View Alignment
This page shows all the targets hit by the same query that passed the project filter. Click a track to view the detailed alignment.
| Legend |
| | Query |
| | Query hiting target |
| Query hiting target's complemental strand |
| | Query's complemental strand hiting target |
| Query's complemental strand hiting target's complemental strand |
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Alignment Overview
Query: NF4086_low_23 (Length: 260)
Name: NF4086_low_23
Description: NF4086
Algorithm: BLASTN 2.2.26 [Sep-21-2011]
Database: JCVI.Medtr.v4.20130313.fasta (1949 entries, 411831487 letters)
| [»] NF4086_low_23 |
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Alignment Details
Target: chr5 (Bit Score: 219; Significance: 1e-120; HSPs: 1)
Name: chr5
Description:
Target: chr5; HSP #1
Raw Score: 219; E-Value: 1e-120
Query Start/End: Original strand, 1 - 244
Target Start/End: Original strand, 38767129 - 38767372
Alignment:
| Q |
1 |
caattagggttaaatgaacgttatgttatgataaaattgcaatgtataaatgatnnnnnnnggaagttagttacgcgtttaagagcatcggaaaatgagt |
100 |
Q |
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| T |
38767129 |
caattagggttaaatgaacgttatgttatgataaaattgcaatgtatatatgataaaaaaaggaagttagttacgcgtttaagagcatcggaaaatgagt |
38767228 |
T |
|
| Q |
101 |
tgggagaatcggagaagagagagtctctaacgaaaagccattcgttccagtttaaccatggaactaattttcgagaatttgatgatgatggtgattttga |
200 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38767229 |
tgggagaatcggagaagagagagtctctaacgaaaagccattcgttccagtttaaccatggaactaattttcgagaatttgatgatgatggtgattttga |
38767328 |
T |
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| Q |
201 |
atcgtcttcgaattctggaacttcgttgaatcctaacggtagtg |
244 |
Q |
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|||||||||||||||||||||||||||||||||||||||||||| |
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| T |
38767329 |
atcgtcttcgaattctggaacttcgttgaatcctaacggtagtg |
38767372 |
T |
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