View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4086_low_21 (Length: 260)
Name: NF4086_low_21
Description: NF4086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4086_low_21 |
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Alignment Details
Target: chr1 (Bit Score: 164; Significance: 1e-87; HSPs: 1)
Name: chr1
Description:
Target: chr1; HSP #1
Raw Score: 164; E-Value: 1e-87
Query Start/End: Original strand, 11 - 240
Target Start/End: Original strand, 26306810 - 26307041
Alignment:
| Q |
11 |
cacagacgctgaacacatgaatactactctatgaagcactgacacagacgccgaacacaacaatgacatattgacatggaaagacatgaatgtaacatta |
110 |
Q |
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| T |
26306810 |
cacagacgccgaacacatga---ctactctatgaagcactgacacagacgccgaacacaacaatgacatattgacatggaaagacatgaatgcaacatta |
26306906 |
T |
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| Q |
111 |
acatgtgtcgatgtcgtgttggtaggcactaccatatcatttattatt---gaag--gcataacaaataacatcatgaacatgatgttacaaacatgaat |
205 |
Q |
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|||||||||||||||| ||||||||||||||||||||||| ||||| | || |||||||||||||||||||||||||||||||| |||||||||| |
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| T |
26306907 |
acatgtgtcgatgtcgcgttggtaggcactaccatatcatgtattagtaggctagtagcataacaaataacatcatgaacatgatgttataaacatgaat |
26307006 |
T |
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| Q |
206 |
ttgctgtagcatgacacttatgattgaaggcgtat |
240 |
Q |
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| T |
26307007 |
ttgctgtagcatgacacttatgattgaaggcgtat |
26307041 |
T |
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