View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4082_high_45 (Length: 224)
Name: NF4082_high_45
Description: NF4082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4082_high_45 |
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| [»] chr6 (1 HSPs) |
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Alignment Details
Target: chr6 (Bit Score: 224; Significance: 1e-123; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 224; E-Value: 1e-123
Query Start/End: Original strand, 1 - 224
Target Start/End: Original strand, 21005488 - 21005711
Alignment:
| Q |
1 |
taatacatcgtacttaacgtgaattctttcaatgaagttatccccatgcgttgtatagttagaaacactaatagtgagattacaaaaccttcaaatctaa |
100 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21005488 |
taatacatcgtacttaacgtgaattctttcaatgaagttatccccatgcgttgtatagttagaaacactaatagtgagattacaaaaccttcaaatctaa |
21005587 |
T |
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| Q |
101 |
aactctcataacccctggccactaagaaaagggacattagaaatactcccacatcgacggaaaggtctattcaatacatgttgatcaaatggttgtgtga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
21005588 |
aactctcataacccctggccactaagaaaagggacattagaaatactcccacatcgacggaaaggtctattcaatacatgttgatcaaatggttgtgtga |
21005687 |
T |
|
| Q |
201 |
ataaaaacacaaacatgaatgtta |
224 |
Q |
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|||||||||||||||||||||||| |
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| T |
21005688 |
ataaaaacacaaacatgaatgtta |
21005711 |
T |
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