View Alignment

This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.

Legend
 Query
 Query hiting target  Query hiting target's complemental strand
 Query's complemental strand hiting target  Query's complemental strand hiting target's complemental strand

Alignment Overview

Query: NF4084_low_10 (Length: 217)

Name: NF4084_low_10
Description: NF4084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)


[»] NF4084_low_10
NF4084_low_10
[»] chr8 (36 HSPs)
chr8 (1-217)||(5866155-5866371)
chr8 (1-217)||(17140940-17141156)
chr8 (1-217)||(21491019-21491235)
chr8 (1-217)||(21249408-21249624)
chr8 (1-217)||(21255246-21255462)
chr8 (1-217)||(26355578-26355795)
chr8 (10-217)||(38855139-38855348)
chr8 (1-217)||(6520392-6520610)
chr8 (9-217)||(20498586-20498798)
chr8 (1-217)||(23760719-23760941)
chr8 (76-217)||(21285621-21285765)
chr8 (142-214)||(17612132-17612204)
chr8 (57-216)||(17439439-17439603)
chr8 (76-217)||(21673728-21673871)
chr8 (9-217)||(37116371-37116584)
chr8 (170-217)||(17267044-17267091)
chr8 (140-214)||(13508105-13508179)
chr8 (140-214)||(13597637-13597711)
chr8 (65-217)||(983347-983503)
chr8 (169-217)||(19154936-19154984)
chr8 (170-217)||(24353044-24353091)
chr8 (169-217)||(21396029-21396077)
chr8 (169-217)||(21790522-21790570)
chr8 (126-217)||(22626760-22626850)
chr8 (169-217)||(21389499-21389547)
chr8 (169-217)||(21778825-21778873)
chr8 (170-217)||(22525582-22525628)
chr8 (163-217)||(16199687-16199741)
chr8 (143-217)||(31971281-31971354)
chr8 (164-217)||(7372802-7372854)
chr8 (164-217)||(18818454-18818506)
chr8 (164-217)||(18879276-18879328)
chr8 (164-217)||(21919045-21919097)
chr8 (164-217)||(23406403-23406455)
chr8 (173-217)||(28397574-28397617)
chr8 (169-217)||(28649094-28649141)
[»] chr7 (34 HSPs)
chr7 (1-217)||(28505179-28505395)
chr7 (1-217)||(34200810-34201026)
chr7 (1-217)||(11995908-11996124)
chr7 (1-214)||(15754767-15754981)
chr7 (73-217)||(16495426-16495570)
chr7 (1-217)||(44014202-44014417)
chr7 (1-217)||(16219595-16219814)
chr7 (1-217)||(67769-67987)
chr7 (1-217)||(18005670-18005889)
chr7 (9-217)||(12901347-12901559)
chr7 (126-217)||(2280125-2280216)
chr7 (9-217)||(20220075-20220285)
chr7 (76-217)||(811084-811228)
chr7 (76-217)||(47831831-47831975)
chr7 (76-217)||(16056352-16056495)
chr7 (76-210)||(22072944-22073083)
chr7 (143-215)||(48991206-48991280)
chr7 (169-217)||(1868044-1868092)
chr7 (169-217)||(15008548-15008596)
chr7 (142-217)||(19486766-19486841)
chr7 (140-214)||(10063838-10063912)
chr7 (9-103)||(15113084-15113178)
chr7 (9-103)||(15116621-15116715)
chr7 (57-217)||(14044770-14044935)
chr7 (57-217)||(14354800-14354965)
chr7 (170-213)||(14036282-14036325)
chr7 (170-213)||(14346312-14346355)
chr7 (164-214)||(12255837-12255887)
chr7 (164-217)||(16386292-16386345)
chr7 (164-217)||(13647349-13647401)
chr7 (170-215)||(18203838-18203882)
chr7 (143-217)||(38227505-38227578)
chr7 (164-217)||(3564409-3564461)
chr7 (164-217)||(12698855-12698907)
[»] chr5 (23 HSPs)
chr5 (1-217)||(19660716-19660932)
chr5 (1-217)||(22959413-22959629)
chr5 (1-217)||(19668922-19669140)
chr5 (1-217)||(21565566-21565785)
chr5 (8-217)||(21502040-21502253)
chr5 (78-217)||(26011990-26012132)
chr5 (9-217)||(21329383-21329594)
chr5 (9-217)||(20026826-20027038)
chr5 (140-217)||(36314601-36314678)
chr5 (169-217)||(22178270-22178318)
chr5 (73-120)||(36314672-36314719)
chr5 (142-217)||(40725877-40725952)
chr5 (143-217)||(22144073-22144147)
chr5 (171-217)||(26732884-26732929)
chr5 (164-217)||(24529244-24529296)
chr5 (164-217)||(25421556-25421608)
chr5 (171-217)||(26740697-26740742)
chr5 (164-217)||(8286888-8286940)
chr5 (164-217)||(21729109-21729161)
chr5 (164-217)||(21808434-21808486)
chr5 (164-217)||(21997579-21997631)
chr5 (188-217)||(27988997-27989026)
chr5 (169-214)||(37723930-37723975)
[»] scaffold0046 (3 HSPs)
scaffold0046 (9-217)||(2021-2229)
scaffold0046 (1-217)||(11316-11532)
scaffold0046 (164-217)||(28438-28490)
[»] chr2 (27 HSPs)
chr2 (20-216)||(23071849-23072045)
chr2 (1-211)||(25175880-25176093)
chr2 (78-214)||(7679612-7679750)
chr2 (76-217)||(28406000-28406144)
chr2 (140-214)||(19671857-19671931)
chr2 (9-211)||(7618-7824)
chr2 (1-217)||(22134095-22134303)
chr2 (9-103)||(22459447-22459541)
chr2 (9-217)||(18786788-18787000)
chr2 (169-217)||(22413187-22413235)
chr2 (169-217)||(23207301-23207349)
chr2 (9-217)||(23791297-23791510)
chr2 (170-217)||(25108911-25108958)
chr2 (170-217)||(20520243-20520290)
chr2 (170-217)||(23004772-23004819)
chr2 (164-217)||(298859-298912)
chr2 (58-217)||(23708553-23708716)
chr2 (170-217)||(23287387-23287433)
chr2 (170-217)||(24697657-24697704)
chr2 (143-217)||(38138-38211)
chr2 (171-217)||(26392406-26392451)
chr2 (164-217)||(22105433-22105485)
chr2 (169-217)||(20309132-20309180)
chr2 (163-217)||(23103439-23103492)
chr2 (164-217)||(23060537-23060589)
chr2 (164-217)||(23076466-23076518)
chr2 (164-217)||(23285889-23285941)
[»] scaffold0261 (1 HSPs)
scaffold0261 (1-217)||(15685-15901)
[»] scaffold0175 (1 HSPs)
scaffold0175 (1-217)||(34147-34363)
[»] chr1 (29 HSPs)
chr1 (1-217)||(20918628-20918844)
chr1 (1-217)||(20248303-20248518)
chr1 (73-217)||(14295504-14295648)
chr1 (1-217)||(52927860-52928067)
chr1 (1-217)||(33681031-33681250)
chr1 (56-188)||(22130843-22130975)
chr1 (1-217)||(22237651-22237871)
chr1 (73-173)||(51130632-51130732)
chr1 (1-217)||(21754069-21754278)
chr1 (1-217)||(22921747-22921966)
chr1 (9-217)||(21861455-21861667)
chr1 (9-217)||(21896144-21896353)
chr1 (66-217)||(35261023-35261175)
chr1 (170-217)||(50614167-50614214)
chr1 (170-217)||(50621995-50622042)
chr1 (138-217)||(16758673-16758754)
chr1 (172-217)||(16368338-16368383)
chr1 (1-117)||(20636975-20637091)
chr1 (169-217)||(41050085-41050133)
chr1 (170-213)||(26064966-26065009)
chr1 (165-215)||(38801433-38801483)
chr1 (171-217)||(50686635-50686681)
chr1 (164-217)||(45574932-45574984)
chr1 (169-217)||(16093934-16093982)
chr1 (170-217)||(21533923-21533969)
chr1 (64-102)||(49261481-49261519)
chr1 (164-217)||(34509804-34509856)
chr1 (164-217)||(50210258-50210310)
chr1 (139-215)||(21161742-21161817)
[»] chr6 (30 HSPs)
chr6 (9-217)||(28496360-28496568)
chr6 (9-217)||(29808771-29808979)
chr6 (1-214)||(1561330-1561544)
chr6 (1-217)||(19652219-19652436)
chr6 (1-217)||(23019430-23019649)
chr6 (9-217)||(19668395-19668607)
chr6 (9-217)||(20109162-20109376)
chr6 (140-217)||(27333238-27333315)
chr6 (140-217)||(27393978-27394055)
chr6 (170-217)||(23076754-23076801)
chr6 (170-217)||(35008172-35008219)
chr6 (76-217)||(9098466-9098611)
chr6 (139-217)||(4185840-4185918)
chr6 (169-217)||(35245610-35245658)
chr6 (142-217)||(8227533-8227608)
chr6 (164-217)||(25644344-25644397)
chr6 (169-217)||(33443071-33443118)
chr6 (139-217)||(4186391-4186469)
chr6 (169-217)||(16920679-16920727)
chr6 (173-217)||(22831527-22831571)
chr6 (178-217)||(11185529-11185568)
chr6 (139-182)||(22080757-22080800)
chr6 (143-217)||(19303564-19303637)
chr6 (143-217)||(20076724-20076797)
chr6 (9-111)||(35008283-35008385)
chr6 (164-217)||(16496268-16496320)
chr6 (164-213)||(20638328-20638376)
chr6 (164-217)||(29060564-29060616)
chr6 (139-183)||(4668230-4668274)
chr6 (139-183)||(4675077-4675121)
[»] chr4 (24 HSPs)
chr4 (1-203)||(16596686-16596888)
chr4 (1-217)||(15551841-15552056)
chr4 (9-217)||(13736-13948)
chr4 (1-217)||(12774031-12774240)
chr4 (9-126)||(8846490-8846607)
chr4 (9-217)||(12288095-12288307)
chr4 (1-217)||(43198430-43198652)
chr4 (13-217)||(39706179-39706385)
chr4 (139-217)||(8846380-8846458)
chr4 (164-217)||(52243240-52243293)
chr4 (169-217)||(46640505-46640553)
chr4 (170-217)||(53082202-53082249)
chr4 (169-217)||(17046511-17046559)
chr4 (64-107)||(15099485-15099528)
chr4 (64-107)||(15190452-15190495)
chr4 (163-217)||(16377565-16377618)
chr4 (164-217)||(3096317-3096369)
chr4 (172-217)||(6190486-6190531)
chr4 (164-217)||(7088901-7088953)
chr4 (164-217)||(7798798-7798850)
chr4 (164-217)||(12902781-12902833)
chr4 (164-217)||(52873412-52873464)
chr4 (163-215)||(14053344-14053396)
chr4 (170-214)||(17333304-17333347)
[»] scaffold0161 (1 HSPs)
scaffold0161 (1-186)||(2323-2508)
[»] scaffold0218 (2 HSPs)
scaffold0218 (1-192)||(29158-29352)
scaffold0218 (9-217)||(7962-8171)
[»] scaffold0556 (2 HSPs)
scaffold0556 (1-217)||(6836-7052)
scaffold0556 (10-119)||(8140-8249)
[»] chr3 (33 HSPs)
chr3 (1-217)||(13210207-13210424)
chr3 (13-217)||(12174152-12174356)
chr3 (9-217)||(16097352-16097563)
chr3 (1-217)||(16103804-16104022)
chr3 (1-217)||(32307701-32307910)
chr3 (1-217)||(9512944-9513150)
chr3 (1-217)||(9520919-9521125)
chr3 (1-126)||(49389508-49389633)
chr3 (1-217)||(15470948-15471166)
chr3 (1-188)||(1644562-1644742)
chr3 (1-217)||(49667963-49668173)
chr3 (76-211)||(14234517-14234655)
chr3 (9-217)||(37251053-37251265)
chr3 (66-217)||(52523669-52523826)
chr3 (1-79)||(12934190-12934268)
chr3 (140-214)||(23274714-23274788)
chr3 (140-214)||(24340743-24340817)
chr3 (170-217)||(22110402-22110449)
chr3 (142-217)||(37642287-37642362)
chr3 (170-217)||(43925982-43926029)
chr3 (172-217)||(606378-606423)
chr3 (169-217)||(12377945-12377993)
chr3 (151-217)||(27165271-27165337)
chr3 (143-217)||(53301574-53301648)
chr3 (164-217)||(26686911-26686963)
chr3 (64-107)||(1465352-1465395)
chr3 (170-217)||(13919353-13919399)
chr3 (142-217)||(22147547-22147622)
chr3 (143-217)||(14572613-14572686)
chr3 (164-217)||(12399233-12399285)
chr3 (164-217)||(20698480-20698532)
chr3 (176-217)||(28194714-28194755)
chr3 (164-217)||(43840956-43841008)
[»] scaffold0184 (1 HSPs)
scaffold0184 (73-217)||(1022-1166)
[»] scaffold0555 (1 HSPs)
scaffold0555 (1-217)||(10419-10638)
[»] scaffold0125 (1 HSPs)
scaffold0125 (1-217)||(45670-45889)
[»] scaffold0010 (2 HSPs)
scaffold0010 (1-217)||(129929-130148)
scaffold0010 (164-217)||(60760-60813)
[»] scaffold1984 (1 HSPs)
scaffold1984 (1-217)||(153-371)
[»] scaffold0001 (2 HSPs)
scaffold0001 (1-217)||(160708-160926)
scaffold0001 (172-217)||(497450-497494)
[»] scaffold0037 (1 HSPs)
scaffold0037 (1-217)||(22552-22767)
[»] scaffold1765 (1 HSPs)
scaffold1765 (9-217)||(1106-1317)
[»] scaffold0075 (1 HSPs)
scaffold0075 (9-211)||(53434-53640)
[»] scaffold0028 (2 HSPs)
scaffold0028 (1-217)||(62222-62438)
scaffold0028 (1-217)||(132682-132894)
[»] scaffold0476 (1 HSPs)
scaffold0476 (1-217)||(12790-13009)
[»] scaffold0621 (2 HSPs)
scaffold0621 (9-217)||(8490-8704)
scaffold0621 (1-217)||(6559-6777)
[»] scaffold0243 (1 HSPs)
scaffold0243 (1-217)||(6001-6220)
[»] scaffold0023 (4 HSPs)
scaffold0023 (1-217)||(100398-100617)
scaffold0023 (1-214)||(40052-40268)
scaffold0023 (159-217)||(101523-101581)
scaffold0023 (168-217)||(119899-119948)
[»] scaffold0034 (1 HSPs)
scaffold0034 (9-217)||(32560-32770)
[»] scaffold0102 (1 HSPs)
scaffold0102 (1-217)||(19288-19507)
[»] scaffold0150 (1 HSPs)
scaffold0150 (1-217)||(32122-32334)
[»] scaffold0078 (1 HSPs)
scaffold0078 (9-217)||(10551-10762)
[»] scaffold0333 (2 HSPs)
scaffold0333 (76-217)||(6635-6779)
scaffold0333 (76-217)||(14015-14159)
[»] scaffold0413 (1 HSPs)
scaffold0413 (9-217)||(12592-12803)
[»] scaffold0278 (1 HSPs)
scaffold0278 (1-217)||(5667-5885)
[»] scaffold0530 (1 HSPs)
scaffold0530 (76-217)||(987-1131)
[»] scaffold0357 (3 HSPs)
scaffold0357 (126-217)||(13152-13243)
scaffold0357 (126-217)||(16106-16197)
scaffold0357 (170-217)||(2685-2732)
[»] scaffold0165 (1 HSPs)
scaffold0165 (126-217)||(27755-27846)
[»] scaffold0211 (2 HSPs)
scaffold0211 (1-87)||(28689-28775)
scaffold0211 (164-217)||(28813-28867)
[»] scaffold0207 (1 HSPs)
scaffold0207 (1-217)||(2523-2742)
[»] scaffold0020 (1 HSPs)
scaffold0020 (139-217)||(15796-15874)
[»] scaffold0008 (1 HSPs)
scaffold0008 (1-217)||(14575-14794)
[»] scaffold0138 (1 HSPs)
scaffold0138 (76-217)||(12963-13107)
[»] scaffold0021 (4 HSPs)
scaffold0021 (9-217)||(136253-136466)
scaffold0021 (9-217)||(144961-145174)
scaffold0021 (169-217)||(174790-174838)
scaffold0021 (171-217)||(121790-121835)
[»] scaffold0461 (1 HSPs)
scaffold0461 (142-214)||(11491-11563)
[»] scaffold0124 (1 HSPs)
scaffold0124 (142-214)||(38278-38350)
[»] scaffold0100 (1 HSPs)
scaffold0100 (139-217)||(23902-23980)
[»] scaffold2014 (1 HSPs)
scaffold2014 (138-217)||(1056-1135)
[»] scaffold0628 (1 HSPs)
scaffold0628 (126-217)||(2812-2903)
[»] scaffold0507 (1 HSPs)
scaffold0507 (9-217)||(7944-8158)
[»] scaffold0123 (1 HSPs)
scaffold0123 (169-217)||(25130-25178)
[»] scaffold1257 (1 HSPs)
scaffold1257 (1-185)||(2096-2283)
[»] scaffold0247 (1 HSPs)
scaffold0247 (140-214)||(18047-18121)
[»] scaffold1403 (1 HSPs)
scaffold1403 (172-217)||(574-619)
[»] scaffold0022 (2 HSPs)
scaffold0022 (172-217)||(78346-78391)
scaffold0022 (9-217)||(128855-129067)
[»] scaffold0139 (1 HSPs)
scaffold0139 (169-217)||(38340-38388)
[»] scaffold0106 (2 HSPs)
scaffold0106 (169-217)||(7290-7338)
scaffold0106 (171-217)||(1313-1359)
[»] scaffold0080 (1 HSPs)
scaffold0080 (169-217)||(19934-19982)
[»] scaffold0040 (1 HSPs)
scaffold0040 (9-217)||(103524-103728)
[»] scaffold1137 (1 HSPs)
scaffold1137 (1-87)||(2181-2267)
[»] scaffold0420 (2 HSPs)
scaffold0420 (175-217)||(13793-13835)
scaffold0420 (169-217)||(6333-6381)
[»] scaffold0141 (1 HSPs)
scaffold0141 (143-217)||(39501-39574)
[»] scaffold0049 (1 HSPs)
scaffold0049 (143-217)||(75238-75311)
[»] scaffold0598 (1 HSPs)
scaffold0598 (169-217)||(1098-1146)
[»] scaffold0456 (1 HSPs)
scaffold0456 (169-217)||(10472-10520)
[»] scaffold0090 (1 HSPs)
scaffold0090 (169-217)||(2699-2747)
[»] scaffold0032 (1 HSPs)
scaffold0032 (169-217)||(51606-51654)
[»] scaffold0006 (2 HSPs)
scaffold0006 (9-213)||(97033-97242)
scaffold0006 (9-213)||(106311-106520)
[»] scaffold0005 (1 HSPs)
scaffold0005 (169-217)||(267684-267732)
[»] scaffold0003 (1 HSPs)
scaffold0003 (143-217)||(339972-340044)
[»] scaffold0540 (1 HSPs)
scaffold0540 (143-217)||(3174-3247)
[»] scaffold0120 (3 HSPs)
scaffold0120 (143-217)||(32980-33053)
scaffold0120 (143-217)||(45952-46025)
scaffold0120 (164-217)||(16137-16189)
[»] scaffold0074 (1 HSPs)
scaffold0074 (143-213)||(38725-38795)
[»] scaffold0064 (1 HSPs)
scaffold0064 (171-217)||(47019-47065)
[»] scaffold1842 (1 HSPs)
scaffold1842 (164-217)||(1093-1145)
[»] scaffold0358 (1 HSPs)
scaffold0358 (164-217)||(4736-4788)
[»] scaffold0014 (1 HSPs)
scaffold0014 (170-215)||(206575-206619)
[»] scaffold0011 (1 HSPs)
scaffold0011 (164-217)||(168023-168075)
[»] scaffold0908 (1 HSPs)
scaffold0908 (126-217)||(3192-3283)
[»] scaffold0351 (1 HSPs)
scaffold0351 (169-217)||(16306-16354)
[»] scaffold0718 (1 HSPs)
scaffold0718 (175-217)||(5183-5225)
[»] scaffold0427 (1 HSPs)
scaffold0427 (143-217)||(13521-13594)
[»] scaffold2080 (1 HSPs)
scaffold2080 (172-217)||(813-857)
[»] scaffold0490 (1 HSPs)
scaffold0490 (164-217)||(1976-2028)
[»] scaffold0292 (1 HSPs)
scaffold0292 (164-217)||(367-419)
[»] scaffold0235 (1 HSPs)
scaffold0235 (164-217)||(11488-11540)
[»] scaffold0122 (1 HSPs)
scaffold0122 (164-217)||(26110-26162)
[»] scaffold0107 (1 HSPs)
scaffold0107 (172-217)||(36204-36248)
[»] scaffold0088 (1 HSPs)
scaffold0088 (164-217)||(20934-20987)
[»] scaffold0056 (1 HSPs)
scaffold0056 (164-217)||(17262-17314)
[»] scaffold0042 (1 HSPs)
scaffold0042 (164-217)||(24348-24400)
[»] scaffold0737 (1 HSPs)
scaffold0737 (169-217)||(1847-1895)
[»] scaffold0647 (1 HSPs)
scaffold0647 (164-217)||(6166-6221)
[»] scaffold0475 (1 HSPs)
scaffold0475 (139-183)||(9136-9180)
[»] scaffold0070 (1 HSPs)
scaffold0070 (165-217)||(4548-4599)
[»] scaffold0016 (1 HSPs)
scaffold0016 (73-125)||(207470-207522)


Alignment Details
Target: chr8 (Bit Score: 189; Significance: 1e-102; HSPs: 36)
Name: chr8
Description:

Target: chr8; HSP #1
Raw Score: 189; E-Value: 1e-102
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 5866155 - 5866371
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  5866155 gaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 5866254  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||    
T  5866255 tacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaact 5866354  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  5866355 aagctgcatgagtcggt 5866371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #2
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 17141156 - 17140940
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  17141156 gaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 17141057  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||| ||||||||||||||| |||| |||| ||||||||||||||||||| ||||||||  ||||||    
T  17141056 tacatgacttaagtttgataattgagttgatgatttacattcgatattattatgtcatgatggattgcatactgcctatgttgctgtttgttatttaact 17140957  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  17140956 aagctgcatgagtcggt 17140940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #3
Raw Score: 181; E-Value: 6e-98
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21491235 - 21491019
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||    
T  21491235 gaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcctatgaattaatgttgcttataatgttatataattgtatatacat 21491136  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||| |||| ||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||    
T  21491135 tacatgacttaagtttgataattgagttgttgatttacattcaatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaact 21491036  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  21491035 aagctgcatgagtcggt 21491019  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #4
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21249624 - 21249408
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    |||||||  |||||||||||| ||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21249624 gaggttaggaactaagttgtt-accctgctgttaatgtctcactaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 21249526  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttta-ttaac 199  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||  ||||||||||| ||||||| | ||| |||| |||||    
T  21249525 tacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatgaattgcatactgcttatgttgctatttttttatttaac 21249426  T
Q  200 taagctgcatgagtcggt 217  Q
    ||||||||||||||||||    
T  21249425 taagctgcatgagtcggt 21249408  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #5
Raw Score: 142; E-Value: 1e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21255462 - 21255246
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    |||||||  |||||||||||| ||| ||||||||||||  || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  21255462 gaggttaggaactaagttgtt-accctgctgttaatgtctcactaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 21255364  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttta-ttaac 199  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||  ||||||||||| ||||||| | ||| |||| |||||    
T  21255363 tacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatgaattgcatactgcttatgttgctatttttttatttaac 21255264  T
Q  200 taagctgcatgagtcggt 217  Q
    ||||||||||||||||||    
T  21255263 taagctgcatgagtcggt 21255246  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #6
Raw Score: 88; E-Value: 2e-42
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 26355578 - 26355795
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||  ||||| ||||| |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  26355578 gaggttagaaactaagttgtttatctttttgttattgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacat 26355677  T
Q  101 tacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaa 198  Q
    || |||   || | |||||   |||| || || |  ||  |||||||||| ||||||| | ||| |||||||||||||||||||||||||||||  ||||    
T  26355678 taaatggaatatg-ttgatggctgagatgttgttgattgcattcgatattgttatatcgtgatgatttgcatactgcctatgttgttgtttgttgtttaa 26355776  T
Q  199 ctaagctgcatgagtcggt 217  Q
    |||||||||||||||||||    
T  26355777 ctaagctgcatgagtcggt 26355795  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #7
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 10 - 217
Target Start/End: Original strand, 38855139 - 38855348
Alignment:
Q  10 aactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgact 109  Q
    |||||||||||||| |||||||||  |||| ||||||| ||||    ||| |  |||||||| |  ||||||||||||||||||||||||||| |||| |    
T  38855139 aactaagttgtttatcttgctgttgttgtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacattatatgaat 38855238  T
Q  110 taagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctg 206  Q
    || ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||||||||||    
T  38855239 tatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctg 38855337  T
Q  207 catgagtcggt 217  Q
    |||||||||||    
T  38855338 catgagtcggt 38855348  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #8
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 6520610 - 6520392
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||| |||| |||||||||  |||| ||||||| ||||    ||| |  |||||||| |  |||||||||||||||||||||||||    
T  6520610 gaggttagaaactaagttatttatcttgctgttgttgtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacat 6520511  T
Q  101 tacatgacttaagtt--tgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaa 198  Q
    ||||||| ||| |||  || | ||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||    
T  6520510 tacatgaattatgttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaa 6520411  T
Q  199 ctaagctgcatgagtcggt 217  Q
    |||||||||||||||||||    
T  6520410 ctaagctgcatgagtcggt 6520392  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #9
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 20498798 - 20498586
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||| |||| ||||| | ||||||||||||  ||||| || |||||| ||||||||| ||||||||||||||||||||| |||     
T  20498798 aaactaagttgtttatcttgatgttgatgtttcggtaagactgatgtatatgatttgatgttgtttataatgtgatataattgtatatacattacttgaa 20498699  T
Q  109 ttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    |||  | || ||  ||||   |||| ||| ||  ||| |||||| |||||||||  |  ||| |||||||||||||||| |||||||||||||||||||     
T  20498698 ttatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgctattttacatactgcctatgttgctgtttgtttattaactaagt 20498599  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  20498598 tgcatgagtcggt 20498586  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 23760719 - 23760941
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttc---cagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatat 96  Q
    |||||||||||||||||||||||||||| ||||  ||||    ||||||| |||| |   |||||  |||||||| |  ||||| |||||||||||||||    
T  23760719 gaggttaaaaactaagttgtttaccttgttgttgttgttgtttcagtaagcctgaataaatatgatctaatgttgttgttaatggtatataattgtatat 23760818  T
Q  97 acattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgttt 193  Q
    |||||| |||| ||| ||| |||| |||||   ||| ||||||  |||| ||||| ||||||||| ||| ||| |||||||||||||||| ||||||||     
T  23760819 acattatatgaattatgtt-gatatttgagatgttgttgatttgaattcaatattgttatatcatgatgatttacatactgcctatgttgctgtttgtta 23760917  T
Q  194 attaactaagctgcatgagtcggt 217  Q
     |||||||||||||||||||||||    
T  23760918 tttaactaagctgcatgagtcggt 23760941  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 21285765 - 21285621
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    ||||| ||||||||||||||||||||||||||  || |||||||  |||||   ||| ||||||  ||| |||||| |||||||||  || |||||||||    
T  21285765 taatgatatataattgtatatacattacatgaactatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatcatgttgttttgcatac 21285666  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||  ||||| |||||||||||||||||    
T  21285665 tgcctatgttgttgtttgttatttaacaaagctgcatgagtcggt 21285621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #12
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 17612132 - 17612204
Alignment:
Q  142 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||| ||| ||||||||||||||||||||||| ||||| |||||||||||||||||||||    
T  17612132 cgatattattatatcatgatgttttgcatactgcctatgttgttgattgttaattaactaagctgcatgagtc 17612204  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #13
Raw Score: 52; E-Value: 5e-21
Query Start/End: Original strand, 57 - 216
Target Start/End: Original strand, 17439439 - 17439603
Alignment:
Q  57 tatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattat 153  Q
    ||||| ||||||||| | ||||||| ||||| |||||||| |||||||||| |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||    
T  17439439 tatgatttaatgttgataataatgtgatatatttgtatatgcattacatgaattatatatgatgtttgagatgttgttgatttgcatttgatattgttat 17439538  T
Q  154 atcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcgg 216  Q
    ||||| |  || |||   |||||||||||||||||||||||||||||||||||||||||||||||    
T  17439539 atcatgaactgttttatgtactgcctatgttgttgtttgtttattaactaagctgcatgagtcgg 17439603  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #14
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 21673871 - 21673728
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    ||||| ||||||||||||||||||||| || | |||  || |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||||||     
T  21673871 taatggtatataattgtatatacattaaataaattatatt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcataa 21673773  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||  ||||||| | |||||||||||||    
T  21673772 tgcctatgttgttgtttgttatttaactatgatgcatgagtcggt 21673728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #15
Raw Score: 49; E-Value: 3e-19
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 37116584 - 37116371
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||| ||| ||| |||||  |||| ||||||| |||||    |||| || |||||| | ||||||| ||||| |||||||| ||||||||||     
T  37116584 aaactaagttgcttatcttactgttgttgtttcagtaagcctgatttagatgatttgatgttgttaataatgtgatatatttgtatatgcattacatgaa 37116485  T
Q  109 ttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
    |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||||||| |  || |||   |||||||||||||| |||||||||||||||||||    
T  37116484 ttatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttgtttattaactaag 37116385  T
Q  204 ctgcatgagtcggt 217  Q
    ||||||||||||||    
T  37116384 ctgcatgagtcggt 37116371  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #16
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 17267044 - 17267091
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  17267044 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 17267091  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 13508105 - 13508179
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||||| ||| | |||||| ||||||||||| || ||||| |||||||||||||||||||||    
T  13508105 ttcgatattattatatcatgatgttgtgcatattgcctatgttgctgattgttaattaactaagctgcatgagtc 13508179  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #18
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 13597637 - 13597711
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||||| ||| ||||||| |||| ||||||| || ||||| |||||||||||||||||||||    
T  13597637 ttcgatattattatatcatgatgttttgcattctgcttatgttgctgattgttaattaactaagctgcatgagtc 13597711  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #19
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 65 - 217
Target Start/End: Original strand, 983347 - 983503
Alignment:
Q  65 aatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta-- 160  Q
    ||||||| | |||||||||||||  |||||||||||||||||| ||| |||||||  | ||| |||| ||| ||  ||| || ||| ||||||||| |      
T  983347 aatgttgttgataatgttatatagctgtatatacattacatgaattatgtttgatgttgtgatgttgttgaattgcatttgagattgttatatcatgaac 983446  T
Q  161 tggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    | ||||||||||||||||||||| || |||||  |||||||||||||||||||||||    
T  983447 ttgtttgcatactgcctatgttgctgattgttatttaactaagctgcatgagtcggt 983503  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #20
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 19154936 - 19154984
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  19154936 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 19154984  T

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Target: chr8; HSP #21
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 24353091 - 24353044
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  24353091 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 24353044  T

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Target: chr8; HSP #22
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 21396029 - 21396077
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21396029 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 21396077  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #23
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 21790522 - 21790570
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  21790522 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 21790570  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #24
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 22626850 - 22626760
Alignment:
Q  126 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||| |||| ||||||||||| ||||  || |||| ||||||||||||||| || |||||  |||||||||||||||||||||||    
T  22626850 gttgttgatttgtatttgatattattatgtcatgttgttttgtatactgcctatgttgctg-ttgttatttaactaagctgcatgagtcggt 22626760  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #25
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 21389499 - 21389547
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  21389499 atactacctatgttgttgtttgttatttaactaagctgcatgagtcggt 21389547  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #26
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 21778825 - 21778873
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||| ||||||||||||||||||  |||||||||||||||||||||||    
T  21778825 atactacctatgttgttgtttgttatttaactaagctgcatgagtcggt 21778873  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #27
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 22525628 - 22525582
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||| ||||||||| ||||||||||||||||||||||||||||    
T  22525628 tactgcctaagttgttgtt-gtttattaactaagctgcatgagtcggt 22525582  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #28
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 16199687 - 16199741
Alignment:
Q  163 gtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||| |||||| |||||||| ||||||||  |||||||||||||||||||||||    
T  16199687 gtttgaatactgtctatgttgctgtttgttatttaactaagctgcatgagtcggt 16199741  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #29
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 31971354 - 31971281
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  31971354 gatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 31971281  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 7372854 - 7372802
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  7372854 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 7372802  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 18818454 - 18818506
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  18818454 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 18818506  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 18879276 - 18879328
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  18879276 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 18879328  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 21919045 - 21919097
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  21919045 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 21919097  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 23406455 - 23406403
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  23406455 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 23406403  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #35
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 28397617 - 28397574
Alignment:
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||| || |||||| ||||||||||||||||||    
T  28397617 tgcctatgttgttgtt-gtctattaattaagctgcatgagtcggt 28397574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr8; HSP #36
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 28649094 - 28649141
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| | ||||||  |||||||||||||||||||||||    
T  28649094 atactgcctatgttgct-tttgttatttaactaagctgcatgagtcggt 28649141  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7 (Bit Score: 185; Significance: 1e-100; HSPs: 34)
Name: chr7
Description:

Target: chr7; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 28505179 - 28505395
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28505179 gaggttagaaactaagttgtttaccttgttgtcaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 28505278  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    |||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||    
T  28505279 tacatgacttaagtttgataattgagttgctgatttatatccgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaact 28505378  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  28505379 aagctgcatgagtcggt 28505395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #2
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 34201026 - 34200810
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  34201026 gaggttagaaactaagttgtttaccttgctgttaatgtcccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 34200927  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||    
T  34200926 tacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaact 34200827  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  34200826 aagctgcatgagtcggt 34200810  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #3
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 11995908 - 11996124
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  11995908 gaggttagaaactaatttgtttaccttgctgttaatgtcccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 11996007  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    |||||||||||||||||||| |||||||| ||||||| |||| ||||||||||||||| ||||||||||||||||||||||||||||||||| |||||||    
T  11996008 tacatgacttaagtttgatatttgagttgttgatttacattcaatattattatatcatgatggtttgcatactgcctatgttgttgtttgttaattaact 11996107  T
Q  201 aagctgcatgagtcggt 217  Q
    ||| |||||||||||||    
T  11996108 aagatgcatgagtcggt 11996124  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #4
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 15754767 - 15754981
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaatt-aatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  15754767 gaggttagaaactaagttgtttatcttgctgttaatattccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatataca 15754866  T
Q  100 ttacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaac 199  Q
    |||||||||||| |||||||| |||||||| ||||||  |||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||  |||||    
T  15754867 ttacatgacttatgtttgatatttgagttgttgatttgcattcgatattattatatcatgatggtttgcatactacctatattgttatttgttatttaac 15754966  T
Q  200 taagctgcatgagtc 214  Q
    |||||||||||||||    
T  15754967 taagctgcatgagtc 15754981  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #5
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 73 - 217
Target Start/End: Complemental strand, 16495570 - 16495426
Alignment:
Q  73 ttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  16495570 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 16495471  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  16495470 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 16495426  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #6
Raw Score: 86; E-Value: 3e-41
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 44014417 - 44014202
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||||||||||||||||| | |||||||||  |||| ||||||| |||| |   |||||  |||||||| || ||||| ||||||| ||||||||||    
T  44014417 gaggttaaaaactaagttgtt-atcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgtttttaatggtatataactgtatataca 44014319  T
Q  100 ttacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaac 199  Q
    ||| |||| ||| ||| |||| ||||| || ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  |||||    
T  44014318 ttatatgaattatgtt-gatatttgagatgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaac 44014220  T
Q  200 taagctgcatgagtcggt 217  Q
    ||||||||||||||||||    
T  44014219 taagctgcatgagtcggt 44014202  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #7
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 16219595 - 16219814
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||||  |||| ||||||| ||||    ||| |  |||||||| |  |||||||||||||||||||||||||    
T  16219595 gaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgttatataattgtatatacat 16219694  T
Q  101 tacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||  || || || ||||   ||  |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  |||    
T  16219695 tacatgaattatgtttgatgtttaagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttattta 16219794  T
Q  198 actaagctgcatgagtcggt 217  Q
    |||||||| |||||||||||    
T  16219795 actaagctacatgagtcggt 16219814  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #8
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 67987 - 67769
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||||||||  |||| |||| || |||| |   |||||  |||||||| |  ||||||||||||||||||||||||    
T  67987 gaggttagaaactaagttgtttatcttgctgttgttgtttcagtgagcctgaattaatatgatctaatgttgttgttaatgttatataattgtatataca 67888  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||    
T  67887 ttatatgaattatgtt-gata-ttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttattt 67790  T
Q  197 aactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||    
T  67789 aactaagctgcatgagtcggt 67769  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #9
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 18005889 - 18005670
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||||||||  |||| ||||||| |||||    |||||  |||||||| |  ||||| ||||||||||||||||||    
T  18005889 gaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgatttaatatgatctaatgttgttgttaatggtatataattgtatataca 18005790  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||||| ||||||| ||||||||  ||    
T  18005789 ttatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttccatactgcttatgttgctgtttgttattt 18005691  T
Q  197 aactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||    
T  18005690 aactaagctgcatgagtcggt 18005670  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #10
Raw Score: 66; E-Value: 2e-29
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 12901559 - 12901347
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||| ||||  |||| |||||||  |||    ||||| ||||||||| |  |||||||||||| |||||||||||||||||||     
T  12901559 aaactaagttgtttatcttgttgttgttgtttcagtaagcttgaattatatgatttaatgttgttgttaatgttatatagttgtatatacattacatgaa 12901460  T
Q  109 ttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    ||| || ||||  | ||| ||||||| |||  ||| |||||| ||||||||| |  |  |||| ||||||||||||||||||||||||||||||||||||    
T  12901459 ttatgtatgatgttgtgatgttgctgttttgcatttgatattgttatatcatgaattattttgtatactgcctatgttgttgtttgtttattaactaagc 12901360  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  12901359 tgcatgagtcggt 12901347  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #11
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 2280125 - 2280216
Alignment:
Q  126 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||  ||| ||||||||||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2280125 gttgttgatttgcatttgatattattatatcatgctgttttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 2280216  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #12
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 20220075 - 20220285
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||| ||| ||| |||||  |||||||||||| |||||    |||| || |||||| | ||||||| |||||||||||||| ||||||||||     
T  20220075 aaactaagttgcttatcttactgttgttgttccagtaagcctgatttagatgatttgatgttgttaataatgtgatataattgtatatgcattacatgaa 20220174  T
Q  109 ttaagtttgataattgagttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagctg 206  Q
    |||  | ||||  ||||| || ||||||  ||| |||||| ||||||||| |  || |||   |||||||||||||||||||||||||||||||||||||    
T  20220175 ttatatatgatgtttgagatgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgttgtttgtttattaactaagctg 20220274  T
Q  207 catgagtcggt 217  Q
     ||||||||||    
T  20220275 tatgagtcggt 20220285  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #13
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 811084 - 811228
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  ||  || |||  ||| ||  |||||||||| ||||||||| ||| |||||||||    
T  811084 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttaatgacttgcattcgatattgttatatcatgatgatttgcatac 811183  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| | ||||||  |||||||||||||||||||||||    
T  811184 tgcctatgttgctatttgttatttaactaagctgcatgagtcggt 811228  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #14
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 47831975 - 47831831
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    ||||||||||||||||||||||||||| |||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| | |||||||    
T  47831975 taatgttatataattgtatatacattatatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatatgcatac 47831876  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    || |||||||||||||||||  |||||||||||||||||||||||    
T  47831875 tgtctatgttgttgtttgttatttaactaagctgcatgagtcggt 47831831  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 16056495 - 16056352
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  ||||   |||| ||||||  ||| |||||| |||||||| | | |||||||||     
T  16056495 taatgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgatttgcatttgatattgttatatca-tgttgtttgcataa 16056397  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    || |||||||| ||||||||  ||||||||| ||||| |||||||    
T  16056396 tgtctatgttgctgtttgttatttaactaaggtgcatcagtcggt 16056352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #16
Raw Score: 50; E-Value: 8e-20
Query Start/End: Original strand, 76 - 210
Target Start/End: Complemental strand, 22073083 - 22072944
Alignment:
Q  76 taatgttatataattgtatatacattacatga-cttaagtttgataattga---gttgctgatttatattcgatattattatatcattatgg-tttgcat 170  Q
    |||||||||||||||| |||||||||||||||  ||| |||||||  ||||   |||| ||| ||| ||| |||||| |||||||||  ||| |||||||    
T  22073083 taatgttatataattgcatatacattacatgagtttatgtttgatgtttgagatgttgttgacttacatttgatattgttatatcatgctggttttgcat 22072984  T
Q  171 actgcctatgttgttgtttgtttattaactaagctgcatg 210  Q
    | ||||||||||||||||||||  ||||||||||||||||    
T  22072983 agtgcctatgttgttgtttgttatttaactaagctgcatg 22072944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #17
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 143 - 215
Target Start/End: Complemental strand, 48991280 - 48991206
Alignment:
Q  143 gatattattatatc--attatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 215  Q
    ||||||||||||||  | |||| |||  |||||||||||||||||||||||||||||||||||||||||||||||    
T  48991280 gatattattatatctgaatatgttttatatactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 48991206  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #18
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 1868044 - 1868092
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||| ||||||||||||||||||||||||||||    
T  1868044 atactgcctatgttgttgttagtttattaactaagctgcatgagtcggt 1868092  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #19
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 15008548 - 15008596
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||| |||||||||||||||||||||||||||||||||||||||||||    
T  15008548 atactacctatgttgttgtttgtttattaactaagctgcatgagtcggt 15008596  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 19486766 - 19486841
Alignment:
Q  142 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |  || | ||||||||||||||||||||||    
T  19486766 cgatattattatatcatgatgttttgcatactgcctatgttgctgatcattaactaactaagctgcatgagtcggt 19486841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #21
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 10063838 - 10063912
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||||| ||| | ||||||| |||||||||| || ||||| |||||||||| ||||||||||    
T  10063838 ttcgatattattatatcatgatgttgtgcataccgcctatgttgctgattgttaattaactaagttgcatgagtc 10063912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #22
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 15113178 - 15113084
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattac 103  Q
    ||||||||||||||| | |||||||| |||| |||||||||||||   ||||| || |||||  ||||||||| ||||||||||||||| |||||    
T  15113178 aaactaagttgtttatcctgctgttattgtttcagtaagactgatttatatgagttgatgttaattataatgtgatataattgtatatatattac 15113084  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #23
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 9 - 103
Target Start/End: Complemental strand, 15116715 - 15116621
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattac 103  Q
    ||||||||||||||| | | |||||| |||| ||||||||||||||  ||||| || |||||  ||||||||| ||||||||||||||| |||||    
T  15116715 aaactaagttgtttatcctactgttattgtttcagtaagactgatgtatatgagttgatgttatttataatgtgatataattgtatatatattac 15116621  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #24
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 14044935 - 14044770
Alignment:
Q  57 tatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatat---tcgatattattat 153  Q
    ||||| ||||||||  | ||||||||||||| ||||||||||||||||||| |||  | ||||  ||||| || ||||| || |   | |||||| ||||    
T  14044935 tatgatttaatgtttttgataatgttatatagttgtatatacattacatgaattatatatgatgtttgagatgttgattgatttgtattgatattgttat 14044836  T
Q  154 atcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||  |  || |||   |||||||||||||| | |||||||||||||||||||||||||||||||    
T  14044835 atcaggagctgttttatgtactgcctatgttgctttttgtttattaactaagctgcatgagtcggt 14044770  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #25
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 57 - 217
Target Start/End: Complemental strand, 14354965 - 14354800
Alignment:
Q  57 tatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatat---tcgatattattat 153  Q
    ||||| ||||||||  | ||||||||||||| ||||||||||||||||||| |||  | ||||  ||||| || ||||| || |   | |||||| ||||    
T  14354965 tatgatttaatgtttttgataatgttatatagttgtatatacattacatgaattatatatgatgtttgagatgttgattgatttgtattgatattgttat 14354866  T
Q  154 atcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||  |  || |||   |||||||||||||| | |||||||||||||||||||||||||||||||    
T  14354865 atcaggagctgttttatgtactgcctatgttgctttttgtttattaactaagctgcatgagtcggt 14354800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #26
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 14036325 - 14036282
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagt 213  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  14036325 tactgcctatgttgctgtttgtttattaactaagctgcatgagt 14036282  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #27
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 14346355 - 14346312
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagt 213  Q
    |||||||||||||| |||||||||||||||||||||||||||||    
T  14346355 tactgcctatgttgctgtttgtttattaactaagctgcatgagt 14346312  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #28
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 164 - 214
Target Start/End: Original strand, 12255837 - 12255887
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||| |||||||||||||||||  ||||||||||||||||||||    
T  12255837 tttgcatactgactatgttgttgtttgttatttaactaagctgcatgagtc 12255887  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #29
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 16386292 - 16386345
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||| ||||||||||  |||||||||||||||||||||||    
T  16386292 tttgtatactgcctatgtcgttgtttgttatttaactaagctgcatgagtcggt 16386345  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #30
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 13647401 - 13647349
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  13647401 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 13647349  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #31
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Complemental strand, 18203882 - 18203838
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 215  Q
    ||||| ||||||||||||| ||||||||||||||||||||||||||    
T  18203882 tactgtctatgttgttgtt-gtttattaactaagctgcatgagtcg 18203838  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #32
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 38227578 - 38227505
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| ||||||||||||||| | || |||  |||||||||||||||||||||||    
T  38227578 gatattattatgtcatgctgttttgtatactgcctatgttgctatt-gttatttaactaagctgcatgagtcggt 38227505  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 3564409 - 3564461
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  3564409 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 3564461  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr7; HSP #34
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 12698907 - 12698855
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  12698907 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 12698855  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5 (Bit Score: 185; Significance: 1e-100; HSPs: 23)
Name: chr5
Description:

Target: chr5; HSP #1
Raw Score: 185; E-Value: 1e-100
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 19660716 - 19660932
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  19660716 gaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 19660815  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||  |||||||||||||||||||||||| ||||||||  ||||||    
T  19660816 tacatgacttaagtttgataattgagttgttgatttatattcgatatcattatatcaagatggtttgcatactgcctatgttgctgtttgttatttaact 19660915  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  19660916 aagctgcatgagtcggt 19660932  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 22959413 - 22959629
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    |||||||||||| |||||||||| |||| ||||  |||||||||||||||||||| ||||||| ||||||| ||| ||||||||||||||||||||||||    
T  22959413 gaggttaaaaaccaagttgtttatcttgttgtttttgttccagtaagactgatgcatatgaatcaatgttggttaaaatgttatataattgtatatacat 22959512  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||| |||||||| |||||||| ||||||  |||| ||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||||    
T  22959513 tacatgacttatgtttgatatttgagttgttgatttgcattcaatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaact 22959612  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  22959613 aagctgcatgagtcggt 22959629  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #3
Raw Score: 112; E-Value: 8e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 19669140 - 19668922
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaat--taatgttgcttataatgttatataattgtatatac 98  Q
    ||||||| ||||||||| ||||| |||| ||||  |||||||||||||||||||| |||||||  | |||||| ||||||||||||||||||||||||||    
T  19669140 gaggttagaaactaagtcgtttatcttgttgttgttgttccagtaagactgatgcatatgaatattgatgttgtttataatgttatataattgtatatac 19669041  T
Q  99 attacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaa 198  Q
    |||||| |||||| |||||||| |||||||| ||||||  |||||||||| ||||||||  ||| ||||||||||| |||||||||||||||||  ||||    
T  19669040 attacaggacttatgtttgatatttgagttgttgatttgcattcgatattgttatatcacgatgatttgcatactgtctatgttgttgtttgttatttaa 19668941  T
Q  199 ctaagctgcatgagtcggt 217  Q
    || ||||||| ||||||||    
T  19668940 ctgagctgcaagagtcggt 19668922  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #4
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21565785 - 21565566
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||| ||||  ||||| |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  21565785 gaggttagaaactaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacat 21565686  T
Q  101 tacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||| ||||||||||||||| | ||||||  |||    
T  21565685 tacatgaattatgtttgatatttgaaatgttgatgacttgcattcgatattgttatatcatgatgatttggatactgcctatgttgctatttgttattta 21565586  T
Q  198 actaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||    
T  21565585 actaagctgcatgagtcggt 21565566  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #5
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 8 - 217
Target Start/End: Original strand, 21502040 - 21502253
Alignment:
Q  8 aaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatatacattacatg 106  Q
    |||||||||||||||| |||||||||  |||| ||||||| |||| |   |||||  |||||||| |  |||||||||||||||||||||||||||||||    
T  21502040 aaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatgttatataattgtatatacattacatg 21502139  T
Q  107 acttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
    | ||| |||||||  || || || ||||   ||  |||||||||| |||||||||  || ||| |||||||||||||||| |||||||||||||||||||    
T  21502140 aattatgtttgatgtttaagatgatgatgacttgcattcgatattgttatatcatgctgatttacatactgcctatgttgctgtttgtttattaactaag 21502239  T
Q  204 ctgcatgagtcggt 217  Q
    ||||||||||||||    
T  21502240 ctgcatgagtcggt 21502253  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #6
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 78 - 217
Target Start/End: Original strand, 26011990 - 26012132
Alignment:
Q  78 atgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactg 174  Q
    |||||||||||||||||||||||||||||| ||| |||||||  |||||   ||| ||||| | ||| |||||| |||||||||  || |||||||||||    
T  26011990 atgttatataattgtatatacattacatgaattatgtttgatgtttgagatgttgttgattcacatttgatattgttatatcatgttgctttgcatactg 26012089  T
Q  175 cctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||| |||||||||||||||||||||||||||||||||    
T  26012090 cctatgttgctgtttgtttattaactaagctgcatgagtcggt 26012132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #7
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 21329383 - 21329594
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||| ||||  |||| ||||||| ||||    ||| |  |||||||| |  ||||||||||||||||||||||||||||||||     
T  21329383 aaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacattacatgaa 21329482  T
Q  109 ttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagct 205  Q
    ||| |||||||  ||  || |||| ||| ||  |||||||||| |||||| || ||| |||||||||||||||||||| ||||||||  |||||||||||    
T  21329483 ttatgtttgatgtttatgatgttgatgacttgaattcgatattgttatattatgatgatttgcatactgcctatgttgctgtttgttatttaactaagct 21329582  T
Q  206 gcatgagtcggt 217  Q
    ||||||||||||    
T  21329583 gcatgagtcggt 21329594  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #8
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 20026826 - 20027038
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||| |||   |||| ||||||| ||||    ||||  ||||||||| | |||||| |||||| |||||||||||||||||||     
T  20026826 aaactaagttgtttatcttgttgtagttgtttcagtaagcctgaattatatgttttaatgttgttgataatgctatatagttgtatatacattacatgaa 20026925  T
Q  109 ttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    ||| |||||||  | ||| |||| ||| ||  ||| |||||||||||||||| |  || |||| ||||||||||||||| ||||||||  ||||||||||    
T  20026926 ttatgtttgatgttgtgatgttgttgaattgcatttgatattattatatcatgaactgttttggatactgcctatgttgctgtttgttatttaactaagc 20027025  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  20027026 tgcatgagtcggt 20027038  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #9
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 140 - 217
Target Start/End: Complemental strand, 36314678 - 36314601
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||| |||||||||||||| ||||||||| ||||||||  |||||||||||||||||||||||    
T  36314678 ttcgatattattatatcatgatggtttgcatactacctatgttgctgtttgttatttaactaagctgcatgagtcggt 36314601  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 22178270 - 22178318
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22178270 atactgcctatgttgttgtttgtttattaactaagttgcatgagtcggt 22178318  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #11
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 73 - 120
Target Start/End: Complemental strand, 36314719 - 36314672
Alignment:
Q  73 ttataatgttatataattgtatatacattacatgacttaagtttgata 120  Q
    ||||||||||||||||||||||||||||||||||||||||||| ||||    
T  36314719 ttataatgttatataattgtatatacattacatgacttaagttcgata 36314672  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Complemental strand, 40725952 - 40725877
Alignment:
Q  142 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| || |  || | ||||||||||||||||||||||    
T  40725952 cgatattattatatcatgatgctttgcatactgcctacgttgctgatcattaactaactaagctgcatgagtcggt 40725877  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #13
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 22144147 - 22144073
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||| |||||||||  || |||||||||| ||||||||| ||| ||||  |||||||||||||||||||||||    
T  22144147 gatattgttatatcatgttgttttgcatactacctatgttgatgtctgttatttaactaagctgcatgagtcggt 22144073  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #14
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 26732884 - 26732929
Alignment:
Q  171 actgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  26732884 actgcctatgttgctgtt-gtttattaactaagctgcatgagtcggt 26732929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #15
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 24529296 - 24529244
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  24529296 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 24529244  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #16
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 25421608 - 25421556
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  25421608 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 25421556  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #17
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Original strand, 26740697 - 26740742
Alignment:
Q  171 actgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||| |||| ||||||||||||||||||||||||||||    
T  26740697 actgtctatgttgctgtt-gtttattaactaagctgcatgagtcggt 26740742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 8286888 - 8286940
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  8286888 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 8286940  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 21729109 - 21729161
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  21729109 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 21729161  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 21808434 - 21808486
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  21808434 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 21808486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 21997579 - 21997631
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  21997579 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 21997631  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 188 - 217
Target Start/End: Original strand, 27988997 - 27989026
Alignment:
Q  188 ttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||||||||    
T  27988997 ttgtttattaactaagctgcatgagtcggt 27989026  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr5; HSP #23
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 169 - 214
Target Start/End: Complemental strand, 37723975 - 37723930
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||| ||| ||||  ||||||||||||||||||||    
T  37723975 atactgcctatgttgctgtctgttatttaactaagctgcatgagtc 37723930  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046 (Bit Score: 177; Significance: 1e-95; HSPs: 3)
Name: scaffold0046
Description:

Target: scaffold0046; HSP #1
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 2229 - 2021
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2229 aaactaagttgtttaccttgctgttaatgttccagtaagtctgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 2130  T
Q  109 ttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgca 208  Q
    ||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||  ||||||||  ||||||||||||||    
T  2129 ttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgtttgtgtttgttatttaactaagctgca 2030  T
Q  209 tgagtcggt 217  Q
    |||||||||    
T  2029 tgagtcggt 2021  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #2
Raw Score: 177; E-Value: 1e-95
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 11532 - 11316
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||    
T  11532 gaggttagaaactaagttgtttaccttggtgttaatgttcaagtaagactgatgcttatgaattaatgttgcttataatgttatataatagtatatacat 11433  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| ||||||||  ||||||    
T  11432 tacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctgtttgttatttaact 11333  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  11332 aagctgcatgagtcggt 11316  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0046; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 28490 - 28438
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  28490 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 28438  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2 (Bit Score: 173; Significance: 3e-93; HSPs: 27)
Name: chr2
Description:

Target: chr2; HSP #1
Raw Score: 173; E-Value: 3e-93
Query Start/End: Original strand, 20 - 216
Target Start/End: Original strand, 23071849 - 23072045
Alignment:
Q  20 tttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgat 119  Q
    ||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  23071849 tttaccttgttgctaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgat 23071948  T
Q  120 aattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcgg 216  Q
    ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||  ||||||||||||||||||||||    
T  23071949 aattgagttgctgatttatattcgatattattatatcatgatggtttgcatactgcctatgttgttgttcgttatttaactaagctgcatgagtcgg 23072045  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #2
Raw Score: 69; E-Value: 4e-31
Query Start/End: Original strand, 1 - 211
Target Start/End: Complemental strand, 25176093 - 25175880
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||||||||  |||| ||||||| |||| |   |||||  |||||||| |  ||||||||||||||| |||||||     
T  25176093 gaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatgttatataattatatatacg 25175994  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||    
T  25175993 ttatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttattt 25175895  T
Q  197 aactaagctgcatga 211  Q
    |||||||||||||||    
T  25175894 aactaagctgcatga 25175880  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #3
Raw Score: 57; E-Value: 6e-24
Query Start/End: Original strand, 78 - 214
Target Start/End: Complemental strand, 7679750 - 7679612
Alignment:
Q  78 atgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactg 174  Q
    ||||||||||||| |||||||||||||||| ||| |||||||  ||  || |||| ||| ||| ||| |||||| ||||||||| ||| |||||||||||    
T  7679750 atgttatataattatatatacattacatgaattatgtttgatgtttatgatgttgatgacttacatt-gatattgttatatcatgatgatttgcatactg 7679652  T
Q  175 cctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||| ||||||||  ||||||||||||||||||||    
T  7679651 cctatgttgctgtttgttatttaactaagctgcatgagtc 7679612  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #4
Raw Score: 56; E-Value: 2e-23
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 28406144 - 28406000
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggttt-gcata 171  Q
    ||||| ||||||||||||||||||||  |||| ||||||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||    
T  28406144 taatggtatataattgtatatacattttatgaattaagtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgattttgcata 28406046  T
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||| ||||||||  ||||||||| |||||||||||||    
T  28406045 ctgcctatgttgctgtttgttatttaactaagttgcatgagtcggt 28406000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #5
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 19671931 - 19671857
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  19671931 ttcgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtc 19671857  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #6
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 7618 - 7824
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| | || ||||  |||| ||||||| ||||    ||||| ||||||||| |  |||||| ||||||||||||||||||||| |||     
T  7618 aaactaagttgtttatcatgttgttgttgtttcagtaagcctgaattatatgatttaatgttgttgttaatgtgatataattgtatatacattacttgaa 7717  T
Q  109 ttaagtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    |||  | ||| |  ||||| || ||||   ||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||||||||||||||    
T  7718 ttatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagc 7817  T
Q  205 tgcatga 211  Q
    |||||||    
T  7818 tgcatga 7824  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #7
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 22134095 - 22134303
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||| | | |||||||||||||||||| ||||||||  ||||| ||||||||        ||||||||||||    
T  22134095 gaggttagaaactaagttgtttatcttgctgtcatttttccagtaagactgatgcatatgaattggtgttgtttataatg--------ttgtatatacat 22134186  T
Q  101 tacatgacttaagtttgataattgagttgctgatttat---attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    || |||  ||| | ||||||| |||| || | ||| ||   |||||||||| |||||| || ||| |||||||||||||||||||| || ||| |  |||    
T  22134187 taaatggattatg-ttgataaatgagatg-ttattgattgcattcgatattgttatattatgatgatttgcatactgcctatgttgctg-ttgatattta 22134283  T
Q  198 actaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||    
T  22134284 actaagctgcatgagtcggt 22134303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #8
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 9 - 103
Target Start/End: Original strand, 22459447 - 22459541
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattac 103  Q
    ||||||||||||||| |||||||||| |||| ||||||||||||||  || || || |||||  ||||||||| |||||||||||||||||||||    
T  22459447 aaactaagttgtttatcttgctgttattgtttcagtaagactgatgtatacgagttgatgttatttataatgtgatataattgtatatacattac 22459541  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #9
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 18786788 - 18787000
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| | |||||||  |||| ||||||| || |    ||||| | ||||||  | ||||||||||||| |||||||||||||||||||     
T  18786788 aaactaagttgtttatcatgctgttgttgtttcagtaagcctaaattatatgattgaatgttattgataatgttatatagttgtatatacattacatgaa 18786887  T
Q  109 ttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    ||| |||||||  | ||| |||| ||| ||  ||| || ||| ||||||||| |  ||||||||||||| ||||||||  || |||||  ||||||||||    
T  18786888 ttatgtttgatgttgtgacgttgttgaattgcatttgagattgttatatcatgaactggtttgcatactacctatgttactgattgttatttaactaagc 18786987  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  18786988 tgcatgagtcggt 18787000  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #10
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 22413187 - 22413235
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||||||||||||| |||||||||||||    
T  22413187 atactgcctatgttgttgtttgtttattaactaagttgcatgagtcggt 22413235  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #11
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 23207349 - 23207301
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  23207349 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 23207301  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #12
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 23791510 - 23791297
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||| ||||  |||| ||||||| ||||    ||||| || |||||| | ||||||| |||||| ||||||| ||||||||||     
T  23791510 aaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaa 23791411  T
Q  109 ttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
    |||  | | ||  |||||   ||| ||||||  ||| |||||| ||||||||| |  || |||   ||||||||||||||||||||| ||||||||||||    
T  23791410 ttatatataatgtttgagatgttgttgatttgcatttgatatttttatatcatgaactgttttatgtactgcctatgttgttgtttgcttattaactaag 23791311  T
Q  204 ctgcatgagtcggt 217  Q
    || |||||||||||    
T  23791310 ctacatgagtcggt 23791297  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #13
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 25108958 - 25108911
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||||||||||||||||| |||||||||||    
T  25108958 tactgcctatgttgttgtttgtttattaactaagctacatgagtcggt 25108911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #14
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 20520243 - 20520290
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  20520243 tactgcatatgttgctgtttgtttattaactaagctgcatgagtcggt 20520290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 23004819 - 23004772
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||| |||||||||||||||||||||||||||||||||    
T  23004819 tactacctatgttgctgtttgtttattaactaagctgcatgagtcggt 23004772  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 298859 - 298912
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  298859 tttgtatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 298912  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #17
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 58 - 217
Target Start/End: Original strand, 23708553 - 23708716
Alignment:
Q  58 atgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttga-taattgagttgc---tgatttatattcgatattattat 153  Q
    ||||||| |||||| ||||||||| |||||||||||||| |||||| ||| |||  ||||| |  ||||| ||    ||||||  | | |||||| ||||    
T  23708553 atgaattgatgttgtttataatgtgatataattgtatatgcattacttgaattatatttgaatgtttgagatgtcgatgatttgcaattgatattgttat 23708652  T
Q  154 atcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||  || |||||||||||||||||||| | | ||||  ||||||||||||| |||||||||    
T  23708653 atcatgttgttttgcatactgcctatgttgctatctgttatttaactaagctgcttgagtcggt 23708716  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #18
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 23287433 - 23287387
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||||    
T  23287433 tactgcctatgttgctgtt-gtttattaactaagctgcatgagtcggt 23287387  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #19
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 24697657 - 24697704
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||| |||||||||||||||||||||| | |||||||||||||    
T  24697657 tactgcctacgttgttgtttgtttattaactatgttgcatgagtcggt 24697704  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #20
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 38138 - 38211
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  38138 gatattattatgtcatgctgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 38211  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 26392451 - 26392406
Alignment:
Q  171 actgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||| |||| ||||||||||||||||||||||||||||    
T  26392451 actgcctatgttgctgtt-gtttattaactaagctgcatgagtcggt 26392406  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #22
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 22105485 - 22105433
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  22105485 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 22105433  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #23
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 20309180 - 20309132
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| | ||||||  |||||||||||||||||||||||    
T  20309180 atactgcctatgttgctatttgttatttaactaagctgcatgagtcggt 20309132  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 23103439 - 23103492
Alignment:
Q  163 gtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||| ||||||||||||||| ||||| | | |||||||||||||||||||||||    
T  23103439 gtttgtatactgcctatgttgctgtttttat-ttaactaagctgcatgagtcggt 23103492  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #25
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 23060589 - 23060537
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  23060589 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 23060537  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 23076518 - 23076466
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  23076518 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 23076466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr2; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 23285941 - 23285889
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  23285941 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 23285889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0261 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: scaffold0261
Description:

Target: scaffold0261; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 15901 - 15685
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||||||||||||||||| ||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||    
T  15901 gaggttagaaactaagttgtttaccttgctgttaatgatccagtaagactgattcttatgaaataatgttgcttataatgttatataattgtatatacat 15802  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||| ||||||||||||||| ||||||||  ||||||    
T  15801 tacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgtatactgcctatgttgctgtttgttatttaact 15702  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||| ||||||||    
T  15701 aagctgcacgagtcggt 15685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0175 (Bit Score: 169; Significance: 8e-91; HSPs: 1)
Name: scaffold0175
Description:

Target: scaffold0175; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 34363 - 34147
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||    
T  34363 gaggttagaaactaagttgtttaccttgctgttaattttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatatat 34264  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||| ||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||| ||| ||||||||||||||||||||||||  ||||||    
T  34263 tacttgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatgggttgtatactgcctatgttgttgtttgttatttaact 34164  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||| ||||||||||    
T  34163 aagctgtatgagtcggt 34147  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1 (Bit Score: 169; Significance: 8e-91; HSPs: 29)
Name: chr1
Description:

Target: chr1; HSP #1
Raw Score: 169; E-Value: 8e-91
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20918844 - 20918628
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||| |||||||||| ||||||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||||||||||||    
T  20918844 gaggttagaaactaagtcgtttaccttgttgttaatgttccagtaagactcatgcttatgaattgatgttgcttataatgttatataattgtatatacat 20918745  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| ||||||||||||||||||||||||  |||||||  ||||||    
T  20918744 tacatgacttaagtttgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgcagtttgttatttaact 20918645  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  20918644 aagctgcatgagtcggt 20918628  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #2
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 20248518 - 20248303
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||| |||| |||| ||||  ||| |||||||||||||||| |||||||  |||||| |||||||| |||||||||||||||||||    
T  20248518 gaggttagaaactaagttatttatcttgatgttgttgt-ccagtaagactgatgcatatgaatccatgttgtttataatgatatataattgtatatacat 20248420  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||| |||||||| || ||||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||| ||||||    
T  20248419 tacatgacttatgtttgatatttaagttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttttttaact 20248320  T
Q  201 aagctgcatgagtcggt 217  Q
    ||| |||||||||||||    
T  20248319 aagttgcatgagtcggt 20248303  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #3
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 14295504 - 14295648
Alignment:
Q  73 ttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  14295504 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 14295603  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    | ||||||||| ||||||||  |||||||||||||||||||||||    
T  14295604 tacctatgttgctgtttgttatttaactaagctgcatgagtcggt 14295648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #4
Raw Score: 113; E-Value: 2e-57
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 52927860 - 52928067
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||| ||  |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  52927860 gaggttagaaactaagttgtttatcttgctattgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacat 52927959  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||| ||| |||||||| ||||| ||         |||||||||| ||||||||| ||| ||||||||||| |||||||||||||||||  ||||||    
T  52927960 tacatgaattatgtttgatatttgagatg---------attcgatattgttatatcatgatgatttgcatactgtctatgttgttgtttgttatttaact 52928050  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  52928051 aagctgcatgagtcggt 52928067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #5
Raw Score: 110; E-Value: 1e-55
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 33681250 - 33681031
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||| ||||  ||||| |||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  33681250 gaggttagaaactaagttgtttatcttgttgttgttgttctagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacat 33681151  T
Q  101 tacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||| ||||   ||||  || ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  |||    
T  33681150 tacatgaattatgtttgatatttgagatgttgacgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttattta 33681051  T
Q  198 actaagctgcatgagtcggt 217  Q
    |||||| |||||||||||||    
T  33681050 actaagttgcatgagtcggt 33681031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #6
Raw Score: 101; E-Value: 3e-50
Query Start/End: Original strand, 56 - 188
Target Start/End: Original strand, 22130843 - 22130975
Alignment:
Q  56 ttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatat 155  Q
    |||||| || ||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||    
T  22130843 ttatgatttgatgttgcttataatgttatataattgtatatgcattacatgacttaagtttgataattgagttgttgatttacattcgatattattatat 22130942  T
Q  156 cattatggtttgcatactgcctatgttgttgtt 188  Q
    ||| |||||||| ||||||||||||||| ||||    
T  22130943 catgatggtttggatactgcctatgttgctgtt 22130975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #7
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 22237871 - 22237651
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctg-ttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| ||||||| ||  ||||||||  |||||||| | |||||||| |||||| || ||| ||||||||||||||||||||    
T  22237871 gaggttagaaactaagttgtttatcttgctgattgttgttccagcgagactgatacatatgaattgatgttgtttctaaagttatataattgtatataca 22237772  T
Q  100 ttacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    |||||||| ||| |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||| ||||||||| | ||||||||  ||    
T  22237771 ttacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcataatgcctatgtcgctgtttgttattt 22237672  T
Q  197 aactaagctgcatgagtcggt 217  Q
    ||||||||| |||||||||||    
T  22237671 aactaagcttcatgagtcggt 22237651  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #8
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 73 - 173
Target Start/End: Complemental strand, 51130732 - 51130632
Alignment:
Q  73 ttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  51130732 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 51130633  T
Q  173 t 173  Q
    |    
T  51130632 t 51130632  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #9
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 21754278 - 21754069
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||| | |||||||||||||||||||| |||||||| |||||| ||||||||||        ||||||||||    
T  21754278 gaggttagaaactaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttataatgtt--------gtatatacat 21754187  T
Q  101 tacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaa 198  Q
    || |||  ||| ||| |||||||||| || || |  ||  ||| |||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||||    
T  21754186 taaatggattatgtt-gataattgagatgttgttgattgcatttgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaa 21754088  T
Q  199 ctaagctgcatgagtcggt 217  Q
    |||||||||||||||||||    
T  21754087 ctaagctgcatgagtcggt 21754069  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #10
Raw Score: 83; E-Value: 2e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 22921747 - 22921966
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||||||||  |||| ||||||| |||| |   |||||  |||||||| |  ||||||||||||||||||||||||    
T  22921747 gaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatgttatataattgtatataca 22921846  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||  ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||    
T  22921847 ttatatgaattttgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttattt 22921945  T
Q  197 aactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||    
T  22921946 aactaagctgcatgagtcggt 22921966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #11
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 21861455 - 21861667
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||||| ||  |||| ||||||| ||||   ||||||  | |||||| ||||||||| ||||||||||||||||||||| |||     
T  21861455 aaactaagttgtttatcttgctattgttgtttcagtaagcctgaatattatgatatgatgttgtttataatgtgatataattgtatatacattacttgaa 21861554  T
Q  109 ttaagtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    |||  | ||| |  ||||| || ||||   ||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||||||| ||||||    
T  21861555 ttatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgctgtttgtttattagctaagc 21861654  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  21861655 tgcatgagtcggt 21861667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #12
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 21896144 - 21896353
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||| ||||   ||| ||||||| ||||   |||||| || |||||| ||||||||| |||||||||||||||||||||||||     
T  21896144 aaactaagttgtttatcttgttgtt---gtttcagtaagcctgaatattatgatttgatgttgtttataatgtgatataattgtatatacattacatgaa 21896240  T
Q  109 ttaagtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    |||  | ||| |  ||||| || ||||   ||  ||| |||||| |||||||||  || |||| ||||||||||||||| |||||||||||||||||||     
T  21896241 ttatatatgaatgtttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgtatactgcctatgttgctgtttgtttattaactaagt 21896340  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  21896341 tgcatgagtcggt 21896353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #13
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 35261023 - 35261175
Alignment:
Q  66 atgttgcttataatgttatataattgtatatacattacatgacttaagtttga-taattgagttgctgatttatattcgatattattatatcattatggt 164  Q
    |||||| | ||||||| || ||||||||||| |||||| ||| ||| || ||| |  ||||| || ||||||  ||| |||||| |||||||||  || |    
T  35261023 atgttgttaataatgtgatgtaattgtatatgcattacttgaattatgtatgaatgtttgagatgttgatttgcatttgatattgttatatcatgctgtt 35261122  T
Q  165 ttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||| |||||||||||||||||||||||||||||||||    
T  35261123 ttgcatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 35261175  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #14
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 50614167 - 50614214
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  50614167 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 50614214  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #15
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 50621995 - 50622042
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  50621995 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 50622042  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #16
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 16758754 - 16758673
Alignment:
Q  138 tattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||| ||||||||| |  ||||||||||||||||||||||| ||||||||  ||||||||| |||||||||||||    
T  16758754 tatttgatattgttatatcatgaactggtttgcatactgcctatgttgctgtttgttatttaactaagttgcatgagtcggt 16758673  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #17
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 16368338 - 16368383
Alignment:
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  16368338 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 16368383  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #18
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 1 - 117
Target Start/End: Complemental strand, 20637091 - 20636975
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||| ||||||||| ||||    |||||||||| ||||    |||   ||||||||| | ||||||||||||||||||||||||||    
T  20637091 gaggttagaaactaagttatttaccttgatgttgtcattccagtaagcctgaattgtattttttaatgttgatgataatgttatataattgtatatacat 20636992  T
Q  101 tacatgacttaagtttg 117  Q
    || |||| ||| |||||    
T  20636991 tatatgaattatgtttg 20636975  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #19
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 41050085 - 41050133
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||| ||||| ||||||||||||||||||||||    
T  41050085 atactgcctatgttgctgttcgtttagtaactaagctgcatgagtcggt 41050133  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #20
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 170 - 213
Target Start/End: Complemental strand, 26065009 - 26064966
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagt 213  Q
    |||||||||||||| ||||||||||| |||||||||||||||||    
T  26065009 tactgcctatgttgctgtttgtttatcaactaagctgcatgagt 26064966  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #21
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 165 - 215
Target Start/End: Original strand, 38801433 - 38801483
Alignment:
Q  165 ttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 215  Q
    ||||| ||||||||||||| ||||||||  |||||||||||||||||||||    
T  38801433 ttgcacactgcctatgttgctgtttgttatttaactaagctgcatgagtcg 38801483  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #22
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 50686681 - 50686635
Alignment:
Q  171 actgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||  ||||||||||||||||| ||||||||||||||    
T  50686681 actgcctatgttgccgtttgtttattaactaaactgcatgagtcggt 50686635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #23
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 45574932 - 45574984
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  45574932 tttgcatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 45574984  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #24
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 16093934 - 16093982
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| | ||||||||||||||| | |||||||||||||    
T  16093934 atactgcctatgttgctatttgtttattaactatgttgcatgagtcggt 16093982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #25
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 21533923 - 21533969
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||| |||||||||||| ||||| ||||||||||||||||||||||    
T  21533923 tactgcgtatgttgttgtt-gtttagtaactaagctgcatgagtcggt 21533969  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #26
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 64 - 102
Target Start/End: Complemental strand, 49261519 - 49261481
Alignment:
Q  64 taatgttgcttataatgttatataattgtatatacatta 102  Q
    |||||||| | ||||||||||||||||||||||||||||    
T  49261519 taatgttgatgataatgttatataattgtatatacatta 49261481  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 34509856 - 34509804
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  34509856 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 34509804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 50210258 - 50210310
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  50210258 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 50210310  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr1; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 215
Target Start/End: Complemental strand, 21161817 - 21161742
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 215  Q
    |||||||||| ||||||||  ||| |||||||||||  | ||||| ||||||||  ||||||||| |||||||||||    
T  21161817 attcgatattgttatatcacgatgatttgcatactgttt-tgttgctgtttgttgtttaactaagttgcatgagtcg 21161742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6 (Bit Score: 165; Significance: 2e-88; HSPs: 30)
Name: chr6
Description:

Target: chr6; HSP #1
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 28496360 - 28496568
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  28496360 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatgac 28496459  T
Q  109 ttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgca 208  Q
    ||| |||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |  |||||  ||||||||||||||    
T  28496460 ttatgtttgatatttgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctaattgttatttaactaagctgca 28496559  T
Q  209 tgagtcggt 217  Q
    |||||||||    
T  28496560 tgagtcggt 28496568  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #2
Raw Score: 165; E-Value: 2e-88
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 29808771 - 29808979
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  29808771 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcatatgaattaatgttgcttataatgttatataattgtatatacattacatgac 29808870  T
Q  109 ttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgca 208  Q
    ||| |||||||| |||||||| ||||||| |||||||||||||||||||| |||||||||||||||||||||||| |  |||||  ||||||||||||||    
T  29808871 ttatgtttgatatttgagttgttgatttacattcgatattattatatcatgatggtttgcatactgcctatgttgctaattgttatttaactaagctgca 29808970  T
Q  209 tgagtcggt 217  Q
    |||||||||    
T  29808971 tgagtcggt 29808979  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #3
Raw Score: 147; E-Value: 1e-77
Query Start/End: Original strand, 1 - 214
Target Start/End: Complemental strand, 1561544 - 1561330
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaatt-aatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||||||||||| |||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  1561544 gaggttagaaactaagttgtttatcttgctgttaatattccagtaagactgatgcatatgaatttaatgttgcttataatgttatataattgtatataca 1561445  T
Q  100 ttacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaac 199  Q
    |||||||||||| |||||||| |||||||| ||||||  |||||||||||||||||||| |||||||||||||| ||||| ||||| ||||||  |||||    
T  1561444 ttacatgacttatgtttgatatttgagttgttgatttgcattcgatattattatatcatgatggtttgcatactacctatattgttatttgttatttaac 1561345  T
Q  200 taagctgcatgagtc 214  Q
    |||||||||||||||    
T  1561344 taagctgcatgagtc 1561330  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #4
Raw Score: 108; E-Value: 2e-54
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 19652436 - 19652219
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||||| |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||| |    
T  19652436 gaggttagaaactaagttgtttatcttgctgttattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatactt 19652337  T
Q  101 tacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaa 198  Q
    || |||  ||| | |||||  ||||| || || |  ||  |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||||    
T  19652336 taaatggattatg-ttgatgtttgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttgtttaa 19652238  T
Q  199 ctaagctgcatgagtcggt 217  Q
    |||||||||||||||||||    
T  19652237 ctaagctgcatgagtcggt 19652219  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 23019649 - 23019430
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||||  |||| ||||||| ||||    ||| |  |||||| | |  |||||||||||||||||||||||||    
T  23019649 gaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaactatataatctaatgtcgttgttaatgttatataattgtatatacat 23019550  T
Q  101 tacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||  |||||   ||| ||| ||  ||| |||||| |||||||||  || |||||||||||| ||||||| |||||||||||||    
T  23019549 tacatgaattatgtttgatgtttgagatgttgttgacttgcatttgatattgttatatcatgttgttttgcatactgcttatgttgctgtttgtttatta 23019450  T
Q  198 actaagctgcatgagtcggt 217  Q
    |||||||||||| |||||||    
T  23019449 actaagctgcataagtcggt 23019430  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #6
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 19668607 - 19668395
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||||||||  |||| ||||||| ||||||  |||||  || ||||| | ||||||||||||| |||||||||||||||||||     
T  19668607 aaactaagttgtttatcttgctgttgttgtttcagtaagtctgatgtatatgatgtagtgttgttgataatgttatatagttgtatatacattacatgaa 19668508  T
Q  109 ttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    ||| || ||||  | ||| |||| ||||||  ||| |||||| ||||||||| |  || ||||||||||  |||||||| |||||||| |||||||||||    
T  19668507 ttacgtatgatgttgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgcatactatctatgttgctgtttgttaattaactaagc 19668408  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  19668407 tgcatgagtcggt 19668395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #7
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 20109376 - 20109162
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataat--tgtatatacattacatg 106  Q
    ||||||||||||||| ||||||| |    ||| |||||||||||||  ||| |||| |||||| ||||||||| |||||||  |||||||||||||| ||    
T  20109376 aaactaagttgtttatcttgctgatgtctttctagtaagactgatgtatatcaattgatgttgtttataatgtgatataatattgtatatacattacttg 20109277  T
Q  107 acttaagtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaa 202  Q
    | |||  | ||| || ||||| || ||||   ||  ||| |||||| |||||| ||  || |||||||||||||||||||| ||||||||||||||||||    
T  20109276 aattatatatgaatatttgagatgttgatgacttgcatttgatattgttatattatgttgttttgcatactgcctatgttgctgtttgtttattaactaa 20109177  T
Q  203 gctgcatgagtcggt 217  Q
    |||||||||||||||    
T  20109176 gctgcatgagtcggt 20109162  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #8
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 27333238 - 27333315
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  27333238 ttcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 27333315  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #9
Raw Score: 54; E-Value: 3e-22
Query Start/End: Original strand, 140 - 217
Target Start/End: Original strand, 27393978 - 27394055
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  27393978 ttcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 27394055  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #10
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 23076801 - 23076754
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  23076801 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 23076754  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #11
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 35008219 - 35008172
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||||||||||||||||||||||||||    
T  35008219 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 35008172  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #12
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 9098466 - 9098611
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcata 171  Q
    ||||||||||||||| |||||||||||||||| ||| |||||||  | ||| |||| |||  |  ||| |||||| ||||||||| |  || ||||||||    
T  9098466 taatgttatataattatatatacattacatgaattatgtttgatgttgtgaagttgttgaaatgcatttgatattgttatatcatgaattgttttgcata 9098565  T
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||| ||||| ||||||||  |||||||||||||||||||||||    
T  9098566 ctgcctttgttgctgtttgttatttaactaagctgcatgagtcggt 9098611  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #13
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 4185840 - 4185918
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||| ||||||||| |||  ||||||||||||||||||| ||| ||||  ||||||| |||||||||||||||    
T  4185840 attcgatattgttatatcatgatgagttgcatactgcctatgttgctgtctgttgtttaactatgctgcatgagtcggt 4185918  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #14
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 35245658 - 35245610
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  35245658 atactgcctatgttggtgtttgttaattaactaagctgcatgagtcggt 35245610  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #15
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 8227533 - 8227608
Alignment:
Q  142 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| ||| ||||||||||||||| |||| || |  || | ||||||||||||||||||||||    
T  8227533 cgatattattatatcatgatgttttgcatactgcctacgttgctgatcattaactaactaagctgcatgagtcggt 8227608  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #16
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 25644397 - 25644344
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||| ||| ||||  |||||||||||||||||||||||    
T  25644397 tttgcatactgcctatgttgctgtctgttatttaactaagctgcatgagtcggt 25644344  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #17
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 33443118 - 33443071
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||| ||||||||||||||||||||||||||||    
T  33443118 atactgcctatgttgctgtt-gtttattaactaagctgcatgagtcggt 33443071  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #18
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 4186469 - 4186391
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||| ||||||||| |||  |||||||||| |||||||| ||  ||||  ||||||| |||||||||||||||    
T  4186469 attcgatattgttatatcatgatgagttgcatactgtctatgttgctgcctgttgtttaactatgctgcatgagtcggt 4186391  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #19
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 16920679 - 16920727
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||| || ||||||||  |||||||||||||||||||||||    
T  16920679 atactgcctatgctgctgtttgttatttaactaagctgcatgagtcggt 16920727  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #20
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 173 - 217
Target Start/End: Complemental strand, 22831571 - 22831527
Alignment:
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||||||  |||||||||||||||||||||||    
T  22831571 tgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 22831527  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #21
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 178 - 217
Target Start/End: Complemental strand, 11185568 - 11185529
Alignment:
Q  178 atgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||  |||||||||||||||||||||||    
T  11185568 atgttgttgtttgttatttaactaagctgcatgagtcggt 11185529  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #22
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 139 - 182
Target Start/End: Original strand, 22080757 - 22080800
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgtt 182  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||    
T  22080757 attcgatattgttatatcatgatgttttgcatactgcctatgtt 22080800  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #23
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 19303564 - 19303637
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| ||||| ||| |||||||||| |||  |||||||||||||||||||||||    
T  19303564 gatattattatgtcatgttgttttgtatacttcctgtgttgttgtt-gttatttaactaagctgcatgagtcggt 19303637  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #24
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 20076797 - 20076724
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || ||||  |||||||||||||| |||| |||  |||||||||||||||||||||||    
T  20076797 gatattattatgtcatgctgttttgtttactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 20076724  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #25
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 9 - 111
Target Start/End: Complemental strand, 35008385 - 35008283
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||| ||| ||| |||||| |||| ||||||| |||||    |||| || |||||| | ||||||| ||||| |||||||| ||||||||||     
T  35008385 aaactaagttgcttatcttactgttattgtttcagtaagcctgatatagatgatttgatgttgttaataatgtgatatatttgtatattcattacatgaa 35008286  T
Q  109 tta 111  Q
    |||    
T  35008285 tta 35008283  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #26
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 16496320 - 16496268
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  16496320 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 16496268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #27
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 213
Target Start/End: Original strand, 20638328 - 20638376
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagt 213  Q
    |||| |||||||||||||||||| |||||  |||||||||||||||||||    
T  20638328 tttgtatactgcctatgttgttg-ttgttatttaactaagctgcatgagt 20638376  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #28
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 29060616 - 29060564
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  29060616 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 29060564  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #29
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 4668230 - 4668274
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttg 183  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  4668230 attcgatattgttatatcatgatgagttgcatactgcctatgttg 4668274  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr6; HSP #30
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Original strand, 4675077 - 4675121
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttg 183  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  4675077 attcgatattgttatatcatgatgagttgcatactgcctatgttg 4675121  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4 (Bit Score: 163; Significance: 3e-87; HSPs: 24)
Name: chr4
Description:

Target: chr4; HSP #1
Raw Score: 163; E-Value: 3e-87
Query Start/End: Original strand, 1 - 203
Target Start/End: Complemental strand, 16596888 - 16596686
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||    
T  16596888 gaggttagaaactaagttgtttaccttgctgttaatgttcaagtaagactgatgcttataaattaatgttgcttataatgttatataattgtatatacat 16596789  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||| ||||||||| ||||||||  ||||||    
T  16596788 tacatgacttaagtttgataattgagttgatgatttacattcgatattattatatcatgatggtttgcatactacctatgttgctgtttgttatttaact 16596689  T
Q  201 aag 203  Q
    |||    
T  16596688 aag 16596686  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #2
Raw Score: 161; E-Value: 5e-86
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 15552056 - 15551841
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||| ||| |||||||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||    
T  15552056 gaggttagaaactaagttgtt-accctgctgttaatgtcccagtaagactgatgcttatgaatcaatgttgcttataatgttatataattgtatatacat 15551958  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||||||||||||||||||||| |||||||  ||||||||||||||||||| |||| ||||||||||||||||||| ||||||||  ||||||    
T  15551957 tacatgacttaagtttgataattgagttgttgatttaccttcgatattattatatcatgatggattgcatactgcctatgttgctgtttgttatttaact 15551858  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  15551857 aagctgcatgagtcggt 15551841  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #3
Raw Score: 91; E-Value: 3e-44
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 13736 - 13948
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||  |||| |||||||||||||||||||| |||||| || |||||| ||||||||| ||||||||||||||||||||| |||     
T  13736 aaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgatgttgtttataatgtgatataattgtatatacattacttgaa 13835  T
Q  109 ttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    |||  | || ||| ||||   |||| ||| ||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||||||||||||||    
T  13836 ttatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagc 13935  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  13936 tgcatgagtcggt 13948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #4
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 12774240 - 12774031
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||||  |||||||||||||||||||| |||||||| |||||| ||||||||||        ||||||||||    
T  12774240 gaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgtt--------gtatatacat 12774149  T
Q  101 tacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaa 198  Q
    || |||  ||| ||| |||||||||| || || |  || ||||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||    
T  12774148 taaatggattatgtt-gataattgagatgttgttgattgtattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaa 12774050  T
Q  199 ctaagctgcatgagtcggt 217  Q
    |||||||||||||||||||    
T  12774049 ctaagctgcatgagtcggt 12774031  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #5
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 126
Target Start/End: Complemental strand, 8846607 - 8846490
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| ||||  |||  |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||     
T  8846607 aaactaagttgtttatcttgtagttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaa 8846508  T
Q  109 ttaagtttgataattgag 126  Q
    ||| |||||||| |||||    
T  8846507 ttatgtttgatatttgag 8846490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #6
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 12288095 - 12288307
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||||||||  |||| ||||||| ||||    ||||| ||||||||| |  |||||||||||| |||||||||||||||||||     
T  12288095 aaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatatgatttaatgttgttggtaatgttatatagttgtatatacattacatgaa 12288194  T
Q  109 ttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    ||| |||||||  | ||| |||| ||| ||  ||| |||||| ||||||||| |  ||||||||||||||||||||||| ||||||||  ||||||||||    
T  12288195 ttatgtttgatgttgtgatgttgttgaattgcatttgatattgttatatcatgaactggtttgcatactgcctatgttgctgtttgttatttaactaagc 12288294  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  12288295 tgcatgagtcggt 12288307  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #7
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 43198430 - 43198652
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||| ||||||||||||||||| |||| |||| |||||||||||||||| |||| |||||||| |||||| ||||||||| ||||||||||||||||||    
T  43198430 gaggtaaaaaactaagttgtttatcttgttgttgatgttccagtaagactaatgcatatgaattgatgttgtttataatgtgatataattgtatatacat 43198529  T
Q  101 tacatgacttaagtttg-ataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgttta 194  Q
    ||| ||| |||  | || ||| |||||   ||| ||| ||  ||| |||||  ||||||||| |  || |||||||| || |||||||| ||||||||      
T  43198530 tacttgaattatatatgaatatttgagatattgatgacttgcatttgatatggttatatcatgaattgttttgcatattgtctatgttgctgtttgttat 43198629  T
Q  195 ttaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||||    
T  43198630 ttaactaagctgcatgagtcggt 43198652  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #8
Raw Score: 68; E-Value: 2e-30
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 39706179 - 39706385
Alignment:
Q  13 taagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaa 112  Q
    ||||||||||| |||||||||  ||||  |||||| ||||    |||||  |||||||| |  |||||||||||||||||||||||||||||||| |||     
T  39706179 taagttgtttatcttgctgttgttgttttagtaagcctgaattatatgatctaatgttgttgctaatgttatataattgtatatacattacatgaattat 39706278  T
Q  113 gtt--tgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatg 210  Q
    |||  || | ||   |||  ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||||||||||||||||    
T  39706279 gttgatgtttatgatgttcatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatg 39706378  T
Q  211 agtcggt 217  Q
    |||||||    
T  39706379 agtcggt 39706385  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #9
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 139 - 217
Target Start/End: Complemental strand, 8846458 - 8846380
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||| |||| |||| ||| |||||||||||||||||||| ||||||||  |||||||||||| || |||||||    
T  8846458 attcgatattgttatctcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgaataagtcggt 8846380  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #10
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 52243240 - 52243293
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  52243240 tttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 52243293  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #11
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 46640505 - 46640553
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||| |||||||| |||||||||||||||||||||||||||||||||    
T  46640505 atactgtctatgttgctgtttgtttattaactaagctgcatgagtcggt 46640553  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #12
Raw Score: 40; E-Value: 0.00000000000008
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 53082202 - 53082249
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||| ||||||| |||||||||||||||||||||||||||||||||    
T  53082202 tactgcttatgttgctgtttgtttattaactaagctgcatgagtcggt 53082249  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #13
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 17046559 - 17046511
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||| ||||||||| ||||||||  |||||||||||||||||||||||    
T  17046559 atactacctatgttgctgtttgttatttaactaagctgcatgagtcggt 17046511  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #14
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 15099528 - 15099485
Alignment:
Q  64 taatgttgcttataatgttatataattgtatatacattacatga 107  Q
    |||||||| | |||||||||||||||||||||||||||| ||||    
T  15099528 taatgttgatgataatgttatataattgtatatacattatatga 15099485  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #15
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 107
Target Start/End: Complemental strand, 15190495 - 15190452
Alignment:
Q  64 taatgttgcttataatgttatataattgtatatacattacatga 107  Q
    |||||||| | |||||||||||||||||||||||||||| ||||    
T  15190495 taatgttgatgataatgttatataattgtatatacattatatga 15190452  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #16
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 163 - 217
Target Start/End: Original strand, 16377565 - 16377618
Alignment:
Q  163 gtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  16377565 gtttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 16377618  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #17
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 3096369 - 3096317
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  3096369 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 3096317  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #18
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 6190531 - 6190486
Alignment:
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||| |||||| |  |||||||||||||||||||||||    
T  6190531 ctgcctatgttgctgtttgatgtttaactaagctgcatgagtcggt 6190486  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #19
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 7088953 - 7088901
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  7088953 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 7088901  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #20
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 7798850 - 7798798
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  7798850 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 7798798  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #21
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 12902833 - 12902781
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  12902833 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 12902781  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #22
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 52873412 - 52873464
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  52873412 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 52873464  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #23
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 163 - 215
Target Start/End: Original strand, 14053344 - 14053396
Alignment:
Q  163 gtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 215  Q
    ||||| |||||| ||||| |||||||||||  ||||||||| |||||||||||    
T  14053344 gtttgtatactgtctatgctgttgtttgttatttaactaagttgcatgagtcg 14053396  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr4; HSP #24
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 170 - 214
Target Start/End: Complemental strand, 17333347 - 17333304
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||| |||||||| |||| |||||||||||||||||||||||||    
T  17333347 tactgtctatgttgctgtt-gtttattaactaagctgcatgagtc 17333304  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0161 (Bit Score: 150; Significance: 2e-79; HSPs: 1)
Name: scaffold0161
Description:

Target: scaffold0161; HSP #1
Raw Score: 150; E-Value: 2e-79
Query Start/End: Original strand, 1 - 186
Target Start/End: Original strand, 2323 - 2508
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  2323 gaggttagaaactaagttttttaccttgctattaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 2422  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttg 186  Q
    || |||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||| | ||| |||||||    
T  2423 taaatgacttaagtttgataattgagttgctgatttacattcgatattattatatcatgatggtttgcatacggtctaagttgttg 2508  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218 (Bit Score: 149; Significance: 7e-79; HSPs: 2)
Name: scaffold0218
Description:

Target: scaffold0218; HSP #1
Raw Score: 149; E-Value: 7e-79
Query Start/End: Original strand, 1 - 192
Target Start/End: Original strand, 29158 - 29352
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat---gttatataattgtatata 97  Q
    ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||   ||||||||||||||||||    
T  29158 gaggttagaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataattatgttatataattgtatata 29257  T
Q  98 cattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtt 192  Q
    || ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| || ||||| ||||| ||||||||| ||||||||    
T  29258 cagtacatgacttaagtttgataattgagttgctgatttacattcgatattattatatcatgatagtttgaatactacctatgttgctgtttgtt 29352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0218; HSP #2
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 7962 - 8171
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||||||||   ||| ||||||| ||||    ||||| ||||||||| | ||||||||||||| |||||||||||||||||||     
T  7962 aaactaagttgtttatcttgctgtt---gtttcagtaagcctgaattatatgatttaatgttgttgataatgttatatagttgtatatacattacatgaa 8058  T
Q  109 ttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    |||  | ||||  | ||| |||| |||||| |||| |||||| ||||||||| |  ||||||| ||||||||||||||| ||||||||| ||||||||||    
T  8059 ttatatatgatgttgtgatgttgttgatttgtatttgatattgttatatcatgaactggtttgtatactgcctatgttgctgtttgtttgttaactaagc 8158  T
Q  205 tgcatgagtcggt 217  Q
    |||||||||||||    
T  8159 tgcatgagtcggt 8171  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556 (Bit Score: 141; Significance: 4e-74; HSPs: 2)
Name: scaffold0556
Description:

Target: scaffold0556; HSP #1
Raw Score: 141; E-Value: 4e-74
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 7052 - 6836
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||||  |||||||||||||||||||| ||||||||||||||| ||||||||||||||||||||||||||||    
T  7052 gaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattaatgttgtttataatgttatataattgtatatacat 6953  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    ||||||||||| |||||||| |||||||| ||||||  |||| ||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||||    
T  6952 tacatgacttatgtttgatatttgagttgttgatttgcattcaatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaact 6853  T
Q  201 aagctgcatgagtcggt 217  Q
     ||||||||||||||||    
T  6852 gagctgcatgagtcggt 6836  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0556; HSP #2
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 10 - 119
Target Start/End: Complemental strand, 8249 - 8140
Alignment:
Q  10 aactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgact 109  Q
    |||||||||||||| | |||||||  |||| ||||||| ||||    ||| |  |||||||| |  |||||||||||||||||||||||||||||||| |    
T  8249 aactaagttgtttatcctgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgttatataattgtatatacattacatgaat 8150  T
Q  110 taagtttgat 119  Q
    || |||||||    
T  8149 tatgtttgat 8140  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3 (Bit Score: 138; Significance: 3e-72; HSPs: 33)
Name: chr3
Description:

Target: chr3; HSP #1
Raw Score: 138; E-Value: 3e-72
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 13210207 - 13210424
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaatt-aatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||| ||||||  |||||||||| ||||||| |||||||| |||||||||||||||||||||||||||||||||||    
T  13210207 gaggttagaaactaagttgtttatcttgttgttaacattccagtaaggctgatgcatatgaattcaatgttgcttataatgttatataattgtatataca 13210306  T
Q  100 ttacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaac 199  Q
    |||||||||||| |||||||| || ||||| ||||||  |||||||||||||||||||| |||||||||||||||||||||||| | ||||||  |||||    
T  13210307 ttacatgacttatgtttgatatttaagttgttgatttgcattcgatattattatatcatgatggtttgcatactgcctatgttgctatttgttatttaac 13210406  T
Q  200 taagctgcatgagtcggt 217  Q
    ||||||||||||||||||    
T  13210407 taagctgcatgagtcggt 13210424  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #2
Raw Score: 133; E-Value: 2e-69
Query Start/End: Original strand, 13 - 217
Target Start/End: Original strand, 12174152 - 12174356
Alignment:
Q  13 taagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgacttaa 112  Q
    ||||||||||| |||||||||  |||||||||||||||||||| ||||||| ||||||| |||||||||||||||||||||||||||||||||||||||     
T  12174152 taagttgtttagcttgctgttgttgttccagtaagactgatgcatatgaatcaatgttgtttataatgttatataattgtatatacattacatgacttat 12174251  T
Q  113 gtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgag 212  Q
    |||||||| |||||||| || |||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||||||||||||||||    
T  12174252 gtttgatatttgagttgttgttttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctgcatgag 12174351  T
Q  213 tcggt 217  Q
    |||||    
T  12174352 tcggt 12174356  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #3
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 16097563 - 16097352
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||||||||  |||||||||||||||||||| |||||||| |||||| |||||||||||||||||||||||||||||||||||     
T  16097563 aaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacattacatgaa 16097464  T
Q  109 ttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagct 205  Q
    ||| |||||||| ||||   |||| ||| ||  |||||||||| |||||| || ||| |||||||| ||||||||||||||||||||  |||||||||||    
T  16097463 ttatgtttgatatttgagatgttgatgacttgcattcgatattgttatatgatgatgatttgcatattgcctatgttgttgtttgttatttaactaagct 16097364  T
Q  206 gcatgagtcggt 217  Q
    ||||||||||||    
T  16097363 gcatgagtcggt 16097352  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #4
Raw Score: 104; E-Value: 5e-52
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 16104022 - 16103804
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||||  ||||||||||||||| || | |||||||| |||||| |||||||||||||||||| |||||||||    
T  16104022 gaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactaatccatatgaattgatgttgtttataatgttatataattttatatacat 16103923  T
Q  101 tacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaa 198  Q
    || |||| ||| |||||||| ||||| || || |  ||  |||||||||| ||||||||| ||| |||||||||||||||||||| |||| |||  ||||    
T  16103922 taaatgaattatgtttgatatttgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgttcgttgtttaa 16103823  T
Q  199 ctaagctgcatgagtcggt 217  Q
    |||||||||||||||||||    
T  16103822 ctaagctgcatgagtcggt 16103804  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #5
Raw Score: 87; E-Value: 7e-42
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 32307910 - 32307701
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||| | ||||| |||||||||||||||||||||||||||||| ||||||||        ||||||||||||    
T  32307910 gaggttagaaactaagttgtttatcttgctgtcattgttctagtaagactgatgcttatgaattaatgttgtttataatg--------ttgtatatacat 32307819  T
Q  101 tacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaa 198  Q
    || |||  ||| | |||||||||||| || || |  ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||    
T  32307818 taaatggattatg-ttgataattgagatgttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaa 32307720  T
Q  199 ctaagctgcatgagtcggt 217  Q
    |||||||||||||||||||    
T  32307719 ctaagctgcatgagtcggt 32307701  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #6
Raw Score: 84; E-Value: 4e-40
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 9513150 - 9512944
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| ||||||||        || |||||||||    
T  9513150 gaggttagaaactaagttgtttaccttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatg--------ttttatatacat 9513059  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    || |||  ||| | ||||||| |||| || ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||||    
T  9513058 taaatggattatg-ttgataaatgagatgttga-ttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttgtttaact 9512961  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  9512960 aagctgcatgagtcggt 9512944  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #7
Raw Score: 80; E-Value: 1e-37
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 9521125 - 9520919
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||||||||||||| ||||| |||||||||||||||||||| |||||||| |||||| ||||||||        |  |||||||||    
T  9521125 gaggttagaaactaagttgtttaccttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatg--------tgttatatacat 9521034  T
Q  101 tacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaact 200  Q
    || |||  ||| | ||||||| |||| || ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||||    
T  9521033 taaatggattatg-ttgataaatgagatgttga-ttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttgtttaact 9520936  T
Q  201 aagctgcatgagtcggt 217  Q
    |||||||||||||||||    
T  9520935 aagctgcatgagtcggt 9520919  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #8
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 1 - 126
Target Start/End: Original strand, 49389508 - 49389633
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||| ||||  |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  49389508 gaggttagaaactaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacat 49389607  T
Q  101 tacatgacttaagtttgataattgag 126  Q
    || |||| ||| |||||||| |||||    
T  49389608 taaatgaattatgtttgatagttgag 49389633  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #9
Raw Score: 74; E-Value: 4e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 15471166 - 15470948
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||| ||||  |||| ||||||| ||||    |||||  ||| |||| |  |||||||||||||||||||||||||    
T  15471166 gaggttagaaactaagttgtttatcttgttgttgttgtttcagtaagcctgaattatatgatctaa-gttgttgttaatgttatataattgtatatacat 15471068  T
Q  101 tacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||  ||||| || ||||   ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||| ||||  |||    
T  15471067 tacatgaattatgtttgatgtttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtctgttattta 15470968  T
Q  198 actaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||    
T  15470967 actaagctgcatgagtcggt 15470948  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #10
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 188
Target Start/End: Original strand, 1644562 - 1644742
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||| ||||| |||||||||||||||||||| |||||||| |||||| ||||||||        ||||||||||||    
T  1644562 gaggttagaaactaagttgtttatcttgttgttattgttccagtaagactgatgcatatgaattgatgttgtttataatg--------ttgtatatacat 1644653  T
Q  101 tacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtt 188  Q
    || |||  ||| | ||||||||||||   ||| ||| || ||||||||||| |||||| || ||| |||||||||||||||||||||||||    
T  1644654 taaatggattatg-ttgataattgagatattgttga-ttgtattcgatattgttatataatgatgatttgcatactgcctatgttgttgtt 1644742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #11
Raw Score: 61; E-Value: 2e-26
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 49667963 - 49668173
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||| | |||||||||||||||||||| ||||| || ||||||  ||||||| |        |||||||| |    
T  49667963 gaggttagaaactaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgagttgatgttgtatataatgct--------gtatatactt 49668054  T
Q  101 tacatgacttaagtttgataattgagttgctgatttat---attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    || |||  ||| ||| ||||| |||| || |  || ||   |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  |||    
T  49668055 taaatggattatgtt-gataaatgagatgtttgttgattgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttattta 49668153  T
Q  198 actaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||    
T  49668154 actaagctgcatgagtcggt 49668173  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #12
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 76 - 211
Target Start/End: Complemental strand, 14234655 - 14234517
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| |||||||||    
T  14234655 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatac 14234556  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatga 211  Q
    ||||||||||| || |||||  |||||||||||||||||    
T  14234555 tgcctatgttgctgcttgttatttaactaagctgcatga 14234517  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #13
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 37251053 - 37251265
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| ||| |||||  |||||||||||| ||||    ||||| || |||||| | ||||||| |||||| ||||||| ||||||||||     
T  37251053 aaactaagttgtttatcttactgttgttgttccagtaagtctgaattatatgatttgatgttgttaataatgtgatataaatgtatatgcattacatgaa 37251152  T
Q  109 ttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
    |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||||||| |  || |||  ||||||||||||||| |||||||||||||||||||    
T  37251153 ttatttatgatg-ttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatatactgcctatgttgctgtttgtttattaactaag 37251251  T
Q  204 ctgcatgagtcggt 217  Q
    |||||||| |||||    
T  37251252 ctgcatgactcggt 37251265  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #14
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 66 - 217
Target Start/End: Original strand, 52523669 - 52523826
Alignment:
Q  66 atgttgcttataatgttatataattgtatatacattacatgacttaagtttga-taattgag---ttgctgatttatattcgatattattatatcatta- 160  Q
    |||||| ||||||||| |||||||||||||| |||||| ||| |||  | ||| |  |||||   ||| ||||||  |||||||||| ||||||||| |     
T  52523669 atgttgtttataatgtgatataattgtatatgcattacttgaattatatatgaatgtttgagatgttgttgatttgcattcgatattgttatatcatgaa 52523768  T
Q  161 -tggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
     || |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  52523769 ctgttttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 52523826  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #15
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 1 - 79
Target Start/End: Original strand, 12934190 - 12934268
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataat 79  Q
    ||||||| ||||||||||||||| |||||||| | |||||||||||||||||||| |||||||| |||||| |||||||    
T  12934190 gaggttagaaactaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttataat 12934268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #16
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 140 - 214
Target Start/End: Complemental strand, 23274788 - 23274714
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||| ||||||||||    
T  23274788 ttcgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagttgcatgagtc 23274714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #17
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 24340743 - 24340817
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||||| ||| | |||||||||| ||||||| || ||||| |||||||||||||||||||||    
T  24340743 ttcgatattattatatcatgatgttgtgcatactgcatatgttgctgattgttaattaactaagctgcatgagtc 24340817  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #18
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 217
Target Start/End: Original strand, 22110402 - 22110449
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  22110402 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 22110449  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #19
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 37642287 - 37642362
Alignment:
Q  142 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || |  || | ||||||||||||||||||||||    
T  37642287 cgatattattatatcatgatgttttgcatactgcctatgttgctgatcattaactaactaagctgcatgagtcggt 37642362  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #20
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 43926029 - 43925982
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||| |||||||||||||||||||||||||||||||||    
T  43926029 tactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 43925982  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #21
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 606378 - 606423
Alignment:
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  606378 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 606423  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #22
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 12377993 - 12377945
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| ||||||| |||||||||||||| ||||||||||    
T  12377993 atactgcctatgttgctgtttgtctattaactaagctgtatgagtcggt 12377945  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #23
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 151 - 217
Target Start/End: Complemental strand, 27165337 - 27165271
Alignment:
Q  151 tatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||  || ||||||||||| |||| ||| ||||||||  |||||||||||||||||||||||    
T  27165337 tatatcatgttgttttgcatactgtctatattgctgtttgttatttaactaagctgcatgagtcggt 27165271  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #24
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 53301574 - 53301648
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||| |||||||||  || ||||||||||| |||||||| ||||||||  ||||||||| || ||||||||||    
T  53301574 gatattgttatatcatgttgttttgcatactgtctatgttgctgtttgttatttaactaagttgtatgagtcggt 53301648  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #25
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 26686963 - 26686911
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  26686963 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 26686911  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #26
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 64 - 107
Target Start/End: Original strand, 1465352 - 1465395
Alignment:
Q  64 taatgttgcttataatgttatataattgtatatacattacatga 107  Q
    |||||||| | ||||||||||| |||||||||||||||||||||    
T  1465352 taatgttgatgataatgttatacaattgtatatacattacatga 1465395  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #27
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 13919399 - 13919353
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||| |||| ||||||||||||||||||||||||||||    
T  13919399 tactccctatgttgctgtt-gtttattaactaagctgcatgagtcggt 13919353  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #28
Raw Score: 32; E-Value: 0.000000005
Query Start/End: Original strand, 142 - 217
Target Start/End: Original strand, 22147547 - 22147622
Alignment:
Q  142 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| ||| ||||||||| ||||| |||| || |  || | |||||||||||||||| |||||    
T  22147547 cgatattattatatcatgatgttttgcataccgcctacgttgctgatcattaactaactaagctgcatgactcggt 22147622  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #29
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 14572686 - 14572613
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| |||||| |||||||| |||| |||  |||||||||||||||||||||||    
T  14572686 gatattattatgtcatgctgttttgtatactgtctatgttgctgtt-gttatttaactaagctgcatgagtcggt 14572613  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #30
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 12399285 - 12399233
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  12399285 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 12399233  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #31
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 20698480 - 20698532
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  20698480 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 20698532  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #32
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 176 - 217
Target Start/End: Complemental strand, 28194755 - 28194714
Alignment:
Q  176 ctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||| ||||||||  |||||||||||||||||||||||    
T  28194755 ctatgttgctgtttgttatttaactaagctgcatgagtcggt 28194714  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: chr3; HSP #33
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 43841008 - 43840956
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||| ||||||||||||| |||  |||||||||||||||||||||||    
T  43841008 tttgtatactgtctatgttgttgtt-gttatttaactaagctgcatgagtcggt 43840956  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0184 (Bit Score: 121; Significance: 4e-62; HSPs: 1)
Name: scaffold0184
Description:

Target: scaffold0184; HSP #1
Raw Score: 121; E-Value: 4e-62
Query Start/End: Original strand, 73 - 217
Target Start/End: Original strand, 1022 - 1166
Alignment:
Q  73 ttataatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||| |||||||||||||||||||| |||||||||||||    
T  1022 ttataatgttatataattgtatatacattacatgacttaagtctgataattgagttgttgatttacattcgatattattatatcatgatggtttgcatac 1121  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  1122 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 1166  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0555 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0555
Description:

Target: scaffold0555; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 10419 - 10638
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||| ||||  |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  10419 gaggttagaaactaagttgtttatcttgttgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacat 10518  T
Q  101 tacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  |||    
T  10519 tacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttattta 10618  T
Q  198 actaagctgcatgagtcggt 217  Q
    |||||||||||| |||||||    
T  10619 actaagctgcataagtcggt 10638  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0125 (Bit Score: 118; Significance: 2e-60; HSPs: 1)
Name: scaffold0125
Description:

Target: scaffold0125; HSP #1
Raw Score: 118; E-Value: 2e-60
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 45670 - 45889
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| |||||||||||||||  ||||||| | |||||||||||||||||||| |||||||| |||||| ||||||||||||||||||||||||||||    
T  45670 gaggttagaaactaagttgtttatattgctgtaattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatacat 45769  T
Q  101 tacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
     |||||| ||| |||||||||||||   |||| ||| ||| |||||||||| ||||||||| ||| |||||||||||||||| ||  ||||||||  |||    
T  45770 cacatgaattatgtttgataattgagatgttgatgacttacattcgatattgttatatcatgatgatttgcatactgcctatttttctgtttgttattta 45869  T
Q  198 actaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||    
T  45870 actaagctgcatgagtcggt 45889  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010 (Bit Score: 114; Significance: 5e-58; HSPs: 2)
Name: scaffold0010
Description:

Target: scaffold0010; HSP #1
Raw Score: 114; E-Value: 5e-58
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 130148 - 129929
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||||||||  |||||||||||||||||||| |||||||| |||||| ||| ||||||||||||||||||||||||    
T  130148 gaggttagaaactaagttgtttatcttgctgttgttgttccagtaagactgatgcatatgaattgatgttgtttacaatgttatataattgtatatacat 130049  T
Q  101 tacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||| ||||   |||| ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||| ||||  |||    
T  130048 tacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtgtgttattta 129949  T
Q  198 actaagctgcatgagtcggt 217  Q
    |||||| |||||||||||||    
T  129948 actaagatgcatgagtcggt 129929  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0010; HSP #2
Raw Score: 46; E-Value: 2e-17
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 60760 - 60813
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  60760 tttgtatactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 60813  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1984 (Bit Score: 102; Significance: 8e-51; HSPs: 1)
Name: scaffold1984
Description:

Target: scaffold1984; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 371 - 153
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||| ||||||| | |||||||||  ||||| ||| |||||||| | |||||||| |||||| ||||||| ||||||||||||||||||||    
T  371 gaggttagaaactgagttgtt-atcttgctgttgttgttctagtgagactgatacatatgaattgatgttgtttataatattatataattgtatatacat 273  T
Q  101 tacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  |||    
T  272 tacatgaattatgtttgatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttgttta 173  T
Q  198 actaagctgcatgagtcggt 217  Q
    |||||||||||||| |||||    
T  172 actaagctgcatgaatcggt 153  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001 (Bit Score: 102; Significance: 8e-51; HSPs: 2)
Name: scaffold0001
Description:

Target: scaffold0001; HSP #1
Raw Score: 102; E-Value: 8e-51
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 160926 - 160708
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| |||| ||||  |||| | ||||||||||||| |||||||| |||||| ||||||||||||||||||||||||| ||    
T  160926 gaggttagaaactaagttgtttatcttgttgttgttgtttcggtaagactgatgcatatgaattgatgttgtttataatgttatataattgtatatatat 160827  T
Q  101 tacatgacttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||||||| |||||||| ||||   |||| ||| ||  ||| |||||| ||||||||| ||| |||||||||||||||||||| || |||||  |||    
T  160826 tacatgacttatgtttgatatttgacatgttgttga-ttgcatttgatattgttatatcatgatgatttgcatactgcctatgttgctgattgttattta 160728  T
Q  198 actaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||    
T  160727 actaagctgcatgagtcggt 160708  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0001; HSP #2
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 497494 - 497450
Alignment:
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| || |||||||||||||||||| ||||||    
T  497494 ctgcctatgttgttgtt-gtatattaactaagctgcatgtgtcggt 497450  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0037 (Bit Score: 93; Significance: 2e-45; HSPs: 1)
Name: scaffold0037
Description:

Target: scaffold0037; HSP #1
Raw Score: 93; E-Value: 2e-45
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 22552 - 22767
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||  |||| ||||  |||||||||||||||||||| |||    | |||||| ||||||||||||||||||||||||||||    
T  22552 gaggttagaaactaagttgtttgtcttgatgttgctgttccagtaagactgatgcatat----tgatgttgtttataatgttatataattgtatatacat 22647  T
Q  101 tacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||| ||||| || ||||   ||  |||||||||| ||||||||| ||| ||||||||||| |||||| | ||||||||  |||    
T  22648 tacatgaattatgtttgatatttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgtctatgtcgctgtttgttattta 22747  T
Q  198 actaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||    
T  22748 actaagctgcatgagtcggt 22767  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1765 (Bit Score: 90; Significance: 1e-43; HSPs: 1)
Name: scaffold1765
Description:

Target: scaffold1765; HSP #1
Raw Score: 90; E-Value: 1e-43
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 1317 - 1106
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    |||||||||| |||| |||| ||||  |||||||||||||||||||  ||||| || |||||| |  |||||||||||| ||||||||||||| |||||     
T  1317 aaactaagttttttatcttgttgttgttgttccagtaagactgatgtatatgatttgatgttgttgttaatgttatatagttgtatatacattccatgaa 1218  T
Q  109 ttaagtttgataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagct 205  Q
    ||| |||||||  ||||   |||| |||  | ||||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||    
T  1217 ttatgtttgatgtttgaaatgttgatgacctgtattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaactaagct 1118  T
Q  206 gcatgagtcggt 217  Q
    ||||||||||||    
T  1117 gcatgagtcggt 1106  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0075 (Bit Score: 85; Significance: 1e-40; HSPs: 1)
Name: scaffold0075
Description:

Target: scaffold0075; HSP #1
Raw Score: 85; E-Value: 1e-40
Query Start/End: Original strand, 9 - 211
Target Start/End: Original strand, 53434 - 53640
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||  |||| |||||||||||||||||||| |||||| || |||||| ||||||||| ||||||||||||||||||||| |||     
T  53434 aaactaagttgtttatctttatgttgatgttccagtaagactgatgtttatgatttgatgttgtttataatgtgatataattgtatatacattacttgaa 53533  T
Q  109 ttaagtttg-ataattga---gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    |||  | || ||| ||||   |||| ||| ||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||||||||||||||    
T  53534 ttatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagc 53633  T
Q  205 tgcatga 211  Q
    |||||||    
T  53634 tgcatga 53640  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028 (Bit Score: 82; Significance: 7e-39; HSPs: 2)
Name: scaffold0028
Description:

Target: scaffold0028; HSP #1
Raw Score: 82; E-Value: 7e-39
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 62438 - 62222
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||||||||  |||| ||||||| |||| |  ||||||| ||||| || |  ||||||||||||||||||||||||    
T  62438 gaggttagaaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattgttatgaactaatgatgttgttaatgttatataattgtatataca 62339  T
Q  100 ttacatgacttaagtttgataattgagttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaac 199  Q
    ||| |||| ||| ||| |||| ||||| || || | |  |||||||||||||||| ||| ||| ||| |||||||||||||||| ||||||||  |||||    
T  62338 ttatatgaattatgtt-gatatttgagatgttgttgtgcattcgatattattataccatgatgtttttcatactgcctatgttgctgtttgttgtttaac 62240  T
Q  200 taagctgcatgagtcggt 217  Q
    ||||||||||||||||||    
T  62239 taagctgcatgagtcggt 62222  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0028; HSP #2
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 132894 - 132682
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| ||| |||||  |||||||||||||||||||| |||||||| |||||| |||||||||| ||      |||||||||    
T  132894 gaggttagaaactaagttgtttatcttactgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttgta------tatatacat 132801  T
Q  101 tacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatg-gtttgcatactgcctatgttgttgtttgtttatta 197  Q
    || |||  ||| | ||||||||||||  | ||||  ||| |||||||||| || |||||| |||  |||||||||| | ||||||| ||||||||  |||    
T  132800 taaatggattatg-ttgataattgagacgttgatgattacattcgatattgttgtatcatgatgattttgcatactacttatgttgctgtttgttattta 132702  T
Q  198 actaagctgcatgagtcggt 217  Q
     |||||||||||||||||||    
T  132701 tctaagctgcatgagtcggt 132682  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0476 (Bit Score: 81; Significance: 3e-38; HSPs: 1)
Name: scaffold0476
Description:

Target: scaffold0476; HSP #1
Raw Score: 81; E-Value: 3e-38
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 13009 - 12790
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||| ||||| |||||||||  |||||||||||| ||||    |||||  |||||||| |  |||||||||||||||||||||||||    
T  13009 gaggttagaaactaagtggtttatcttgctgttgttgttccagtaagcctgaattatatgatctaatgttgttattaatgttatataattgtatatacat 12910  T
Q  101 tacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||  ||  || |||| ||| ||  |||||||||| ||||||||| ||| |||||||| ||||||||||||||||||||  |||    
T  12909 tacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgatgatttgcatattgcctatgttgttgtttgttattta 12810  T
Q  198 actaagctgcatgagtcggt 217  Q
     |||||||||||||||||||    
T  12809 gctaagctgcatgagtcggt 12790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621 (Bit Score: 78; Significance: 2e-36; HSPs: 2)
Name: scaffold0621
Description:

Target: scaffold0621; HSP #1
Raw Score: 78; E-Value: 2e-36
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 8704 - 8490
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataat--tgtatatacattacatg 106  Q
    ||||||||||||||| ||||||| |  |||||||||||||||||||  |||||||| |||||| ||||||||| |||||||  |||||||||||||| ||    
T  8704 aaactaagttgtttatcttgctgatgttgttccagtaagactgatgtatatgaattgatgttgtttataatgtgatataatattgtatatacattacttg 8605  T
Q  107 acttaagtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaa 202  Q
    | |||  | ||| || ||||| || ||||   ||  ||| |||||| |||||||||  || |||||||||||||||||||||||||||||  ||||||||    
T  8604 aattatatatgaatatttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgttgtttgttatttaactaa 8505  T
Q  203 gctgcatgagtcggt 217  Q
    |||||||||||||||    
T  8504 gctgcatgagtcggt 8490  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0621; HSP #2
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 6777 - 6559
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||||||||||||||||| | |||||||||  |||| ||||||| |||| |   |||||  |||||||| |  ||||| ||||||||||||||||||    
T  6777 gaggttaaaaactaagttgtt-atcttgctgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatggtatataattgtatataca 6679  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||    
T  6678 ttatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttattt 6580  T
Q  197 aactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||    
T  6579 aactaagctgcatgagtcggt 6559  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0243 (Bit Score: 77; Significance: 7e-36; HSPs: 1)
Name: scaffold0243
Description:

Target: scaffold0243; HSP #1
Raw Score: 77; E-Value: 7e-36
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 6001 - 6220
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    |||||||||||||||||| |||| |||||||||| |||| ||||||| ||||    ||| |  |||||||| |  |||||||||||||||||||||||||    
T  6001 gaggttaaaaactaagttatttatcttgctgttattgtttcagtaagcctgaattgtataatctaatgttgttgctaatgttatataattgtatatacat 6100  T
Q  101 tacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatta 197  Q
    ||||||| ||| |||||||  ||  || |||  ||| ||  |||||||||| ||||||||| ||| |||||||||||||||||||  ||||||||  |||    
T  6101 tacatgaattatgtttgatgtttatgatgttaatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttactgtttgttattta 6200  T
Q  198 actaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||    
T  6201 actaagctgcatgagtcggt 6220  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023 (Bit Score: 75; Significance: 1e-34; HSPs: 4)
Name: scaffold0023
Description:

Target: scaffold0023; HSP #1
Raw Score: 75; E-Value: 1e-34
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 100617 - 100398
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||| ||||  |||| ||||||| || | |   |||||  |||||||| |  ||||||||||||||||||||||||    
T  100617 gaggttagaaactaagttgtttatcttgttgttgttgtttcagtaagcctaaattaatatgatctaatgttgttgttaatgttatataattgtatataca 100518  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| |||  ||| |||||   ||| ||||||  |||||||||||||||||||| ||| |||||||||||||||||||| ||||||||  ||    
T  100517 ttatatgaattatgtta-atatttgagatgttgttgatttgcattcgatattattatatcatgatgatttgcatactgcctatgttgctgtttgttattt 100419  T
Q  197 aactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||    
T  100418 aactaagctgcatgagtcggt 100398  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #2
Raw Score: 64; E-Value: 4e-28
Query Start/End: Original strand, 1 - 214
Target Start/End: Original strand, 40052 - 40268
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| |||||||||||||||||||| ||||  |||| ||||||| |||| |   |||||  | |||||| |  ||||| ||||||||||||||||||    
T  40052 gaggttagaaactaagttgtttaccttgatgttgttgtttcagtaagcctgaattaatatgatcttatgttgttgttaatggtatataattgtatataca 40151  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||||| |||||||||||||| ||||| ||  ||    
T  40152 ttatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcctactgcctatgttgctgtttattattt 40250  T
Q  197 aactaagctgcatgagtc 214  Q
    ||||||||||||||||||    
T  40251 aactaagctgcatgagtc 40268  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #3
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 159 - 217
Target Start/End: Complemental strand, 101581 - 101523
Alignment:
Q  159 tatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||||||||||||  ||||||||||||||||| |||||    
T  101581 tatggtttgcatactgcctatgttgttgtttgttgtttaactaagctgcatgaatcggt 101523  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0023; HSP #4
Raw Score: 38; E-Value: 0.000000000001
Query Start/End: Original strand, 168 - 217
Target Start/End: Complemental strand, 119948 - 119899
Alignment:
Q  168 catactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  119948 catactgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 119899  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0034 (Bit Score: 72; Significance: 6e-33; HSPs: 1)
Name: scaffold0034
Description:

Target: scaffold0034; HSP #1
Raw Score: 72; E-Value: 6e-33
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 32770 - 32560
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||| ||||| |||| ||||||| ||||    ||| |  |||||||  |  |||||||||||| |||||||||||||||||||     
T  32770 aaactaagttgtttatcttgttgttattgtttcagtaagcctgaattatataatctaatgtttttgttaatgttatatagttgtatatacattacatgaa 32671  T
Q  109 ttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctg 206  Q
    ||| |||||||  ||||| || || |  ||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||||||||||||||||    
T  32670 ttatgtttgatgtttgagatgttgttgattgcatttgatattgttatatcatgttgttttgcatactgcctatgttgctgtttgtttattaactaagctg 32571  T
Q  207 catgagtcggt 217  Q
    |||||||||||    
T  32570 catgagtcggt 32560  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0102 (Bit Score: 71; Significance: 2e-32; HSPs: 1)
Name: scaffold0102
Description:

Target: scaffold0102; HSP #1
Raw Score: 71; E-Value: 2e-32
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 19507 - 19288
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||||||||||||||| |||| ||||  |||| ||||||  |||||    |||||  |||||||| |  ||||| ||||||||||||||||||    
T  19507 gaggttagaaactaagttgtttatcttgatgttgttgtttcagtaaccctgatttaatatgatctaatgttgttgttaatggtatataattgtatataca 19408  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||    
T  19407 ttatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttattt 19309  T
Q  197 aactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||    
T  19308 aactaagctgcatgagtcggt 19288  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0150 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0150
Description:

Target: scaffold0150; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 32334 - 32122
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacat 100  Q
    ||||||| ||||||||||||||| ||| |||||  |||||||||||||||||||| |||||||| |||||| |||||||||| ||      |||||||||    
T  32334 gaggttagaaactaagttgtttatcttactgttgttgttccagtaagactgatgcatatgaattgatgttgtttataatgttgta------tatatacat 32241  T
Q  101 tacatgacttaagtttgataattgagttgctgat--ttatattcgatattattatatcattatg-gtttgcatactgcctatgttgttgtttgtttatta 197  Q
    || |||  ||| | ||||||||||||  | ||||  ||| |||||||||| ||||||||| |||  |||||||||| | ||||||||||||||||  |||    
T  32240 taaatggattatg-ttgataattgagacgttgatgattacattcgatattgttatatcatgatgattttgcatactacttatgttgttgtttgttattta 32142  T
Q  198 actaagctgcatgagtcggt 217  Q
     |||||||||||||||||||    
T  32141 tctaagctgcatgagtcggt 32122  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0078 (Bit Score: 70; Significance: 1e-31; HSPs: 1)
Name: scaffold0078
Description:

Target: scaffold0078; HSP #1
Raw Score: 70; E-Value: 1e-31
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 10762 - 10551
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||||||||  |||| ||||||| ||||    ||| |  |||||||| |  |||||| |||||||||||||||||||||||||     
T  10762 aaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatataatctaatgttgttgttaatgtcatataattgtatatacattacatgaa 10663  T
Q  109 ttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagct 205  Q
    ||| ||| |||  ||||| || ||||   ||  |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  ||||  |||||    
T  10662 ttatgttcgatgtttgagatgttgatgacttgcattcgatattgttatatcatgatgatttgcatactgcctatgttgttgtttgttatttaaaaaagct 10563  T
Q  206 gcatgagtcggt 217  Q
    ||||||||||||    
T  10562 gcatgagtcggt 10551  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333 (Bit Score: 67; Significance: 6e-30; HSPs: 2)
Name: scaffold0333
Description:

Target: scaffold0333; HSP #1
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 6779 - 6635
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  ||    || ||||   ||  |||||||||| ||||||||| ||| |||||||||    
T  6779 taatgttatataattgtatatacattacatgaattatgtttgatgtttataatgatgataacttgcattcgatattgttatatcatcatgatttgcatac 6680  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  6679 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 6635  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0333; HSP #2
Raw Score: 67; E-Value: 6e-30
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 14159 - 14015
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataattgagttgctgat---ttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  ||    || ||||   ||  |||||||||| ||||||||| ||| |||||||||    
T  14159 taatgttatataattgtatatacattacatgaattatgtttgatgtttataatgatgataacttgcattcgatattgttatatcatcatgatttgcatac 14060  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||  |||||||||||||||||||||||    
T  14059 tgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 14015  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0413 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0413
Description:

Target: scaffold0413; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 9 - 217
Target Start/End: Complemental strand, 12803 - 12592
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| |||||||||  |||| ||||||| || |||  ||| | || |||||| ||||||||| ||||||||||||||||||||| |||     
T  12803 aaactaagttgtttatcttgctgttgttgtttcagtaagtctaatgtgtattatttgatgttgtttataatgtgatataattgtatatacattac-tgaa 12705  T
Q  109 ttaagtttga-taattgagttgctgat---ttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagc 204  Q
    |||  | | | || ||||| || ||||   ||  ||| |||||| |||||||||  || |||||||||||||||||||| ||||||||||||||||||||    
T  12704 ttatatataagtatttgagatgttgatgacttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgctgtttgtttattaactaagc 12605  T
Q  205 tgcatgagtcggt 217  Q
    | |||||||||||    
T  12604 tacatgagtcggt 12592  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0278 (Bit Score: 63; Significance: 1e-27; HSPs: 1)
Name: scaffold0278
Description:

Target: scaffold0278; HSP #1
Raw Score: 63; E-Value: 1e-27
Query Start/End: Original strand, 1 - 217
Target Start/End: Complemental strand, 5885 - 5667
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    |||||||||||||||||| |||| |||| ||||  |||| ||||||| |||| |   |||||  |||||||| |  ||||| ||||||||||||||||||    
T  5885 gaggttaaaaactaagtt-tttatcttgttgttgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatggtatataattgtatataca 5787  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  |||||||||| ||||||||| ||| ||| |||||||||||||||| ||||||||  ||    
T  5786 ttatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattgttatatcatgatgattttcatactgcctatgttgctgtttgttattt 5688  T
Q  197 aactaagctgcatgagtcggt 217  Q
     ||||||||||||||||||||    
T  5687 tactaagctgcatgagtcggt 5667  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0530 (Bit Score: 62; Significance: 6e-27; HSPs: 1)
Name: scaffold0530
Description:

Target: scaffold0530; HSP #1
Raw Score: 62; E-Value: 6e-27
Query Start/End: Original strand, 76 - 217
Target Start/End: Original strand, 987 - 1131
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    |||||||||||||||||||||||||||||||| ||| |||||||  ||  || |||| ||| ||  ||||||| || ||||||||| ||| | |||||||    
T  987 taatgttatataattgtatatacattacatgaattatgtttgatgtttatgatgttgatgacttgcattcgatgttgttatatcatgatgatctgcatac 1086  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    | ||||||||||||||||||  |||||||||||||||||||||||    
T  1087 tacctatgttgttgtttgttatttaactaagctgcatgagtcggt 1131  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357 (Bit Score: 60; Significance: 9e-26; HSPs: 3)
Name: scaffold0357
Description:

Target: scaffold0357; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 126 - 217
Target Start/End: Complemental strand, 13243 - 13152
Alignment:
Q  126 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||  ||| |||||| |||||||||  || ||||||||||||||||||||||||||||||||||||||||||||||||||||||    
T  13243 gttgttgatttgcatttgatattgttatatcatgctgttttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 13152  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #2
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 16106 - 16197
Alignment:
Q  126 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||| ||| |||||| |||||||||  || |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  16106 gttgttgatttacatttgatattgttatatcatgttgttttgcatactacctatgttgttgtttgtttattaactaagctgcatgagtcggt 16197  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0357; HSP #3
Raw Score: 44; E-Value: 3e-16
Query Start/End: Original strand, 170 - 217
Target Start/End: Complemental strand, 2732 - 2685
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| ||||||||||||||||||||||||||||||    
T  2732 tactgcctatgttgttgcttgtttattaactaagctgcatgagtcggt 2685  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0165 (Bit Score: 60; Significance: 9e-26; HSPs: 1)
Name: scaffold0165
Description:

Target: scaffold0165; HSP #1
Raw Score: 60; E-Value: 9e-26
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 27755 - 27846
Alignment:
Q  126 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||| ||| |||||| |||||||||  || |||||||||| |||||||||||||||||||||||||||||||||||||||||||    
T  27755 gttgttgatttacatttgatattgttatatcatgctgttttgcatactacctatgttgttgtttgtttattaactaagctgcatgagtcggt 27846  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211 (Bit Score: 59; Significance: 4e-25; HSPs: 2)
Name: scaffold0211
Description:

Target: scaffold0211; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 28689 - 28775
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatata 87  Q
    ||||||| ||||||||||||||| |||||||| | |||||||||||||||||||| |||||||| |||||| |||||||||||||||    
T  28689 gaggttagaaactaagttgtttatcttgctgtcattgttccagtaagactgatgcatatgaattgatgttgtttataatgttatata 28775  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0211; HSP #2
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 28813 - 28867
Alignment:
Q  164 tttgcatactgcctatgttgttgtt-tgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||| |||  ||||  |||||||||||||||||||||||    
T  28813 tttgcatactgcctatgttgctgtaatgttgtttaactaagctgcatgagtcggt 28867  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0207 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0207
Description:

Target: scaffold0207; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 2523 - 2742
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactga-tgcttatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||| ||||||||||| ||||||| |  |||| ||||||| |||| |   |||||  |||||||| |  ||||| ||||||||||||||||||    
T  2523 gaggttagaaattaagttgtttatcttgctgatgttgtttcagtaagcctgaattaatatgatctaatgttgttgttaatggtatataattgtatataca 2622  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  |||| ||||| ||||| ||| ||| ||| |||||||||||||||| ||||||||  ||    
T  2623 ttatatgaattatgtt-gatatttgagatgttgttgatttgcattcaatattgttataacatgatgatttacatactgcctatgttgatgtttgttattt 2721  T
Q  197 aactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||    
T  2722 aactaagctgcatgagtcggt 2742  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0020 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0020
Description:

Target: scaffold0020; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 15796 - 15874
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||||||||||||  |||||||||||||||||||||||    
T  15796 attcgatattgttatatcatcatgatttgcatactgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 15874  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0008 (Bit Score: 59; Significance: 4e-25; HSPs: 1)
Name: scaffold0008
Description:

Target: scaffold0008; HSP #1
Raw Score: 59; E-Value: 4e-25
Query Start/End: Original strand, 1 - 217
Target Start/End: Original strand, 14575 - 14794
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| |||||||||||| || |||||||||  |||| ||||||| |||||    |||||  |||||||  |  ||||| |||||||| |||||||||    
T  14575 gaggttagaaactaagttgtatatcttgctgttgttgtttcagtaagcctgatttaatatgatctaatgtttttgttaatggtatataatagtatataca 14674  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttatt 196  Q
    ||| |||| ||| ||| |||| |||||   ||| ||||||  ||||||||||| |||||||| ||| ||| | |||||||||||||| ||||||||  ||    
T  14675 ttatatgaattatgtt-gatatttgagatgttgttgatttgcattcgatattactatatcatgatgattttcttactgcctatgttgctgtttgttagtt 14773  T
Q  197 aactaagctgcatgagtcggt 217  Q
    |||||||||||||||||||||    
T  14774 aactaagctgcatgagtcggt 14794  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0138 (Bit Score: 58; Significance: 1e-24; HSPs: 1)
Name: scaffold0138
Description:

Target: scaffold0138; HSP #1
Raw Score: 58; E-Value: 1e-24
Query Start/End: Original strand, 76 - 217
Target Start/End: Complemental strand, 13107 - 12963
Alignment:
Q  76 taatgttatataattgtatatacattacatgacttaagtttgataatt--ga-gttgctgatttatattcgatattattatatcattatggtttgcatac 172  Q
    ||||||||||||||||||||||||||||| || ||| |||||||  ||  || |||| ||| ||  |||||||||| |||||||||  || |||||||||    
T  13107 taatgttatataattgtatatacattacacgaattatgtttgatgtttatgatgttgatgacttgcattcgatattgttatatcatgctgatttgcatac 13008  T
Q  173 tgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||  |||||| ||| ||||||||||||    
T  13007 tgcctatgttgttgtttgttatttaactgagcagcatgagtcggt 12963  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021 (Bit Score: 55; Significance: 9e-23; HSPs: 4)
Name: scaffold0021
Description:

Target: scaffold0021; HSP #1
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 136253 - 136466
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaatt-aatgttgcttataatgttatataattgtatatacattacatga 107  Q
    ||||||||||||||| |||||||||  |||| ||||||| ||||    ||||| || ||||||| |  |||||||||||| |||||||||||||||||||    
T  136253 aaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatatgattttaatgttgttgttaatgttatatagttgtatatacattacatga 136352  T
Q  108 cttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
     ||| ||  ||| || ||| |||| ||||||  ||| |||||| ||||||||| |  || ||||  |||||||||||| | |||||||||||||||||||    
T  136353 attatgtacgatgatgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgtgtactgcctatgtcgctgtttgtttattaactaag 136452  T
Q  204 ctgcatgagtcggt 217  Q
     |||||||||||||    
T  136453 ttgcatgagtcggt 136466  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #2
Raw Score: 55; E-Value: 9e-23
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 144961 - 145174
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaatt-aatgttgcttataatgttatataattgtatatacattacatga 107  Q
    ||||||||||||||| |||||||||  |||| ||||||| ||||    ||||| || ||||||| |  |||||||||||| |||||||||||||||||||    
T  144961 aaactaagttgtttatcttgctgttgttgtttcagtaagcctgaattatatgattttaatgttgttgttaatgttatatagttgtatatacattacatga 145060  T
Q  108 cttaagtttgataat-tga-gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
     ||| ||  ||| || ||| |||| ||||||  ||| |||||| ||||||||| |  || ||||  |||||||||||| | |||||||||||||||||||    
T  145061 attatgtacgatgatgtgatgttgttgatttgcatttgatattgttatatcatgaactgttttgtgtactgcctatgtcgctgtttgtttattaactaag 145160  T
Q  204 ctgcatgagtcggt 217  Q
     |||||||||||||    
T  145161 ttgcatgagtcggt 145174  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #3
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 174838 - 174790
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  174838 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 174790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0021; HSP #4
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 121835 - 121790
Alignment:
Q  171 actgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||| |||  |||||||||||||||||||||||    
T  121835 actgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 121790  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0461 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0461
Description:

Target: scaffold0461; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 142 - 214
Target Start/End: Complemental strand, 11563 - 11491
Alignment:
Q  142 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  11563 cgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtc 11491  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0124 (Bit Score: 53; Significance: 1e-21; HSPs: 1)
Name: scaffold0124
Description:

Target: scaffold0124; HSP #1
Raw Score: 53; E-Value: 1e-21
Query Start/End: Original strand, 142 - 214
Target Start/End: Original strand, 38278 - 38350
Alignment:
Q  142 cgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||| ||| |||||||||||||||||||| || ||||| |||||||||||||||||||||    
T  38278 cgatattattatatcatgatgttttgcatactgcctatgttgctgattgttaattaactaagctgcatgagtc 38350  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0100 (Bit Score: 51; Significance: 2e-20; HSPs: 1)
Name: scaffold0100
Description:

Target: scaffold0100; HSP #1
Raw Score: 51; E-Value: 2e-20
Query Start/End: Original strand, 139 - 217
Target Start/End: Original strand, 23902 - 23980
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||| ||||||||| ||| |||||||||||||||||||| ||||||||  ||||||||||| |||||||||||    
T  23902 attcgatattgttatatcatgatgatttgcatactgcctatgttgctgtttgttatttaactaagctacatgagtcggt 23980  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold2014 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold2014
Description:

Target: scaffold2014; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 138 - 217
Target Start/End: Complemental strand, 1135 - 1056
Alignment:
Q  138 tattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||| |||||||||  || |||||||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  1135 tatttgatattgttatatcatgctgttttgcatactgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 1056  T

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Target: scaffold0628 (Bit Score: 48; Significance: 1e-18; HSPs: 1)
Name: scaffold0628
Description:

Target: scaffold0628; HSP #1
Raw Score: 48; E-Value: 1e-18
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 2812 - 2903
Alignment:
Q  126 gttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||  ||| |||||| ||||||||| ||| |||||||||||||||||| | ||||||||  |||||||||||||||||||||||    
T  2812 gttgttgatttgcatttgatattgttatatcatgatgatttgcatactgcctatgtagctgtttgttatttaactaagctgcatgagtcggt 2903  T

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Target: scaffold0507 (Bit Score: 47; Significance: 5e-18; HSPs: 1)
Name: scaffold0507
Description:

Target: scaffold0507; HSP #1
Raw Score: 47; E-Value: 5e-18
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 7944 - 8158
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||||||| ||||||| |  ||||||||| |||||||||  ||||| || |||||| ||||||||| |||||||| |||||||||||| |||     
T  7944 aaactaagttgtttatcttgctgatgttgttccagtgagactgatgtatatgatttgatgttgtttataatgtgatataattttatatacattacttgaa 8043  T
Q  109 ttaagtttgataattga----gttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaa 202  Q
    |||  | |||   || |    |||| ||| ||  ||| |||||||||||||||| |  || ||||||||||||||||| || | ||||||  |||| |||    
T  8044 ttatatatgaatgtttaagatgttgttgaatttcatttgatattattatatcatgagctgatttgcatactgcctatgctgctatttgttatttaattaa 8143  T
Q  203 gctgcatgagtcggt 217  Q
    |||||||| ||||||    
T  8144 gctgcatgcgtcggt 8158  T

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Target: scaffold0123 (Bit Score: 45; Significance: 8e-17; HSPs: 1)
Name: scaffold0123
Description:

Target: scaffold0123; HSP #1
Raw Score: 45; E-Value: 8e-17
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 25178 - 25130
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||||||||||||||||||||||||||||||||    
T  25178 atactgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 25130  T

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Target: scaffold1257 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold1257
Description:

Target: scaffold1257; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 1 - 185
Target Start/End: Original strand, 2096 - 2283
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgct-tatgaattaatgttgcttataatgttatataattgtatataca 99  Q
    ||||||| ||| ||||||||||| |||||||||  |||| ||||||| |||||    |||||   ||||||| |  ||||| ||||||||||||||||||    
T  2096 gaggttagaaaataagttgtttatcttgctgttgttgtttcagtaagcctgatttaatatgatccaatgttgttgttaatggtatataattgtatataca 2195  T
Q  100 ttacatgacttaagtttgataattgag---ttgctgatttatattcgatattattatatcattatggtttgcatactgcctatgttgtt 185  Q
    ||| |||| ||| | | |||| |||||   ||| ||||||  ||| |||||| ||||||||| ||| ||||||||||||||||||||||    
T  2196 ttatatgaattatgct-gatatttgagatgttgttgatttgcatttgatattgttatatcatgatgatttgcatactgcctatgttgtt 2283  T

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Target: scaffold0247 (Bit Score: 43; Significance: 0.000000000000001; HSPs: 1)
Name: scaffold0247
Description:

Target: scaffold0247; HSP #1
Raw Score: 43; E-Value: 0.000000000000001
Query Start/End: Original strand, 140 - 214
Target Start/End: Original strand, 18047 - 18121
Alignment:
Q  140 ttcgatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtc 214  Q
    ||||||||||||||||||| ||| | |||||| ||| ||||||| || ||||| |||||||||||||||||||||    
T  18047 ttcgatattattatatcatgatgttgtgcataatgcatatgttgctgattgttaattaactaagctgcatgagtc 18121  T

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Target: scaffold1403 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 1)
Name: scaffold1403
Description:

Target: scaffold1403; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 619 - 574
Alignment:
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  619 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 574  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022 (Bit Score: 42; Significance: 0.000000000000005; HSPs: 2)
Name: scaffold0022
Description:

Target: scaffold0022; HSP #1
Raw Score: 42; E-Value: 0.000000000000005
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 78391 - 78346
Alignment:
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||| |||||||||||||||||||||||||||||||||    
T  78391 ctgcctatgttgctgtttgtttattaactaagctgcatgagtcggt 78346  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0022; HSP #2
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 128855 - 129067
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||| ||| ||| |||||  |||| ||||||| |||||    |||| || |||||| | ||||||| ||||| |||||||| ||||||||||     
T  128855 aaactaagttgcttatcttactgttgttgtttcagtaagcctgatttagatgatttgatgttgttaataatgtgatatatttgtatatccattacatgaa 128954  T
Q  109 ttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
    |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||||||| |  || |||   |||||||||||||| |||||||| ||||||||||    
T  128955 ttatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaattgttttatgtactgcctatgttgctgtttgtt-attaactaag 129053  T
Q  204 ctgcatgagtcggt 217  Q
    ||||||||||||||    
T  129054 ctgcatgagtcggt 129067  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0139 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0139
Description:

Target: scaffold0139; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 38388 - 38340
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||||||| ||||||||||||||||||||||||    
T  38388 atactgcctatgttgctgtttgttcattaactaagctgcatgagtcggt 38340  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 2)
Name: scaffold0106
Description:

Target: scaffold0106; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 7338 - 7290
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||||  |||||||||||||||||||||||    
T  7338 atactgcctatgttgttgtttgttatttaactaagctgcatgagtcggt 7290  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0106; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 1359 - 1313
Alignment:
Q  171 actgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||| ||||||||  |||||||||||||||||||||||    
T  1359 actgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 1313  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0080 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0080
Description:

Target: scaffold0080; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 19934 - 19982
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||||||||||||| ||||||||||||||||||    
T  19934 atactgcctatgttgctgtttgtttattaattaagctgcatgagtcggt 19982  T

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Target: scaffold0040 (Bit Score: 41; Significance: 0.00000000000002; HSPs: 1)
Name: scaffold0040
Description:

Target: scaffold0040; HSP #1
Raw Score: 41; E-Value: 0.00000000000002
Query Start/End: Original strand, 9 - 217
Target Start/End: Original strand, 103524 - 103728
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    |||||||||| |||| ||| |||||  |||| ||||||| ||||    ||||| ||||||||| |  ||||||||| || |||||||||||||||||||     
T  103524 aaactaagttctttatcttcctgttgttgtttcagtaagcctgaattatatgatttaatgttgttgttaatgttatgtagttgtatatacattacatgaa 103623  T
Q  109 ttaagtttgataattgagttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaagctg 206  Q
    ||| || ||||      |||| || |||  ||| |||||| ||||||||| |  || |||  ||||| ||||||||| ||||| ||||||||||||||||    
T  103624 ttatgtatgat------gttgttgttttgcatttgatattgttatatcatgaattgttttttatactacctatgttgctgtttatttattaactaagctg 103717  T
Q  207 catgagtcggt 217  Q
    ||| |||||||    
T  103718 cattagtcggt 103728  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold1137 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold1137
Description:

Target: scaffold1137; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 1 - 87
Target Start/End: Original strand, 2181 - 2267
Alignment:
Q  1 gaggttaaaaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatata 87  Q
    ||||||| ||||||||||||||| ||| ||| |  | | |||||||||||||||| |||||||| |||||| |||||||||| ||||    
T  2181 gaggttagaaactaagttgtttatcttactgatcttatcccagtaagactgatgcatatgaattgatgttgtttataatgttgtata 2267  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 2)
Name: scaffold0420
Description:

Target: scaffold0420; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 13793 - 13835
Alignment:
Q  175 cctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||||| ||||||||||||||||||||||||    
T  13793 cctatgttgttgtttgttcattaactaagctgcatgagtcggt 13835  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0420; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 6333 - 6381
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||||||| |||||||||| |||||||||||||    
T  6333 atactgcctatgttgctgtttgttcattaactaagttgcatgagtcggt 6381  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0141 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0141
Description:

Target: scaffold0141; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 39574 - 39501
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| |||||||||||||||||| |||||  |||||||||||||||||||||||    
T  39574 gatattattatgtcatgctgttttgtatactgcctatgttgttg-ttgttatttaactaagctgcatgagtcggt 39501  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0049 (Bit Score: 39; Significance: 0.0000000000003; HSPs: 1)
Name: scaffold0049
Description:

Target: scaffold0049; HSP #1
Raw Score: 39; E-Value: 0.0000000000003
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 75238 - 75311
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| |||||||||||||||||| |||||  |||||||||||||||||||||||    
T  75238 gatattattatgtcatgctgttttgtatactgcctatgttgttg-ttgttatttaactaagctgcatgagtcggt 75311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0598 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0598
Description:

Target: scaffold0598; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 1098 - 1146
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| ||||| || ||||||||||||||||||||||||    
T  1098 atactgcctatgttgatgtttattaattaactaagctgcatgagtcggt 1146  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0456 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0456
Description:

Target: scaffold0456; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 10472 - 10520
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| |||||||| |||||||| |||||||||||||||    
T  10472 atactgcctatgttgctgtttgttaattaactatgctgcatgagtcggt 10520  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0090 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0090
Description:

Target: scaffold0090; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 2747 - 2699
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| ||||||| |||| ||||||||||||||||||||    
T  2747 atactgcctatgttgctgtttgtctattgactaagctgcatgagtcggt 2699  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0032 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0032
Description:

Target: scaffold0032; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 51654 - 51606
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| ||||||||  |||||||||||||||||||||||    
T  51654 atactgcctatgttgctgtttgttatttaactaagctgcatgagtcggt 51606  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006 (Bit Score: 37; Significance: 0.000000000005; HSPs: 2)
Name: scaffold0006
Description:

Target: scaffold0006; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 97242 - 97033
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||| ||  ||| |||||  |||| ||||||| |||||    |||| || |||||| | ||||||| ||||| |||||||| ||||||||||     
T  97242 aaactaagttgcttttcttactgttgttgtttcagtaagcctgatatagatgatttgatgttgttaataatgtgatatatttgtatatgcattacatgaa 97143  T
Q  109 ttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
    |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||||||| |  || |||   |||||||||||||| ||||| |||||||||||||    
T  97142 ttatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttatttattaactaag 97043  T
Q  204 ctgcatgagt 213  Q
    ||||||||||    
T  97042 ctgcatgagt 97033  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0006; HSP #2
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 9 - 213
Target Start/End: Complemental strand, 106520 - 106311
Alignment:
Q  9 aaactaagttgtttaccttgctgttaatgttccagtaagactgatgcttatgaattaatgttgcttataatgttatataattgtatatacattacatgac 108  Q
    ||||||||||| ||  ||| |||||  |||| ||||||| |||||    |||| || |||||| | ||||||| ||||| |||||||| ||||||||||     
T  106520 aaactaagttgcttttcttactgttgttgtttcagtaagcctgatatagatgatttgatgttgttaataatgtgatatatttgtatatgcattacatgaa 106421  T
Q  109 ttaagtttgataattgag---ttgctgatttatattcgatattattatatcatta--tggtttgcatactgcctatgttgttgtttgtttattaactaag 203  Q
    |||  | ||||  |||||   ||| ||||||  ||| |||||| ||||||||| |  || |||   |||||||||||||| ||||| |||||||||||||    
T  106420 ttatatatgatgtttgagatgttgttgatttgcatttgatattgttatatcatgaactgttttatgtactgcctatgttgctgtttatttattaactaag 106321  T
Q  204 ctgcatgagt 213  Q
    ||||||||||    
T  106320 ctgcatgagt 106311  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0005 (Bit Score: 37; Significance: 0.000000000005; HSPs: 1)
Name: scaffold0005
Description:

Target: scaffold0005; HSP #1
Raw Score: 37; E-Value: 0.000000000005
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 267732 - 267684
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||| ||||||| ||||||||||||||||||| |||||||||||||    
T  267732 atactgcatatgttgatgtttgtttattaactaagttgcatgagtcggt 267684  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0003 (Bit Score: 36; Significance: 0.00000000002; HSPs: 1)
Name: scaffold0003
Description:

Target: scaffold0003; HSP #1
Raw Score: 36; E-Value: 0.00000000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 339972 - 340044
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| ||||||||||||||||||  ||||  |||||||||||||||||||||||    
T  339972 gatattattatgtcatgttgttttgtatactgcctatgttgttg--tgttatttaactaagctgcatgagtcggt 340044  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0540 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0540
Description:

Target: scaffold0540; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 3174 - 3247
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  3174 gatattattatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 3247  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]

Target: scaffold0120 (Bit Score: 35; Significance: 0.00000000008; HSPs: 3)
Name: scaffold0120
Description:

Target: scaffold0120; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Original strand, 32980 - 33053
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| ||||||||| ||||| |||| ||| ||||||||||||||||||||||||    
T  32980 gatattattatgtcatgctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggt 33053  T

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Target: scaffold0120; HSP #2
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 46025 - 45952
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||| ||||  || |||| ||||||||| ||||| |||| ||| ||||||||||||||||||||||||    
T  46025 gatattattatgtcatgctgttttgtatactgcctgtgttgctgtt-gttaattaactaagctgcatgagtcggt 45952  T

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Target: scaffold0120; HSP #3
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 16189 - 16137
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  16189 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 16137  T

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Target: scaffold0074 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0074
Description:

Target: scaffold0074; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 143 - 213
Target Start/End: Original strand, 38725 - 38795
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagt 213  Q
    |||||| |||||||||  || ||||||||||| |||||||| ||||||||  ||||||||| |||||||||    
T  38725 gatattgttatatcatgttgttttgcatactgtctatgttgctgtttgttatttaactaaggtgcatgagt 38795  T

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Target: scaffold0064 (Bit Score: 35; Significance: 0.00000000008; HSPs: 1)
Name: scaffold0064
Description:

Target: scaffold0064; HSP #1
Raw Score: 35; E-Value: 0.00000000008
Query Start/End: Original strand, 171 - 217
Target Start/End: Complemental strand, 47065 - 47019
Alignment:
Q  171 actgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||||||||  ||||||||||| |||||||||||    
T  47065 actgcctatgttgttgtttgttatttaactaagctacatgagtcggt 47019  T

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Target: scaffold1842 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold1842
Description:

Target: scaffold1842; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 1093 - 1145
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  1093 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 1145  T

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Target: scaffold0358 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0358
Description:

Target: scaffold0358; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 4788 - 4736
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  4788 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 4736  T

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Target: scaffold0014 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0014
Description:

Target: scaffold0014; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 170 - 215
Target Start/End: Original strand, 206575 - 206619
Alignment:
Q  170 tactgcctatgttgttgtttgtttattaactaagctgcatgagtcg 215  Q
    |||||||||||||| |||| ||||||||||||||||||||||||||    
T  206575 tactgcctatgttgctgtt-gtttattaactaagctgcatgagtcg 206619  T

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Target: scaffold0011 (Bit Score: 34; Significance: 0.0000000003; HSPs: 1)
Name: scaffold0011
Description:

Target: scaffold0011; HSP #1
Raw Score: 34; E-Value: 0.0000000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 168023 - 168075
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||||||||| |||  |||||||||||||||||||||||    
T  168023 tttgtatactgcctatgttgttgtt-gttatttaactaagctgcatgagtcggt 168075  T

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Target: scaffold0908 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0908
Description:

Target: scaffold0908; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 126 - 217
Target Start/End: Original strand, 3192 - 3283
Alignment:
Q  126 gttgctgatttatattcgatattattatatcattatggttt-gcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||| ||| ||| ||||||||||||||||  || ||| | ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  3192 gttgttgaattacatttgatattattatatcatgctgtttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 3283  T

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Target: scaffold0351 (Bit Score: 33; Significance: 0.000000001; HSPs: 1)
Name: scaffold0351
Description:

Target: scaffold0351; HSP #1
Raw Score: 33; E-Value: 0.000000001
Query Start/End: Original strand, 169 - 217
Target Start/End: Complemental strand, 16354 - 16306
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||| ||||| ||  |||||||||||||||||||||||    
T  16354 atactgcctatgttgctgtttcttatttaactaagctgcatgagtcggt 16306  T

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Target: scaffold0718 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0718
Description:

Target: scaffold0718; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 175 - 217
Target Start/End: Original strand, 5183 - 5225
Alignment:
Q  175 cctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||| ||||||||  |||||||||||||||||||||||    
T  5183 cctatgttgatgtttgttatttaactaagctgcatgagtcggt 5225  T

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Target: scaffold0427 (Bit Score: 31; Significance: 0.00000002; HSPs: 1)
Name: scaffold0427
Description:

Target: scaffold0427; HSP #1
Raw Score: 31; E-Value: 0.00000002
Query Start/End: Original strand, 143 - 217
Target Start/End: Complemental strand, 13594 - 13521
Alignment:
Q  143 gatattattatatcattatggtttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||| || ||||  || |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  13594 gatattatcatgtcatgttgttttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 13521  T

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Target: scaffold2080 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold2080
Description:

Target: scaffold2080; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Original strand, 813 - 857
Alignment:
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||    
T  813 ctgcctatgttgttgtt-gtatattaattaagctgcatgagtcggt 857  T

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Target: scaffold0490 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0490
Description:

Target: scaffold0490; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 2028 - 1976
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||| | |||| ||| ||||||||||||||||||||||||    
T  2028 tttgtatactgcctatgtcgctgtt-gttaattaactaagctgcatgagtcggt 1976  T

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Target: scaffold0292 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0292
Description:

Target: scaffold0292; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 419 - 367
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| |||||||||||||| ||||| |||  |||||||||||||||||||||||    
T  419 tttgtatactgcctatgttattgtt-gttatttaactaagctgcatgagtcggt 367  T

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Target: scaffold0235 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0235
Description:

Target: scaffold0235; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 11488 - 11540
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||| |||||||||||||| |||  |||||||||||||||||||||||    
T  11488 tttgtatactacctatgttgttgtt-gttatttaactaagctgcatgagtcggt 11540  T

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Target: scaffold0122 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0122
Description:

Target: scaffold0122; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 26110 - 26162
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  26110 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 26162  T

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Target: scaffold0107 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0107
Description:

Target: scaffold0107; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 172 - 217
Target Start/End: Complemental strand, 36248 - 36204
Alignment:
Q  172 ctgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||||||||||||||| || |||||| ||||||||||||||||||    
T  36248 ctgcctatgttgttgtt-gtatattaattaagctgcatgagtcggt 36204  T

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Target: scaffold0088 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0088
Description:

Target: scaffold0088; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Complemental strand, 20987 - 20934
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||| ||||||||||| || ||||| ||||||||||||  ||||||||||    
T  20987 tttgcatattgcctatgttgctgattgttaattaactaagctttatgagtcggt 20934  T

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Target: scaffold0056 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0056
Description:

Target: scaffold0056; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 17262 - 17314
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  17262 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 17314  T

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Target: scaffold0042 (Bit Score: 30; Significance: 0.00000007; HSPs: 1)
Name: scaffold0042
Description:

Target: scaffold0042; HSP #1
Raw Score: 30; E-Value: 0.00000007
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 24348 - 24400
Alignment:
Q  164 tttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||||||||||||| |||| |||  |||||||||||||||||||||||    
T  24348 tttgtatactgcctatgttgctgtt-gttatttaactaagctgcatgagtcggt 24400  T

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Target: scaffold0737 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0737
Description:

Target: scaffold0737; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 169 - 217
Target Start/End: Original strand, 1847 - 1895
Alignment:
Q  169 atactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    ||||| ||||||||  |||| ||||| ||||||||||||||||||||||    
T  1847 atactacctatgttaatgttagtttaataactaagctgcatgagtcggt 1895  T

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Target: scaffold0647 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0647
Description:

Target: scaffold0647; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 164 - 217
Target Start/End: Original strand, 6166 - 6221
Alignment:
Q  164 tttgcatactgcctatgttgttgtt--tgtttattaactaagctgcatgagtcggt 217  Q
    |||| ||||| ||||||||||||||  ||||  |||||||||||||||||||||||    
T  6166 tttgtatactacctatgttgttgttgttgttatttaactaagctgcatgagtcggt 6221  T

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Target: scaffold0475 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0475
Description:

Target: scaffold0475; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 139 - 183
Target Start/End: Complemental strand, 9180 - 9136
Alignment:
Q  139 attcgatattattatatcattatggtttgcatactgcctatgttg 183  Q
    |||||||||| ||||||||| |||  |||||||||||||||||||    
T  9180 attcgatattgttatatcatgatgagttgcatactgcctatgttg 9136  T

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Target: scaffold0070 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0070
Description:

Target: scaffold0070; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 165 - 217
Target Start/End: Complemental strand, 4599 - 4548
Alignment:
Q  165 ttgcatactgcctatgttgttgtttgtttattaactaagctgcatgagtcggt 217  Q
    |||||||||||||||| ||||| |||||  ||||||||| |||||||||||||    
T  4599 ttgcatactgcctatgctgttg-ttgttatttaactaagttgcatgagtcggt 4548  T

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Target: scaffold0016 (Bit Score: 29; Significance: 0.0000003; HSPs: 1)
Name: scaffold0016
Description:

Target: scaffold0016; HSP #1
Raw Score: 29; E-Value: 0.0000003
Query Start/End: Original strand, 73 - 125
Target Start/End: Original strand, 207470 - 207522
Alignment:
Q  73 ttataatgttatataattgtatatacattacatgacttaagtttgataattga 125  Q
    |||||||||||||||||| |||||| ||| ||||| ||| ||||||| |||||    
T  207470 ttataatgttatataattatatatatattgcatgaattatgtttgatgattga 207522  T

Back To: [ HSP Overview ] [ Target Overview ] [ Alignment Overview ]



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