View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4082_high_30 (Length: 256)
Name: NF4082_high_30
Description: NF4082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4082_high_30 |
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Alignment Details
Target: chr8 (Bit Score: 217; Significance: 1e-119; HSPs: 1)
Name: chr8
Description:
Target: chr8; HSP #1
Raw Score: 217; E-Value: 1e-119
Query Start/End: Original strand, 12 - 240
Target Start/End: Complemental strand, 44233893 - 44233665
Alignment:
| Q |
12 |
acagaaatctctctaaaaacattacctcttcaataaaggggttttgttcaataaccctttgtagtccatggtcagtaacgtggatgcagttcataagagc |
111 |
Q |
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| T |
44233893 |
acagaaatctctctaaaaacattacctcttcaataaaggggttttgttcaacaaccctttgtagtccatggtcagcaacgtggatgcagttcataagagc |
44233794 |
T |
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| Q |
112 |
aagtgtttgaagcctaccatttgctttggatgtgatcttcaatagtgtgtcatctgagagtcttgaattgagagggttttcaacaataattttaagccat |
211 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |
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| T |
44233793 |
aagtgtttgaagcctaccatttgctttggatgtgatcttcaatagtgtgtcatctgagagtcttgaattgagaggggtttcaacaataattttaagccat |
44233694 |
T |
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| Q |
212 |
agcaatacatcattgttgactgcatatct |
240 |
Q |
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||||||||||||||||||||||||||||| |
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| T |
44233693 |
agcaatacatcattgttgactgcatatct |
44233665 |
T |
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