View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4082_high_38 (Length: 241)
Name: NF4082_high_38
Description: NF4082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4082_high_38 |
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Alignment Details
Target: chr2 (Bit Score: 180; Significance: 3e-97; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 180; E-Value: 3e-97
Query Start/End: Original strand, 26 - 228
Target Start/End: Complemental strand, 35802305 - 35802105
Alignment:
| Q |
26 |
aagatgatttgttagcgattttaccttaactataggacacacactaaaaccacattatttgatacactagctaacaagatgttgaggggagataacatag |
125 |
Q |
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| T |
35802305 |
aagatgatttgttagcgattttaccttaactataggacacacactaaaaccacattatttgatacactagctaacaagatgttgggggcagataacatag |
35802206 |
T |
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| Q |
126 |
aggagcgtcactcacacacatctaagttaagttaagaacaacattaatgacatttgtattgagagtgtgatatgttgtgtaaaatcatttcttgtccccc |
225 |
Q |
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|||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
35802205 |
aggagcgtca--cacacacatccaagttaagttaagaacaacattaatgacatttgtattgagagtgtgatatgttgtgtaaaatcatttcttgtccccc |
35802108 |
T |
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| Q |
226 |
ttg |
228 |
Q |
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||| |
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| T |
35802107 |
ttg |
35802105 |
T |
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