View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4085_low_12 (Length: 311)
Name: NF4085_low_12
Description: NF4085
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4085_low_12 |
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Alignment Details
Target: chr6 (Bit Score: 274; Significance: 1e-153; HSPs: 1)
Name: chr6
Description:
Target: chr6; HSP #1
Raw Score: 274; E-Value: 1e-153
Query Start/End: Original strand, 11 - 292
Target Start/End: Complemental strand, 2386313 - 2386032
Alignment:
| Q |
11 |
cacagatgatacaagtagcaacaaaaaagcacttttctttcaatggtggtattttggtgtttgtgctggaagcctaatgggtgtaacagtcatgtcttac |
110 |
Q |
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| T |
2386313 |
cacagatgatacaagtagcaacaaaaaagcacttttctttcaatggtggtattttggtgtttgtgctggaagcctaatgggtgtaacagtcatgtcttac |
2386214 |
T |
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| Q |
111 |
atccaagatacatttggttgggtaatagggtttgctatacctgcgatttcgatgcttctttctatcttgattttctctagtggaagctctatatattcgt |
210 |
Q |
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||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2386213 |
atccaagatacatttggttgggtaatagggtttgcgatacctgcgatttcgatgcttctttctatcttgattttctctagtggaagctctatatattcgt |
2386114 |
T |
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| Q |
211 |
ataaagaacaagatgatgatgatcttcaagataagaagcctttcacgaaaatgtttaaaagtattaaagaatctgcattgaa |
292 |
Q |
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|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
2386113 |
ataaagaacaagatgatgatgatcttcaagataaaaagcctttcacgaaaatgtttaaaagtattaaagaatctgcattgaa |
2386032 |
T |
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