| | ||||||||||||  |||||||| |||||||||||||||| | |||||||||| || |||||||||||| |||||| |||||||  ||| |    
T  8912688 agcaacagtctcttttgagcacactctctctatcactcactcttttattaggtgaaatcaatatatgacatacactttggaaatgaaacccacagaaagt 8912589  T
Q  115 ggtgggacata 125  Q
    || ||||||||    
T  8912588 ggagggacata 8912578  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 42224764 - 42224702
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||| | |||||||||||||    
T  42224764 agcaacactctcttttgagcactctctctagcactcactcttttattaggtgaaatcaatgta 42224702  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 6264057 - 6263951
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||| |||||||| ||||||||||||||||||| ||| ||||||||||||| ||   ||||||| ||| |||||||||  |||| |||    
T  6264057 agcaacactctcttttaagcactctatctagcactcactcttttagtgggtgaaatcaatgtaagatcaacactttggaactggaaccca--taaagtgg 6263960  T
Q  117 tgggacata 125  Q
    |||||||||    
T  6263959 tgggacata 6263951  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 32050483 - 32050375
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||| ||||||||||||||||| ||||||||| ||||||||||||| |    |||||||  ||||||||||||| |||| ||     
T  32050483 agcaacactctcttttgagcattctctctagcactcacttttttattgggtgaaatcaatgtatgttccacactttgaaaatggaacccacataaagtga 32050384  T
Q  117 tgggacata 125  Q
    || ||||||    
T  32050383 tgagacata 32050375  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 40971457 - 40971565
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| |||||| |||| |||||||| ||||||||| | ||||||||||| ||| |||||||| |||||| |||  || |||| |||    
T  40971457 agcaacactctcttttgaacactctatctaacactcactattttattgggtaaaatcaatgtaagacctacactttggaaatgaaacttacataaagtgg 40971556  T
Q  117 tgggacata 125  Q
    |||||||||    
T  40971557 tgggacata 40971565  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 40971616 - 40971564
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||||||||||||  |||||||||||||    
T  40971616 tcttttgagcactctctctagcactcactcttttattgagtgaaatcaatgta 40971564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 4959285 - 4959347
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||||||||||||||  || |||||||||||||| |||||||||||||    
T  4959285 agcaacactctcttttgagcactctctctaatacccactcttttattgggtgaaatcaatgta 4959347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 30326047 - 30325985
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  30326047 agcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 30325985  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 27592606 - 27592563
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  27592606 cactctctttagcactcactattttattggatgaaatcaatgta 27592563  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 344 - 387
Target Start/End: Original strand, 36219754 - 36219797
Alignment:
Q  344 aaacaaaaattgtgaccccacctcataattaaataacattttct 387  Q
    |||||||||| |||||||||||||||||||||||||| ||||||    
T  36219754 aaacaaaaatcgtgaccccacctcataattaaataaccttttct 36219797  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Complemental strand, 17568866 - 17568816
Alignment:
Q  26 atcttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||||| |||||| |||||||||||||||||||||  ||||||||||    
T  17568866 atcttttgagtactctccctagcactcactcttttattgagtgaaatcaat 17568816  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 76
Target Start/End: Original strand, 6263900 - 6263949
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||||||||||||||| ||||||||| |||||||| | ||||||||    
T  6263900 tcttttgagcactctctctatcactcactcctttattgggtaaaatcaat 6263949  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Complemental strand, 10142126 - 10142087
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||| ||||||||||||||||||||||| |||||||||||    
T  10142126 ctctatagcactcactcttttattggataaaatcaatgta 10142087  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 17537256 - 17537213
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| |||||||||||||||| ||| |||||||||||    
T  17537256 cactctctctatcactcactcttttatttgatcaaatcaatgta 17537213  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #24
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 248 - 310
Target Start/End: Original strand, 4301939 - 4302001
Alignment:
Q  248 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagat 310  Q
    |||||||||||||||  ||| ||  |||||||||||||||||| | |||||||||||| ||||    
T  4301939 ccatcatgggaaagtcgaactaaagccatagatttaatatttttttatttggatggctaagat 4302001  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #25
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 49 - 79
Target Start/End: Complemental strand, 5413878 - 5413848
Alignment:
Q  49 actcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||||||||||    
T  5413878 actcactcttttattggatgaaatcaatgta 5413848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #26
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 48 - 122
Target Start/End: Original strand, 27726833 - 27726907
Alignment:
Q  48 cactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggac 122  Q
    |||||||||||||||||| |||||| ||||| || | |||||||| |||||||  |||||| ||| |||| ||||    
T  27726833 cactcactcttttattgggtgaaattaatgtgggtcctacactttggaaatgggtcccactcaaagtggttggac 27726907  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #27
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 37 - 75
Target Start/End: Complemental strand, 28490875 - 28490837
Alignment:
Q  37 actctctctagcactcactcttttattggatgaaatcaa 75  Q
    ||||||||||||| ||||| |||||||||||||||||||    
T  28490875 actctctctagcattcacttttttattggatgaaatcaa 28490837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #28
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 25 - 79
Target Start/End: Complemental strand, 31542408 - 31542354
Alignment:
Q  25 tatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||| |||||| |  |||||||| |||||| ||||||    
T  31542408 tatcttttgagcactctctctaacactcatttatttattgggtgaaattaatgta 31542354  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #29
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 13456326 - 13456276
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||| |   |||||||||||||| ||||||||||||||||    
T  13456326 tcttttgagcactctctatt--actcactcttttatcggatgaaatcaatgta 13456276  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #30
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 1649567 - 1649619
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||| | ||||||||||| |||||||| | |||||||||||||| ||||||    
T  1649567 tcttttcaacactctctctaacactcactatcttattggatgaaattaatgta 1649619  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #31
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 79
Target Start/End: Original strand, 14553520 - 14553567
Alignment:
Q  34 agcactctctctagcactcactct--tttattggatgaaatcaatgta 79  Q
    |||||||| |||||||||||||||  ||||||||||||||| ||||||    
T  14553520 agcactctttctagcactcactctcttttattggatgaaattaatgta 14553567  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #32
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 26072120 - 26072172
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||| ||||  ||||| |||||| |||| |||||||||||||    
T  26072120 tcttttgagcactctttctaatactcattctttttttgggtgaaatcaatgta 26072172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #33
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 43 - 79
Target Start/End: Complemental strand, 28155847 - 28155811
Alignment:
Q  43 tctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| |||||||||||| ||||||||||||||    
T  28155847 tctagcacttactcttttattgaatgaaatcaatgta 28155811  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #34
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 122
Target Start/End: Original strand, 31542268 - 31542352
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttag-aaatggaacccacttaaaatggtgggac 122  Q
    ||||||||| ||||  ||||||||||| |||||||| ||||||||  ||| ||||| |||||||| |||| |||| || ||||||    
T  31542268 tctctctaggactcgttcttttattgggtgaaatcactgtaggacccacattttagaaaatggaatccacataaagtgatgggac 31542352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #35
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 32309509 - 32309549
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||| ||||||||| |||| ||||||    
T  32309509 tctctctagcactcactctcttattggataaaattaatgta 32309549  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 112; Significance: 2e-56; HSPs: 46)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 112; E-Value: 2e-56
Query Start/End: Original strand, 257 - 396
Target Start/End: Original strand, 5353544 - 5353683
Alignment:
Q  257 gaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaacaaaaattgt 356  Q
    |||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5353544 gaaagttaaaccaagatcatagatttaatattttataatttggatggttcagatttattacctgctaactttttgttgggttatataaaacaaaaattgt 5353643  T
Q  357 gaccccacctcataattaaataacattttcttttttgtat 396  Q
    ||||| ||||||||| ||||||| || |||| ||||||||    
T  5353644 gacccaacctcataagtaaataatatcttctgttttgtat 5353683  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 103; E-Value: 5e-51
Query Start/End: Original strand, 248 - 398
Target Start/End: Original strand, 32994959 - 32995109
Alignment:
Q  248 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaactttttgttgggttatataaaac 347  Q
    ||||||||||||||||||||||||  ||||||||||||||||| |||||||||||| | ||||| ||| |||  |||||||||| |||||||||||||||    
T  32994959 ccatcatgggaaagttaaaccaaggtcatagatttaatattttttaatttggatggtttagattcattgcctattaactttttgatgggttatataaaac 32995058  T
Q  348 aaaaattgtgaccccacctcataattaaataacattttcttttttgtatgt 398  Q
    |||||||||||| |||||||||| |||||||||||||||||||||||||||    
T  32995059 aaaaattgtgactccacctcatatttaaataacattttcttttttgtatgt 32995109  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 89; E-Value: 1e-42
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 24748914 - 24749022
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||    
T  24748914 agcaacactctcttttgagcactctctctaacactcactcttttattggatgaaatcaatgtaggacctacactttagaaatggaacccacataaaatgg 24749013  T
Q  117 tgggacata 125  Q
    |||||||||    
T  24749014 tgggacata 24749022  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 37600134 - 37600242
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||||||||||| |||||||||||||| |||| |||||||||||| ||||||||||||||||||||||| |||| |||    
T  37600134 agcaacactctcttttgagcactctctctagcacccactcttttattggttgaattcaatgtaggacctacactttagaaatggaacccacataaagtgg 37600233  T
Q  117 tgggacata 125  Q
    |||||||||    
T  37600234 tgggacata 37600242  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 75; E-Value: 2e-34
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 10769739 - 10769837
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||| ||||||||||||||||||||||  |||| ||||||||||||    
T  10769739 tcttttgagcactctctctagcacttactcttttatttgatgaaatcaatgtaggacctacactttagaaatggaacccatataaagtggtgggacata 10769837  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 54140897 - 54141005
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||||| |||||||||||||||| ||||||||||||||||||||||| || ||||||||  ||||||||||||| |||| |||    
T  54140897 agcaacactctcttttgagcactttctctagcactcactcatttattggatgaaatcaatgtagaacctacactttgaaaatggaacccacgtaaagtgg 54140996  T
Q  117 tgggacata 125  Q
    |||||||||    
T  54140997 tgggacata 54141005  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 56; E-Value: 5e-23
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 29775146 - 29775234
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccac 107  Q
    ||||||| | ||||||||||||||||||||||||  ||||||||||||| ||||||||| ||||||| |||||||| ||||||||||||||    
T  29775146 agcaacactctcttttgagcactctctctagcac--actcttttattgggtgaaatcaaggtaggacctacactttggaaatggaacccac 29775234  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 54; E-Value: 8e-22
Query Start/End: Original strand, 17 - 106
Target Start/End: Original strand, 38928013 - 38928102
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaaccca 106  Q
    ||||||| | |||||||| |||| |||||| |||||||||||||||||| ||||||||||||| ||| |||||||| |||||||||||||    
T  38928013 agcaacactctcttttgatcactttctctaacactcactcttttattgggtgaaatcaatgtaagacctacactttggaaatggaaccca 38928102  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 46237090 - 46237158
Alignment:
Q  57 ttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||||||||||||||||||| |||| |||||||||||||||||| |||| ||||||||||||    
T  46237090 ttttattggatgaaatcaatgtaggacctacattttagaaatggaacccacataaagtggtgggacata 46237158  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 46237219 - 46237157
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  46237219 agcaacactctcttttgagcactctctctagcaatcactcttttattggatgaaatcaatgta 46237157  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 124
Target Start/End: Complemental strand, 27243221 - 27243114
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| |||||| ||||  ||||||||| | ||||| | |||||||||| || |||||||||| |||||||||||||| |||| |||    
T  27243221 agcaacactctcttttgaacactctttctaatactcactctctcattgggttaaatcaatgtgggtcatacactttggaaatggaacccacataaagtgg 27243122  T
Q  117 tgggacat 124  Q
    ||||||||    
T  27243121 tgggacat 27243114  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 40 - 118
Target Start/End: Complemental strand, 357913 - 357835
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtg 118  Q
    ||||||| |||||||| |||||||||||||||||||||||||   |||||||| |||||||||||||| |||| |||||    
T  357913 ctctctatcactcacttttttattggatgaaatcaatgtaggtactacactttggaaatggaacccacataaagtggtg 357835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 46; E-Value: 5e-17
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 44844138 - 44844049
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||| |||||||| ||||||||||| |||||| ||| || ||||||||||| |||| |||| ||| | |||||||||||||||    
T  44844138 cactctctctaacactcacttttttattggattaaatcattgtgggtcatacactttaaaaattgaactcacatgaaatggtgggacata 44844049  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 37600293 - 37600241
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||| |||||||||||||| |||||||||||||    
T  37600293 tcttttgagcactctctctagcacccactcttttattgggtgaaatcaatgta 37600241  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 54141056 - 54141004
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  54141056 tcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 54141004  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 28529279 - 28529322
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  28529279 cactctctctagcactcactcttttattggatgaaatcaatgta 28529322  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 77
Target Start/End: Original strand, 27243052 - 27243112
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 77  Q
    ||||||| | |||||||| ||||||||||| |||||||||||||||||||| |||||||||    
T  27243052 agcaacactctcttttgaacactctctctaacactcactcttttattggataaaatcaatg 27243112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 26310600 - 26310557
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||| |||||||||||||||||||||||||||    
T  26310600 cactctctctagcacttactcttttattggatgaaatcaatgta 26310557  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 13809238 - 13809149
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||| |||||| || ||| ||| ||||||| | ||| |||||| || |||| ||||| |||||||||||||| |||||||||||||||||    
T  13809238 cactttctctaacattcattctcttattgggttaaaacaatgtgggtcatatactttggaaatggaacccacataaaatggtgggacata 13809149  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 30 - 79
Target Start/End: Complemental strand, 43657156 - 43657107
Alignment:
Q  30 tttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||| ||||||||||||||| ||||||| |||||||||||||||    
T  43657156 tttgagcactttctctagcactcactattttatttgatgaaatcaatgta 43657107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 55 - 124
Target Start/End: Original strand, 50661564 - 50661633
Alignment:
Q  55 tcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 124  Q
    ||||||||||| | |||||||||| || |||||| ||| |||||||||||||| |||| |||||||||||    
T  50661564 tcttttattgggttaaatcaatgtgggtcatacattttggaaatggaacccacataaagtggtgggacat 50661633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 40 - 76
Target Start/End: Original strand, 46160977 - 46161013
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||||||||||||||||||||||||||||||||    
T  46160977 ctctctagcactcactcttttattggatgaaatcaat 46161013  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 138793 - 138832
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||| ||||||||||||||    
T  138793 ctctctagcactcactcttttattgaatgaaatcaatgta 138832  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 20493599 - 20493556
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| ||||||||| ||||||||||||||||||||||    
T  20493599 cactctctctaacactcactcatttattggatgaaatcaatgta 20493556  T

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Target: chr3; HSP #25
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 20791322 - 20791365
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||| ||||||||||| |||||||||||||||||||||||    
T  20791322 cactctctttagcactcactattttattggatgaaatcaatgta 20791365  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 28 - 79
Target Start/End: Complemental strand, 41707601 - 41707550
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||| |||||||||| | ||||||| |||||||||||    
T  41707601 cttttgagcactctctctaacactcactctctcattggataaaatcaatgta 41707550  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 248 - 319
Target Start/End: Original strand, 44064223 - 44064294
Alignment:
Q  248 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacct 319  Q
    |||||||||||||||| |||||  ||||||||||||||| ||| | ||||| |||||| |||||||| ||||    
T  44064223 ccatcatgggaaagttgaaccacaaccatagatttaatacttttttatttgaatggctaagatttatgacct 44064294  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 10769898 - 10769836
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||||||||||||||| |||  ||||||||||| | |||||||||||||    
T  10769898 agcaacactctcttttgagcactctctctatcaccgactcttttatttggtgaaatcaatgta 10769836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 75
Target Start/End: Complemental strand, 52951533 - 52951475
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 75  Q
    ||||||| | |||||| | |||||||||||||||||||||| | |||||||||||||||    
T  52951533 agcaacactctctttttaacactctctctagcactcactctctcattggatgaaatcaa 52951475  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 14236045 - 14236085
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||| ||||||||||| ||||||||||||||||||||    
T  14236045 cactctctttagcactcactattttattggatgaaatcaat 14236085  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 21232685 - 21232633
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||| ||| ||||||||| | ||||||||| |||||||||||||    
T  21232685 tcttttgagcactttctttagcactcatttttttattgggtgaaatcaatgta 21232633  T

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Target: chr3; HSP #32
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 5452214 - 5452171
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||| || || |||||||||||||||||||||||||||||    
T  5452214 cactctctttaacattcactcttttattggatgaaatcaatgta 5452171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 37776857 - 37776814
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||| |||| |||||||||||||||||| |||||||||||||||    
T  37776857 cactttctccagcactcactcttttattagatgaaatcaatgta 37776814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #34
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 45515649 - 45515606
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| | |||||||| |||||||||||||||||||||||    
T  45515649 cactctctccaacactcactattttattggatgaaatcaatgta 45515606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #35
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 46450095 - 46450134
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||| |||| ||||||||||    
T  46450095 ctctctagcactcactcttttattagatggaatcaatgta 46450134  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #36
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 75
Target Start/End: Original strand, 24734736 - 24734770
Alignment:
Q  41 tctctagcactcactcttttattggatgaaatcaa 75  Q
    ||||||| |||||||||||||||||||||||||||    
T  24734736 tctctagtactcactcttttattggatgaaatcaa 24734770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #37
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 38928182 - 38928120
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| ||||||||| ||||| ||||||| | ||| ||||||||||| | |||||||||||    
T  38928182 agcaacactatcttttgtgcactatctctagtattcagtcttttattgggtaaaatcaatgta 38928120  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #38
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 41 - 75
Target Start/End: Complemental strand, 41452044 - 41452010
Alignment:
Q  41 tctctagcactcactcttttattggatgaaatcaa 75  Q
    ||||||| |||||||||||||||||||||||||||    
T  41452044 tctctagtactcactcttttattggatgaaatcaa 41452010  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #39
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 36 - 118
Target Start/End: Original strand, 42780696 - 42780778
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtg 118  Q
    ||||||||||| |||||| ||| ||||||||||||||| ||||||| |  ||||||   ||||||| ||||| |||| |||||    
T  42780696 cactctctctaacactcattctcttattggatgaaatccatgtaggtctcacacttagaaaatggatcccacataaagtggtg 42780778  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #40
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 81
Target Start/End: Original strand, 39185263 - 39185308
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtagg 81  Q
    |||||||| ||||||||||| ||||||| || ||||||||||||||    
T  39185263 cactctctttagcactcactattttatttgaagaaatcaatgtagg 39185308  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #41
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 338 - 383
Target Start/End: Complemental strand, 45806951 - 45806906
Alignment:
Q  338 tatataaaacaaaaattgtgaccccacctcataattaaataacatt 383  Q
    ||||| |||||||||  ||||||||||| |||||||||||||||||    
T  45806951 tatattaaacaaaaacagtgaccccaccccataattaaataacatt 45806906  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #42
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 13639428 - 13639464
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaat 72  Q
    ||||||||||| || ||||||||||||||||||||||    
T  13639428 cactctctctaacagtcactcttttattggatgaaat 13639464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #43
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 24734880 - 24734773
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| |||||||||||  ||||||||| ||||||| | |||||| ||| || | ||| ||||  |||| ||||||||  ||| |||    
T  24734880 agcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgt-gggcctactctttgaaaattgaacccacacaaagtgg 24734782  T
Q  117 tgggacata 125  Q
    |||||||||    
T  24734781 tgggacata 24734773  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #44
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 41451900 - 41452007
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| |||||||||||  ||||||||| ||||||| | |||||| ||| || | ||| ||||  |||| ||||||||  ||| |||    
T  41451900 agcaacactctcttttgaacactctctctaatactcactctcttattggtttaaatcattgtgggtc-tactctttgaaaattgaacccacacaaagtgg 41451998  T
Q  117 tgggacata 125  Q
    |||||||||    
T  41451999 tgggacata 41452007  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #45
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 57 - 125
Target Start/End: Original strand, 43657040 - 43657108
Alignment:
Q  57 ttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||| | ||||| ||||||  ||| |||||||| |||||||||| ||| |||| ||||||||||||    
T  43657040 ttttatttggtgaaaacaatgtgagacctacactttggaaatggaactcacataaagtggtgggacata 43657108  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #46
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 77
Target Start/End: Complemental strand, 50661695 - 50661635
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 77  Q
    ||||||| | |||||| | ||||||||||| |||| ||||||||||| ||| |||||||||    
T  50661695 agcaacactctcttttaaacactctctctaacacttactcttttattagataaaatcaatg 50661635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 77; Significance: 1e-35; HSPs: 54)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 77; E-Value: 1e-35
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 11135915 - 11135807
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||||| |||| |||    
T  11135915 agcaacactctcttttgaggactctctctagcactcactcttttattgggtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtgg 11135816  T
Q  117 tgggacata 125  Q
    |||||||||    
T  11135815 tgggacata 11135807  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 11430616 - 11430509
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||||||||||||||||||||||||||||||| |||| |||||||||||| |||||||| |||||||||||||| |||| |||    
T  11430616 agcaacactctcttttgagcactctctctagcactcactcttttattgg-tgaattcaatgtaggacctacactttggaaatggaacccacataaagtgg 11430518  T
Q  117 tgggacata 125  Q
    |||||||||    
T  11430517 tgggacata 11430509  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 32848587 - 32848695
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||| ||||||||  |||||||| |||| |||| |||    
T  32848587 agcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgtaggacctacactttgaaaatggaatccacataaagtgg 32848686  T
Q  117 tgggacata 125  Q
    |||||||||    
T  32848687 tgggacata 32848695  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 59; E-Value: 8e-25
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 41095613 - 41095703
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccac 107  Q
    ||||||| | |||||||||||||||||||||||||||||  |||||||| ||||||||||||||||| ||||||||  |||||||||||||    
T  41095613 agcaacactctcttttgagcactctctctagcactcacttatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccac 41095703  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 53; E-Value: 3e-21
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 14094005 - 14094113
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| |||||| | || |||||||| ||| ||||  ||||||||||||||||| |||||||| |||||||||||||| |||| |||    
T  14094005 agcaacactctcttttgaacactctttgtaacactcactttttgattgagtgaaatcaatgtaggacctacactttggaaatggaacccacataaagtgg 14094104  T
Q  117 tgggacata 125  Q
    |||||||||    
T  14094105 tgggacata 14094113  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 51; E-Value: 5e-20
Query Start/End: Original strand, 27 - 125
Target Start/End: Original strand, 50773125 - 50773223
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||| |||||||||||||||||| ||||||||||| | |||| |||||||||| || | ||| |||||||||||||| |||| |||||| |||||    
T  50773125 tcttttgaacactctctctagcactcattcttttattgggtaaaattaatgtaggacctatattttggaaatggaacccacataaagtggtggaacata 50773223  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 46 - 125
Target Start/End: Complemental strand, 41918142 - 41918063
Alignment:
Q  46 agcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||||||||||| | ||||||||||||||| ||||||||  |||||||| |||| |||| ||||||||||||    
T  41918142 agcactcactcttttattgggtaaaatcaatgtaggacctacactttgaaaatggaatccacataaagtggtgggacata 41918063  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 11135746 - 11135808
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||||| |||||||||||||    
T  11135746 agcaacactctcttttgagcactctctctagcactcactattttattgggtgaaatcaatgta 11135808  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 107
Target Start/End: Original strand, 13388341 - 13388431
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccac 107  Q
    ||||||| | ||||||||  |||||||||| |||||||| |||||||||||||||||||||||| || ||||||||  ||||| |||||||    
T  13388341 agcaacactctcttttgaatactctctctaacactcacttttttattggatgaaatcaatgtagtacctacactttgaaaatgaaacccac 13388431  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 19 - 77
Target Start/End: Original strand, 28109877 - 28109935
Alignment:
Q  19 caacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatg 77  Q
    ||||||||||||||||||||| ||||||||||||||| ||||||||| |||||||||||    
T  28109877 caacattatcttttgagcactttctctagcactcacttttttattgggtgaaatcaatg 28109935  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 41095782 - 41095720
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||| |||||||||||||    
T  41095782 agcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgta 41095720  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 41918002 - 41918064
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||||||| |||||||||||||||||||||||||| |||||||||||||    
T  41918002 agcaacactctcttttgagcaccctctctagcactcactcttttattgggtgaaatcaatgta 41918064  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 11430458 - 11430510
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||| ||||||||||||||||||||||| |||||||||||||    
T  11430458 tcttttgagcactctttctagcactcactcttttattgggtgaaatcaatgta 11430510  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 21 - 79
Target Start/End: Complemental strand, 14094170 - 14094112
Alignment:
Q  21 acattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||| ||||||||| |||||||||| ||||||||| |||||||||||||    
T  14094170 acattatcttttgaacactctctccagcactcacttttttattgggtgaaatcaatgta 14094112  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 28110033 - 28109937
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 124  Q
    |||||| || ||| ||||||  ||||||| |||||||||||||||||| | |||||  |||||||| |||||||||||||| ||||||||||| ||||    
T  28110033 tcttttaagtactttctctaatactcacttttttattggatgaaatcattctaggatctacacttt-gaaatggaacccacataaaatggtggaacat 28109937  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 112
Target Start/End: Complemental strand, 43832435 - 43832350
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaa 112  Q
    |||||||| |||||| ||||||| ||||||||||||| |  |||||||||||||||  |||||||| |||||| ||||||| ||||    
T  43832435 tcttttgaacactctttctagcattcactcttttattcggcgaaatcaatgtaggatctacactttggaaatgaaacccacataaa 43832350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 41 - 121
Target Start/End: Original strand, 24436495 - 24436575
Alignment:
Q  41 tctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtggga 121  Q
    |||||| ||||| |||||||||||| |||||||||||||||||  |||||||  |||| |||||||| |||| ||||||||    
T  24436495 tctctaacactccctcttttattgggtgaaatcaatgtaggacccacactttgaaaatagaacccacataaagtggtggga 24436575  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 32848746 - 32848694
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||| |||||||||||||||||||||||||||||| |||||||| ||||    
T  32848746 tcttttgaacactctctctagcactcactcttttattgggtgaaatcattgta 32848694  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 17 - 120
Target Start/End: Original strand, 50424870 - 50424973
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||  |||||||||||| || ||||| ||||||||| | |||||||||| || |||||||||| ||||||||||  || |||| |||    
T  50424870 agcaacactctcttttaggcactctctctaacattcacttttttattgggttaaatcaatgtgggtcatacactttggaaatggaacttacataaagtgg 50424969  T
Q  117 tggg 120  Q
    ||||    
T  50424970 tggg 50424973  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 19101774 - 19101712
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  19101774 agcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 19101712  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 22540375 - 22540437
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  22540375 agcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 22540437  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 17 - 118
Target Start/End: Complemental strand, 29418658 - 29418556
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactctttt-attggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatg 115  Q
    ||||||| | |||||||| |||||||| || |||||||| |||| ||||| ||||||||||||||||  |||||||| ||||| |||| ||| |||| ||    
T  29418658 agcaacagtctcttttgatcactctctatatcactcactttttttattgggtgaaatcaatgtaggatctacactttggaaatagaactcacataaagtg 29418559  T
Q  116 gtg 118  Q
    |||    
T  29418558 gtg 29418556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 39; E-Value: 0.0000000000007
Query Start/End: Original strand, 25 - 75
Target Start/End: Original strand, 50308772 - 50308822
Alignment:
Q  25 tatcttttgagcactctctctagcactcactcttttattggatgaaatcaa 75  Q
    |||||||| |||| ||||||||||||||||||||||||||| |||||||||    
T  50308772 tatcttttaagcattctctctagcactcactcttttattgggtgaaatcaa 50308822  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 9165319 - 9165371
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||| |||||| ||| ||||||||||||||||||| |||||||||||||    
T  9165319 tcttttgaccactctatcttgcactcactcttttattgggtgaaatcaatgta 9165371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 15523219 - 15523279
Alignment:
Q  19 caacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  15523219 caacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 15523279  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 15531213 - 15531273
Alignment:
Q  19 caacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||||||||    
T  15531213 caacattcacttttgcacactctctttagcactcactattttattggatgaaatcaatgta 15531273  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 2225254 - 2225293
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| ||||||||||||||||||||||||||||    
T  2225254 ctctctagcacccactcttttattggatgaaatcaatgta 2225293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 32211938 - 32211895
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| |||||||||||||||||| |||||||||||||||    
T  32211938 cactctctccagcactcactcttttattagatgaaatcaatgta 32211895  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 21466744 - 21466682
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||  ||||||  |||||||| ||||||||||| |||||||||||||||||| ||||    
T  21466744 agcaacattcacttttgcacactctctttagcactcactattttattggatgaaatcagtgta 21466682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #30
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 44739125 - 44739187
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||| ||||||||||||||||||||||||| |||  |||||| ||||||    
T  44739125 agcaacactctcttttgaacactctctctagcactcactcttttcttgagtgaaattaatgta 44739187  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #31
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 40 - 81
Target Start/End: Complemental strand, 4578727 - 4578686
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtagg 81  Q
    ||||||| |||||||||||||||||| |||||||||||||||    
T  4578727 ctctctaacactcactcttttattgggtgaaatcaatgtagg 4578686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #32
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 39 - 76
Target Start/End: Complemental strand, 6133775 - 6133738
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||||||||||| |||||||||||||||||||||    
T  6133775 tctctctagcactcacccttttattggatgaaatcaat 6133738  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #33
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 38 - 79
Target Start/End: Complemental strand, 28218200 - 28218159
Alignment:
Q  38 ctctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||| ||||| |||||||||||||||||||||||||||||    
T  28218200 ctctctttagcattcactcttttattggatgaaatcaatgta 28218159  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #34
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 13114674 - 13114782
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||  ||||||||||| |||||||| | | ||||| | |||||||||| ||  ||||| ||| ||||||||| |||  |||| |||    
T  13114674 agcaacactctcttttggacactctctctaacactcactatctcattgggttaaatcaatgtgggttatacattttggaaatggaatccatataaagtgg 13114773  T
Q  117 tgggacata 125  Q
    |||||||||    
T  13114774 tgggacata 13114782  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #35
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 29 - 125
Target Start/End: Original strand, 30678928 - 30679023
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||||||||| |||||||||| ||||||| | |||||| |||  | | ||||||||  |||| ||||||||  ||| ||||||||||||    
T  30678928 ttttgagcactctctctaacactcactctcttattggcttaaatcattgtgagtc-tacactttgaaaattgaacccacacaaagtggtgggacata 30679023  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #36
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 26980416 - 26980373
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||  ||||||||| |||||||||||||||||||||    
T  26980416 cactctctctaatactcactctattattggatgaaatcaatgta 26980373  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #37
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 75
Target Start/End: Complemental strand, 39039509 - 39039470
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaa 75  Q
    |||||| | |||||||||||||||||||||||||||||||    
T  39039509 cactctttttagcactcactcttttattggatgaaatcaa 39039470  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #38
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 41958113 - 41958152
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||| ||||||||||| ||||||||||||||||||||||    
T  41958113 ctctcaagcactcactcatttattggatgaaatcaatgta 41958152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #39
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 37 - 76
Target Start/End: Complemental strand, 50425019 - 50424980
Alignment:
Q  37 actctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||||| |||||||||||||||||||| ||||||||    
T  50425019 actctctctaacactcactcttttattggataaaatcaat 50424980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #40
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 15661057 - 15660962
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 124  Q
    |||||||  ||||||||||| |||||||||| ||||||| | ||||||||||  | |||||| ||| |||||  ||||| | |||| |||||||||||    
T  15661057 tcttttggacactctctctaacactcactctattattgggttaaatcaatgt--gtcatacattttggaaataaaacccgcataaagtggtgggacat 15660962  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #41
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 43851208 - 43851146
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||| ||| | |||||||| |||||||| |||||||| |||||||||||||    
T  43851208 agcaacactctcttttaagcgcactctctagtactcactcatttattgggtgaaatcaatgta 43851146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #42
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 38 - 76
Target Start/End: Complemental strand, 50773263 - 50773225
Alignment:
Q  38 ctctctctagcactcactcttttattggatgaaatcaat 76  Q
    ||||||||| |||||||||||||||||||| ||||||||    
T  50773263 ctctctctaacactcactcttttattggataaaatcaat 50773225  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #43
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 48 - 93
Target Start/End: Original strand, 8665251 - 8665296
Alignment:
Q  48 cactcactcttttattggatgaaatcaatgtaggacatacacttta 93  Q
    ||||||||||||||||| |||||||||||||||  | |||||||||    
T  8665251 cactcactcttttattgaatgaaatcaatgtagatcctacacttta 8665296  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #44
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 13114833 - 13114784
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||  ||||||||||| |||||||||||||||| ||| ||||||||    
T  13114833 tcttttggacactctctctaacactcactcttttattagataaaatcaat 13114784  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #45
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 46 - 79
Target Start/End: Complemental strand, 13388483 - 13388450
Alignment:
Q  46 agcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||| |||||||||||||    
T  13388483 agcactcactcttttattgggtgaaatcaatgta 13388450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #46
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 29 - 78
Target Start/End: Complemental strand, 37553110 - 37553061
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 78  Q
    |||||| |||||||||||||||| ||| | |||||||||||||| |||||    
T  37553110 ttttgaacactctctctagcacttactttcttattggatgaaattaatgt 37553061  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #47
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 28 - 76
Target Start/End: Original strand, 46335112 - 46335163
Alignment:
Q  28 cttttgagcactctctctagcactcac---tcttttattggatgaaatcaat 76  Q
    ||||||| |||||| ||||||||||||   ||||||||||||||||||||||    
T  46335112 cttttgaacactctttctagcactcactcttcttttattggatgaaatcaat 46335163  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #48
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 8899189 - 8899082
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||| |||||||||||  ||||||||| ||||||| | |||| | ||| |||| ||||||||  |||| ||||||||  |||  ||    
T  8899189 agcaacaatctcttttgaacactctctctaatactcactctcttattggtttaaattattgt-ggacctacactttgaaaattgaacccacacaaagggg 8899091  T
Q  117 tgggacata 125  Q
    |||||||||    
T  8899090 tgggacata 8899082  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #49
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 79
Target Start/End: Original strand, 18157055 - 18157107
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||| | ||||||||||| ||| |||| |||||||||||||||| ||||||    
T  18157055 tcttttcaacactctctctaacacccacttttttattggatgaaattaatgta 18157107  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 72
Target Start/End: Original strand, 24886063 - 24886099
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaat 72  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  24886063 cactctctctaacactcactcttttattgggtgaaat 24886099  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 25543366 - 25543406
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaat 76  Q
    ||||||||||| |||| ||||||||||| ||||||||||||    
T  25543366 cactctctctaacacttactcttttatttgatgaaatcaat 25543406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 28274803 - 28274847
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaa 71  Q
    |||||| | ||||||||||| |||||||||| |||||||||||||    
T  28274803 tcttttcaacactctctctaacactcactctcttattggatgaaa 28274847  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 42 - 78
Target Start/End: Original strand, 35336896 - 35336932
Alignment:
Q  42 ctctagcactcactcttttattggatgaaatcaatgt 78  Q
    |||||||||||| | ||||||||||||||||||||||    
T  35336896 ctctagcactcattattttattggatgaaatcaatgt 35336932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 248 - 324
Target Start/End: Original strand, 51606948 - 51607024
Alignment:
Q  248 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaa 324  Q
    |||| ||||||||||| || || |||||||||| || || ||| | |||| ||||||| |||||| |||||||||||    
T  51606948 ccatgatgggaaagttgaagcaggaccatagatatattacttttttattttgatggctgagatttgttacctgctaa 51607024  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 73; Significance: 4e-33; HSPs: 54)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 13919956 - 13919848
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| ||||||||  ||||||||||||| |||| |||    
T  13919956 agcaacactctcttttgagcactctctctagcactcactcatttattgggtgaaatcaatgtaggacctacactttgaaaatggaacccacataaagtgg 13919857  T
Q  117 tgggacata 125  Q
    |||||||||    
T  13919856 tgggacata 13919848  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 73; E-Value: 4e-33
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 26703444 - 26703552
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||| |||||||||||||||||||||||||||||||||| |||||| |||||||||| ||||||||||||||||||||||| |||| |||    
T  26703444 agcaacactctcttctgagcactctctctagcactcactcttttattgggtgaaataaatgtaggacctacactttagaaatggaacccacataaagtgg 26703543  T
Q  117 tgggacata 125  Q
    || ||||||    
T  26703544 tgagacata 26703552  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 69; E-Value: 9e-31
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 25428483 - 25428591
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||  |||||||| |||||| ||||||| |||| |||    
T  25428483 agcaacactctcttttgagcactctctttagcactcactcttttattggataaaatcaatgtaggatctacactttggaaatgtaacccacataaagtgg 25428582  T
Q  117 tgggacata 125  Q
    |||||||||    
T  25428583 tgggacata 25428591  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 14759819 - 14759711
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||| ||||||| ||||||||||||||||||||| |||||||||| |||||||| ||||| ||||| || |||| |||    
T  14759819 agcaacactctcttttgagcactctccctagcacccactcttttattggatgaaattaatgtaggacctacactttggaaatagaacctacctaaagtgg 14759720  T
Q  117 tgggacata 125  Q
    |||||||||    
T  14759719 tgggacata 14759711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 65; E-Value: 2e-28
Query Start/End: Original strand, 29 - 117
Target Start/End: Original strand, 19840901 - 19840989
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggt 117  Q
    ||||||||||||||||||||||||||||||||||||| |||||||||| |||||| |||||||| |||||||||||||| |||| ||||    
T  19840901 ttttgagcactctctctagcactcactcttttattgggtgaaatcaatataggacctacactttggaaatggaacccacataaagtggt 19840989  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 61; E-Value: 5e-26
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 45909632 - 45909524
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | ||||||||  |||||||||| |||||||||||||||||| | ||||||||||||||| |||| ||| |||||||||||||| |||| |||    
T  45909632 agcaacactctcttttgaatactctctctaacactcactcttttattgggtaaaatcaatgtaggacctacaatttggaaatggaacccacataaagtgg 45909533  T
Q  117 tgggacata 125  Q
    |||||||||    
T  45909532 tgggacata 45909524  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 49; E-Value: 8e-19
Query Start/End: Original strand, 322 - 394
Target Start/End: Complemental strand, 9045223 - 9045151
Alignment:
Q  322 taactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttcttttttgt 394  Q
    |||||||| | ||| |||||||||||||||| | ||||||||||||||||||||||||| |||||||||||||    
T  9045223 taacttttggatggcttatataaaacaaaaactatgaccccacctcataattaaataaccttttcttttttgt 9045151  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 17 - 92
Target Start/End: Original strand, 37549631 - 37549706
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacacttt 92  Q
    ||||||| | ||||||||||||| ||||||||||| ||||||||||||| |||| |||||||||||| ||||||||    
T  37549631 agcaacactctcttttgagcactttctctagcacttactcttttattggttgaattcaatgtaggacctacacttt 37549706  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 47; E-Value: 1e-17
Query Start/End: Original strand, 47 - 125
Target Start/End: Original strand, 17354561 - 17354639
Alignment:
Q  47 gcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||| ||||||||| | ||||||||||||||| |||||||| ||||| |||||||| |||| ||||||||||||    
T  17354561 gcactcacttttttattgggtaaaatcaatgtaggacctacactttggaaatagaacccacataaagtggtgggacata 17354639  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 26703603 - 26703551
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| ||||||||||||||||||||||||||| |||||||||||||    
T  26703603 tcttttgagcattctctctagcactcactcttttattgggtgaaatcaatgta 26703551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 45; E-Value: 2e-16
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 27888457 - 27888350
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||||||||||||||| |||||||||| ||||||| | |||||| ||| || | ||||||||| |||| ||||||||  ||| |||    
T  27888457 agcaacactctcttttgagcactctctctaacactcactctcttattggtttaaatcattgtgggtc-tacactttaaaaattgaacccacacaaagtgg 27888359  T
Q  117 tgggacata 125  Q
    |||||||||    
T  27888358 tgggacata 27888350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 44; E-Value: 7e-16
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 22189965 - 22190008
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||||||||||||||||||    
T  22189965 cactctctctagcactcactcttttattggatgaaatcaatgta 22190008  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 13919787 - 13919849
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | |||||||||||||||||||||||||| ||| |||||||| |||||||||||||    
T  13919787 agcaacactctcttttgagcactctctctagcactcgctcatttattgggtgaaatcaatgta 13919849  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 29 - 79
Target Start/End: Complemental strand, 17354688 - 17354638
Alignment:
Q  29 ttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||| |||||| |||||||||||||||||||||||||    
T  17354688 ttttgagcactctctctaacactcattcttttattggatgaaatcaatgta 17354638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 17 - 79
Target Start/End: Original strand, 22786158 - 22786220
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||||||||||||||||||||||| ||||||| | |||||||||||||    
T  22786158 agcaacactctcttttgagcactctctctagcactcacttttttattaggtgaaatcaatgta 22786220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 43; E-Value: 0.000000000000003
Query Start/End: Original strand, 36 - 118
Target Start/End: Complemental strand, 26459150 - 26459068
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtg 118  Q
    |||||||||||| ||||||| ||||||| | | ||| |||||| |||| ||||||||||||||||||||||| |||| |||||    
T  26459150 cactctctctagaactcacttttttattaggtaaaaacaatgtgggacctacactttagaaatggaacccacataaagtggtg 26459068  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 38 - 79
Target Start/End: Original strand, 11824099 - 11824140
Alignment:
Q  38 ctctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||||||||||||||||||||    
T  11824099 ctctctctagcactcactcttttattggatgaaatcaatgta 11824140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 48 - 125
Target Start/End: Original strand, 19494374 - 19494451
Alignment:
Q  48 cactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||  ||||||||| ||||||||||||||||  ||||||||  ||||||||||||| |||| ||||||||||||    
T  19494374 cactcacatttttattgggtgaaatcaatgtaggatctacactttgaaaatggaacccacataaagtggtgggacata 19494451  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 55 - 120
Target Start/End: Original strand, 21963172 - 21963237
Alignment:
Q  55 tcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtggg 120  Q
    ||||||||||| ||||||||||||||||  |||||||| |||||||||| ||| ||||||||||||    
T  21963172 tcttttattgggtgaaatcaatgtaggatctacactttggaaatggaactcacataaaatggtggg 21963237  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 42; E-Value: 0.00000000000001
Query Start/End: Original strand, 27 - 124
Target Start/End: Complemental strand, 26190069 - 26189972
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacat 124  Q
    |||||||| |||| |||||| |||||||||||||||||| | ||||||| ||||||| ||||||||  ||||| ||||||| | |  |||||||||||    
T  26190069 tcttttgaacactttctctaacactcactcttttattgggtaaaatcaacgtaggacctacactttgaaaatgaaacccacatgaggtggtgggacat 26189972  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 17 - 125
Target Start/End: Original strand, 24539127 - 24539235
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||  ||||||||||| |||||||||| | ||||| | |||||||||| || |||||| ||| ||||||||| |||  |||| |||    
T  24539127 agcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatggaatccatataaagtgg 24539226  T
Q  117 tgggacata 125  Q
    |||||||||    
T  24539227 tgggacata 24539235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 41; E-Value: 0.00000000000005
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 31960020 - 31959968
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||||||||  ||||||||||||||| ||||||    
T  31960020 tcttttgagcactctctctagcactcacttatttattggatgaaattaatgta 31959968  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 7775026 - 7775069
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||| |||||||||||||||||||||||||||||||||||    
T  7775026 cactctctatagcactcactcttttattggatgaaatcaatgta 7775069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 33008122 - 33008173
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| |||| |||||||||||||||||||||||||||||||||| ||||    
T  33008122 cttttgaacactatctctagcactcactcttttattggatgaaatcattgta 33008173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 40; E-Value: 0.0000000000002
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 44511090 - 44511047
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||| |||||||||||||||||||||||    
T  44511090 cactctctctagcactcacttttttattggatgaaatcaatgta 44511047  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 22786304 - 22786219
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||| ||| ||||||||||||  | |||||||||||||  || |||||||| |||||||||||||| |||| ||||| ||||||    
T  22786304 ctctcttgcaatcactcttttatcaggtgaaatcaatgtataacctacactttggaaatggaacccacataaagtggtgagacata 22786219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 38; E-Value: 0.000000000003
Query Start/End: Original strand, 19 - 79
Target Start/End: Original strand, 45909464 - 45909525
Alignment:
Q  19 caacattatcttttgagcactctctctagcactcactc-ttttattggatgaaatcaatgta 79  Q
    ||||| |||||||||||||||||| |||||| |||||| ||||||||| |||||||||||||    
T  45909464 caacactatcttttgagcactctccctagcattcactctttttattgggtgaaatcaatgta 45909525  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 17 - 125
Target Start/End: Complemental strand, 17749870 - 17749762
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatgg 116  Q
    ||||||| | |||||||  ||||||||||| |||||||||| | ||||| | |||||||||| || |||||| ||| |||||| || |||  |||| |||    
T  17749870 agcaacactctcttttggacactctctctaacactcactctctcattgggttaaatcaatgtgggtcatacattttggaaatgaaatccatataaagtgg 17749771  T
Q  117 tgggacata 125  Q
    |||||||||    
T  17749770 tgggacata 17749762  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 27 - 79
Target Start/End: Complemental strand, 19494502 - 19494450
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||| ||| ||||||| ||||||||||||||||| |||||||||||||    
T  19494502 tcttttgagtactttctctagtactcactcttttattgggtgaaatcaatgta 19494450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 37; E-Value: 0.00000000001
Query Start/End: Original strand, 307 - 387
Target Start/End: Original strand, 43469671 - 43469750
Alignment:
Q  307 agatttattacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttct 387  Q
    |||||| ||||||| ||||||||||   |||  ||| ||||||||| ||||| ||||||||||||||||||||||||||||    
T  43469671 agatttgttacctgttaactttttgactggtc-tatcaaacaaaaagtgtgatcccacctcataattaaataacattttct 43469750  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 19422988 - 19422945
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| |||||||||||| |||||||||||||||||||    
T  19422988 cactctctctatcactcactctttcattggatgaaatcaatgta 19422945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 31874061 - 31874100
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||| |||||||||||||||||||||||    
T  31874061 ctctctagcactcacttttttattggatgaaatcaatgta 31874100  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Complemental strand, 32213023 - 32212980
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||  |||||||||||||||||||||||||    
T  32213023 cactctctctagcactctatcttttattggatgaaatcaatgta 32212980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 26 - 76
Target Start/End: Original strand, 14759659 - 14759709
Alignment:
Q  26 atcttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||||| |||||| |||||||||||||||||||||  ||||||||||    
T  14759659 atcttttgagtactctccctagcactcactcttttattgagtgaaatcaat 14759709  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #35
Raw Score: 35; E-Value: 0.0000000002
Query Start/End: Original strand, 17 - 79
Target Start/End: Complemental strand, 25428652 - 25428590
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| | ||||||||||||||| | ||| ||||||||||||||||  |||||||||||||    
T  25428652 agcaacactctcttttgagcactctttttagtactcactcttttattgtgtgaaatcaatgta 25428590  T

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Target: chr7; HSP #36
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 27 - 76
Target Start/End: Complemental strand, 24539286 - 24539237
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaat 76  Q
    |||||||  ||||||||||| |||||||||||||||||||| ||||||||    
T  24539286 tcttttggacactctctctaacactcactcttttattggataaaatcaat 24539237  T

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Target: chr7; HSP #37
Raw Score: 34; E-Value: 0.0000000007
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 32205097 - 32205145
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||| |||||||||||   ||||||||||||||||||||||||||||||    
T  32205097 cttttgaacactctctcta---ctcactcttttattggatgaaatcaatgta 32205145  T

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Target: chr7; HSP #38
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 248 - 312
Target Start/End: Original strand, 14629853 - 14629916
Alignment:
Q  248 ccatcatgggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagattt 312  Q
    |||||||||||||||| |||||  ||||||||||||||| ||| | |||||||||||| ||||||    
T  14629853 ccatcatgggaaagttgaaccacaaccatagatttaatagttt-ttatttggatggctaagattt 14629916  T

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Target: chr7; HSP #39
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 36 - 76
Target Start/End: Original strand, 17749720 - 17749760
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaat 76  Q
    ||||||||||| |||||||||||||||||||| ||||||||    
T  17749720 cactctctctaacactcactcttttattggataaaatcaat 17749760  T

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Target: chr7; HSP #40
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 75
Target Start/End: Complemental strand, 31502615 - 31502579
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaa 75  Q
    |||||||| ||||||||||||||||||||||||||||    
T  31502615 tctctctaacactcactcttttattggatgaaatcaa 31502579  T

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Target: chr7; HSP #41
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 44 - 79
Target Start/End: Complemental strand, 8073434 - 8073399
Alignment:
Q  44 ctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||| ||||||||||||||||    
T  8073434 ctagcactcactcttttatcggatgaaatcaatgta 8073399  T

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Target: chr7; HSP #42
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 14795157 - 14795200
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| || ||||| |||||||||||||||||||||||    
T  14795157 cactctctctatcagtcacttttttattggatgaaatcaatgta 14795200  T

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Target: chr7; HSP #43
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 15242149 - 15242192
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| || ||||| |||||||||||||||||||||||    
T  15242149 cactctctctatcagtcacttttttattggatgaaatcaatgta 15242192  T

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Target: chr7; HSP #44
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 28 - 79
Target Start/End: Original strand, 27888300 - 27888351
Alignment:
Q  28 cttttgagcactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||| ||||||| || | ||||||| |||||||||||    
T  27888300 cttttgagcactctctctaacactcaccctctcattggataaaatcaatgta 27888351  T

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Target: chr7; HSP #45
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 36 - 75
Target Start/End: Original strand, 27949299 - 27949338
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaa 75  Q
    ||||||||||| ||||||||||| ||||||||||||||||    
T  27949299 cactctctctaacactcactcttgtattggatgaaatcaa 27949338  T

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Target: chr7; HSP #46
Raw Score: 32; E-Value: 0.00000001
Query Start/End: Original strand, 40 - 79
Target Start/End: Original strand, 46517321 - 46517360
Alignment:
Q  40 ctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||| |||||||||| |||||||||||    
T  46517321 ctctctagcactcactcatttattggataaaatcaatgta 46517360  T

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Target: chr7; HSP #47
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 45 - 79
Target Start/End: Complemental strand, 41508420 - 41508386
Alignment:
Q  45 tagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| |||||||||||||||||||||||    
T  41508420 tagcactcacttttttattggatgaaatcaatgta 41508386  T

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Target: chr7; HSP #48
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 17 - 78
Target Start/End: Complemental strand, 23934082 - 23934021
Alignment:
Q  17 agcaacattatcttttgagcactctctctagcactcactcttttattggatgaaatcaatgt 78  Q
    ||||||| | |||||| |||||| | ||||||||| ||||||||||||| | ||||||||||    
T  23934082 agcaacactctcttttaagcactttgtctagcacttactcttttattgggtaaaatcaatgt 23934021  T

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Target: chr7; HSP #49
Raw Score: 30; E-Value: 0.0000002
Query Start/End: Original strand, 36 - 125
Target Start/End: Complemental strand, 49140032 - 49139943
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    ||||||||||| | || | ||||||||||||||| |||||||||| || | ||||||| ||| | ||||||| | || |||||| |||||    
T  49140032 cactctctctaccgcttattcttttattggatgagatcaatgtagaacctgcactttaaaaaagaaacccacgttaagtggtggaacata 49139943  T

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Target: chr7; HSP #50
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 75
Target Start/End: Original strand, 2520650 - 2520698
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaa 75  Q
    |||||| | ||||||||| | |||||||||||||||||| |||||||||    
T  2520650 tcttttcaacactctctccaacactcactcttttattgggtgaaatcaa 2520698  T

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Target: chr7; HSP #51
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 51 - 79
Target Start/End: Original strand, 11692220 - 11692248
Alignment:
Q  51 tcactcttttattggatgaaatcaatgta 79  Q
    |||||||||||||||||||||||||||||    
T  11692220 tcactcttttattggatgaaatcaatgta 11692248  T

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Target: chr7; HSP #52
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 256 - 324
Target Start/End: Complemental strand, 41531625 - 41531557
Alignment:
Q  256 ggaaagttaaaccaagaccatagatttaatattttataatttggatggctcagatttattacctgctaa 324  Q
    |||||||| ||||| | |||| ||||||||| |||  ||||||||||||| |||| | |||||||||||    
T  41531625 ggaaagtttaaccacgtccatggatttaatagttttaaatttggatggctaagatcttttacctgctaa 41531557  T

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Target: chr7; HSP #53
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 36 - 72
Target Start/End: Complemental strand, 43930114 - 43930078
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaat 72  Q
    ||||||||||| |||||||||||||||||| ||||||    
T  43930114 cactctctctaacactcactcttttattgggtgaaat 43930078  T

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Target: chr7; HSP #54
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 34 - 78
Target Start/End: Original strand, 47822003 - 47822047
Alignment:
Q  34 agcactctctctagcactcactcttttattggatgaaatcaatgt 78  Q
    ||||||||||||| ||||||||||| |||||| ||||||| ||||    
T  47822003 agcactctctctaacactcactcttatattgggtgaaatccatgt 47822047  T

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Target: scaffold0099 (Bit Score: 48; Significance: 3e-18; HSPs: 1)
Name: scaffold0099
Description:

Target: scaffold0099; HSP #1
Raw Score: 48; E-Value: 3e-18
Query Start/End: Original strand, 40 - 125
Target Start/End: Complemental strand, 27468 - 27381
Alignment:
Q  40 ctctctagcactcactctttta-ttggatgaaatcaatgtaggacat-acactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||||||||||||||||| |||| ||||||||||||||||||| |||||||  |||||||||| || |||| ||||||||||||    
T  27468 ctctctagcactcactcttttaattgggtgaaatcaatgtaggacataacactttgaaaatggaacctacataaagtggtgggacata 27381  T

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Target: scaffold0543 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0543
Description:

Target: scaffold0543; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 9690 - 9733
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  9690 cactctctctaacactcacttttttattggatgaaatcaatgta 9733  T

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Target: scaffold0492 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0492
Description:

Target: scaffold0492; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 36 - 79
Target Start/End: Original strand, 11236 - 11279
Alignment:
Q  36 cactctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||| |||||||| |||||||||||||||||||||||    
T  11236 cactctctctaacactcacttttttattggatgaaatcaatgta 11279  T

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Target: scaffold0237 (Bit Score: 36; Significance: 0.00000000004; HSPs: 1)
Name: scaffold0237
Description:

Target: scaffold0237; HSP #1
Raw Score: 36; E-Value: 0.00000000004
Query Start/End: Original strand, 302 - 405
Target Start/End: Original strand, 3585 - 3686
Alignment:
Q  302 ggctcagatttattacctgctaactttttgttgggttatataaaacaaaaattgtgaccccacctcataattaaataacattttcttttttgtatgtagt 401  Q
    |||| |||||| ||||||| ||||||||||   |||  ||| |||||||||||||||||||||||||| |||||||||| ||||||  ||||| || |||    
T  3585 ggctgagatttgttacctgttaactttttgactggtc-tatcaaacaaaaattgtgaccccacctcat-attaaataaccttttctcatttgtttgaagt 3682  T
Q  402 agtg 405  Q
    ||||    
T  3683 agtg 3686  T

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Target: scaffold0838 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0838
Description:

Target: scaffold0838; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 2251 - 2291
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  2251 tctctctagcactcactcttttataagatgaaatcaatgta 2291  T

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Target: scaffold0832 (Bit Score: 33; Significance: 0.000000003; HSPs: 1)
Name: scaffold0832
Description:

Target: scaffold0832; HSP #1
Raw Score: 33; E-Value: 0.000000003
Query Start/End: Original strand, 39 - 79
Target Start/End: Original strand, 2282 - 2322
Alignment:
Q  39 tctctctagcactcactcttttattggatgaaatcaatgta 79  Q
    ||||||||||||||||||||||||  |||||||||||||||    
T  2282 tctctctagcactcactcttttataagatgaaatcaatgta 2322  T

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Target: scaffold0018 (Bit Score: 31; Significance: 0.00000004; HSPs: 1)
Name: scaffold0018
Description:

Target: scaffold0018; HSP #1
Raw Score: 31; E-Value: 0.00000004
Query Start/End: Original strand, 27 - 125
Target Start/End: Complemental strand, 27977 - 27880
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaatcaatgtaggacatacactttagaaatggaacccacttaaaatggtgggacata 125  Q
    |||||||| |||||||| ||  ||||||||| ||||||| | |||||| ||| || | |||||||| ||||| ||||||||  ||| ||||||||||||    
T  27977 tcttttgaacactctctttaatactcactctcttattggtttaaatcattgtgggtc-tacactttggaaatagaacccacacaaagtggtgggacata 27880  T

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Target: scaffold0005 (Bit Score: 29; Significance: 0.0000007; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 29; E-Value: 0.0000007
Query Start/End: Original strand, 27 - 71
Target Start/End: Original strand, 296853 - 296897
Alignment:
Q  27 tcttttgagcactctctctagcactcactcttttattggatgaaa 71  Q
    |||||| | ||||||||||| |||||||||| |||||||||||||    
T  296853 tcttttcaacactctctctaacactcactctcttattggatgaaa 296897  T

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