View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4082_low_1 (Length: 1141)

Name: NF4082_low_1
Description: NF4082
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4082_low_1
NF4082_low_1
[»] chr7 (21 HSPs)
chr7 (73-1023)||(8349834-8350786)
chr7 (310-1023)||(8480559-8481283)
chr7 (1022-1131)||(8482678-8482788)
chr7 (1022-1102)||(8355517-8355597)
chr7 (822-1023)||(8450856-8451052)
chr7 (822-1023)||(8428385-8428581)
chr7 (899-983)||(8447859-8447945)
chr7 (97-166)||(8479879-8479948)
chr7 (293-521)||(8355264-8355508)
chr7 (540-622)||(8361634-8361716)
chr7 (845-915)||(8408705-8408774)
chr7 (549-608)||(8415057-8415116)
chr7 (30-85)||(8479759-8479814)
chr7 (35-85)||(8412058-8412108)
chr7 (200-277)||(8427353-8427433)
chr7 (259-308)||(8436590-8436639)
chr7 (849-914)||(8437239-8437304)
chr7 (97-138)||(8451605-8451646)
chr7 (445-521)||(8482997-8483073)
chr7 (293-410)||(8349339-8349455)
chr7 (243-348)||(8435235-8435340)
[»] scaffold0141 (1 HSPs)
scaffold0141 (200-277)||(9240-9322)


Alignment Details
Target: chr7 (Bit Score: 790; Significance: 0; HSPs: 21)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 790; E-Value: 0
Query Start/End: Original strand, 73 - 1023
Target Start/End: Complemental strand, 8350786 - 8349834
Alignment:
Q  73 ttcatggaatgtacatgttggagggtatgatatgcaaaacttgtttgattcatatgcatttgctcaccatggttttaccatgcacgatgttaaaaggttg 172  Q
    ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8350786 ttcatggaatgtacatgttggagagtatgatatgcaaaacttgtttgattcatatgcatttgctcaccatggttttaccatgcacgatgttaaaaggttg 8350687  T
Q  173 atactaatcaatacctaaaataagtttatgcagaattctatgaactttctttttatttccaaagagatagcatgttcaatataagtgttagaaaaagttg 272  Q
    || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8350686 atgctaatcaatacctaaaataagtttatgcagaattctatgaactttctttttatttccaaagagatagcatgttcaatataagtgttagaaaaagttg 8350587  T
Q  273 aactacgtctgaccataccgacacatttgaagagaaatatcaagcatgttgtgtcataaaccacaggccgtaaatgtttcacttcctttgtcatcctaga 372  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8350586 aactacgtctgaccataccgacacatttgaagagaaatatcaatcatgttgtgtcataaaccacaggccgtaaatgtttcacttcctttgtcatcctaga 8350487  T
Q  373 atctataatctaacattggaaaaatactagaaatcacagcaattgaatatgaccttcaaattttagaacacgat-------------gagtaattctttc 459  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||             |||| ||||||||    
T  8350486 atctataatctaacattggaaaaatactagaaatcacagcaattgaatatgaccttcaaattttagaacacgataagtggatgaattgagttattctttc 8350387  T
Q  460 cagctccagctggacatcgattggagtcgatgaatgaagctccatctgccaaaccatggacaactaggactcttgaactcatttatggcataatagatct 559  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||    
T  8350386 cagctccagctggacatcgattggagtcgatgaataaagctccatctgccaaaccatggacaactagggctcttgaactcatttatggcataatagatct 8350287  T
Q  560 gctctgaacctatttagatttaattttcatgaaggctgaaataatcactgtttttgttgtcatattcaatatatgtcctactcaccacaagacattagaa 659  Q
    |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||    
T  8350286 gctctgaacctatttagatttaattttcatgaaggctgaattaatcactgtttttgttgtcatattcaatatatgtcctactctccacaagacattagaa 8350187  T
Q  660 aaatgttattttggccactgcatttgtcacagtccgtccacccaaaccagaagatttaattgaaacaagtgatgagtcaaagttaagattaaagttgaat 759  Q
    |||||||||||||||||||||||||||||||    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8350186 aaatgttattttggccactgcatttgtcaca----gtccacccaaaccagaagatttaattgaaacaagtgatgagtcaaagttaagattaaagttgaat 8350091  T
Q  760 ggcctgtaagaagttgtgatcataaaagaaactttgttcagcatgctattgttagaagcatgataagatattgagccagattaaaatgataaataca--- 856  Q
    |||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||       
T  8350090 ggccagttagaagttgtgatcataaaagaaactttgttcagcatgctattgttagaagcatgataagatattgagccggattaaaatgataaatacaatc 8349991  T
Q  857 --atcatatcatgtgtttgatgctcacataattaccaaccaaataacatcatgttgttctagttatatttttgttttgttaaacattattagttctgtta 954  Q
      |||||||||||||||||||||||||| ||||||||||||||           |||||||||||||||||| |||||||||||||||||||||||||||    
T  8349990 atatcatatcatgtgtttgatgctcacagaattaccaaccaaa-----------tgttctagttatattttt-ttttgttaaacattattagttctgtta 8349903  T
Q  955 tattttttggctcatgcctcataattacatgatggaatatgtatcataattagatagatacaaaacgtc 1023  Q
    ||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||    
T  8349902 tattttttggctcatgcctcataattaaatgatggaatatgtatcataattagatagatacaaaacgtc 8349834  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 532; E-Value: 0
Query Start/End: Original strand, 310 - 1023
Target Start/End: Original strand, 8480559 - 8481283
Alignment:
Q  310 tatcaagcatgttgtgtcataaaccacaggccgtaaatgtttcactt-----cctttgtcatcctagaatctataatctaacattggaaaaatactagaa 404  Q
    ||||||||||||||||||| |||||||| ||||||||||||||||||     ||||||||||||||||||| | |||| ||||||||||||||||| |||    
T  8480559 tatcaagcatgttgtgtcacaaaccacatgccgtaaatgtttcacttgacttcctttgtcatcctagaatcaacaatccaacattggaaaaatactcgaa 8480658  T
Q  405 atcacagcaattgaatatgaccttcaaattttagaacacgat-------------gagtaattctttccagctccagctggacatcgattggagtcgatg 491  Q
    |||| ||||||||||| |||||||||||||||||||||||||             |||| ||||||||||||||||||| ||||| ||||||||||  |     
T  8480659 atcagagcaattgaatttgaccttcaaattttagaacacgataaatcgataaattgagttattctttccagctccagctagacatagattggagtctctt 8480758  T
Q  492 aatgaagctccatctgccaaaccatggacaactaggactcttgaactcatttatggcataatagatctgctctgaacctatttagatttaattttcatga 591  Q
    ||||||||||||||||||| ||||| |||||||||| |||||||||||||||||||||||||| |||| |||||||||| ||||||||||||||||||||    
T  8480759 aatgaagctccatctgccacaccattgacaactagggctcttgaactcatttatggcataataaatctactctgaacctgtttagatttaattttcatga 8480858  T
Q  592 aggctgaaataatcactgtttttgttgtcatattcaatatatgtcctactcaccacaagacattagaaaaatgttattttggccactgcatttgtcacag 691  Q
    |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||     
T  8480859 aggctgaattaatcactgtttttgttgtcatattcaatatatgtcctactcaccacaagacattagaaaaatgttattttggccactgcatttgtcaca- 8480957  T
Q  692 tccgtccacccaaaccagaagatttaattgaaacaagtgatgagtcaaagttaagattaaagttgaatggcctgtaagaagttgtgatcataaaagaaac 791  Q
       |||||||||||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||||| ||||||||||||||||||||||||    
T  8480958 ---gtccacccaaaccagaagatttaattgaaacaagtgatgagtc--agttaagattaaagttgaatggcctgttagaagttgtgatcataaaagaaac 8481052  T
Q  792 tttgttcagcatgctattgttagaagcatgataagatattgagccagattaaaatgataaatacaatcatatcatgtgtttgatgctcacataattacca 891  Q
    ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| ||||||||||||||||| ||||||||||||||    
T  8481053 tttgttcagcatgctattgttagaagcatgataagatattgagccggattaaaatgataaatacaattatatcatgtgtttgatgttcacataattacca 8481152  T
Q  892 accaaataacatcatgttgttctagttatatttttgttttgttaaacattattagttctgttatattttttggctcatgcctcataattacatgatggaa 991  Q
    ||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8481153 accaaataacatcatgttgttctagttatattttt-ttttgttaaacattattagttctgttatattttttggctcatgcctcataattacatgatggaa 8481251  T
Q  992 tatgtatcataattagatagatacaaaacgtc 1023  Q
    ||||||||||||||||||||||||||||||||    
T  8481252 tatgtatcataattagatagatacaaaacgtc 8481283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 99; E-Value: 3e-48
Query Start/End: Original strand, 1022 - 1131
Target Start/End: Original strand, 8482678 - 8482788
Alignment:
Q  1022 tctcttctatttaggaacatcccaaaagttgttcataacaaactcact-atctttccagactagtggtggcgatctggaacattggaaatactttgtact 1120  Q
    |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||    
T  8482678 tctcttctatttaggaacatcccaaaagttgttcataacaaactcacttatctttccagactagtggtggtgatctggaacattggaaatactttgtact 8482777  T
Q  1121 tatgatgatgt 1131  Q
    |||||||||||    
T  8482778 tatgatgatgt 8482788  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 81; E-Value: 2e-37
Query Start/End: Original strand, 1022 - 1102
Target Start/End: Complemental strand, 8355597 - 8355517
Alignment:
Q  1022 tctcttctatttaggaacatcccaaaagttgttcataacaaactcactatctttccagactagtggtggcgatctggaaca 1102  Q
    |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  8355597 tctcttctatttaggaacatcccaaaagttgttcataacaaactcactatctttccagactagtggtggcgatctggaaca 8355517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 80; E-Value: 6e-37
Query Start/End: Original strand, 822 - 1023
Target Start/End: Complemental strand, 8451052 - 8450856
Alignment:
Q  822 ataagatattgagccagattaaaatgataaatacaatcatatcatgtgtttgatgctcacataattaccaaccaaataacatcatgttgttctagttata 921  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| ||||| |||||||||| |  | |||||||||||||| ||||||||||| |||||    
T  8451052 ataagatattgagccggataaaaataataaatacaatcatatcatatgtttaatgctcacatga-caacaaccaaataacattatgttgttcta-ttata 8450955  T
Q  922 tttttgttttgttaaacattattagttctgttatattttttggctcatgcctcataattacatgatggaatatgtatcataattagatagatacaaaacg 1021  Q
     ||   |||  ||||| || ||| ||||| |||||||||||||  ||||| | |||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  8450954 ctt---tttccttaaatatgatttgttctattatattttttggtacatgcatgataattacatgatgaaatatgtattatatttagatagatacaaaacg 8450858  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 72; E-Value: 4e-32
Query Start/End: Original strand, 822 - 1023
Target Start/End: Original strand, 8428385 - 8428581
Alignment:
Q  822 ataagatattgagccagattaaaatgataaatacaatcatatcatgtgtttgatgctcacataattaccaaccaaataacatcatgttgttctagttata 921  Q
    ||||||||||||||| ||| ||||| ||||||||||||||||||| ||||| |||||||||| |  | |||||||||||||| ||||||||||| |||||    
T  8428385 ataagatattgagccggataaaaataataaatacaatcatatcatatgtttaatgctcacatga-caacaaccaaataacattatgttgttcta-ttata 8428482  T
Q  922 tttttgttttgttaaacattattagttctgttatattttttggctcatgcctcataattacatgatggaatatgtatcataattagatagatacaaaacg 1021  Q
     ||   |||  ||||| || ||| ||||| | |||| ||||||  ||||| | |||||||||||||| ||||||||| ||| ||||||||||||||||||    
T  8428483 ctt---tttccttaaatatgatttgttctatcatatgttttggtacatgcatgataattacatgatgaaatatgtattatatttagatagatacaaaacg 8428579  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 48; E-Value: 7e-18
Query Start/End: Original strand, 899 - 983
Target Start/End: Complemental strand, 8447945 - 8447859
Alignment:
Q  899 aacatcatgttgttctagttatatttttgttttgttaaacattattagttctgttatatt--ttttggctcatgcctcataattaca 983  Q
    ||||| || |||||||| |||||||||| ||| || |||||||||||||| |||||||||  |||||||||||||||||||||||||    
T  8447945 aacattattttgttctaattatatttttttttggtaaaacattattagttatgttatattttttttggctcatgcctcataattaca 8447859  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 46; E-Value: 1e-16
Query Start/End: Original strand, 97 - 166
Target Start/End: Original strand, 8479879 - 8479948
Alignment:
Q  97 gtatgatatgcaaaacttgtttgattcatatgcatttgctcaccatggttttaccatgcacgatgttaaa 166  Q
    ||||||||||||| ||||||||||||||||||||||||||||||||  |||| |||||||  ||||||||    
T  8479879 gtatgatatgcaacacttgtttgattcatatgcatttgctcaccattattttgccatgcataatgttaaa 8479948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 293 - 521
Target Start/End: Complemental strand, 8355508 - 8355264
Alignment:
Q  293 acacatttgaagagaaatatcaagcatgttgtgtcataaacc-acaggccgtaaatgtttcacttcctttgtcatcctagaatctataatctaacattgg 391  Q
    ||||||||||||||||| ||||| | ||  |||| | ||||| |||||| |  |||||||||||  |||||||||| |||||||||  ||| ||||||||    
T  8355508 acacatttgaagagaaagatcaatcctgcggtgttacaaacccacaggctgggaatgtttcactgtctttgtcatcttagaatcta--atccaacattgg 8355411  T
Q  392 aaaaatactagaaatcacagcaattgaatatg---------accttcaaattttagaacac--------gatgagtaattctttccagctccagctggac 474  Q
    ||| ||| | |||||||||  ||||||||| |         ||| |||||||||||||||         ||| ||| ||||||||||||||||| | |||    
T  8355410 aaacatattggaaatcacataaattgaataagttaatcgaaaccctcaaattttagaacataataattggataagttattctttccagctccaggtagac 8355311  T
Q  475 atcgattggagtcgatgaatgaagctccatctgccaaaccatggaca 521  Q
    ||||||||||| || |||||| | |||||||||||| ||||||||||    
T  8355310 atcgattggagacgctgaatgcatctccatctgccacaccatggaca 8355264  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 540 - 622
Target Start/End: Complemental strand, 8361716 - 8361634
Alignment:
Q  540 atttatggcataatagatctgctctgaacctatttagatttaattttcatgaaggctgaaataatcactgtttttgttgtcat 622  Q
    |||| |||||||||| ||||||||||||||||||| |||| ||||||||| | |||| ||| |||||||| |||| |||||||    
T  8361716 atttttggcataatatatctgctctgaacctattttgattcaattttcattatggctaaaacaatcactgattttattgtcat 8361634  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 43; E-Value: 0.000000000000007
Query Start/End: Original strand, 845 - 915
Target Start/End: Complemental strand, 8408774 - 8408705
Alignment:
Q  845 atgataaatacaatcatatcatgtgtttgatgctcacataattaccaaccaaataacatcatgttgttcta 915  Q
    |||||||||||||||||||||| |||||||||||||| |||| ||||||||||||| || || ||||||||    
T  8408774 atgataaatacaatcatatcat-tgtttgatgctcacgtaataaccaaccaaataatattattttgttcta 8408705  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 549 - 608
Target Start/End: Complemental strand, 8415116 - 8415057
Alignment:
Q  549 ataatagatctgctctgaacctatttagatttaattttcatgaaggctgaaataatcact 608  Q
    |||||| ||||||||||||||||||||||||  |||||||||| |||||||| |||||||    
T  8415116 ataatatatctgctctgaacctatttagattcgattttcatgatggctgaaacaatcact 8415057  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 40; E-Value: 0.0000000000004
Query Start/End: Original strand, 30 - 85
Target Start/End: Original strand, 8479759 - 8479814
Alignment:
Q  30 tataaaaactgtttgacaaaaggcatgaaagaaggagcaaggtttcatggaatgta 85  Q
    |||| |||||||||||||||  ||| ||||||||||||||||||||||||||||||    
T  8479759 tatagaaactgtttgacaaactgcacgaaagaaggagcaaggtttcatggaatgta 8479814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 35 - 85
Target Start/End: Complemental strand, 8412108 - 8412058
Alignment:
Q  35 aaactgtttgacaaaaggcatgaaagaaggagcaaggtttcatggaatgta 85  Q
    |||||||||||||||| || ||||||||||| |||||||||||||||||||    
T  8412108 aaactgtttgacaaaaagcgtgaaagaaggatcaaggtttcatggaatgta 8412058  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 39; E-Value: 0.000000000002
Query Start/End: Original strand, 200 - 277
Target Start/End: Original strand, 8427353 - 8427433
Alignment:
Q  200 atgcagaattctatgaactttctttttat---ttccaaagagatagcatgttcaatataagtgttagaaaaagttgaacta 277  Q
    ||||||||||||||||||||| ||||| |   ||| ||||||||||||||||||   |||||||||||||| |||||||||    
T  8427353 atgcagaattctatgaactttttttttttattttctaaagagatagcatgttcagagtaagtgttagaaaatgttgaacta 8427433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 259 - 308
Target Start/End: Complemental strand, 8436639 - 8436590
Alignment:
Q  259 gttagaaaaagttgaactacgtctgaccataccgacacatttgaagagaa 308  Q
    ||||||||||||||||||| ||||||||||||||||||||  ||||||||    
T  8436639 gttagaaaaagttgaactatgtctgaccataccgacacatccgaagagaa 8436590  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 849 - 914
Target Start/End: Complemental strand, 8437304 - 8437239
Alignment:
Q  849 taaatacaatcatatcatgtgtttgatgctcacataattaccaaccaaataacatcatgttgttct 914  Q
    |||||| ||||||||||| |||||||| ||||||| || |||||||||||||||| || |||||||    
T  8437304 taaataaaatcatatcatatgtttgatactcacatgataaccaaccaaataacattattttgttct 8437239  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 97 - 138
Target Start/End: Complemental strand, 8451646 - 8451605
Alignment:
Q  97 gtatgatatgcaaaacttgtttgattcatatgcatttgctca 138  Q
    ||||||||||||| ||||||||||||||||||||||||||||    
T  8451646 gtatgatatgcaacacttgtttgattcatatgcatttgctca 8451605  T

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Target: chr7; HSP #19
Raw Score: 37; E-Value: 0.00000000003
Query Start/End: Original strand, 445 - 521
Target Start/End: Original strand, 8482997 - 8483073
Alignment:
Q  445 atgagtaattctttccagctccagctggacatcgattggagtcgatgaatgaagctccatctgccaaaccatggaca 521  Q
    |||||| ||||||||||||||| | | ||||||||||||||||| |||||| | |||  ||||||| ||||||||||    
T  8482997 atgagttattctttccagctccgggtagacatcgattggagtcggtgaatgcatctctctctgccacaccatggaca 8483073  T

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Target: chr7; HSP #20
Raw Score: 32; E-Value: 0.00000003
Query Start/End: Original strand, 293 - 410
Target Start/End: Complemental strand, 8349455 - 8349339
Alignment:
Q  293 acacatttgaagagaaatatcaagcatgttgtgtcataaacc-acaggccgtaaatgtttcacttcctttgtcatcctagaatctataatctaacattgg 391  Q
    ||||||||||||||||| ||||| | ||  |||| | ||||| |||||| |  |||||||||||  |||||||||| ||| |||||  ||| ||||||||    
T  8349455 acacatttgaagagaaagatcaatcctgcggtgttacaaacccacaggctgggaatgtttcactgtctttgtcatcttagtatcta--atccaacattgg 8349358  T
Q  392 aaaaatactagaaatcaca 410  Q
    ||||||| | |||||||||    
T  8349357 aaaaatattggaaatcaca 8349339  T

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Target: chr7; HSP #21
Raw Score: 30; E-Value: 0.0000004
Query Start/End: Original strand, 243 - 348
Target Start/End: Complemental strand, 8435340 - 8435235
Alignment:
Q  243 catgttcaatataagtgttagaaaaagttgaactacgtctgaccataccgacacatttgaagagaaatatcaagcatgttgtgtcataaaccacaggccg 342  Q
    ||||| ||| ||||| | |||||| ||||||||||  |  |||| |||||||||||||||||||| | ||||||   ||| ||||| |||||| ||||||    
T  8435340 catgtccaaaataagagatagaaatagttgaactatatgagaccgtaccgacacatttgaagagacagatcaagacggttttgtcacaaaccaaaggccg 8435241  T
Q  343 taaatg 348  Q
     |||||    
T  8435240 aaaatg 8435235  T

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Target: scaffold0141 (Bit Score: 38; Significance: 0.000000000007; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 38; E-Value: 0.000000000007
Query Start/End: Original strand, 200 - 277
Target Start/End: Complemental strand, 9322 - 9240
Alignment:
Q  200 atgcagaattctatgaactttcttttt--atttccaa---agagatagcatgttcaatataagtgttagaaaaagttgaacta 277  Q
    ||||||||||||||||||||| |||||  ||||| ||   ||||||||||||||||   ||||||||||||||||||||||||    
T  9322 atgcagaattctatgaactttttttttttatttctaataaagagatagcatgttcagagtaagtgttagaaaaagttgaacta 9240  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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