View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4084_low_4 (Length: 250)
Name: NF4084_low_4
Description: NF4084
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4084_low_4 |
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Alignment Details
Target: chr2 (Bit Score: 209; Significance: 1e-114; HSPs: 1)
Name: chr2
Description:
Target: chr2; HSP #1
Raw Score: 209; E-Value: 1e-114
Query Start/End: Original strand, 1 - 240
Target Start/End: Complemental strand, 4863610 - 4863370
Alignment:
| Q |
1 |
cggcttcaaaattttcaaccataccttatcttgatcctgatataacttaattaaattcaagctaattgcatttaaattcaaactaattaaggcatacaaa |
100 |
Q |
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| T |
4863610 |
cggcttcaaaattttcaaccataccttatcttgatcctgatataacttaattaaattcaagctaattgcatttaaattcaaactaattaaggcatacaaa |
4863511 |
T |
|
| Q |
101 |
tattaattaatttgatnnnnnnnntt-accatgaatctcaagaagctaattggttgaaagacttagaagtagtattatgagtgcccttaagttgactcct |
199 |
Q |
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|||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
4863510 |
tattaattaatttgataaaaaaaatttaccatgaatctcaagaagctaattggttgaaagacttagaagtagtattatgagtgcccttaagttgactcct |
4863411 |
T |
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| Q |
200 |
cttcttctttttctttgtgtaagggatccctctagcctttg |
240 |
Q |
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| T |
4863410 |
cttcttctttttctttgtgtaagggatccctctagcctttg |
4863370 |
T |
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